View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0707_1D_low_6 (Length: 423)

Name: NF0707_1D_low_6
Description: NF0707_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0707_1D_low_6
NF0707_1D_low_6
[»] chr4 (27 HSPs)
chr4 (124-404)||(44692483-44692763)
chr4 (2-124)||(22135097-22135219)
chr4 (5-126)||(56030187-56030308)
chr4 (2-124)||(22132865-22132987)
chr4 (2-126)||(44600306-44600430)
chr4 (2-126)||(47211186-47211310)
chr4 (4-125)||(24347958-24348078)
chr4 (5-124)||(5100743-5100862)
chr4 (5-124)||(14787902-14788021)
chr4 (5-125)||(17662707-17662827)
chr4 (5-108)||(30136331-30136434)
chr4 (2-124)||(10112626-10112744)
chr4 (8-125)||(9022059-9022175)
chr4 (6-124)||(9863499-9863617)
chr4 (23-122)||(19322410-19322510)
chr4 (47-125)||(38890624-38890702)
chr4 (53-124)||(14789500-14789571)
chr4 (41-112)||(38209186-38209257)
chr4 (46-108)||(5516771-5516833)
chr4 (131-215)||(44636412-44636496)
chr4 (170-268)||(44654120-44654217)
chr4 (5-44)||(54929141-54929180)
chr4 (6-44)||(10979676-10979714)
chr4 (41-110)||(29609914-29609983)
chr4 (41-92)||(10979611-10979662)
chr4 (5-44)||(14647175-14647214)
chr4 (43-90)||(54929198-54929245)
[»] chr8 (13 HSPs)
chr8 (2-125)||(3873749-3873872)
chr8 (2-124)||(32339094-32339216)
chr8 (4-124)||(43529871-43529991)
chr8 (2-124)||(608470-608592)
chr8 (2-124)||(28283691-28283813)
chr8 (2-127)||(15808959-15809084)
chr8 (7-124)||(3265635-3265752)
chr8 (5-124)||(41384493-41384612)
chr8 (5-123)||(41382420-41382538)
chr8 (43-112)||(13986304-13986372)
chr8 (43-112)||(30679186-30679254)
chr8 (5-44)||(11701408-11701447)
chr8 (43-72)||(27820149-27820178)
[»] chr7 (41 HSPs)
chr7 (2-124)||(3035415-3035537)
chr7 (2-124)||(7094893-7095015)
chr7 (2-124)||(11756925-11757047)
chr7 (5-124)||(443326-443445)
chr7 (2-125)||(20625733-20625856)
chr7 (2-125)||(20629624-20629747)
chr7 (2-125)||(20642043-20642166)
chr7 (2-124)||(7092646-7092768)
chr7 (2-124)||(20299155-20299277)
chr7 (2-124)||(47865328-47865450)
chr7 (1-126)||(7352123-7352248)
chr7 (3-124)||(7472453-7472574)
chr7 (1-124)||(7349744-7349867)
chr7 (2-124)||(1849665-1849787)
chr7 (2-124)||(7470499-7470621)
chr7 (2-124)||(28487249-28487371)
chr7 (2-124)||(31156378-31156500)
chr7 (2-124)||(38395986-38396108)
chr7 (13-125)||(37412605-37412717)
chr7 (5-124)||(18345237-18345356)
chr7 (2-124)||(1606171-1606293)
chr7 (2-124)||(21470761-21470883)
chr7 (2-124)||(28485261-28485383)
chr7 (2-124)||(38393683-38393805)
chr7 (5-112)||(24258170-24258277)
chr7 (5-126)||(21989851-21989970)
chr7 (5-124)||(42331474-42331593)
chr7 (29-125)||(3676996-3677092)
chr7 (5-126)||(40281871-40281994)
chr7 (9-55)||(13099950-13099996)
chr7 (41-112)||(10690686-10690756)
chr7 (61-112)||(20297110-20297161)
chr7 (2-44)||(43253993-43254035)
chr7 (41-107)||(12310542-12310608)
chr7 (70-111)||(43254023-43254064)
chr7 (46-78)||(6628852-6628884)
chr7 (47-87)||(12485044-12485084)
chr7 (47-87)||(12506475-12506515)
chr7 (46-78)||(12657667-12657699)
chr7 (2-44)||(12484981-12485023)
chr7 (2-44)||(12506412-12506454)
[»] chr5 (22 HSPs)
chr5 (2-124)||(25803707-25803829)
chr5 (2-124)||(27912219-27912341)
chr5 (2-124)||(18468698-18468820)
chr5 (4-124)||(27910135-27910255)
chr5 (5-124)||(26098722-26098841)
chr5 (2-124)||(3373508-3373630)
chr5 (2-124)||(15551925-15552047)
chr5 (5-124)||(26097421-26097540)
chr5 (9-127)||(21288526-21288644)
chr5 (5-122)||(18511683-18511800)
chr5 (5-121)||(18509788-18509904)
chr5 (13-126)||(18596324-18596437)
chr5 (5-117)||(17415781-17415893)
chr5 (2-104)||(10586549-10586651)
chr5 (20-125)||(6661929-6662034)
chr5 (45-124)||(40221282-40221361)
chr5 (41-108)||(5779144-5779211)
chr5 (70-124)||(18466411-18466465)
chr5 (70-125)||(15143219-15143274)
chr5 (2-44)||(18466453-18466495)
chr5 (43-78)||(2532750-2532785)
chr5 (5-44)||(15143262-15143301)
[»] chr3 (23 HSPs)
chr3 (2-124)||(746422-746544)
chr3 (2-124)||(41848804-41848926)
chr3 (2-124)||(25533107-25533229)
chr3 (2-127)||(455570-455695)
chr3 (5-124)||(51943042-51943161)
chr3 (5-124)||(53915963-53916082)
chr3 (2-124)||(457950-458072)
chr3 (2-124)||(10622005-10622127)
chr3 (4-124)||(42991953-42992073)
chr3 (2-128)||(4104361-4104487)
chr3 (5-125)||(1313081-1313201)
chr3 (2-122)||(42989954-42990074)
chr3 (8-126)||(53918134-53918252)
chr3 (5-124)||(27636093-27636212)
chr3 (50-124)||(6561613-6561687)
chr3 (41-112)||(53974124-53974195)
chr3 (41-112)||(11072646-11072717)
chr3 (41-92)||(54287576-54287627)
chr3 (41-112)||(11066257-11066329)
chr3 (5-39)||(53974043-53974077)
chr3 (8-41)||(11066346-11066379)
chr3 (84-125)||(27000082-27000123)
chr3 (5-41)||(54287523-54287559)
[»] chr1 (31 HSPs)
chr1 (2-124)||(39931762-39931884)
chr1 (2-124)||(47905956-47906078)
chr1 (2-125)||(24325346-24325469)
chr1 (5-124)||(48664852-48664971)
chr1 (2-124)||(9463718-9463840)
chr1 (2-124)||(31735993-31736115)
chr1 (8-124)||(9459897-9460013)
chr1 (2-126)||(15295317-15295441)
chr1 (9-124)||(46432521-46432636)
chr1 (5-125)||(17325108-17325228)
chr1 (2-124)||(6115595-6115718)
chr1 (2-124)||(27337410-27337532)
chr1 (4-125)||(2949695-2949816)
chr1 (5-125)||(28998725-28998845)
chr1 (5-125)||(29004441-29004561)
chr1 (5-124)||(45693905-45694024)
chr1 (5-124)||(4131762-4131882)
chr1 (2-95)||(21948661-21948754)
chr1 (2-124)||(27339604-27339730)
chr1 (8-124)||(6997214-6997329)
chr1 (5-124)||(16561131-16561250)
chr1 (5-86)||(6996067-6996148)
chr1 (43-112)||(13785764-13785833)
chr1 (43-112)||(32260748-32260817)
chr1 (5-57)||(13112047-13112099)
chr1 (5-44)||(11693627-11693666)
chr1 (41-87)||(10115509-10115555)
chr1 (46-93)||(16855265-16855312)
chr1 (5-44)||(32260833-32260872)
chr1 (41-112)||(11693680-11693751)
chr1 (2-44)||(13785706-13785748)
[»] chr2 (17 HSPs)
chr2 (2-125)||(35218443-35218566)
chr2 (5-124)||(42923975-42924094)
chr2 (2-124)||(35216062-35216184)
chr2 (2-126)||(42452447-42452571)
chr2 (2-124)||(23452707-23452829)
chr2 (8-124)||(27583791-27583907)
chr2 (2-112)||(28568628-28568738)
chr2 (5-126)||(27136378-27136507)
chr2 (29-117)||(34575608-34575696)
chr2 (49-112)||(28568348-28568411)
chr2 (41-112)||(41303549-41303621)
chr2 (41-108)||(15693589-15693655)
chr2 (5-44)||(15693669-15693708)
chr2 (5-44)||(39286971-39287010)
chr2 (46-87)||(39286911-39286952)
chr2 (60-111)||(7502582-7502633)
chr2 (4-43)||(7502638-7502677)
[»] chr6 (15 HSPs)
chr6 (2-124)||(5275806-5275928)
chr6 (2-127)||(30035074-30035199)
chr6 (2-124)||(2629357-2629479)
chr6 (2-124)||(12195982-12196104)
chr6 (4-124)||(30966923-30967043)
chr6 (2-125)||(18317750-18317873)
chr6 (2-125)||(19705043-19705166)
chr6 (2-125)||(26933036-26933159)
chr6 (5-124)||(22858417-22858536)
chr6 (26-122)||(20526548-20526644)
chr6 (5-126)||(17852265-17852385)
chr6 (5-122)||(17011781-17011895)
chr6 (41-102)||(30445243-30445304)
chr6 (41-112)||(30443024-30443097)
chr6 (5-44)||(30445318-30445357)
[»] scaffold0468 (1 HSPs)
scaffold0468 (9-123)||(2070-2184)
[»] scaffold0154 (1 HSPs)
scaffold0154 (5-125)||(11942-12062)
[»] scaffold0511 (1 HSPs)
scaffold0511 (2-125)||(1734-1857)
[»] scaffold0005 (3 HSPs)
scaffold0005 (5-124)||(51709-51828)
scaffold0005 (53-124)||(50159-50230)
scaffold0005 (5-44)||(170076-170115)
[»] scaffold0133 (1 HSPs)
scaffold0133 (5-124)||(4546-4665)
[»] scaffold0031 (1 HSPs)
scaffold0031 (5-124)||(78883-79002)
[»] scaffold1674 (1 HSPs)
scaffold1674 (30-124)||(1-95)
[»] scaffold0533 (1 HSPs)
scaffold0533 (46-87)||(2232-2273)
[»] scaffold0008 (1 HSPs)
scaffold0008 (5-41)||(57869-57905)


Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 124 - 404
Target Start/End: Complemental strand, 44692763 - 44692483
Alignment:
Q  124 aattccaaaataaattttgcaacaaaattggacttaggatcagatgcttaataacaagagcttgtatattacaagcatccctacatagtttttcgataca 223  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44692763 aattccaaaataaattttgcaacaaaattagacttaggatcagatgcttaataacaagagcttgtatattacaagcatccctacatagtttttcgataca 44692664  T
Q  224 tgtaagacgtaccgtaaggaaaaaggtaggctttcttaaacacttattgacctcttttggagaataattaatgtaaattatgaacagaaactgagcatac 323  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  44692663 tgtaagacgtaccgtaaggaaaaaggtaggctttcttaaacacttattgacctcttttggagaataattcatgtaaattatgaacagaaactgagcatac 44692564  T
Q  324 caagtttaactcatataaatataatagc----aatgttgtggggacatatatctcatggttttaaaataacttaccagcattgat 404  Q
    ||||||||||||||||||||||||||||     |||||||||||||    ||||||||||||||||| |||||||||||||||||    
T  44692563 caagtttaactcatataaatataatagctatatatgttgtggggac----atctcatggttttaaaaaaacttaccagcattgat 44692483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 22135097 - 22135219
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  22135097 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 22135196  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||||| |||||||||||    
T  22135197 aaattttgagtcatactacaaca 22135219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 56030308 - 56030187
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  56030308 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaa 56030209  T
Q  105 ttttgagtgatactacaacaat 126  Q
    |||||||| |||||||||||||    
T  56030208 ttttgagtcatactacaacaat 56030187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 22132865 - 22132987
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  22132865 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 22132964  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||| | |||||||||||    
T  22132965 aaattttgaatcatactacaaca 22132987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 44600306 - 44600430
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  44600306 cgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 44600405  T
Q  102 aaattttgagtgatactacaacaat 126  Q
    || |||||||| |||||||||||||    
T  44600406 aatttttgagtcatactacaacaat 44600430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 47211186 - 47211310
