View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0707_2D_low_17 (Length: 442)

Name: NF0707_2D_low_17
Description: NF0707_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0707_2D_low_17
NF0707_2D_low_17
[»] chr7 (40 HSPs)
chr7 (235-425)||(11897711-11897901)
chr7 (72-231)||(28112862-28113021)
chr7 (72-231)||(36392204-36392364)
chr7 (72-236)||(15309810-15309974)
chr7 (71-203)||(33603308-33603440)
chr7 (79-231)||(34142500-34142652)
chr7 (71-231)||(45361703-45361863)
chr7 (72-211)||(45257865-45258004)
chr7 (72-231)||(48194466-48194625)
chr7 (79-231)||(40590391-40590543)
chr7 (71-219)||(28977649-28977797)
chr7 (72-231)||(10524166-10524324)
chr7 (72-231)||(46596965-46597122)
chr7 (72-211)||(20566168-20566307)
chr7 (84-212)||(15070453-15070581)
chr7 (76-231)||(41623723-41623868)
chr7 (72-231)||(17840725-17840883)
chr7 (72-231)||(46860590-46860739)
chr7 (109-211)||(34139600-34139702)
chr7 (74-212)||(42503915-42504053)
chr7 (144-231)||(10225750-10225837)
chr7 (97-211)||(9365778-9365892)
chr7 (74-212)||(22292573-22292711)
chr7 (74-234)||(4231093-4231253)
chr7 (84-210)||(20876415-20876541)
chr7 (82-212)||(43349738-43349868)
chr7 (101-211)||(17184933-17185043)
chr7 (72-141)||(21185794-21185863)
chr7 (72-141)||(48272290-48272359)
chr7 (73-141)||(42684043-42684111)
chr7 (72-230)||(48314753-48314901)
chr7 (1-47)||(10225627-10225673)
chr7 (74-237)||(1640961-1641112)
chr7 (2-47)||(41623644-41623689)
chr7 (2-47)||(42683968-42684013)
chr7 (71-131)||(10225698-10225758)
chr7 (100-233)||(42736731-42736864)
chr7 (2-51)||(21185885-21185934)
chr7 (191-230)||(48272380-48272419)
chr7 (177-231)||(42684137-42684191)
[»] chr4 (40 HSPs)
chr4 (2-231)||(33383884-33384113)
chr4 (72-231)||(51426616-51426777)
chr4 (2-231)||(955871-956099)
chr4 (71-231)||(1044380-1044538)
chr4 (71-231)||(9491118-9491278)
chr4 (71-231)||(56140524-56140684)
chr4 (72-231)||(44558728-44558887)
chr4 (76-231)||(37868107-37868262)
chr4 (72-231)||(39590402-39590561)
chr4 (72-231)||(49572736-49572894)
chr4 (72-234)||(4783722-4783881)
chr4 (72-231)||(6280937-6281096)
chr4 (72-211)||(21015838-21015977)
chr4 (72-231)||(34528244-34528403)
chr4 (72-231)||(34151693-34151853)
chr4 (72-211)||(28083825-28083964)
chr4 (72-194)||(49422206-49422328)
chr4 (72-211)||(40352435-40352574)
chr4 (72-211)||(41793463-41793602)
chr4 (74-233)||(51026132-51026290)
chr4 (72-211)||(55799364-55799503)
chr4 (74-211)||(36774809-36774946)
chr4 (97-233)||(43887577-43887712)
chr4 (97-211)||(6175976-6176090)
chr4 (97-211)||(49096178-49096292)
chr4 (104-236)||(4909896-4910028)
chr4 (177-237)||(21410205-21410265)
chr4 (75-230)||(37959568-37959713)
chr4 (97-211)||(22438379-22438493)
chr4 (114-236)||(47312927-47313049)
chr4 (2-51)||(34151873-34151922)
chr4 (2-47)||(44558918-44558963)
chr4 (2-51)||(51426797-51426846)
chr4 (74-145)||(9718977-9719048)
chr4 (182-233)||(21171257-21171307)
chr4 (2-44)||(9491029-9491071)
chr4 (185-233)||(24076809-24076857)
chr4 (16-47)||(49572674-49572705)
chr4 (74-198)||(2774736-2774861)
chr4 (105-233)||(8866830-8866958)
[»] chr5 (34 HSPs)
chr5 (71-231)||(25499721-25499881)
chr5 (2-231)||(34682336-34682564)
chr5 (72-231)||(541006-541162)
chr5 (72-212)||(5894-6034)
chr5 (71-231)||(41798898-41799059)
chr5 (71-202)||(35926466-35926597)
chr5 (72-229)||(41201809-41201966)
chr5 (72-231)||(8574801-8574959)
chr5 (72-231)||(11348336-11348494)
chr5 (72-211)||(19035337-19035476)
chr5 (97-211)||(27660039-27660153)
chr5 (72-212)||(11028839-11028979)
chr5 (72-212)||(38855546-38855686)
chr5 (75-211)||(8539381-8539516)
chr5 (117-231)||(30887256-30887371)
chr5 (74-233)||(36348708-36348866)
chr5 (74-211)||(7483857-7483994)
chr5 (2-230)||(18309823-18310040)
chr5 (103-229)||(1398685-1398811)
chr5 (74-211)||(1696461-1696598)
chr5 (74-211)||(41088233-41088370)
chr5 (72-211)||(30710995-30711133)
chr5 (69-212)||(6791814-6791963)
chr5 (74-209)||(1973095-1973230)
chr5 (72-229)||(3602994-3603140)
chr5 (74-236)||(23190679-23190841)
chr5 (74-143)||(20199996-20200065)
chr5 (2-47)||(25499641-25499686)
chr5 (74-136)||(40937159-40937221)
chr5 (176-233)||(7401807-7401864)
chr5 (177-231)||(35566967-35567021)
chr5 (185-231)||(31239720-31239766)
chr5 (177-207)||(40937253-40937283)
chr5 (11-44)||(1398913-1398946)
[»] chr3 (55 HSPs)
chr3 (72-231)||(55267495-55267654)
chr3 (72-234)||(34645638-34645798)
chr3 (71-231)||(43478662-43478823)
chr3 (72-231)||(2267136-2267294)
chr3 (68-231)||(13894306-13894469)
chr3 (72-231)||(34691705-34691864)
chr3 (72-214)||(55205364-55205506)
chr3 (71-231)||(45098884-45099044)
chr3 (72-212)||(50998489-50998629)
chr3 (77-231)||(16484294-16484449)
chr3 (72-231)||(24700801-24700960)
chr3 (68-229)||(51693960-51694121)
chr3 (71-212)||(52567857-52567998)
chr3 (72-231)||(44490425-44490584)
chr3 (76-219)||(49217182-49217325)
chr3 (73-231)||(41805510-41805668)
chr3 (72-219)||(43571518-43571667)
chr3 (72-231)||(4002794-4002951)
chr3 (72-212)||(36136433-36136572)
chr3 (2-218)||(44223114-44223329)
chr3 (72-211)||(2645555-2645694)
chr3 (84-231)||(19440336-19440483)
chr3 (77-236)||(20374296-20374445)
chr3 (97-211)||(2950465-2950579)
chr3 (97-211)||(46406451-46406565)
chr3 (74-233)||(42321806-42321964)
chr3 (97-211)||(49138713-49138827)
chr3 (74-212)||(51017020-51017158)
chr3 (74-233)||(50457574-50457735)
chr3 (91-211)||(54391882-54392002)
chr3 (74-236)||(18441959-18442121)
chr3 (74-236)||(19487033-19487195)
chr3 (97-211)||(34051173-34051287)
chr3 (74-211)||(44929199-44929336)
chr3 (72-167)||(3493728-3493823)
chr3 (72-167)||(3497422-3497517)
chr3 (72-230)||(7247705-7247853)
chr3 (76-190)||(49275125-49275239)
chr3 (72-136)||(2430112-2430176)
chr3 (74-205)||(27096093-27096224)
chr3 (72-230)||(46345017-46345165)
chr3 (160-230)||(2432866-2432936)
chr3 (74-211)||(11377345-11377482)
chr3 (72-230)||(41579568-41579717)
chr3 (74-141)||(34470483-34470550)
chr3 (2-44)||(43478574-43478616)
chr3 (2-47)||(43571447-43571492)
chr3 (2-47)||(49217357-49217402)
chr3 (185-233)||(30194379-30194426)
chr3 (74-210)||(51011672-51011808)
chr3 (74-135)||(10051779-10051840)
chr3 (2-38)||(2430030-2430066)
chr3 (16-44)||(41805438-41805466)
chr3 (16-44)||(55205554-55205582)
chr3 (16-44)||(55267699-55267727)
[»] chr2 (35 HSPs)
chr2 (72-231)||(43493119-43493278)
chr2 (72-231)||(41497552-41497711)
chr2 (73-231)||(8268585-8268743)
chr2 (72-231)||(35493176-35493335)
chr2 (72-231)||(40675817-40675975)
chr2 (72-231)||(19470037-19470195)
chr2 (72-231)||(23409339-23409495)
chr2 (71-231)||(3943024-3943185)
chr2 (71-231)||(16583427-16583588)
chr2 (71-231)||(34639147-34639307)
chr2 (74-212)||(23719444-23719582)
chr2 (74-212)||(24107116-24107254)
chr2 (71-231)||(29090655-29090816)
chr2 (72-231)||(23786204-23786364)
chr2 (72-212)||(28476902-28477042)
chr2 (72-211)||(3935962-3936101)
chr2 (72-211)||(17426200-17426339)
chr2 (72-211)||(22003236-22003375)
chr2 (74-212)||(5422057-5422195)
chr2 (72-212)||(39798541-39798681)
chr2 (82-211)||(10358896-10359025)
chr2 (97-211)||(43984161-43984275)
chr2 (74-211)||(34520065-34520202)
chr2 (74-233)||(37311041-37311199)
chr2 (77-229)||(14181673-14181815)
chr2 (2-46)||(8268515-8268559)
chr2 (1-44)||(43493025-43493068)
chr2 (2-47)||(19470223-19470268)
chr2 (2-47)||(23409268-23409313)
chr2 (2-47)||(40676007-40676052)
chr2 (2-44)||(35493094-35493136)
chr2 (153-211)||(45435122-45435180)
chr2 (72-141)||(2917842-2917911)
chr2 (74-145)||(17537320-17537391)
chr2 (185-233)||(33405662-33405710)
[»] chr6 (24 HSPs)
chr6 (72-231)||(35019656-35019815)
chr6 (71-231)||(29076157-29076317)
chr6 (71-231)||(29109690-29109850)
chr6 (71-231)||(29111130-29111290)
chr6 (72-231)||(34801583-34801743)
chr6 (71-231)||(29068099-29068259)
chr6 (71-231)||(29083346-29083506)
chr6 (76-231)||(13616320-13616475)
chr6 (2-185)||(32026087-32026270)
chr6 (72-211)||(32691284-32691423)
chr6 (72-230)||(13404467-13404625)
chr6 (75-229)||(14124556-14124710)
chr6 (72-211)||(27641553-27641692)
chr6 (97-211)||(11693887-11694001)
chr6 (127-237)||(17126862-17126973)
chr6 (97-211)||(6206920-6207034)
chr6 (2-47)||(34801777-34801822)
chr6 (74-211)||(12398521-12398658)
chr6 (6-47)||(14124486-14124527)
chr6 (2-47)||(29068027-29068072)
chr6 (2-47)||(29083273-29083318)
chr6 (2-47)||(29109616-29109661)
chr6 (84-215)||(30763412-30763543)
chr6 (16-44)||(35019857-35019885)
[»] chr1 (44 HSPs)
chr1 (72-231)||(49924936-49925095)
chr1 (72-231)||(14172167-14172326)
chr1 (72-231)||(51271425-51271584)
chr1 (77-231)||(44598745-44598899)
chr1 (71-231)||(27485113-27485272)
chr1 (72-231)||(36911530-36911690)
chr1 (74-231)||(49398307-49398463)
chr1 (72-204)||(41803868-41804000)
chr1 (72-231)||(42570201-42570361)
chr1 (71-231)||(44336329-44336489)
chr1 (72-231)||(26633606-26633766)
chr1 (73-219)||(13148889-13149029)
chr1 (71-210)||(29760604-29760743)
chr1 (72-212)||(13633964-13634104)
chr1 (72-231)||(35524818-35524967)
chr1 (108-213)||(29437890-29437995)
chr1 (72-211)||(19161991-19162130)
chr1 (72-211)||(49428996-49429135)
chr1 (72-230)||(6437374-6437532)
chr1 (74-212)||(23344242-23344380)
chr1 (74-212)||(38043549-38043687)
chr1 (74-211)||(39855589-39855727)
chr1 (71-236)||(24362363-24362525)
chr1 (97-212)||(48228170-48228286)
chr1 (77-211)||(33285790-33285924)
chr1 (74-212)||(14440872-14441009)
chr1 (155-233)||(26497804-26497882)
chr1 (72-143)||(18974965-18975036)
chr1 (74-233)||(49260007-49260164)
chr1 (115-233)||(12789787-12789904)
chr1 (72-136)||(46141941-46142005)
chr1 (2-47)||(13974489-13974534)
chr1 (2-47)||(41803797-41803842)
chr1 (87-144)||(13285196-13285253)
chr1 (74-212)||(40531797-40531935)
chr1 (185-234)||(16530628-16530677)
chr1 (185-233)||(39063288-39063336)
chr1 (170-229)||(13287484-13287543)
chr1 (16-51)||(14172349-14172384)
chr1 (16-47)||(46142032-46142063)
chr1 (160-226)||(19260969-19261035)
chr1 (185-229)||(14771204-14771249)
chr1 (2-38)||(18974879-18974915)
chr1 (16-44)||(42570381-42570409)
[»] chr8 (23 HSPs)
chr8 (71-229)||(41276719-41276877)
chr8 (71-231)||(26455509-26455669)
chr8 (72-231)||(22550699-22550858)
chr8 (72-231)||(28168437-28168596)
chr8 (76-231)||(44052064-44052219)
chr8 (2-210)||(41855464-41855672)
chr8 (72-231)||(42605069-42605228)
chr8 (72-210)||(40703995-40704132)
chr8 (72-212)||(41016512-41016652)
chr8 (72-211)||(45066196-45066335)
chr8 (72-211)||(483915-484054)
chr8 (72-211)||(15030983-15031121)
chr8 (74-211)||(26488303-26488440)