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  47211186 cgatacaaaaatatatttattgtccataaatatattttgagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 47211285  T
Q  102 aaattttgagtgatactacaacaat 126  Q
    ||||||| ||| |||||||||||||    
T  47211286 aaattttaagtcatactacaacaat 47211310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 4 - 125
Target Start/End: Complemental strand, 24348078 - 24347958
Alignment:
Q  4 atacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaa 103  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  24348078 atacaaaaatatatttattgtccataaatatattttc-gcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaa 24347980  T
Q  104 attttgagtgatactacaacaa 125  Q
    ||||||||| ||||||||||||    
T  24347979 attttgagtcatactacaacaa 24347958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 5100862 - 5100743
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||    
T  5100862 tacaaaaatatatttgttgtccataaatatattttcagcacaaaatatatttaaaacaaatcttttatatttttagcaacaatattctccatccatcaaa 5100763  T
Q  105 ttttgagtgatactacaaca 124  Q
    |||||||| |||||||||||    
T  5100762 ttttgagtcatactacaaca 5100743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 14787902 - 14788021
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||    
T  14787902 tacaaaaatatatttattgtccataaatatattttcaccacaaaatatatttgaaacaaatcttttatatttttagcaacattattctccatccatcaaa 14788001  T
Q  105 ttttgagtgatactacaaca 124  Q
    |||||||| |||||||||||    
T  14788002 ttttgagtcatactacaaca 14788021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 17662707 - 17662827
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||    
T  17662707 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttaaaacaaatcttttatatttttagcaacaatattctccatccatcaaa 17662806  T
Q  105 ttttgagtgatactacaacaa 125  Q
    |||  ||| ||||||||||||    
T  17662807 tttgtagtcatactacaacaa 17662827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 30136434 - 30136331
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||  |||||||    
T  30136434 tacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccattcatcaaa 30136335  T
Q  105 tttt 108  Q
    ||||    
T  30136334 tttt 30136331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 10112744 - 10112626
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    |||||||||||| |||||||||||||| ||  || |    
T  10112744 cgatacaaaaatatatttattgtccataaatatagtttcagcacaaaatatatttgaaac----cttttatatttttagcaacaatattcttcattcaac 10112649  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||| ||| |||||||||||    
T  10112648 aaattttaagtcatactacaaca 10112626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 9022175 - 9022059
Alignment:
Q  8 aaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattt 107  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||   || |||| ||||||    
T  9022175 aaaaatatatttattgtc-ataaatatattttcagcaaaaaatatatttgaaacaaatcatttatattttcaacaacaatatttctcatccataaaattt 9022077  T
Q  108 tgagtgatactacaacaa 125  Q
    ||| | ||||||||||||    
T  9022076 tgaatcatactacaacaa 9022059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 6 - 124
Target Start/End: Complemental strand, 9863617 - 9863499
Alignment:
Q  6 acaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaat 105  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| |||||||||| || ||||||||  | || ||| |||||    
T  9863617 acaaaaatatatttattgttcataaatatatttttagcacaaaatatgtttgaaacaaatcatttatatttttagtaacaatatatttcatccaacaaat 9863518  T
Q  106 tttgagtgatactacaaca 124  Q
    ||||||| ||| |||||||    
T  9863517 tttgagtcatattacaaca 9863499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 19322510 - 19322410
Alignment:
Q  23 gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagc-aacaatattctccaaccatcaaattttgagtgatactaca 121  Q
    |||||||||||||||||||| | ||||||||||| |||||||||||||||||||| ||| || ||||||||||| |||||||||||||||| ||||||||    
T  19322510 gtccataaatatattttcagtataaaatatatttaaaacaaatcttttatatttttagcaaaaaatattctccatccatcaaattttgagtcatactaca 19322411  T
Q  122 a 122  Q
    |    
T  19322410 a 19322410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 38890624 - 38890702
Alignment:
Q  47 aaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaa 125  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| || |||||||||    
T  38890624 aaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatgctacaacaa 38890702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 124
Target Start/End: Original strand, 14789500 - 14789571
Alignment:
Q  53 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 124  Q
    ||||||||||||||||||||||||| ||||||| |||||| || |||||||||||||||| |||||||||||    
T  14789500 atttgaaacaaatcttttatatttttagcaacattattcttcatccatcaaattttgagtcatactacaaca 14789571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 38209186 - 38209257
Alignment:
Q  41 agcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagt 112  Q
    |||||||||||||||| |||||||||||||||||||| | |||||||||| | || ||||||||||||||||    
T  38209186 agcacaaaatatatttaaaacaaatcttttatatttttaacaacaatatttttcatccatcaaattttgagt 38209257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 46 - 108
Target Start/End: Original strand, 5516771 - 5516833
Alignment:
Q  46 aaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaatttt 108  Q
    |||||||||||||||||| || |||||||||| |||||||||||||||||  |||||||||||    
T  5516771 aaaatatatttgaaacaattcatttatatttttagcaacaatattctccattcatcaaatttt 5516833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 44636412 - 44636496
Alignment:
Q  131 aaataaattttgcaacaaaattggacttaggatcagatgcttaataacaagagcttgtatattacaagcatccctacatagtttt 215  Q
    |||||| ||||||||||||||| || ||||||||| || ||||||||  ||| ||||||||||||||| |||||  |||||||||    
T  44636412 aaataatttttgcaacaaaattagatttaggatcaaatacttaataattagaacttgtatattacaagtatccccgcatagtttt 44636496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 170 - 268
Target Start/End: Complemental strand, 44654217 - 44654120
Alignment:
Q  170 cttaataacaagagcttgtatattacaagcatccctacatagtttttcgatacatgtaagacgtaccgtaaggaaaaaggtaggctttcttaaacactt 268  Q
    |||||||| |||||||||||||||| ||||||||   ||||| ||||| ||||||| | |||| ||||| ||||||| ||||||| |||| ||||||||    
T  44654217 cttaataataagagcttgtatattaaaagcatcctctcatag-ttttcaatacatgcatgacgaaccgtgaggaaaagggtaggcattctcaaacactt 44654120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 54929141 - 54929180
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagca 44  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  54929141 tacaaaaatatattttttgtccataaatatattttcagca 54929180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 10979714 - 10979676
Alignment:
Q  6 acaaaaatatatttattgtccataaatatattttcagca 44  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  10979714 acaaaaatatatttgttgtccataaatatattttcagca 10979676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 41 - 110
Target Start/End: Original strand, 29609914 - 29609983
Alignment:
Q  41 agcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttga 110  Q
    |||||||||||||||||||| |||||    ||| ||| |||||||||||||| || ||||||||||||||    
T  29609914 agcacaaaatatatttgaaaaaaatcaagaatacttttagcaacaatattcttcatccatcaaattttga 29609983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 10979662 - 10979611
Alignment:
Q  41 agcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattct 92  Q
    |||||||||||||||||||  ||||||||||||||||||  |||||| ||||    
T  10979662 agcacaaaatatatttgaagtaaatcttttatattttcattaacaatcttct 10979611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 14647175 - 14647214
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagca 44  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  14647175 tacaaaaatatatttgttgtccatgaatatattttcagca 14647214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 54929198 - 54929245
Alignment:
Q  43 cacaaaatatatttgaaacaaatcttttatattttcagcaacaatatt 90  Q
    ||||||||| |||| || ||||||||||||||||| ||||||||||||    
T  54929198 cacaaaatacatttaaatcaaatcttttatatttttagcaacaatatt 54929245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 2e-56; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 2 - 125
Target Start/End: Complemental strand, 3873872 - 3873749
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  3873872 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 3873773  T
Q  102 aaattttgagtgatactacaacaa 125  Q
    ||||||||||| ||||||||||||    
T  3873772 aaattttgagtcatactacaacaa 3873749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 32339216 - 32339094
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  32339216 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 32339117  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||||| |||||||||||    
T  32339116 aaattttgagtcatactacaaca 32339094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 43529991 - 43529871
Alignment:
Q  4 atacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaa 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  43529991 atacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaa 43529892  T
Q  104 attttgagtgatactacaaca 124  Q
    ||||||||| |||||||||||    
T  43529891 attttgagtcatactacaaca 43529871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 608592 - 608470
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |  |||||    
T  608592 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatc 608493  T
Q  102 aaattttgagtgatactacaaca 124  Q
    |||||||||||||||||||||||    
T  608492 aaattttgagtgatactacaaca 608470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 28283691 - 28283813
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||    
T  28283691 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaaaatattctccatccatc 28283790  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||||| |||||||||||    
T  28283791 aaattttgagtcatactacaaca 28283813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 15809084 - 15808959
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  15809084 cgatacaaaaatatatttattgtccataaatatattttcaacacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 15808985  T
Q  102 aaattttgagtgatactacaacaatt 127  Q
    ||||||||||| |||||| |||||||    
T  15808984 aaattttgagtcatactaaaacaatt 15808959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 3265635 - 3265752
Alignment:
Q  7 caaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaatt 106  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  3265635 caaacatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatt 3265734  T
Q  107 ttgagtgatactacaaca 124  Q
    |||||| |||||||||||    
T  3265735 ttgagtcatactacaaca 3265752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 41384612 - 41384493
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  41384612 tacaaaaatatatttattgtccataaatatattttcagtataaaatatattcgaaacaaatcttttatatttttagcaacaatattctccatccatcaaa 41384513  T
Q  105 ttttgagtgatactacaaca 124  Q
    |||||||| |||||||||||    
T  41384512 ttttgagtcatactacaaca 41384493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 5 - 123
Target Start/End: Complemental strand, 41382538 - 41382420
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  41382538 tacaaaaatatatttattgtccataaatatattttcagtataaaatatattcgaaacaaatcttttatatttttaacaacaatattctccatccatcaaa 41382439  T
Q  105 ttttgagtgatactacaac 123  Q
    |||||||| ||||||||||    
T  41382438 ttttgagtcatactacaac 41382420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 13986304 - 13986372
Alignment:
Q  43 cacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagt 112  Q
    |||||||||||||| |||||||||||| ||||||| ||||||||| |||| || |||| |||||||||||    
T  13986304 cacaaaatatatttaaaacaaatcttt-atatttttagcaacaatcttcttcatccataaaattttgagt 13986372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 30679186 - 30679254
Alignment:
Q  43 cacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagt 112  Q
    |||||||||||| | ||||||||||||| |||||| | |||| ||||||| || ||||||||||||||||    
T  30679186 cacaaaatatatctaaaacaaatcttttttatttttaccaac-atattcttcatccatcaaattttgagt 30679254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 11701408 - 11701447
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagca 44  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  11701408 tacaaaaatatatttactgaccataaatatattttcagca 11701447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 72
Target Start/End: Original strand, 27820149 - 27820178
Alignment:
Q  43 cacaaaatatatttgaaacaaatcttttat 72  Q
    ||||||||||||||||||||||||||||||    
T  27820149 cacaaaatatatttgaaacaaatcttttat 27820178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 7e-56; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 3035537 - 3035415
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  3035537 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 3035438  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||||| |||||||||||    
T  3035437 aaattttgagtcatactacaaca 3035415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 7094893 - 7095015
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  7094893 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 7094992  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||||| |||||||||||    
T  7094993 aaattttgagtcatactacaaca 7095015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 11757047 - 11756925
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  11757047 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 11756948  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||||| |||||||||||    
T  11756947 aaattttgagtcatactacaaca 11756925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 443445 - 443326
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  443445 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaa 443346  T
Q  105 ttttgagtgatactacaaca 124  Q
    |||||||| |||||||||||    
T  443345 ttttgagtcatactacaaca 443326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 2 - 125
Target Start/End: Complemental strand, 20625856 - 20625733
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  20625856 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 20625757  T
Q  102 aaattttgagtgatactacaacaa 125  Q
    ||||||||||| |||||| |||||    
T  20625756 aaattttgagtcatactagaacaa 20625733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 2 - 125
Target Start/End: Complemental strand, 20629747 - 20629624
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  20629747 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 20629648  T
Q  102 aaattttgagtgatactacaacaa 125  Q
    ||||||||||| |||||| |||||    
T  20629647 aaattttgagtcatactagaacaa 20629624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 2 - 125
Target Start/End: Complemental strand, 20642166 - 20642043
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  20642166 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 20642067  T
Q  102 aaattttgagtgatactacaacaa 125  Q
    ||||||||||| |||||| |||||    
T  20642066 aaattttgagtcatactagaacaa 20642043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 7092646 - 7092768
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  7092646 cgatacaaaaatatatttattgtccataaatatatcttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 7092745  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||||| |||||||||||    
T  7092746 aaattttgagtcatactacaaca 7092768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 20299277 - 20299155
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||    
T  20299277 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaataaatcttttatatttttagcaacaatattctccatccatc 20299178  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||||| |||||||||||    
T  20299177 aaattttgagtcatactacaaca 20299155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 47865450 - 47865328
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  47865450 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 47865351  T
Q  102 aaattttgagtgatactacaaca 124  Q
    |||||| |||| |||||||||||    
T  47865350 aaatttggagtcatactacaaca 47865328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 7352123 - 7352248
Alignment:
Q  1 gcgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  7352123 gcgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccat 7352222  T
Q  101 caaattttgagtgatactacaacaat 126  Q
    ||| |||||||| |||||||||||||    
T  7352223 caatttttgagtcatactacaacaat 7352248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 7472453 - 7472574
Alignment:
Q  3 gatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatca 102  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  7472453 gatacaataatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatca 7472552  T
Q  103 aattttgagtgatactacaaca 124  Q
    |||||||||| |||||||||||    
T  7472553 aattttgagtcatactacaaca 7472574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 7349744 - 7349867
Alignment:
Q  1 gcgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  7349744 gcgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccat 7349843  T
Q  101 caaattttgagtgatactacaaca 124  Q
    ||| |||||||| |||||||||||    
T  7349844 caatttttgagtcatactacaaca 7349867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 1849787 - 1849665
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |  |||||    
T  1849787 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatc 1849688  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||||| |||||||||||    
T  1849687 aaattttgagtcatactacaaca 1849665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 7470499 - 7470621
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||| |||||    
T  7470499 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatgttttatatttttagcaataatattctccatccatc 7470598  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||||| |||||||||||    
T  7470599 aaattttgagtcatactacaaca 7470621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 28487371 - 28487249
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||    
T  28487371 cgatacaaaattatatttattgtccataaatatattttcagcacaaaatatatttgaagcaaatcttttatatttttagcaacaatattctccatccatc 28487272  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||||| |||||||||||    
T  28487271 aaattttgagtcatactacaaca 28487249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 31156378 - 31156500
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  31156378 cgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 31156477  T
Q  102 aaattttgagtgatactacaaca 124  Q
    || |||||||| |||||||||||    
T  31156478 aatttttgagtcatactacaaca 31156500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 38396108 - 38395986
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  38396108 cgatacaaaaatatatttattgtacataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 38396009  T
Q  102 aaattttgagtgatactacaaca 124  Q
    |||||| |||| |||||||||||    
T  38396008 aaatttggagtcatactacaaca 38395986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 37412605 - 37412717
Alignment:
Q  13 tatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  37412605 tatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagt 37412704  T
Q  113 gatactacaacaa 125  Q
     ||||||||||||    
T  37412705 catactacaacaa 37412717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 18345356 - 18345237
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  18345356 tacaaaaatatatttattgtcaataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaa 18345257  T
Q  105 ttttgagtgatactacaaca 124  Q
    |||||||| |||||||||||    
T  18345256 ttttgagtcatactacaaca 18345237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 1606293 - 1606171
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |  |||||    