chr8 (74-211)||(38032310-38032447)
chr8 (72-141)||(38872776-38872845)
chr8 (71-141)||(18438793-18438864)
chr8 (1-44)||(42604977-42605020)
chr8 (74-146)||(19241142-19241214)
chr8 (74-146)||(19314326-19314398)
chr8 (74-145)||(26488185-26488256)
chr8 (153-211)||(22519478-22519536)
chr8 (97-145)||(31170581-31170629)
chr8 (16-44)||(40703923-40703951)
[»] scaffold0176 (2 HSPs)
scaffold0176 (79-231)||(3425-3577)
scaffold0176 (109-211)||(525-627)
[»] scaffold0199 (1 HSPs)
scaffold0199 (72-231)||(10758-10916)
[»] scaffold0859 (1 HSPs)
scaffold0859 (74-235)||(2004-2165)
[»] scaffold0094 (1 HSPs)
scaffold0094 (72-211)||(39-178)
[»] scaffold0014 (1 HSPs)
scaffold0014 (72-211)||(84679-84818)
[»] scaffold0494 (1 HSPs)
scaffold0494 (72-212)||(5429-5569)
[»] scaffold0258 (1 HSPs)
scaffold0258 (176-233)||(10246-10303)
[»] scaffold0192 (2 HSPs)
scaffold0192 (72-141)||(16561-16630)
scaffold0192 (185-229)||(16483-16527)
[»] scaffold0618 (1 HSPs)
scaffold0618 (160-230)||(3965-4035)
[»] scaffold0025 (1 HSPs)
scaffold0025 (185-233)||(154368-154417)


Alignment Details
Target: chr7 (Bit Score: 155; Significance: 4e-82; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 235 - 425
Target Start/End: Complemental strand, 11897901 - 11897711
Alignment:
Q  235 caaaatggatacacgaaattggtgtagtgccttcttctctccatcaaagaataactacatggaggaaagattgtttggtcgaaaacatcgaagcaaacca 334  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||  |||    
T  11897901 caaaatggatacacgaaattggtgtagtgccttcctctctccatcaaataataactacatggaggaaagatcgtttggtcgaaaacatcgaagcatgcca 11897802  T
Q  335 aaactattttacggctgaagttaaccatattaccaaaaggtcattcgacaaaatctggtgaatatagcgccatgtgtgttagtagattatg 425  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||    
T  11897801 aaactattttacggcagaagttaaccatattaccaaaaggtcattcgacaaaatctggttaacatagcgccatgtgtgttagtaaattatg 11897711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 28113021 - 28112862
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| |||||||||||  |||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||    
T  28113021 accacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttgaaattgctcaaaatcgcacctagga 28112922  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     ||  ||||| |||||||| ||||||||||||||||||||||| || | |||||||||||    
T  28112921 gaataaaaaatgtaacaatagagttttggaaactcctatgtctgttatgttcttataaca 28112862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 36392364 - 36392204
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| |||||||||||  ||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  36392364 accacaaaacaacaatgcaataggattctaaaaacttacttgtttttgtgattgaaattggcttggaatgacttgaaattgctcaaaatcgcacctagga 36392265  T
Q  172 aaaccaaaaa-cgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     | | ||||| ||||||||||||||||||||||||||||||||| || | | |||||||||    
T  36392264 gatcaaaaaatcgtaacaatggagttttggaaactcctatgtctgttatgtacttataaca 36392204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 72 - 236
Target Start/End: Original strand, 15309810 - 15309974
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| ||||||||||   || ||||||||||||| ||||||||||||||||||||||| |||||||||||||  |||||| | ||||||||||    
T  15309810 accacaaaacaacaatgcaataagattaaaaaaacttacttgtttttgtgattgaaattggcttggaatgacttgaaatgactcaaaattgcacctagga 15309909  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataacagatca 236  Q
     ||||||||||  |||||||||||||||||||||||||||||| ||||  | |||||| ||||||    
T  15309910 gaaccaaaaacaaaacaatggagttttggaaactcctatgtctgttctgattttataatagatca 15309974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 71 - 203
Target Start/End: Complemental strand, 33603440 - 33603308
Alignment:
Q  71 aaccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagg 170  Q
    ||||||||||||||||||||||||  ||| ||||| |||||| |||||||||||||||||| |||| ||||||||||||| ||| ||| |||||||||||    
T  33603440 aaccacaaaacagcaatgcaataggattctaaaaatttacttgtttttgtgattgaaattgacttggaatgacttgaaatggctgaaaatcgcacctagg 33603341  T
Q  171 aaaaccaaaaacgtaacaatggagttttggaaa 203  Q
    | ||||||||| |||||||||||||||||||||    
T  33603340 agaaccaaaaaggtaacaatggagttttggaaa 33603308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 79 - 231
Target Start/End: Original strand, 34142500 - 34142652
Alignment:
Q  79 aacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaa 178  Q
    |||| |||||||||||  |||| ||||||||||| ||||||||||||||||||||||| |||| ||| |||||||||||| ||||| | |||| ||  ||    
T  34142500 aacaacaatgcaataggattcagaaaacttacttgtttttgtgattgaaattggcttggaatggctttaaattgctcaaaatcgcagcaaggagaataaa 34142599  T
Q  179 aaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    ||||| |||||||||||||||||||||||||||||| || |||||||||||||    
T  34142600 aaacgcaacaatggagttttggaaactcctatgtctgttatattcttataaca 34142652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 71 - 231
Target Start/End: Complemental strand, 45361863 - 45361703
Alignment:
Q  71 aaccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagg 170  Q
    |||| ||||||| |||||||||||| || ||||||||||||| ||||| ||||||||||||| ||  |||| |||||||| ||||||| |||||||| ||    
T  45361863 aaccgcaaaacaacaatgcaatagaattaaaaaaacttacttgtttttatgattgaaattggtttagaatggcttgaaatagctcaaaatcgcaccttgg 45361764  T
Q  171 aaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    | | | ||||| |||||||||||||||||||||||||||||||| |||| |||||||||||    
T  45361763 agatcaaaaaatgtaacaatggagttttggaaactcctatgtctgttctgttcttataaca 45361703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 72 - 211
Target Start/End: Original strand, 45257865 - 45258004
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || |||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||| ||||  |||||| |||||||| |||    
T  45257865 accacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttgaaatgacttcaaatgactcaaaatcgcaccttgga 45257964  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatg 211  Q
     || |||||||| ||||||| |||||||||||||||||||    
T  45257965 taatcaaaaacgcaacaatgaagttttggaaactcctatg 45258004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 72 - 231
Target Start/End: Original strand, 48194466 - 48194625
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| |||||||||||  |||| ||||||||||| ||||||||||||||||| ||||| |||  ||| |||||||||||| ||||| | ||||    
T  48194466 accacaaaacaacaatgcaataggattcagaaaacttacttgtttttgtgattgaaattcgcttggaatagcttcaaattgctcaaaatcgcagcaagga 48194565  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    ||| |||||||| |||||| ||||||||||||||||||||||| || | |||||||||||    
T  48194566 aaatcaaaaacgcaacaatagagttttggaaactcctatgtctgttatgttcttataaca 48194625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 79 - 231
Target Start/End: Original strand, 40590391 - 40590543
Alignment:
Q  79 aacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaa 178  Q
    |||| |||||||||||  || ||||||||||||| |||||| |||||||||||||||| |||| |||||||| ||||||| |||||||| ||| | | ||    
T  40590391 aacaacaatgcaataggattaaaaaaacttacttgtttttgcgattgaaattggcttggaatggcttgaaatagctcaaaatcgcaccttggagatcaaa 40590490  T
Q  179 aaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    ||||||| ||||||| |||||||||||||||||||| |||| |||||||||||    
T  40590491 aaacgtagcaatggaattttggaaactcctatgtctgttctgttcttataaca 40590543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 71 - 219
Target Start/End: Complemental strand, 28977797 - 28977649
Alignment:
Q  71 aaccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagg 170  Q
    |||||||||||| |||||||||||  || ||||||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||||| |||||||| |     
T  28977797 aaccacaaaacaacaatgcaataggattaaaaaaacttacttgtttatgtgattgaaattggattggaatgacttgaaatagctcaaaatcgcaccttga 28977698  T
Q  171 aaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattct 219  Q
    | | | |||| ||||||||| ||||||||||||||||||||||| ||||    
T  28977697 agatcaaaaatcgtaacaatagagttttggaaactcctatgtctgttct 28977649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 72 - 231
Target Start/End: Original strand, 10524166 - 10524324
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || |||||||||||  |||||||||||||||| ||||||||||||||||||||||| |||||||| ||||  |||||| |||||||| |||    
T  10524166 accacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatgacttcaaatgactcaaaatcgcaccttgga 10524265  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     ||  ||||||| |||| | ||||||||||||||||||||| | |||| |||||||||||    
T  10524266 taataaaaaacgcaacattagagttttggaaactcctatgt-tgttctgttcttataaca 10524324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 46597122 - 46596965
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| |||||||||||  || |||||||||| || ||||||||||||||||||||||||| || ||| |||||||||||| || |||| ||||    
T  46597122 accacaaaacaacaatgcaataggatt-aaaaaacttagttgtttttgtgattgaaattggcttgaa-tggcttcaaattgctcaaaatctcaccaagga 46597025  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     ||  ||||||| ||||||||||||||||||||| |||||||| |||| |||||||||||    
T  46597024 gaataaaaaacgcaacaatggagttttggaaacttctatgtctgttctgttcttataaca 46596965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 72 - 211
Target Start/End: Original strand, 20566168 - 20566307
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || |||||||||||  |||||||||||||||| ||||||||||| ||||||||||  |||| ||| ||||  |||||| |||||||| | |    
T  20566168 accacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaaatcgcaccttgaa 20566267  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatg 211  Q
    |||  ||||||| |||||||||||||||||||||||||||    
T  20566268 aaattaaaaacgcaacaatggagttttggaaactcctatg 20566307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 84 - 212
Target Start/End: Complemental strand, 15070581 - 15070453
Alignment:
Q  84 caatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacg 183  Q
    |||||||||||  || ||||||||||||| ||||||||||||||||||||||| |||| ||| ||||  |||||| ||||| || ||| |  ||||||||    
T  15070581 caatgcaataggattaaaaaaacttacttgtttttgtgattgaaattggcttgtaatgtcttcaaatgactcaaaatcgcaacttggatactcaaaaacg 15070482  T
Q  184 taacaatggagttttggaaactcctatgt 212  Q
     ||||||||||||||||||||||||||||    
T  15070481 caacaatggagttttggaaactcctatgt 15070453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 76 - 231
Target Start/End: Original strand, 41623723 - 41623868
Alignment:
Q  76 caaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaac 175  Q
    ||||||| |||||||||||  |||||||||||||||| ||||||||||||||||||          ||||||||||||||||| ||||| |||||| | |    
T  41623723 caaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattg----------acttgaaattgctcaaaatcgcatctaggagatc 41623812  T
Q  176 caaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     |||||||| ||||||||||||| ||||||||||||||| |||| | |||||||||    
T  41623813 aaaaaacgtgacaatggagttttcgaaactcctatgtctgttctgtacttataaca 41623868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 72 - 231
Target Start/End: Original strand, 17840725 - 17840883
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| ||  ||||||||||  |||||||||||||||| ||||||||||||||||||| ||| |||||||| ||||  |  ||| |||||||| |||    
T  17840725 accacaaagcaagaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggattggaatgacttcaaatgacctaaaatcgcaccttgga 17840824  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     || |||||||| ||||||| ||||||||| ||||||||| || |||| |||||||||||    
T  17840825 taatcaaaaacgcaacaatgaagttttggagactcctatg-ctgttctgttcttataaca 17840883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 46860739 - 46860590
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| |||||||||||  |||||||||||||||| |||||||||||||||||||          |||  ||||| | ||| ||||||||||||    
T  46860739 accacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattgg----------cttagaattgttaaaaatcgcacctagga 46860650  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     | | |||| || |||||||||||||||||||||||||||||| |||| |||||||||||    
T  46860649 gatcaaaaaccgcaacaatggagttttggaaactcctatgtctgttctgttcttataaca 46860590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 34139600 - 34139702
Alignment:
Q  109 acttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagttttggaaactcct 208  Q
    |||| ||||||||||||||||||||||| |||||||| ||||  |||||| |||||||| ||| ||  ||||||| ||||||||||||||||||||||||    
T  34139600 acttgtttttgtgattgaaattggcttggaatgacttcaaatgactcaaaatcgcaccttggataataaaaaacgcaacaatggagttttggaaactcct 34139699  T
Q  209 atg 211  Q
    |||    
T  34139700 atg 34139702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 74 - 212
Target Start/End: Complemental strand, 42504053 - 42503915
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    |||||| || |||||||||||  || ||||||||||||| |||||||||||||||||| |||  |||| ||| ||||  |||||| ||||| || ||| |    
T  42504053 cacaaagcaacaatgcaataggattaaaaaaacttacttgtttttgtgattgaaattgacttctaatgtcttcaaatgactcaaaatcgcaacttggata 42503954  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatgt 212  Q
      |||||||| ||||||||||||||||||||||||||||    
T  42503953 ctcaaaaacgcaacaatggagttttggaaactcctatgt 42503915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 144 - 231
Target Start/End: Original strand, 10225750 - 10225837
Alignment:
Q  144 ttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    ||||||||||||||| | |||||||||| || |||||||| ||||||||||||||||||||||||||||   ||||||||||||||||    
T  10225750 ttgaaattgctcaaaattgcacctaggagaatcaaaaacgcaacaatggagttttggaaactcctatgttggttctattcttataaca 10225837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 97 - 211
Target Start/End: Complemental strand, 9365892 - 9365778
Alignment:
Q  97 ttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagtt 196  Q
    |||||||||||||||| ||||||||||| ||||||||||  |||| ||| ||||  |||||| ||||||||   ||||  ||||||| ||||||||||||    
T  9365892 ttcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaaatcgcaccttcaaaaattaaaaacgcaacaatggagtt 9365793  T
Q  197 ttggaaactcctatg 211  Q
    |||||||||||||||    
T  9365792 ttggaaactcctatg 9365778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 74 - 212
Target Start/End: Original strand, 22292573 - 22292711
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||| ||||| |||||||  ||||||||||||||||  ||||||| |||||||||||||| |||| |||    ||  | ||||||||||||| | ||    
T  22292573 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatggaa 22292672  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatgt 212  Q
     | ||||||||||||||||| ||||||||||||||||||    
T  22292673 gcaaaaaacgtaacaatggatttttggaaactcctatgt 22292711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 74 - 234
Target Start/End: Original strand, 4231093 - 4231253
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    |||||||||||||||||||||  |   || |||||||||  ||||||| |||||||||||||| ||||||||    ||| | ||| ||||||||| |||     
T  4231093 cacaaaacagcaatgcaataggatgataacaacttacttgattttgtgcttgaaattggcttggaatgacttatgcttggtgaaaatcgcacctaagaat 4231192  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataacagat 234  Q
     ||||||||| || |||| | ||||||||| |||||||||| |||| ||||||||||||||    
T  4231193 tccaaaaacgcaataatgaaattttggaaattcctatgtctgttctgttcttataacagat 4231253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 84 - 210
Target Start/End: Complemental strand, 20876541 - 20876415
Alignment:
Q  84 caatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacg 183  Q
    |||||||||||  ||||||||||||||||  ||||||| ||| |||||||||| |||| |||    ||  | ||||||||||||| | || | |||||||    
T  20876541 caatgcaataggattcaaaaaacttacttgattttgtgcttggaattggcttggaatggcttatgctttgtgaaattcgcacctatggaagcaaaaaacg 20876442  T
Q  184 taacaatggagttttggaaactcctat 210  Q
    |||||||||||||||||||||||||||    
T  20876441 taacaatggagttttggaaactcctat 20876415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 82 - 212
Target Start/End: Complemental strand, 43349868 - 43349738
Alignment:
Q  82 agcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaa 181  Q
    ||||| |||||||  ||||||||||||||||  ||||||| |||||||||||||  |||| |||    ||  | ||||||||||||| | || | |||||    
T  43349868 agcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttcgaatggcttatggtttgtgaaattcgcacctatggaaccaaaaaa 43349769  T
Q  182 cgtaacaatggagttttggaaactcctatgt 212  Q
    |||||||||||||||||||||||||||||||    
T  43349768 cgtaacaatggagttttggaaactcctatgt 43349738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 101 - 211
Target Start/End: Original strand, 17184933 - 17185043
Alignment:
Q  101 aaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagttttgg 200  Q
    ||||||||| ||  |||||||||||||||||||||| |||| |||  | ||  | ||||||||||||| | || | ||||| ||||||||||||||||||    
T  17184933 aaaaacttaattgattttgtgattgaaattggcttggaatggcttatagtttgtgaaattcgcacctatggaagcaaaaaatgtaacaatggagttttgg 17185032  T
Q  201 aaactcctatg 211  Q
    |||||||||||    
T  17185033 aaactcctatg 17185043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 72 - 141
Target Start/End: Complemental strand, 21185863 - 21185794
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatg 141  Q
    ||||||||| | |||||||||||  ||||||||||||| || ||||||||||||||||||||||||||||    
T  21185863 accacaaaataacaatgcaataggattcaaaaaacttatttgtttttgtgattgaaattggcttgaaatg 21185794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 72 - 141
Target Start/End: Original strand, 48272290 - 48272359
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatg 141  Q
    ||||||||||| ||||| |||||  |||||||||||||||| ||||||||||||||||||||||| ||||    
T  48272290 accacaaaacaacaatgtaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatg 48272359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 73 - 141
Target Start/End: Original strand, 42684043 - 42684111
Alignment:
Q  73 ccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatg 141  Q
    |||||||||| |||||||||||  || ||||||||||||||||||||||||||||||||| ||| ||||    
T  42684043 ccacaaaacaacaatgcaataggattaaaaaaacttacttatttttgtgattgaaattggtttggaatg 42684111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 72 - 230
Target Start/End: Complemental strand, 48314901 - 48314753
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||| ||||| ||||          ||  ||| ||||||||| ||    
T  48314901 accacaaaacaacaatgcaatatgattcaaaaaacttacttgtttttgtgattgaaatttgcttggaatg----------gcagaaaatcgcacctaaga 48314812  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataac 230  Q
     ||  |||| || ||||||||| |||||||||||||||||||| || | ||||||||||    
T  48314811 gaatgaaaaccgcaacaatggaattttggaaactcctatgtctgttatgttcttataac 48314753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10225627 - 10225673
Alignment:
Q  1 ttatcctaacatattataaaatcaataaaacctatataatcgaaatt 47  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
T  10225627 ttatcctaacatatcataaaatcaataaaacctatataatcgaaatt 10225673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 237
Target Start/End: Complemental strand, 1641112 - 1640961
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||| | ||||||||||   ||||||| ||||||||  |||||||||||||||||||||| ||||          ||| ||| ||||||||| |||     
T  1641112 cacaaaaaaccaatgcaatatgattcaaaacacttacttgattttgtgattgaaattggcttggaatg----------gctgaaaatcgcacctaagaat 1641023  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataacagatcaa 237  Q
     ||||||||| ||||||||||||||||||||| ||| |||  | || |||||||||||||||||    
T  1641022 tccaaaaacgcaacaatggagttttggaaacttctaagtc--tgctgttcttataacagatcaa 1640961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 41623644 - 41623689
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatataatcgaaatt 47  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  41623644 tatcctaacatatcataaaatcaataaaacctatataatcgaaatt 41623689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 42683968 - 42684013
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatataatcgaaatt 47  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||    
T  42683968 tatcctaacatatcataaaatcaataaaacctatataatcaaaatt 42684013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 131
Target Start/End: Original strand, 10225698 - 10225758
Alignment:
Q  71 aaccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattg 131  Q
    |||||||||||| |||| || |||  || ||||||||||||||||||||||||||||||||    
T  10225698 aaccacaaaacaacaattcagtaggattaaaaaaacttacttatttttgtgattgaaattg 10225758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 233
Target Start/End: Original strand, 42736731 - 42736864
Alignment:
Q  100 aaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaa-acgtaacaatggagtttt 198  Q
    |||||||||||||  ||||||| |||||||||||||| |||| ||     ||||| |||  |||||||  |||| | |||| ||||||||||||||||||    
T  42736731 aaaaaacttacttgattttgtgcttgaaattggcttggaatggctgatgtttgctgaaaaacgcacctgagaaatcaaaaaaacgtaacaatggagtttt 42736830  T