T  1606293 cgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatc 1606194  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||||| |||||||||||    
T  1606193 aaattttgagtcatactacaaca 1606171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 21470761 - 21470883
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  21470761 cgatataaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 21470860  T
Q  102 aaattttgagtgatactacaaca 124  Q
    |||||| |||| | |||||||||    
T  21470861 aaatttggagtcaaactacaaca 21470883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 28485383 - 28485261
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| || |||||    
T  28485383 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatattttatatttttagcaacaatattcttcatccatc 28485284  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||| | |||||||||||    
T  28485283 aaattttgaatcatactacaaca 28485261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 38393805 - 38393683
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||    
T  38393805 cgatacaaaaatatatttattgtccataaataaattttcagcacaaaatatatttgaaacaaatcttatatatttttagcaacaatattctccatccatc 38393706  T
Q  102 aaattttgagtgatactacaaca 124  Q
    |||||| || | |||||||||||    
T  38393705 aaatttagaatcatactacaaca 38393683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 5 - 112
Target Start/End: Complemental strand, 24258277 - 24258170
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |  ||||||||    
T  24258277 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatcaaa 24258178  T
Q  105 ttttgagt 112  Q
    ||||||||    
T  24258177 ttttgagt 24258170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 21989970 - 21989851
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    ||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  21989970 tacaaaaatatatttattgtccataaatatattttcaacacaa--tatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaa 21989873  T
Q  105 ttttgagtgatactacaacaat 126  Q
    ||||| || |||||||||||||    
T  21989872 ttttgggtcatactacaacaat 21989851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 42331474 - 42331593
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||  |||||||    
T  42331474 tacaaaaatatacttattgtccataaatatattttcagcacaaaatatatttaaaacaaatcttttatatttttagcaacaatattcttcattcatcaaa 42331573  T
Q  105 ttttgagtgatactacaaca 124  Q
    |||| ||| |||||||||||    
T  42331574 ttttaagtcatactacaaca 42331593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 3677092 - 3676996
Alignment:
Q  29 aaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaa 125  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||| ||||||||||||    
T  3677092 aaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatctatcaaattttgagtcatactacaacaa 3676996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 40281871 - 40281994
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaa--tattctccaaccatca 102  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||  | |||| || ||||||    
T  40281871 tacaaaaatatatttattttccataaatatattttcaacacaaaatatatttgaaacaaatattttatatttttagcaacaaattcttcttcatccatca 40281970  T
Q  103 aattttgagtgatactacaacaat 126  Q
    |||||||||| |||||||| ||||    
T  40281971 aattttgagtcatactacaccaat 40281994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 13099950 - 13099996
Alignment:
Q  9 aaaatatatttattgtccataaatatattttcagcacaaaatatatt 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  13099950 aaaatatatttattgtccataaatatattttcagcacaaaatatatt 13099996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 41 - 112
Target Start/End: Complemental strand, 10690756 - 10690686
Alignment:
Q  41 agcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagt 112  Q
    |||||||||||||||||||||| | |||||||||||| ||||||||| ||||||  ||||||||||||||||    
T  10690756 agcacaaaatatatttgaaacata-cttttatatttttagcaacaatcttctccctccatcaaattttgagt 10690686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 61 - 112
Target Start/End: Complemental strand, 20297161 - 20297110
Alignment:
Q  61 caaatcttttatattttcagcaacaatattctccaaccatcaaattttgagt 112  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  20297161 caaatcttttatatttttagcaacaatattctccatccatcaaattttgagt 20297110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 43253993 - 43254035
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagca 44  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  43253993 cgatacaaaaatatatttattgtccataaatatatttttagca 43254035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 12310542 - 12310608
Alignment:
Q  41 agcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattt 107  Q
    ||||||||||||||||||||||||||||||||||    ||||||||| |||| || |||| ||||||    
T  12310542 agcacaaaatatatttgaaacaaatcttttatatcagtagcaacaatcttcttcatccattaaattt 12310608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 43254023 - 43254064
Alignment:
Q  70 tatattttcagcaacaatattctccaaccatcaaattttgag 111  Q
    |||||||| ||||||||||||||||| |||||||||||||||    
T  43254023 tatatttttagcaacaatattctccatccatcaaattttgag 43254064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 6628884 - 6628852
Alignment:
Q  46 aaaatatatttgaaacaaatcttttatattttc 78  Q
    |||||||||||||||||||||||||||||||||    
T  6628884 aaaatatatttgaaacaaatcttttatattttc 6628852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 12485044 - 12485084
Alignment:
Q  47 aaatatatttgaaacaaatcttttatattttcagcaacaat 87  Q
    ||||||||||||||||||||||||||||||||  |||||||    
T  12485044 aaatatatttgaaacaaatcttttatattttctacaacaat 12485084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 12506475 - 12506515
Alignment:
Q  47 aaatatatttgaaacaaatcttttatattttcagcaacaat 87  Q
    ||||||||||||||||||||||||||||||||  |||||||    
T  12506475 aaatatatttgaaacaaatcttttatattttctacaacaat 12506515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 78
Target Start/End: Original strand, 12657667 - 12657699
Alignment:
Q  46 aaaatatatttgaaacaaatcttttatattttc 78  Q
    |||||||||||||||||||||||||||||||||    
T  12657667 aaaatatatttgaaacaaatcttttatattttc 12657699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 12484981 - 12485023
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagca 44  Q
    ||||||||||||||||||  | |||||||||||||||||||||    
T  12484981 cgatacaaaaatatatttgctatccataaatatattttcagca 12485023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 12506412 - 12506454
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagca 44  Q
    ||||||||||||||||||  | |||||||||||||||||||||    
T  12506412 cgatacaaaaatatatttgctatccataaatatattttcagca 12506454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 111; Significance: 7e-56; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 25803829 - 25803707
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  25803829 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 25803730  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||||| |||||||||||    
T  25803729 aaattttgagtcatactacaaca 25803707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 27912341 - 27912219
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  27912341 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 27912242  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||||| |||||||||||    
T  27912241 aaattttgagtcatactacaaca 27912219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 18468820 - 18468698
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||    
T  18468820 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaaaaatattctccatccatc 18468721  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||||| |||||||||||    
T  18468720 aaattttgagtcatactacaaca 18468698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 27910255 - 27910135
Alignment:
Q  4 atacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaa 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||    
T  27910255 atacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaataatattctccatccatcaa 27910156  T
Q  104 attttgagtgatactacaaca 124  Q
    ||||||||| |||||||||||    
T  27910155 attttgagtcatactacaaca 27910135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 26098722 - 26098841
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||    
T  26098722 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaataatattctccatccatcaaa 26098821  T
Q  105 ttttgagtgatactacaaca 124  Q
    |||||||| |||||||||||    
T  26098822 ttttgagtcatactacaaca 26098841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 3373508 - 3373630
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  3373508 cgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 3373607  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||| ||||| |||||||||||    
T  3373608 aaattctgagtcatactacaaca 3373630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 15552047 - 15551925
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  15552047 cgatacaaaaatatatttattgtccataaatatatcttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 15551948  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||||| |||||||||||    
T  15551947 aaattttgagtcatactacaaca 15551925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 26097540 - 26097421
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||    
T  26097540 tacaaaaatatatttattgtccataaatatattttcagtacaaaatatatttgaaacaaattttttatatttttagcaacaatattctccatccatcaaa 26097441  T
Q  105 ttttgagtgatactacaaca 124  Q
    |||||||| |||||||||||    
T  26097440 ttttgagtcatactacaaca 26097421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 21288644 - 21288526
Alignment:
Q  9 aaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaatttt 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||| ||||||||||||    
T  21288644 aaaatatatttattgtccataaatatattttcagcacaaaatatattttaaacaaatcttttttatttttagcaacaatattctccatccatcaaatttt 21288545  T