Q  199 ggaaactcctatgtctattctattcttataacaga 233  Q
    ||||||||| ||| || |||| ||| |||||||||    
T  42736831 ggaaactccgatg-ctgttctgttcatataacaga 42736864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 21185934 - 21185885
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatataatcgaaattcaac 51  Q
    ||||||||||||| |||||||||||||||  ||||||||||||||| |||    
T  21185934 tatcctaacatatcataaaatcaataaaatttatataatcgaaatttaac 21185885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 230
Target Start/End: Original strand, 48272380 - 48272419
Alignment:
Q  191 ggagttttggaaactcctatgtctattctattcttataac 230  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  48272380 ggagttttggaaactactatgtctattctgttcttataac 48272419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 42684137 - 42684191
Alignment:
Q  177 aaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    |||| || |||||||||||||||||||||| ||||||| || | |||||||||||    
T  42684137 aaaaccgcaacaatggagttttggaaactcatatgtctgttatgttcttataaca 42684191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 118; Significance: 5e-60; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 2 - 231
Target Start/End: Complemental strand, 33384113 - 33383884
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatataatcgaaattcaacnnnnnnnnnnnnnnnntttaaccacaaaacagcaatgcaatagagttcaa 101  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||                ||  ||||||||||| ||||||||||   |||||    
T  33384113 tatcctaacatatcataaaatcaataaaacctatataatcgaaatttaacaaaaaaaaacaaacaattcgaccacaaaacaacaatgcaataagattcaa 33384014  T
Q  102 aaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagttttgga 201  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| | | |||||| ||||||||||||||||||    
T  33384013 aaaacttacttgtttttgtgattgaaattggcttggaatgacttgaaattgctcaaaatcgcacctaggagatcaaaaaacataacaatggagttttgga 33383914  T
Q  202 aactcctatgtctattctattcttataaca 231  Q
    |||||||||||||||||| |||||||||||    
T  33383913 aactcctatgtctattctcttcttataaca 33383884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 51426777 - 51426616
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||    
T  51426777 accacaaaacagcaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatgacttcaaattgctcaaaatcgcacctagga 51426678  T
Q  172 aa--accaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    ||  |  ||||||||||||||||||||||||||||||| |||||| |||| | |||||||||    
T  51426677 aaataaaaaaaacgtaacaatggagttttggaaactccaatgtctgttctgtacttataaca 51426616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 2 - 231
Target Start/End: Complemental strand, 956099 - 955871
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatataatcgaaattcaacnnnnnnnnnnnnnnnntttaaccacaaaacagcaatgcaatagagttcaa 101  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||                ||  ||||||||||| |||||||||||  |||||    
T  956099 tatcctaacatatcataaaatcaataaaacctatataatcgaaatttaacaacaaatatcaaacaattcgaccacaaaacaacaatgcaataggattcaa 956000  T
Q  102 aaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagttttgga 201  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||| | | ||||||||||||||| | |||| ||    
T  955999 aaaacttacttatttttgtgattgaaattggcttggaatggcttgaaattgctcaaaatcgcacctaggagatcaaaaaacgtaacaatgaatttttaga 955900  T
Q  202 aactcctatgtctattctattcttataaca 231  Q
    |||||| |||||| |||| |||||||||||    
T  955899 aactcc-atgtctgttctgttcttataaca 955871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 71 - 231
Target Start/End: Original strand, 1044380 - 1044538
Alignment:
Q  71 aaccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagg 170  Q
    |||| ||||||| ||||||||||   || |||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||    
T  1044380 aaccgcaaaacaacaatgcaataa--ttaaaaaaacttatttgtttttgtgattgaaattggcttgaaatgacttgaaatagctcaaaatcgcaccttgg 1044477  T
Q  171 aaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    | | | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1044478 agatcaaaaaacgtaacaatggagttttggaaactcctatgtctgttctattcttataaca 1044538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 71 - 231
Target Start/End: Original strand, 9491118 - 9491278
Alignment:
Q  71 aaccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagg 170  Q
    |||| ||||| | |||||||||||  || |||||||||||||||||||||||||||||||| |||| ||||||||||||| ||| ||| |||||||| ||    
T  9491118 aaccgcaaaataacaatgcaataggattaaaaaaacttacttatttttgtgattgaaattgacttggaatgacttgaaatagcttaaaatcgcaccttgg 9491217  T
Q  171 aaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    | | | |||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  9491218 agatcaaaaaacgtaacaatggagttttggaaactcctatgtctgttctgttcttataaca 9491278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 71 - 231
Target Start/End: Original strand, 56140524 - 56140684
Alignment:
Q  71 aaccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagg 170  Q
    |||| ||||||| |||||||||||  || ||||||||||||| ||||||||||||||||||||||| |||| ||||||||  |||||| |||||||| ||    
T  56140524 aaccgcaaaacaacaatgcaataggattaaaaaaacttacttgtttttgtgattgaaattggcttggaatggcttgaaataactcaaaatcgcaccttgg 56140623  T
Q  171 aaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    | | | |||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  56140624 agatcaaaaaacgtaacaatggagttttggaaactcctatgtctgttctgttcttataaca 56140684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 44558887 - 44558728
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||| | |||||||||||  |||||||||||||||| ||||||||||||||||||||||| ||||||||  ||||||| ||| | ||||||||||    
T  44558887 accacaaaataacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatgacttcgaattgctaaaaattgcacctagga 44558788  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     || ||||||||||| ||||||||||||||||||||||||||| |||| | |||||||||    
T  44558787 gaatcaaaaacgtaataatggagttttggaaactcctatgtctgttctgtacttataaca 44558728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 76 - 231
Target Start/End: Original strand, 37868107 - 37868262
Alignment:
Q  76 caaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaac 175  Q
    ||||||| |||||||||||  ||  |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||| |      
T  37868107 caaaacaacaatgcaataggattacaaaaacttacttgtttttgtgattgaaattggcttgaaatgacttgaaatagctcaaaatcgcaccttggagata 37868206  T
Q  176 caaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     ||||| |||||||||||||||||||||||||||| ||| |||| |||||||||||    
T  37868207 aaaaaatgtaacaatggagttttggaaactcctatatctgttctgttcttataaca 37868262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 72 - 231
Target Start/End: Original strand, 39590402 - 39590561
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||| |||| |||| ||| |||||||||||| ||||| | ||||    
T  39590402 accacaaaacaacaatgcaatagggttcagaaaacttacttgtttttgtgattgaaattgacttggaatggcttcaaattgctcaaaatcgcagcaagga 39590501  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     ||  ||||||| |||||| ||||||||||||||||||||||| |||| |||||||||||    
T  39590502 gaataaaaaacgcaacaattgagttttggaaactcctatgtctgttctgttcttataaca 39590561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 72 - 231
Target Start/End: Original strand, 49572736 - 49572894
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||| | ||||||||||   |||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||| | ||||||| ||    
T  49572736 accacaaaataacaatgcaatatgattcaaaaaacttacttgtttttgtgattgaaattggcttggaatgactt-aaattgctcaaaattgcacctaaga 49572834  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     | | ||||||||||||||||||||||||||| |||||||||| |||| | |||||||||    
T  49572835 gatcaaaaaacgtaacaatggagttttggaaattcctatgtctgttctgtacttataaca 49572894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 4783881 - 4783722
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| ||||||||||   |||||||||   |||| ||||||||||||||||| ||||| |||| |||||||||||||||| ||| || |||||    
T  4783881 accacaaaacaacaatgcaataagattcaaaaaa---acttgtttttgtgattgaaattagcttggaatggcttgaaattgctcaaaatcgtacttagga 4783785  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataacagat 234  Q
     |||||||||| ||||||||||||||||||||||||||||| | |||| |||||| |||||||    
T  4783784 caaccaaaaacctaacaatggagttttggaaactcctatgtttgttctgttcttaaaacagat 4783722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 6281096 - 6280937
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| ||||||||||   || ||||||||||||| ||||||||||||||||||| ||| |||||||| |||||| | ||| ||||||| ||||    
T  6281096 accacaaaacaacaatgcaatatgattaaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgtttaaaatcgcaccaagga 6280997  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     ||  ||||||||||||||| |||||||||||||||||| ||| || |||||||||||||    
T  6280996 gaataaaaaacgtaacaatgaagttttggaaactcctatatcttttatattcttataaca 6280937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 72 - 211
Target Start/End: Complemental strand, 21015977 - 21015838
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || |||||||||||  |||||||||||||||| ||||||||||||||||||||||| |||| ||| ||||  |||||| |||||||| |||    
T  21015977 accacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatggcttcaaatgactcaaaatcgcaccttgga 21015878  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatg 211  Q
     || |||||||| |||||||||||||||||||||||||||    
T  21015877 taatcaaaaacgcaacaatggagttttggaaactcctatg 21015838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 34528403 - 34528244
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| |||||||||||  |||| |||||||| || ||||||||||||||||||||||| |||| ||| |||||||||||| ||||| | ||||    
T  34528403 accacaaaacaacaatgcaataggattcagaaaacttatttgtttttgtgattgaaattggcttggaatggcttcaaattgctcaaaatcgcagcaagga 34528304  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     || |||||||  |||||||||||||||||||||||||||||  || | |||||||||||    
T  34528303 taatcaaaaacacaacaatggagttttggaaactcctatgtccgttatgttcttataaca 34528244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 34151853 - 34151693
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaa-cttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagg 170  Q
    ||||||||||| |||||||||||  ||||||||| |||||||  |||||||||||||||||||||| |||||||| |||||||||||| ||||| |||||    