Q  109 gagtgatactacaacaatt 127  Q
    |||| ||||||||||||||    
T  21288544 gagttatactacaacaatt 21288526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 18511683 - 18511800
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| || ||||||||    
T  18511683 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatattcgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaa 18511782  T
Q  105 ttttgagtgatactacaa 122  Q
    |||||||| |||||||||    
T  18511783 ttttgagtcatactacaa 18511800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 18509788 - 18509904
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||| ||||||||    
T  18509788 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatattcgaaataaatcttttatatttttagcaacaatattctccatccatcaaa 18509887  T
Q  105 ttttgagtgatactaca 121  Q
    |||||||| ||||||||    
T  18509888 ttttgagtcatactaca 18509904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 18596437 - 18596324
Alignment:
Q  13 tatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagt 112  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  18596437 tatatttattgtccataaatatattttcaacacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagt 18596338  T
Q  113 gatactacaacaat 126  Q
     ||| |||||||||    
T  18596337 catagtacaacaat 18596324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 17415781 - 17415893
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||    
T  17415781 tacaaaaatatatttattgtccataaatatattttcagcaaaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaa 17415880  T
Q  105 ttttgagtgatac 117  Q
    |||||||| ||||    
T  17415881 ttttgagtcatac 17415893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 10586651 - 10586549
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||    
T  10586651 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattccccatccatc 10586552  T
Q  102 aaa 104  Q
    |||    
T  10586551 aaa 10586549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 6661929 - 6662034
Alignment:
Q  20 attgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatacta 119  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| || ||||||| |||| ||| ||||||    
T  6661929 attgtccataaatatattttcaacacaaaatatatttgaaacaaatattttatatttttagcaacaatattcttcatccatcaagttttaagtcatacta 6662028  T
Q  120 caacaa 125  Q
    ||||||    
T  6662029 caacaa 6662034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 40221361 - 40221282
Alignment:
Q  45 caaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 124  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| || | || ||||||||||| |||||||||||    
T  40221361 caaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatcaattaaattttgagtcatactacaaca 40221282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 5779144 - 5779211
Alignment:
Q  41 agcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaatttt 108  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||| |||| || | ||||||||||    
T  5779144 agcacaaaatatatttgaaacaaatcttttatatttttagcaataatcttcttcatctatcaaatttt 5779211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 70 - 124
Target Start/End: Complemental strand, 18466465 - 18466411
Alignment:
Q  70 tatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 124  Q
    |||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  18466465 tatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 18466411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 15143274 - 15143219
Alignment:
Q  70 tatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaacaa 125  Q
    |||||||| ||||||||||||||||| |||||||||||||||| |||||| |||||    
T  15143274 tatatttttagcaacaatattctccatccatcaaattttgagtcatactataacaa 15143219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 18466495 - 18466453
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagca 44  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  18466495 cgatacaaaaatatatttattgtccataaatatatttttagca 18466453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 43 - 78
Target Start/End: Original strand, 2532750 - 2532785
Alignment:
Q  43 cacaaaatatatttgaaacaaatcttttatattttc 78  Q
    ||||| ||||||||||||||||||||||||||||||    
T  2532750 cacaagatatatttgaaacaaatcttttatattttc 2532785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 15143301 - 15143262
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagca 44  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  15143301 tacaaaaatgtatttattgtccataaatatatttttagca 15143262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 7e-56; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 746544 - 746422
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  746544 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 746445  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||||| |||||||||||    
T  746444 aaattttgagtcatactacaaca 746422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 41848926 - 41848804
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  41848926 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 41848827  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||||| |||||||||||    
T  41848826 aaattttgagtcatactacaaca 41848804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 25533229 - 25533107
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  25533229 cgatacaaaaatatatttattgtccataaatatattttcagcaaaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 25533130  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||||| |||||||||||    
T  25533129 aaattttgagtcatactacaaca 25533107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 455695 - 455570
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||    
T  455695 cgatacaaaaatatatttattgtccacaaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattccccatccatc 455596  T
Q  102 aaattttgagtgatactacaacaatt 127  Q
    ||||||||||| ||||||||||||||    
T  455595 aaattttgagtcatactacaacaatt 455570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 51943161 - 51943042
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||    
T  51943161 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaa 51943062  T
Q  105 ttttgagtgatactacaaca 124  Q
    |||||||| |||||||||||    
T  51943061 ttttgagtcatactacaaca 51943042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 53915963 - 53916082
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||    
T  53915963 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccctcaaa 53916062  T
Q  105 ttttgagtgatactacaaca 124  Q
    |||||||| |||||||||||    
T  53916063 ttttgagtcatactacaaca 53916082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 458072 - 457950
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||    
T  458072 cgatacaaaaatatatttattgtccacaaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattccccatccatc 457973  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||||| |||||||||||    
T  457972 aaattttgagtcatactacaaca 457950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 10622005 - 10622127
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  10622005 cgatacaaaaatatatttattgtccataaatatatcttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 10622104  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||||| |||||||||||    
T  10622105 aaattttgagtcatactacaaca 10622127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 42992073 - 42991953
Alignment:
Q  4 atacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaa 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||| |||||||    
T  42992073 atacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaaccttttatatttttaacaacaatattctccatccatcaa 42991974  T
Q  104 attttgagtgatactacaaca 124  Q
    ||||||||| |||||||||||    
T  42991973 attttgagtcatactacaaca 42991953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 4104361 - 4104487
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||| |  |||||    
T  4104361 cgatacaaaaatatatttattgtccataaatatattttcagcataaagtatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatc 4104460  T
Q  102 aaattttgagtgatactacaacaattc 128  Q
    ||||||||||| |||||||||||||||    
T  4104461 aaattttgagtcatactacaacaattc 4104487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 1313201 - 1313081
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||    
T  1313201 tacagaaatatatttattgtccataaatatattttcaacacaaaatatatttgaaacaaatcatttatatttttagcaacaatattctccatccatcaaa 1313102  T
Q  105 ttttgagtgatactacaacaa 125  Q
    |||||||| ||||||||||||    
T  1313101 ttttgagtcatactacaacaa 1313081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 42990074 - 42989954
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  42990074 cgatacaaaaatatatttattgtccataaatatactttcagcaaaaaatatatttgaaacaaattttttatatttttagcaacaatattctccatccatc 42989975  T
Q  102 aaattttgagtgatactacaa 122  Q
    ||||||||||| |||||||||    
T  42989974 aaattttgagtcatactacaa 42989954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 53918134 - 53918252
Alignment:
Q  8 aaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattt 107  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  53918134 aaaaatatatttattgtccataaatatatgttcaacacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattt 53918233  T
Q  108 tgagtgatactacaacaat 126  Q
    ||||| |||||| ||||||    
T  53918234 tgagtcatactataacaat 53918252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 27636093 - 27636212
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||| ||||||||    
T  27636093 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaactaatattttatatttttagcaacaatattctccatccatcaaa 27636192  T
Q  105 ttttgagtgatactacaaca 124  Q
    |||| | | |||||||||||    
T  27636193 ttttaaatcatactacaaca 27636212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 6561687 - 6561613
Alignment:
Q  50 tatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 124  Q
    |||||||||||||||||||||||||||| |||||||||||||| || ||||||||||| |||| |||||||||||    
T  6561687 tatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaatttcgagtcatactacaaca 6561613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 53974124 - 53974195
Alignment:
Q  41 agcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagt 112  Q
    ||||||||||||| ||||||||||||||||||||||| | |||||| ||||| || ||||||||||||||||    
T  53974124 agcacaaaatataattgaaacaaatcttttatatttttaacaacaacattcttcatccatcaaattttgagt 53974195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 41 - 112
Target Start/End: Complemental strand, 11072717 - 11072646
Alignment:
Q  41 agcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagt 112  Q
    ||||||| |||||||||||||||||| ||||||||||  |||||||| |||| || ||||||||||||||||    
T  11072717 agcacaagatatatttgaaacaaatcatttatattttttgcaacaatcttcttcatccatcaaattttgagt 11072646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 54287576 - 54287627
Alignment:
Q  41 agcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattct 92  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||| ||||    
T  54287576 agcacgaaatatatttgaaacaaatcttttatatttttagcaacaatcttct 54287627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 112
Target Start/End: Complemental strand, 11066329 - 11066257
Alignment:
Q  41 agcacaaaatatatttgaaacaaatcttttat-attttcagcaacaatattctccaaccatcaaattttgagt 112  Q
    ||||||| |||||||||||||||||| |||||  |||| |||||||||||||| || |||||||||| |||||    
T  11066329 agcacaagatatatttgaaacaaatcatttatcttttttagcaacaatattcttcatccatcaaattatgagt 11066257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 53974043 - 53974077
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatatttt 39  Q
    ||||||||||||||||||||| |||||||||||||    
T  53974043 tacaaaaatatatttattgtctataaatatatttt 53974077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 11066379 - 11066346
Alignment:
Q  8 aaaaatatatttattgtccataaatatattttca 41  Q
    ||||||||||||||||||||||||| ||||||||    
T  11066379 aaaaatatatttattgtccataaatgtattttca 11066346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 27000123 - 27000082
Alignment:
Q  84 caatattctccaaccatcaaattttgagtgatactacaacaa 125  Q
    |||||||||||| |||||||||||| ||| ||||||||||||    
T  27000123 caatattctccatccatcaaattttcagtcatactacaacaa 27000082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 54287523 - 54287559
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttca 41  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  54287523 tacaaaaatgtatttattatccataaatatattttca 54287559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 7e-56; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 39931884 - 39931762
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  39931884 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 39931785  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||||| |||||||||||    
T  39931784 aaattttgagtcatactacaaca 39931762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 47906078 - 47905956
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  47906078 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 47905979  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||||| |||||||||||    
T  47905978 aaattttgagtcatactacaaca 47905956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 2 - 125
Target Start/End: Complemental strand, 24325469 - 24325346
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  24325469 cgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 24325370  T
Q  102 aaattttgagtgatactacaacaa 125  Q
    ||||||||||| ||||||||||||    
T  24325369 aaattttgagtcatactacaacaa 24325346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 48664971 - 48664852
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  48664971 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaa 48664872  T
Q  105 ttttgagtgatactacaaca 124  Q
    |||||||| |||||||||||    
T  48664871 ttttgagtcatactacaaca 48664852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 9463718 - 9463840
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  9463718 cgatataaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 9463817  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||||| |||||||||||    
T  9463818 aaattttgagtcatactacaaca 9463840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 31735993 - 31736115
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||    
T  31735993 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccttccatc 31736092  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||||| |||||||||||    
T  31736093 aaattttgagtcatactacaaca 31736115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 9459897 - 9460013
Alignment:
Q  8 aaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattt 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  9459897 aaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattt 9459996  T
Q  108 tgagtgatactacaaca 124  Q
    ||||| |||||||||||    
T  9459997 tgagtcatactacaaca 9460013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 15295317 - 15295441
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |  |||||    
T  15295317 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatc 15295416  T
Q  102 aaattttgagtgatactacaacaat 126  Q
    ||||||||||| |||||||||||||    
T  15295417 aaattttgagtcatactacaacaat 15295441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 46432521 - 46432636
Alignment:
Q  9 aaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaatttt 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  46432521 aaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttt 46432620  T
Q  109 gagtgatactacaaca 124  Q
    |||| |||||||||||    
T  46432621 gagtcatactacaaca 46432636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 17325108 - 17325228
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  17325108 tacaaaaatatatttattgtccataaatatattttcaactcaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaa 17325207  T
Q  105 ttttgagtgatactacaacaa 125  Q
    |||||||| ||||||||||||    
T  17325208 ttttgagtcatactacaacaa 17325228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 6115595 - 6115718
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  6115595 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 6115694  T
Q  102 aaa-ttttgagtgatactacaaca 124  Q
    ||| |||||||| || ||||||||    
T  6115695 aaatttttgagtcatcctacaaca 6115718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 27337410 - 27337532
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||| |||||    
T  27337410 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttatatatttttagcaacaatattccccatccatc 27337509  T
Q  102 aaattttgagtgatactacaaca 124  Q
    |||||| |||| |||||||||||    
T  27337510 aaatttggagtcatactacaaca 27337532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 2949695 - 2949816
Alignment:
Q  4 atacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaa 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||| ||    
T  2949695 atacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatgaa 2949794  T
Q  104 attttgagtgatactacaacaa 125  Q
    ||||||||| |||||| |||||    
T  2949795 attttgagtcatactataacaa 2949816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 28998725 - 28998845
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||| ||||||||    
T  28998725 tacaaaaatgtatttattgtccataaatatattttcagcacaaaatatattttaaacaaatcttttatagttttagcaacaatattctccatccatcaaa 28998824  T
Q  105 ttttgagtgatactacaacaa 125  Q
    |||||||| ||||||||||||    
T  28998825 ttttgagtcatactacaacaa 28998845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 29004441 - 29004561
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||| ||||||||    
T  29004441 tacaaaaatgtatttattgtccataaatatattttcagcacaaaatatattttaaacaaatcttttatagttttagcaacaatattctccatccatcaaa 29004540  T
Q  105 ttttgagtgatactacaacaa 125  Q
    |||||||| ||||||||||||    
T  29004541 ttttgagtcatactacaacaa 29004561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 45693905 - 45694024
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  45693905 tacaaaaatatatttattgtccataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaa 45694004  T
Q  105 ttttgagtgatactacaaca 124  Q
    |||||| | ||| |||||||    
T  45694005 ttttgaatcatagtacaaca 45694024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 4131762 - 4131882
Alignment:
Q  5 tacaaaaatatatttatt-gtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaa 103  Q
    |||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  4131762 tacaaaaatatatttatttgtccataaatatatgttcaacacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaa 4131861  T
Q  104 attttgagtgatactacaaca 124  Q
    ||||||||| |||||||||||    
T  4131862 attttgagtcatactacaaca 4131882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 21948661 - 21948754
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctcca 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21948661 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctcca 21948754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 27339604 - 27339730
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatat----attttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaac 97  Q
    |||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  27339604 cgatacaaaaatatatttattgtccataaatatatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatc 27339703  T
Q  98 catcaaattttgagtgatactacaaca 124  Q
    | |||||||| |||| |||||||||||    
T  27339704 cgtcaaatttggagtcatactacaaca 27339730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 6997329 - 6997214
Alignment:
Q  8 aaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattt 107  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||    
T  6997329 aaaaatatatttattgtccataa-tatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaataatattctccatccatcaaattt 6997231  T
Q  108 tgagtgatactacaaca 124  Q
    ||||| |||||| ||||    
T  6997230 tgagtcatactataaca 6997214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 16561250 - 16561131
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| || ||| ||||    
T  16561250 tacaaaaagatatttattgtcaataaatatattttcagcacaaaatatatttgaaacaaatattttatatttttagcaacaatattcttcatccaacaaa 16561151  T
Q  105 ttttgagtgatactacaaca 124  Q
    |||||| | |||| ||||||    
T  16561150 ttttgaatcatacaacaaca 16561131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 6996148 - 6996067
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaa 86  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  6996148 tacaaaaatatatgtattgtccataaatatattttcagcacaaaatatatttgaaacaagtcttttatatttttagcaacaa 6996067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 13785764 - 13785833
Alignment:
Q  43 cacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagt 112  Q
    ||||||||||||||||||||||||||| ||||||| ||| ||||||||||||| ||||||| ||||||||    
T  13785764 cacaaaatatatttgaaacaaatctttcatatttttagcgacaatattctccatccatcaatttttgagt 13785833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 32260817 - 32260748
Alignment:
Q  43 cacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagt 112  Q
    |||||||||||||| |||||| ||||||||||||| ||||||||| |||| || ||||||||||||||||    
T  32260817 cacaaaatatattttaaacaattcttttatatttttagcaacaatcttcttcatccatcaaattttgagt 32260748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 13112047 - 13112099
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttg 57  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| |||||    
T  13112047 tacaaaaatatatttattgtccatgaatatattttcagcataaaatacatttg 13112099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 11693627 - 11693666
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagca 44  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11693627 tacaaaaatatatttattgtccataaatatattttcagca 11693666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 10115555 - 10115509
Alignment:
Q  41 agcacaaaatatatttgaaacaaatcttttatattttcagcaacaat 87  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||    
T  10115555 agcacaaaatatatttgaaacaaatcttttatatttttaacaacaat 10115509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 16855265 - 16855312
Alignment:
Q  46 aaaatatatttgaaacaaatcttttatattttcagcaacaatattctc 93  Q
    ||||||||||||||||||||||||||||||||| ||| |||| |||||    
T  16855265 aaaatatatttgaaacaaatcttttatattttctgcatcaatcttctc 16855312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 32260872 - 32260833
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagca 44  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  32260872 tacaaaaatatatttattgttcataaatatattttcagca 32260833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 11693680 - 11693751
Alignment:
Q  41 agcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagt 112  Q
    ||||| |||||||||| |||||||  ||||||| ||| ||||| ||| |||| || ||||||||||||||||    
T  11693680 agcacgaaatatatttaaaacaaaatttttataattttagcaataatcttcttcatccatcaaattttgagt 11693751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 13785706 - 13785748
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagca 44  Q
    ||||||||||||||||||| | || ||||||||||||||||||    
T  13785706 cgatacaaaaatatatttactatctataaatatattttcagca 13785748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 4e-54; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 35218443 - 35218566
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||    
T  35218443 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatc 35218542  T
Q  102 aaattttgagtgatactacaacaa 125  Q
    ||||||||||| ||||||||||||    
T  35218543 aaattttgagtcatactacaacaa 35218566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 42923975 - 42924094
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  42923975 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaa 42924074  T
Q  105 ttttgagtgatactacaaca 124  Q
    |||||||| |||||||||||    
T  42924075 ttttgagtcatactacaaca 42924094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 35216062 - 35216184
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||    
T  35216062 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatc 35216161  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||||| |||||||||||    
T  35216162 aaattttgagtcatactacaaca 35216184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 42452571 - 42452447
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||    
T  42452571 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatc 42452472  T
Q  102 aaattttgagtgatactacaacaat 126  Q
    ||||||| ||| |||||||||||||    
T  42452471 aaattttaagtcatactacaacaat 42452447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 23452707 - 23452829
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  23452707 cgatacaaaaatatatttattgtccataaatttattttcagcataaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 23452806  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||||| |||||||||||    
T  23452807 aaattttgagtcatactacaaca 23452829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 27583791 - 27583907
Alignment:
Q  8 aaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattt 107  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||| ||    
T  27583791 aaaaatatatttattgttcataaatatatcttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaaatt 27583890  T
Q  108 tgagtgatactacaaca 124  Q
    ||||| |||||||||||    
T  27583891 tgagtcatactacaaca 27583907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 28568628 - 28568738
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||| |||||||||||||| || | |||    
T  28568628 cgatacaaaaatatatttattgtccataaatatattttcaaaacaaaatatatttgaaacaaatcttttatagttttagcaacaatattcttcatctatc 28568727  T
Q  102 aaattttgagt 112  Q
    |||||||||||    
T  28568728 aaattttgagt 28568738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 27136378 - 27136507
Alignment:
Q  5 tacaaaaatatatttattgtccataaatat--------attttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaa 96  Q
    |||||||||||||||||| |||||||||||        ||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||| ||     
T  27136378 tacaaaaatatatttattttccataaatatatttatatattttcaacacaaaatatatttgaaacaaatcttttatatttttagcaccaatattcttcat 27136477  T
Q  97 ccatcaaattttgagtgatactacaacaat 126  Q
    |||||||||||||||| |||||||||||||    
T  27136478 ccatcaaattttgagtcatactacaacaat 27136507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 29 - 117
Target Start/End: Original strand, 34575608 - 34575696
Alignment:
Q  29 aaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatac 117  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||| || |||||||||||||||| ||||    
T  34575608 aaatatattttcagcacaaaatatatttagaacaaatcttttatatttttagcaacaatattcttcatccatcaaattttgagtcatac 34575696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 49 - 112
Target Start/End: Complemental strand, 28568411 - 28568348
Alignment:
Q  49 atatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagt 112  Q
    ||||||||||||||||||||||||||||| | |||||||||||| || ||||||||||||||||    
T  28568411 atatatttgaaacaaatcttttatatttttaacaacaatattcttcatccatcaaattttgagt 28568348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 41303549 - 41303621
Alignment:
Q  41 agcacaaaatatatttgaaacaaatcttttata-ttttcagcaacaatattctccaaccatcaaattttgagt 112  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||| |||| || |||||||||| |||||    
T  41303549 agcacaaaatatatttgaaacaaatcttttatattttttagcaacaatcttcttcatccatcaaattctgagt 41303621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 15693655 - 15693589
Alignment:
Q  41 agcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaatttt 108  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||| | || ||||||||||||    
T  15693655 agcacaaaatatatttgaaacaaatc-tttatatttttagcaacaatattattcatccatcaaatttt 15693589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 15693708 - 15693669
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagca 44  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  15693708 tacaaaaatatatttattgcccataaatatattttcagca 15693669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 39287010 - 39286971
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagca 44  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  39287010 tacaaaaatatatttattgtccataaatatattttaagca 39286971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 39286952 - 39286911
Alignment:
Q  46 aaaatatatttgaaacaaatcttttatattttcagcaacaat 87  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  39286952 aaaatatatttgaaacaaatcatttatatttttagcaacaat 39286911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 7502633 - 7502582
Alignment:
Q  60 acaaatcttttatattttcagcaacaatattctccaaccatcaaattttgag 111  Q
    |||||||||||||| ||| ||||||||| |||| || |||||||||||||||    
T  7502633 acaaatcttttatactttgagcaacaatcttcttcatccatcaaattttgag 7502582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 7502677 - 7502638
Alignment:
Q  4 atacaaaaatatatttattgtccataaatatattttcagc 43  Q
    |||||||||||| |||||||| ||||||||||||||||||    
T  7502677 atacaaaaatatttttattgttcataaatatattttcagc 7502638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 2e-53; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 5275806 - 5275928
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||    
T  5275806 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaataaatcttttatatttttagcaacaatattctccatccatc 5275905  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||||| |||||||||||    
T  5275906 aaattttgagtcatactacaaca 5275928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 2 - 127
Target Start/End: Original strand, 30035074 - 30035199