T  34151853 accacaaaacaacaatgcaataggattcaaaaaaacttacttggttttgtgattgaaattggcttggaatgacttcaaattgctcaaaatcgcatctagg 34151754  T
Q  171 aaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    | ||  |||||| ||||||||||||||| |||||||| || ||| |||| | |||||||||    
T  34151753 agaataaaaaacataacaatggagttttagaaactcccatatctgttctgtacttataaca 34151693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 72 - 211
Target Start/End: Original strand, 28083825 - 28083964
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || |||||||||||  |||||||||||||||| ||||||||||||||||||||||| ||||| || ||||  |||||| |||||||| |||    
T  28083825 accacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatgaattcaaatgactcaaaatcgcaccttgga 28083924  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatg 211  Q
     ||  ||||||| |||||||||||||||||||||||||||    
T  28083925 taataaaaaacgcaacaatggagttttggaaactcctatg 28083964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 72 - 194
Target Start/End: Complemental strand, 49422328 - 49422206
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| |||||||||||  |||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||| ||| ||||||||||||    
T  49422328 accacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatggcttgaaattgctgaaaatcgcacctagga 49422229  T
Q  172 aaaccaaaaacgtaacaatggag 194  Q
     | | ||||||| ||||||||||    
T  49422228 gatcaaaaaacgcaacaatggag 49422206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 72 - 211
Target Start/End: Complemental strand, 40352574 - 40352435
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| ||  ||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||| ||| ||||  |||||| |||||||| |||    
T  40352574 accacaaagcaataatgcaatagaattcaaaaaacttacttgtttttgtgattgaaattggcttgtaatggcttcaaatgactcaaaatcgcaccttgga 40352475  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatg 211  Q
     ||   |||||| |||||||||||||||||||||||||||    
T  40352474 taattcaaaacgcaacaatggagttttggaaactcctatg 40352435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 72 - 211
Target Start/End: Complemental strand, 41793602 - 41793463
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || |||||||||||  |||||||||||||||| ||||||||||| ||||||||||  |||| ||| ||||  |||||| |||||||| | |    
T  41793602 accacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaaatcgcaccttgaa 41793503  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatg 211  Q
    |||  ||||||| |||||||||||||||||||||||||||    
T  41793502 aaattaaaaacgcaacaatggagttttggaaactcctatg 41793463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 74 - 233
Target Start/End: Complemental strand, 51026290 - 51026132
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||| |||||||||||||  ||||||||||||||||  ||||||| |||||||||||||| |||||||     ||||| |||  |||||||  ||||    
T  51026290 cacaaaatagcaatgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttggaatgactgatgtttgctgaaaaacgcacctgagaaa 51026191  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataacaga 233  Q
     || ||||||||||||||||||||||||||||||||||| | |||| ||| |||||||||    
T  51026190 tccgaaaacgtaacaatggagttttggaaactcctatgt-tgttctgttcatataacaga 51026132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 72 - 211
Target Start/End: Original strand, 55799364 - 55799503
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || ||| |||||||  |||||||||||||||| ||||||||||| ||||||||||  |||| ||| ||||  |||||| |||||||| | |    
T  55799364 accacaaagcaacaaagcaataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaaatcgcaccttgaa 55799463  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatg 211  Q
    |||  ||||||| |||||||||||||||||||||||||||    
T  55799464 aaattaaaaacgcaacaatggagttttggaaactcctatg 55799503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 74 - 211
Target Start/End: Complemental strand, 36774946 - 36774809
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||| |||||||||||||| ||||||||||||||||  ||||||| |||||||| ||||| |||| |||    ||  | ||||||||||||| | ||    
T  36774946 cacaaaatagcaatgcaatagaattcaaaaaacttacttgattttgtgcttgaaattcgcttggaatggcttatgctttgtgaaattcgcacctatggaa 36774847  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatg 211  Q
     | |||||||||||||||||||||||||||||||||||    
T  36774846 gcaaaaaacgtaacaatggagttttggaaactcctatg 36774809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 97 - 233
Target Start/End: Complemental strand, 43887712 - 43887577
Alignment:
Q  97 ttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagtt 196  Q
    ||||||||||||||||  ||||||| |||||||||||||| ||||||||    ||  | ||||||||||||| | || | ||||||||||||||||||||    
T  43887712 ttcaaaaaacttacttgattttgtgcttgaaattggcttggaatgacttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtt 43887613  T
Q  197 ttggaaactcctatgtctattctattcttataacaga 233  Q
    ||||||||||||||| || |||| ||| |||||||||    
T  43887612 ttggaaactcctatg-ctgttctgttcatataacaga 43887577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 97 - 211
Target Start/End: Complemental strand, 6176090 - 6175976
Alignment:
Q  97 ttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagtt 196  Q
    |||||||||||||||| ||||||||||| ||||||||||  |||| ||| ||||  |||||| ||||||||   ||||  ||||||| ||||||||||||    
T  6176090 ttcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaaatcgcaccttcaaaaattaaaaacgcaacaatggagtt 6175991  T
Q  197 ttggaaactcctatg 211  Q
    |||||||||||||||    
T  6175990 ttggaaactcctatg 6175976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 97 - 211
Target Start/End: Original strand, 49096178 - 49096292
Alignment:
Q  97 ttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagtt 196  Q
    |||||||||||||||| ||||||||||| ||||||||||  |||| ||| ||||  |||||| ||||||||   ||||  ||||||| ||||||||||||    
T  49096178 ttcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaaatcgcaccttcaaaaattaaaaacgcaacaatggagtt 49096277  T
Q  197 ttggaaactcctatg 211  Q
    |||||||||||||||    
T  49096278 ttggaaactcctatg 49096292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 236
Target Start/End: Complemental strand, 4910028 - 4909896
Alignment:
Q  104 aacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagttttggaaa 203  Q
    |||||||||  ||||||| |||||||| ||||| ||||||||    ||| | ||| ||||||||| |||  | ||||||| |||||||| ||||||||||    
T  4910028 aacttacttgattttgtgcttgaaattagcttggaatgacttatgcttggtgaaaatcgcacctaagaattcaaaaaacgcaacaatggtgttttggaaa 4909929  T
Q  204 ctcctatgtctattctattcttataacagatca 236  Q
    || ||||| || |||| ||||||||||||||||    
T  4909928 cttctatgcctgttctgttcttataacagatca 4909896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 21410265 - 21410205
Alignment:
Q  177 aaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataacagatcaa 237  Q
    ||||||| |||||||||||||||||||||||||||||| || | |||||||||||||||||    
T  21410265 aaaaacgcaacaatggagttttggaaactcctatgtctgttttgttcttataacagatcaa 21410205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 37959568 - 37959713
Alignment:
Q  75 acaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaa 174  Q
    |||| ||| |||||||| ||  |||||||||||||||| ||||||||||||||||||||||| ||||          ||  ||| ||||||||| || ||    
T  37959568 acaatacaacaatgcaacaggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatg----------gcagaaaatcgcacctaagagaa 37959657  T
Q  175 ccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataac 230  Q
      |||| || ||||||||||||||||||||||| ||||||||| | ||||||||||    
T  37959658 tgaaaaccgcaacaatggagttttggaaactcccatgtctattatgttcttataac 37959713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 97 - 211
Target Start/End: Original strand, 22438379 - 22438493
Alignment:
Q  97 ttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagtt 196  Q
    ||||||||||||||||  ||||||| ||||||||| |||  |||| |||    ||  | ||||||||||||| | || | ||||||||||||||||||||    
T  22438379 ttcaaaaaacttacttgattttgtgcttgaaattgtctttgaatggcttatggtttgtgaaattcgcacctatggaagcaaaaaacgtaacaatggagtt 22438478  T
Q  197 ttggaaactcctatg 211  Q
    ||||||||| |||||    
T  22438479 ttggaaacttctatg 22438493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 114 - 236
Target Start/End: Original strand, 47312927 - 47313049
Alignment:
Q  114 tttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagttttggaaactcctatgtc 213  Q
    |||||||| |||||||||||||| |||||||| |  |||   ||| ||||||||| | || |||||| || ||||||||||||||||||| ||  ||| |    
T  47312927 tttttgtgtttgaaattggcttggaatgacttaaccttgtaaaaaatcgcacctatggaacccaaaaccgcaacaatggagttttggaaattctcatgcc 47313026  T
Q  214 tattctattcttataacagatca 236  Q
    | || | ||||||||||||||||    
T  47313027 tgttttgttcttataacagatca 47313049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 34151922 - 34151873
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatataatcgaaattcaac 51  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||| |||    
T  34151922 tatcctaacatatcataaaatcaataaaacctatataattgaaatttaac 34151873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 44558963 - 44558918
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatataatcgaaatt 47  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||    
T  44558963 tatcctaacatatcataaaatcaataaaacctatataatcaaaatt 44558918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 51426846 - 51426797
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatataatcgaaattcaac 51  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||| |||    
T  51426846 tatcctaacatatcataaaatcaataaaacctatataatcaaaatttaac 51426797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 145
Target Start/End: Original strand, 9718977 - 9719048
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgactt 145  Q
    ||||||||| ||||| ||||   ||||||||||||||||  |||| || |||||||||||||||||||||||    
T  9718977 cacaaaacaacaatgaaataagattcaaaaaacttacttgattttatgcttgaaattggcttgaaatgactt 9719048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 21171257 - 21171307
Alignment:
Q  182 cgtaacaatggagttttggaaactcctatgtctattctattcttataacaga 233  Q
    ||||||||||||||||||||||||||||| | |||||||||| |||||||||    
T  21171257 cgtaacaatggagttttggaaactcctatat-tattctattcatataacaga 21171307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 9491029 - 9491071
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatataatcgaa 44  Q
    ||||||||||||| ||||||||||||||| |||||||||||||    
T  9491029 tatcctaacatatcataaaatcaataaaatctatataatcgaa 9491071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 24076809 - 24076857
Alignment:
Q  185 aacaatggagttttggaaactcctatgtctattctattcttataacaga 233  Q
    ||||||||||||||||||| |||||||||| || | |||||||||||||    
T  24076809 aacaatggagttttggaaattcctatgtctgttatgttcttataacaga 24076857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 47
Target Start/End: Original strand, 49572674 - 49572705
Alignment:
Q  16 ataaaatcaataaaacctatataatcgaaatt 47  Q
    ||||||||||||||||||||||||||||||||    
T  49572674 ataaaatcaataaaacctatataatcgaaatt 49572705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 198
Target Start/End: Original strand, 2774736 - 2774861
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaa-aacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaa 172  Q
    ||||||| ||||| |||||||  ||||||| |||||||||  ||||||| |||||||||||||| |||| |||    ||  | ||||||||||||| | |    
T  2774736 cacaaaatagcaacgcaataggattcaaaaaaacttacttgattttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctatgga 2774835  T
Q  173 aaccaaaaacgtaacaatggagtttt 198  Q
    | | |||||||||||| | |||||||    
T  2774836 agcaaaaaacgtaacagtagagtttt 2774861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 233
Target Start/End: Complemental strand, 8866958 - 8866830
Alignment:
Q  105 acttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagttttggaaac 204  Q
    ||||||||  ||||||| ||| |||||| ||| |||||||| |  |||   ||| ||||||||| | ||  ||||| || ||||||||||||||||| |     
T  8866958 acttacttgattttgtgtttgtaattggtttggaatgacttaagcttggagaaaatcgcacctatggaactcaaaaccgcaacaatggagttttggacat 8866859  T
Q  205 tcctatgtctattctattcttataacaga 233  Q
    |||||||| | || | |||||||||||||    
T  8866858 tcctatgtttgttttgttcttataacaga 8866830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 5e-57; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 71 - 231
Target Start/End: Original strand, 25499721 - 25499881
Alignment:
Q  71 aaccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagg 170  Q
    |||||||||||| |||||||||||  |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  25499721 aaccacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttgtaatgacttgaaattgctcaaaatcgcacctagg 25499820  T
Q  171 aaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    | | | ||||| |||||||||||||||||||||||||||||||| |||| |||||||||||    
T  25499821 agatcaaaaaatgtaacaatggagttttggaaactcctatgtctgttctgttcttataaca 25499881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 2 - 231
Target Start/End: Complemental strand, 34682564 - 34682336
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatataatcgaaattcaacnnnnnnnnnnnnnnnntttaaccacaaaacagcaatgcaatagagttcaa 101  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||                ||  ||||||||||| |||||||||||| |||||    
T  34682564 tatcctaacatatcataaaatcaataaaacctatataatcgaaatttaacaaaaaaaaaaaacaa-ttcgaccacaaaacaacaatgcaatagaattcaa 34682466  T
Q  102 aaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagttttgga 201  Q
    ||||||||||| || ||||||||||||||  |||| |||||||| |||||||||||| |||||||||||| ||  |||||||||||||||||||||||||    
T  34682465 aaaacttacttgttcttgtgattgaaattaacttggaatgacttcaaattgctcaaaatcgcacctaggagaataaaaaacgtaacaatggagttttgga 34682366  T
Q  202 aactcctatgtctattctattcttataaca 231  Q
    ||||| |||||||  ||| | |||||||||    
T  34682365 aactcatatgtctggtctgtacttataaca 34682336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 541162 - 541006
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| |||||||||||  |||| ||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||| | |||   ||||    
T  541162 accacaaaacaacaatgcaataggattcagaaaacttacttgtttttgtgattgaaattggcttggaatgacttcaaattgctcaaaatagca---agga 541066  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     ||  ||||||| ||||| |||||||||||||||||||||||| |||| |||||||||||    
T  541065 gaataaaaaacgcaacaagggagttttggaaactcctatgtctgttctgttcttataaca 541006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 72 - 212
Target Start/End: Complemental strand, 6034 - 5894
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || |||||||||||  |||||||||||||||| ||||||||||||||||||||||| |||| ||| ||||  |||||| |||||||| |||    
T  6034 accacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatggcttcaaatgactcaaaatcgcaccttgga 5935  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgt 212  Q
     || |||||||| ||||||||||||||||||||||||||||    
T  5934 taatcaaaaacgcaacaatggagttttggaaactcctatgt 5894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 71 - 231
Target Start/End: Complemental strand, 41799059 - 41798898
Alignment:
Q  71 aaccacaaaacagcaatgcaata-gagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctag 169  Q
    |||| ||||||| |||||||||| || |  ||||||||||||| ||||||||||||||||||||||| |||| |||||||| ||||||| |||||| | |    
T  41799059 aaccgcaaaacaacaatgcaataagattaaaaaaaacttacttgtttttgtgattgaaattggcttggaatgtcttgaaatagctcaaaatcgcacattg 41798960  T
Q  170 gaaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    || | | |||||||||||||||||||||||||||||||||||| | || | |||||||||||    
T  41798959 gagatcaaaaaacgtaacaatggagttttggaaactcctatgtttgttatgttcttataaca 41798898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 71 - 202
Target Start/End: Complemental strand, 35926597 - 35926466
Alignment:
Q  71 aaccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagg 170  Q
    |||| |||||||||||||||||||  ||||||||||||| || | ||||||||||||||   |||| |||| |||||||||||||||| |||||||||||    
T  35926597 aaccccaaaacagcaatgcaataggattcaaaaaacttatttttctttgtgattgaaatgttcttggaatggcttgaaattgctcaaaatcgcacctagg 35926498  T
Q  171 aaaaccaaaaacgtaacaatggagttttggaa 202  Q
    | ||| ||||||||||||||||||||||||||    
T  35926497 agaacaaaaaacgtaacaatggagttttggaa 35926466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 72 - 229
Target Start/End: Complemental strand, 41201966 - 41201809
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| |||||||||||  || |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||| || |||||    
T  41201966 accacaaaacaacaatgcaataggatttaaaaaacttacttatttttgtgattgaaattggcttaaaatggcttgaaattgctcaaaatcgtacgtagga 41201867  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataa 229  Q
       | ||||||||||||||  ||||||| || || |||||||| || | |||||||||    
T  41201866 gctcaaaaaacgtaacaataaagttttgaaatcttctatgtctgttatgttcttataa 41201809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 8574959 - 8574801
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || ||||||||||   |||||||||||||||| ||||||||||||||||||||||| |||| ||| ||||  |||||| |||||||| |||    
T  8574959 accacaaagcaacaatgcaataagattcaaaaaacttacttgtttttgtgattgaaattggcttgtaatggcttcaaatgactcaaaatcgcaccttgga 8574860  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     ||   |||||| ||||||||||||||||||||||||||| |  ||||||||||||||||    
T  8574859 taattcaaaacgcaacaatggagttttggaaactcctatg-cagttctattcttataaca 8574801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 72 - 231
Target Start/End: Original strand, 11348336 - 11348494
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || |||||||||||  || |||| |||||||| ||||||||||||||||||||||| |||  ||| ||||  |||||| |||||||| |||    
T  11348336 accacaaagcaacaatgcaataggattaaaaacacttacttgtttttgtgattgaaattggcttggaatagcttcaaatgactcaaaatcgcaccttgga 11348435  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     || |||||||| ||||||||||||||||||||||||||| || |||| |||||||||||    
T  11348436 taatcaaaaacgcaacaatggagttttggaaactcctatg-ctgttctgttcttataaca 11348494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 72 - 211
Target Start/End: Complemental strand, 19035476 - 19035337
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || |||||||||||  |||||||||||||||| ||||||||||| ||||||||||  |||| ||| ||||  |||||| |||||||| | |    
T  19035476 accacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaaatcgcaccttgaa 19035377  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatg 211  Q
    |||  ||||||| |||||||||||||||||||||||||||    
T  19035376 aaattaaaaacgcaacaatggagttttggaaactcctatg 19035337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 97 - 211
Target Start/End: Complemental strand, 27660153 - 27660039
Alignment:
Q  97 ttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagtt 196  Q
    |||||||||||||||| ||||||||||||||||||||||| |||| ||| ||||  |||||| |||||||| ||| ||  ||||||| ||||||||||||    
T  27660153 ttcaaaaaacttacttgtttttgtgattgaaattggcttgtaatggcttcaaatgactcaaaatcgcaccttggataattaaaaacgcaacaatggagtt 27660054  T
Q  197 ttggaaactcctatg 211  Q
    |||||||||||||||    
T  27660053 ttggaaactcctatg 27660039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 72 - 212
Target Start/End: Original strand, 11028839 - 11028979
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || |||||||||||  |||||||||||||||| ||||||||||||||||||||||| |||||||| ||||   || || ||||| ||  ||    
T  11028839 accacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttgtaatgacttaaaatgattcgaaatcgcaactttga 11028938  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgt 212  Q
     |  |||||||| ||||||||||||||||||||||||||||    
T  11028939 tactcaaaaacgcaacaatggagttttggaaactcctatgt 11028979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 72 - 212
Target Start/End: Original strand, 38855546 - 38855686
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || |||||||||||  |||||||||||||||| ||||||||||||||||||||||| |||| ||| ||||   ||||| ||||| ||  ||    
T  38855546 accacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttgtaatggcttcaaatgattcaaaatcgcaactttga 38855645  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgt 212  Q
     |  |||||||| ||||||||||||||||||||||||||||    
T  38855646 tactcaaaaacgcaacaatggagttttggaaactcctatgt 38855686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 75 - 211
Target Start/End: Original strand, 8539381 - 8539516
Alignment:
Q  75 acaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaa 174  Q
    ||||| || |||||||||||  |||||||||||||||| |||||||||||| |||||| ||| |||||||| ||||  |||||| |||||| | ||| ||    
T  8539381 acaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattggaattggtttggaatgacttcaaatgactcaaaatcgcacattggataa 8539480  T
Q  175 ccaaaaacgtaacaatggagttttggaaactcctatg 211  Q
      ||||||| |||||||||||||||||||||||||||    
T  8539481 -aaaaaacgcaacaatggagttttggaaactcctatg 8539516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 117 - 231