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  30035074 cgatacaaaaatatatttattgtctataaatatatttttagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 30035173  T
Q  102 aaattttgagtgatactacaacaatt 127  Q
    ||||||||||| ||||||||||||||    
T  30035174 aaattttgagtcatactacaacaatt 30035199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 2629357 - 2629479
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |  |||||    
T  2629357 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccatc 2629456  T
Q  102 aaattttgagtgatactacaaca 124  Q
    ||||||||||| |||||||||||    
T  2629457 aaattttgagtcatactacaaca 2629479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 12195982 - 12196104
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  12195982 cgatacaaaaatatatttattgtccataaatatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 12196081  T
Q  102 aaattttgagtgatactacaaca 124  Q
    || |||||||| |||||||||||    
T  12196082 aatttttgagtcatactacaaca 12196104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 30967043 - 30966923
Alignment:
Q  4 atacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaa 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||    
T  30967043 atacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaataaatcttttatatttttagcaacaatattctccatccatcaa 30966944  T
Q  104 attttgagtgatactacaaca 124  Q
    |||| |||| |||||||||||    
T  30966943 atttggagtcatactacaaca 30966923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 2 - 125
Target Start/End: Complemental strand, 18317873 - 18317750
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |  || ||    
T  18317873 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccttc 18317774  T
Q  102 aaattttgagtgatactacaacaa 125  Q
    ||||||||||| ||||||||||||    
T  18317773 aaattttgagtcatactacaacaa 18317750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 19705043 - 19705166
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |  |||||    
T  19705043 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatctttgaaacaaatcttttatatttttagcaacaatattcttcttccatc 19705142  T
Q  102 aaattttgagtgatactacaacaa 125  Q
    ||||||||||| ||||||||||||    
T  19705143 aaattttgagtcatactacaacaa 19705166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 26933036 - 26933159
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  26933036 cgatacaaaaatatatttattgtccataataatattttcagcacaatatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatc 26933135  T
Q  102 aaattttgagtgatactacaacaa 125  Q
    || |||||||| ||||||||||||    
T  26933136 aatttttgagtcatactacaacaa 26933159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 22858417 - 22858536
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |  ||||||||||| || ||||||||    
T  22858417 tacaaaaatatatttattgtccataaatatattttcagcacaaagtatatttaaaacaaatcttttatatttttattaacaatattcttcatccatcaaa 22858516  T
Q  105 ttttgagtgatactacaaca 124  Q
    |||||||| |||||||||||    
T  22858517 ttttgagtcatactacaaca 22858536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 26 - 122
Target Start/End: Complemental strand, 20526644 - 20526548
Alignment:
Q  26 cataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaa 122  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||| |||||||||    
T  20526644 cataaatatattttcagcataaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcacccatcaaattttgagtcatactacaa 20526548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 17852385 - 17852265
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagca--acaatattctccaaccatca 102  Q
    |||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||| ||||  |||||||||||| | |||||    
T  17852385 tacaaaaatatatttattgtccataaatatattttcagcataaa--atatttgaaacaaatcttttatatttttagcaacacaatattctcc-atcatca 17852289  T
Q  103 aattttgagtgatactacaacaat 126  Q
    |||||||||| ||| | |||||||    
T  17852288 aattttgagtcatatttcaacaat 17852265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 17011895 - 17011781
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    ||||||||||||||||||||||||||||||||||||  ||||||  |||||| ||||||| |||||||||||| ||||| |||||||| || ||||||||    
T  17011895 tacaaaaatatatttattgtccataaatatattttctacacaaa--atatttaaaacaaa-cttttatatttttagcaataatattcttcatccatcaaa 17011799  T
Q  105 ttttgagtgatactacaa 122  Q
    |||| ||| |||||||||    
T  17011798 ttttaagtcatactacaa 17011781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 102
Target Start/End: Complemental strand, 30445304 - 30445243
Alignment:
Q  41 agcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatca 102  Q
    ||||||||||||||||||||||||| ||||||||||  |||||||||||||| || ||||||    
T  30445304 agcacaaaatatatttgaaacaaatattttatatttctagcaacaatattcttcatccatca 30445243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 41 - 112
Target Start/End: Complemental strand, 30443097 - 30443024
Alignment:
Q  41 agcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc--aaattttgagt 112  Q
    |||| |||||||||||||||||||||| ||||||||| | |||||||||||| || |||||  |||||||||||    
T  30443097 agcaaaaaatatatttgaaacaaatctcttatatttttaacaacaatattcttcatccatcataaattttgagt 30443024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 30445357 - 30445318
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagca 44  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  30445357 tacaaaaatatatttattgttcataaatatattttcagca 30445318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 9 - 123
Target Start/End: Original strand, 2070 - 2184
Alignment:
Q  9 aaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaatttt 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  2070 aaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaatttt 2169  T
Q  109 gagtgatactacaac 123  Q
    |||| ||||||||||    
T  2170 gagtcatactacaac 2184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 101; Significance: 6e-50; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 11942 - 12062
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||    
T  11942 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaattttttatatttttagcaacaatattctccatccatcaaa 12041  T
Q  105 ttttgagtgatactacaacaa 125  Q
    |||||| | ||||||||||||    
T  12042 ttttgaatcatactacaacaa 12062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 2 - 125
Target Start/End: Complemental strand, 1857 - 1734
Alignment:
Q  2 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatc 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |  || ||    
T  1857 cgatacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattcttcttccttc 1758  T
Q  102 aaattttgagtgatactacaacaa 125  Q
    ||||||||||| ||||||||||||    
T  1757 aaattttgagtcatactacaacaa 1734  T

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Target: scaffold0005 (Bit Score: 100; Significance: 2e-49; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 51828 - 51709
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||    
T  51828 tacaaaaatatatttattgtccataaatatattttcaccacaaaatatatttgaaacaaatcttttatatttttagcaacattattctccatccatcaaa 51729  T
Q  105 ttttgagtgatactacaaca 124  Q
    |||||||| |||||||||||    
T  51728 ttttgagtcatactacaaca 51709  T

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Target: scaffold0005; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 50230 - 50159
Alignment:
Q  53 atttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 124  Q
    ||||||||||||||||||||||||| ||||||| |||||| || |||||||||||||||| |||||||||||    
T  50230 atttgaaacaaatcttttatatttttagcaacattattcttcatccatcaaattttgagtcatactacaaca 50159  T

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Target: scaffold0005; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 170115 - 170076
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagca 44  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  170115 tacaaaaatatatttgttgtccatgaatatattttcagca 170076  T

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Target: scaffold0133 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 4665 - 4546
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||| || ||||||||    
T  4665 tacaaaaatatatatattgtccataaatatattttcagcacgaaatatattcgaaacaaatcttttatatttttagcaacaatattcttcatccatcaaa 4566  T
Q  105 ttttgagtgatactacaaca 124  Q
    |||||||| ||||| |||||    
T  4565 ttttgagttatactgcaaca 4546  T

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Target: scaffold0031 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 79002 - 78883
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaa 104  Q
    |||||||||||||||||| |||||||||||||||| |||| ||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||    
T  79002 tacaaaaatatatttattatccataaatatatttttagcagaaaatatatttgagacaaatcttttatatttttagcaacaatattctccatccatcaaa 78903  T
Q  105 ttttgagtgatactacaaca 124  Q
    |||| ||| |||||||||||    
T  78902 ttttaagtcatactacaaca 78883  T

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Target: scaffold1674 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 1 - 95
Alignment:
Q  30 aatatattttcagcacaaaatatatttgaaacaaatcttttatattttcagcaacaatattctccaaccatcaaattttgagtgatactacaaca 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||    
T  1 aatatattttcagcacaaaatatatttgaaacaaatcttttatatttttagcaacaatattctccatccatcaaattttgagtcatactacaaca 95  T

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Target: scaffold0533 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 2232 - 2273
Alignment:
Q  46 aaaatatatttgaaacaaatcttttatattttcagcaacaat 87  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  2232 aaaatatatttgaaacaaatcttttatattttctgcaacaat 2273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 57869 - 57905
Alignment:
Q  5 tacaaaaatatatttattgtccataaatatattttca 41  Q
    |||||||||||||||||||| |||| |||||||||||    
T  57869 tacaaaaatatatttattgttcatacatatattttca 57905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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