Target Start/End: Original strand, 30887256 - 30887371
Alignment:
Q  117 ttgtgattgaaa-ttggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagttttggaaactcctatgtcta 215  Q
    |||||||||||| |||||||| |||| |||||||| ||||||| |||||| | ||| | | ||||||||||||||||||||||||||||||||||||||     
T  30887256 ttgtgattgaaaattggcttggaatggcttgaaatagctcaaaatcgcacattggagatcaaaaaacgtaacaatggagttttggaaactcctatgtctg 30887355  T
Q  216 ttctattcttataaca 231  Q
    || | |||||||||||    
T  30887356 ttatgttcttataaca 30887371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 74 - 233
Target Start/End: Complemental strand, 36348866 - 36348708
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||| |||||||||||||| ||||||||||||||||  ||||||| |||||||||||||| ||||| ||    ||  | |||||| || ||| | ||    
T  36348866 cacaaaatagcaatgcaatagaattcaaaaaacttacttgattttgtgcttgaaattggcttggaatgatttatgctttgtgaaattcacatctatggaa 36348767  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataacaga 233  Q
     | ||||||||||||||||||||||||||||||||||| || |||| ||| |||||||||    
T  36348766 gcaaaaaacgtaacaatggagttttggaaactcctatg-ctgttctgttcatataacaga 36348708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 74 - 211
Target Start/End: Complemental strand, 7483994 - 7483857
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||| ||||| |||||||  || |||||||||||||  ||||||| ||||||||||||||||||| |||    ||  | ||||||||||||| | ||    
T  7483994 cacaaaatagcaacgcaataggattaaaaaaacttacttgattttgtgcttgaaattggcttgaaatggcttatggtttgtgaaattcgcacctatggaa 7483895  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatg 211  Q
     | |||||||||||||||||||||||||||||||||||    
T  7483894 gcaaaaaacgtaacaatggagttttggaaactcctatg 7483857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 18309823 - 18310040
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatataatcgaaattcaacnnnnnnnnnnnnnnnntttaaccacaaaacagcaatgcaatagagttcaa 101  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||                ||  ||||||||||| |||||||||||  |||||    
T  18309823 tatcctaacatatcataaaatcaataaaacctatataatcgaaatttaacaaaaaaaacaaacaa-ttcgaccacaaaacaacaatgcaataggattcaa 18309921  T
Q  102 aaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagttttgga 201  Q
    ||||||||||| ||||||||||||||||||||||| ||||          ||  ||| ||||||||| || ||  ||||  | |||||||||||||||||    
T  18309922 aaaacttacttgtttttgtgattgaaattggcttggaatg----------gcagaaaatcgcacctaagagaatgaaaactgcaacaatggagttttgga 18310011  T
Q  202 aactcctatgtctattctattcttataac 230  Q
    ||||||||||||| || | ||||||||||    
T  18310012 aactcctatgtctgttatgttcttataac 18310040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 103 - 229
Target Start/End: Complemental strand, 1398811 - 1398685
Alignment:
Q  103 aaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagttttggaa 202  Q
    |||||| ||| ||||| | |||||||||| |||  |||  |||||||||||||||| |||||||||||| | | |||||  |||||||||||||||| ||    
T  1398811 aaacttgcttgttttttttattgaaattgacttagaattgcttgaaattgctcaaaatcgcacctaggagatcaaaaaatataacaatggagttttgaaa 1398712  T
Q  203 actcctatgtctattctattcttataa 229  Q
    |||||||||||  |||| |||||||||    
T  1398711 actcctatgtcagttctgttcttataa 1398685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 74 - 211
Target Start/End: Original strand, 1696461 - 1696598
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||| |||||||||||||  ||||||||||||| ||  ||||||| ||||||||| |||| |||| |||    ||  | ||||||||||||| | ||    
T  1696461 cacaaaatagcaatgcaataggattcaaaaaacttaattgattttgtgcttgaaattgacttggaatggcttattcttcgtgaaattcgcacctatggaa 1696560  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatg 211  Q
     | ||||||||||||| |||||||||||||||||||||    
T  1696561 gcaaaaaacgtaacaaaggagttttggaaactcctatg 1696598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 74 - 211
Target Start/End: Complemental strand, 41088370 - 41088233
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||| ||||| |||||||  ||||||||||||||||  ||||||| |||||||||||||  |||| |||    ||  | ||||||||||||| | ||    
T  41088370 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatggcttatggtttgtgaaattcgcacctatggaa 41088271  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatg 211  Q
     | |||||||||||||||||||||||| ||||||||||    
T  41088270 gcaaaaaacgtaacaatggagttttggtaactcctatg 41088233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 72 - 211
Target Start/End: Original strand, 30710995 - 30711133
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || |||| ||||||| |||||||||||||||| ||||||| ||| ||||||||||| |||| ||| ||||  |||||| |||||||| |||    
T  30710995 accacaaagcaacaatacaatagaattcaaaaaacttacttgtttttgttattaaaattggcttgtaatggcttcaaatgactcaaaatcgcaccttgga 30711094  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatg 211  Q
     ||   |||||| ||   ||||||||||||||||||||||    
T  30711095 taa-ttaaaacgcaaacttggagttttggaaactcctatg 30711133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 212
Target Start/End: Complemental strand, 6791963 - 6791814
Alignment:
Q  69 ttaaccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcaccta 168  Q
    |||| ||||||| |||||||||||||  ||||||||||||||||  ||||||| |||||||||||||  ||||||||    ||  | |||||||||||||    
T  6791963 ttaatcacaaaatagcaatgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttagaatgacttatgctttatgaaattcgcaccta 6791864  T
Q  169 ggaaaaccaaaaacg------taacaatggagttttggaaactcctatgt 212  Q
     |||| | |||||||      |||||||||| ||||||||||||||||||    
T  6791863 tgaaagcaaaaaacgtaacaataacaatggaattttggaaactcctatgt 6791814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 74 - 209
Target Start/End: Original strand, 1973095 - 1973230
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||| |||||||| ||||  ||||||||| ||||||  ||||||| |||||||| ||||| |||| |      ||||| |||  |||||||  ||||    
T  1973095 cacaaaatagcaatgccataggattcaaaaaatttacttgattttgtgcttgaaattagcttggaatggccgatgtttgctgaaaaacgcacctgagaaa 1973194  T
Q  174 accaaaaacgtaacaatggagttttggaaactccta 209  Q
     |||||||||||||||||||||||||||||||||||    
T  1973195 tccaaaaacgtaacaatggagttttggaaactccta 1973230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 72 - 229
Target Start/End: Original strand, 3602994 - 3603140
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| || |||||||   |||||| ||||||||| ||||||||||||||||||||||| ||||          ||  ||| ||||||||| ||    
T  3602994 accacaaaacaaca-tgcaatatgattcaaagaacttacttgtttttgtgattgaaattggcttggaatg----------gcagaaaatcgcacctaaga 3603082  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataa 229  Q
     ||  |||| || |||||||||||||||||||||||||||||| |||| |||||||||    
T  3603083 gaatgaaaaccgcaacaatggagttttggaaactcctatgtctgttctgttcttataa 3603140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 74 - 236
Target Start/End: Original strand, 23190679 - 23190841
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||||| |||||||||||  |   || |||||||||| ||||||| |||||||||||||| |||| ||| |  |||   ||| | ||||||| | ||    
T  23190679 cacaaaacaacaatgcaataggatgataacaacttacttaattttgtgcttgaaattggcttggaatggcttaaccttgtcaaaaattgcacctacggaa 23190778  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataacagatca 236  Q
      |||||  | ||||||||||||||||||| || ||||||| |||| ||||||||||||||||    
T  23190779 ctcaaaactgcaacaatggagttttggaaattcgtatgtctgttctgttcttataacagatca 23190841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 143
Target Start/End: Original strand, 20199996 - 20200065
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgac 143  Q
    ||||||||| ||||||||||   ||||||||| |||||| ||||||||||||||||||||||| ||||||    
T  20199996 cacaaaacaacaatgcaataagattcaaaaaatttacttgtttttgtgattgaaattggcttggaatgac 20200065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 25499641 - 25499686
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatataatcgaaatt 47  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  25499641 tatcctaacatatcataaaatcaataaaacctatataatcgaaatt 25499686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 74 - 136
Target Start/End: Original strand, 40937159 - 40937221
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttg 136  Q
    ||||||| |||||||||||||  ||||||||||||||||  ||||||| ||||||||||||||    
T  40937159 cacaaaatagcaatgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttg 40937221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 7401807 - 7401864
Alignment:
Q  176 caaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataacaga 233  Q
    ||||| || ||||||||||||||||||| |||||||||| |||| |||||||||||||    
T  7401807 caaaaccgcaacaatggagttttggaaattcctatgtctgttctgttcttataacaga 7401864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 35566967 - 35567021
Alignment:
Q  177 aaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    ||||||| ||||||||||||||||||||| |||||||| || | |||||||||||    
T  35566967 aaaaacgcaacaatggagttttggaaacttctatgtctgttttgttcttataaca 35567021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 231
Target Start/End: Original strand, 31239720 - 31239766
Alignment:
Q  185 aacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    ||||||||||||||||||| |||||||||| || | |||||||||||    
T  31239720 aacaatggagttttggaaattcctatgtctgttatgttcttataaca 31239766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 207
Target Start/End: Original strand, 40937253 - 40937283
Alignment:
Q  177 aaaaacgtaacaatggagttttggaaactcc 207  Q
    |||||||||||||||||||||||||||||||    
T  40937253 aaaaacgtaacaatggagttttggaaactcc 40937283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 44
Target Start/End: Complemental strand, 1398946 - 1398913
Alignment:
Q  11 atattataaaatcaataaaacctatataatcgaa 44  Q
    |||| |||||||||||||||||||||||||||||    
T  1398946 atatcataaaatcaataaaacctatataatcgaa 1398913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 1e-51; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 55267654 - 55267495
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| |||||||||||  |||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||| ||||||| ||||    
T  55267654 accacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatgacttcaaattgctcaaaatcgcaccaagga 55267555  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     || |||||||| |||||||||||||||||||||||||||| | || |||||||||||||    
T  55267554 gaatcaaaaacgcaacaatggagttttggaaactcctatgtttgttatattcttataaca 55267495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 34645798 - 34645638
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| |||| || |||  |||||||||||||||| |||||||||| |||||||||||| |||| ||||||||||||| || ||||||||||||    
T  34645798 accacaaaacaacaataca-taggattcaaaaaacttacttgtttttgtgatcgaaattggcttggaatggcttgaaattgctccaaatcgcacctagga 34645700  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataacagat 234  Q
     |||||||||||||||||||||| ||||||||||||||||||| || | ||||||||||||||    
T  34645699 gaaccaaaaacgtaacaatggag-tttggaaactcctatgtctgttatgttcttataacagat 34645638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 71 - 231
Target Start/End: Original strand, 43478662 - 43478823
Alignment:
Q  71 aaccacaaaacagcaatgcaatagagttcaaaa-aacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctag 169  Q
    |||| ||||||| |||||||||||  || |||| ||||||||| ||||||||||||||||||||||| |||| |||||||| ||||||| |||||||| |    
T  43478662 aaccgcaaaacaacaatgcaataggattaaaaaaaacttacttgtttttgtgattgaaattggcttggaatggcttgaaatagctcaaaatcgcaccttg 43478761  T
Q  170 gaaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    || | | |||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  43478762 gagatcaaaaaacgtaacaatggagttttggaaactcctatgtctgttctgttcttataaca 43478823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 2267294 - 2267136
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || |||||||||||  |||||||||||||||| ||||||||||||||||||||||| |||||||| ||||  |||||| |||||||| |||    
T  2267294 accacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatgacttcaaatgactcaaaatcgcaccttgga 2267195  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     || |||||||| ||||||||||||||||||||||||||| || |||| |||||||||||    
T  2267194 taatcaaaaacgcaacaatggagttttggaaactcctatg-ctgttctgttcttataaca 2267136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 68 - 231
Target Start/End: Complemental strand, 13894469 - 13894306
Alignment:
Q  68 tttaaccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacct 167  Q
    ||||||| ||||||| |||||||||||  || ||||||| ||||| |||| |||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  13894469 tttaaccgcaaaacaacaatgcaataggattaaaaaaacctacttgttttggtgattgaaattggcttggaatgacttgaaatagctcaaaatcgcacct 13894370  T
Q  168 aggaaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
      || | | |||||| ||||||||||||||||||||||||||||||| |||| |||||||||||    
T  13894369 tcgagatcaaaaaacataacaatggagttttggaaactcctatgtctgttctgttcttataaca 13894306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 34691864 - 34691705
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| |||||||||||  |||| || |||||||| ||||||||||||||||| ||||| |||||||| |||||||||||| ||||| | ||||    
T  34691864 accacaaaacaacaatgcaataggattcagaatacttacttgtttttgtgattgaaattagcttggaatgacttcaaattgctcaaaatcgcagcaagga 34691765  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     || |||||||| |||||||||||||||||||||| ||||||| |||| |||||||||||    
T  34691764 gaatcaaaaacgcaacaatggagttttggaaactcatatgtctgttctgttcttataaca 34691705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 72 - 214
Target Start/End: Complemental strand, 55205506 - 55205364
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| |||||||||||  |||||||||||||||| ||||||||||| ||||||||||| |||||||| |||||||||||| ||||||| ||||    
T  55205506 accacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattaaaattggcttggaatgacttcaaattgctcaaaatcgcaccaagga 55205407  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtct 214  Q
     ||  ||||||| |||||||||||| |||||||||||||||||    
T  55205406 gaataaaaaacgcaacaatggagttatggaaactcctatgtct 55205364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 71 - 231
Target Start/End: Complemental strand, 45099044 - 45098884
Alignment:
Q  71 aaccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagg 170  Q
    |||||||||||| |||||||||||  |||||||||||||||| ||||||||||| |||||| |||| |||| |||||||||||| ||| |||||| ||||    
T  45099044 aaccacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattaaaattgacttggaatggcttgaaattgctgaaaatcgcacatagg 45098945  T
Q  171 aaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    | | | |||||||||||||||||||||||||||||||||| | | || | |||||||||||    
T  45098944 agatcaaaaaacgtaacaatggagttttggaaactcctatattttttttgttcttataaca 45098884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 72 - 212
Target Start/End: Original strand, 50998489 - 50998629
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || |||||||||||  |||||||||||||||| ||||||||||||||||||||||| |||||||| ||||  |||||| |||||||| |||    
T  50998489 accacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatgacttcaaatgactcaaaatcgcaccttgga 50998588  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgt 212  Q
     || |||||||| ||||||||||||||||||||||||||||    
T  50998589 taatcaaaaacgcaacaatggagttttggaaactcctatgt 50998629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 77 - 231
Target Start/End: Original strand, 16484294 - 16484449
Alignment:
Q  77 aaaacagcaatgcaatagagttcaaaaaactta-cttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaac 175  Q
    |||||| |||||||||||  || |||||||||| ||| ||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||| ||| | |    
T  16484294 aaaacaacaatgcaataggattaaaaaaacttaacttgtttttgttattgaaattggcttggaatgacttgaaatagctcaaaatcgcaccttggagatc 16484393  T
Q  176 caaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     |||||||||||||||||||||| ||||||||||||||| |||| |||||||||||    
T  16484394 aaaaaacgtaacaatggagtttttgaaactcctatgtctgttctgttcttataaca 16484449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 24700960 - 24700801
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| ||||||||||   |||||||||||||||| ||||| |||||||| |||||||| ||||||||||||||||||||| |||||||| |||    
T  24700960 accacaaaacaacaatgcaataagattcaaaaaacttacttgtttttttgattgaatttggcttggaatgacttgaaattgctcaaaatcgcaccttgga 24700861  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     ||  ||||||| |||||||||||||||||||||| ||||| | || | |||||||||||    
T  24700860 gaagaaaaaacgcaacaatggagttttggaaactcatatgtgtgttatgttcttataaca 24700801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 68 - 229
Target Start/End: Complemental strand, 51694121 - 51693960
Alignment:
Q  68 tttaaccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacct 167  Q
    ||||||| ||||||| ||||||||||   ||  |||||||||||| |||||||||||||||||| |||| ||||||||||||| ||||||| ||||||||    
T  51694121 tttaaccgcaaaacaacaatgcaataagattagaaaaacttacttgtttttgtgattgaaattgacttggaatgacttgaaatagctcaaaatcgcacct 51694022  T
Q  168 aggaaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataa 229  Q
     ||| |   ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||    
T  51694021 tggagattaaaaaatgtaacaatggagttttgaaaactcctatgtctgttctattcttataa 51693960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 71 - 212
Target Start/End: Complemental strand, 52567998 - 52567857
Alignment:
Q  71 aaccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagg 170  Q
    |||||||||||| ||||||||||   |||||||||||||||| |||||||||||||||||| |||| |||||||| |||||||||| | ||||||| |||    
T  52567998 aaccacaaaacaacaatgcaatatgattcaaaaaacttacttgtttttgtgattgaaattgacttggaatgacttcaaattgctcacaatcgcaccaagg 52567899  T
Q  171 aaaaccaaaaacgtaacaatggagttttggaaactcctatgt 212  Q
    | ||  ||||||| ||||||||||||||||||||||||||||    
T  52567898 agaataaaaaacgcaacaatggagttttggaaactcctatgt 52567857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 44490584 - 44490425
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||| || ||| | |||    
T  44490584 accacaaaacaacaatgcaataagattcaaaaaacttacttgtttttgtgattgaaattggcttggaatgtcttgaaattgctcaaaatcacacattgga 44490485  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     |   ||||||||||||||| ||||||||||||| |||| |||||||  |||||||||||    
T  44490484 gataaaaaaacgtaacaatgaagttttggaaactgctatatctattccgttcttataaca 44490425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 76 - 219
Target Start/End: Complemental strand, 49217325 - 49217182
Alignment:
Q  76 caaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaac 175  Q
    ||||||| |||||||||||  || ||||||||||||| ||||||||||||||||||| ||| ||||||||||||| ||||||| | |||||| | | | |    
T  49217325 caaaacaacaatgcaataggattaaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttgaaatagctcaaaattgcaccttgaagatc 49217226  T
Q  176 caaaaacgtaacaatggagttttggaaactcctatgtctattct 219  Q
     |||||||||||||||||||||||||||||||||||||| ||||    
T  49217225 aaaaaacgtaacaatggagttttggaaactcctatgtctgttct 49217182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 73 - 231
Target Start/End: Original strand, 41805510 - 41805668
Alignment:
Q  73 ccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaa 172  Q
    |||||||||| |||||||||||  || ||||||||||||| ||||||||||||||||||  ||| |||||||| |||||||||||| ||||||| ||||     
T  41805510 ccacaaaacaacaatgcaataggattaaaaaaacttacttgtttttgtgattgaaattgatttggaatgacttcaaattgctcaaaatcgcaccaaggag 41805609  T
Q  173 aaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    ||  ||||||  |||||||||||||| ||||||| ||||||| |||| |||||||||||    
T  41805610 aataaaaaacacaacaatggagttttagaaactcttatgtctgttctgttcttataaca 41805668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 72 - 219
Target Start/End: Original strand, 43571518 - 43571667
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctag-- 169  Q
    ||||||||||| |||||||||||  |||||||||||||||| ||| |||||||||||||| |||| |||| ||| |||||||||||| ||||||||||      
T  43571518 accacaaaacaacaatgcaataggattcaaaaaacttacttgtttctgtgattgaaattgacttggaatggcttcaaattgctcaaaatcgcacctagga 43571617  T
Q  170 gaaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattct 219  Q
    ||| |  ||||||||||||||||||||||| |||||||||||||| ||||    
T  43571618 gaataaaaaaaacgtaacaatggagttttgaaaactcctatgtctgttct 43571667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 4002951 - 4002794
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| |||||||||||  ||| |||||||||||| ||||||||||| ||||||||||| ||| |||| ||||  |||||| |||||||| |||    
T  4002951 accacaaaacaacaatgcaataggattctaaaaacttacttgtttttgtgatt-aaattggcttggaataacttcaaatgactcaaaatcgcaccttgga 4002853  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     || |||||||| ||||||||||||||||||||||||||| || |||| |||||||||||    
T  4002852 taatcaaaaacgcaacaatggagttttggaaactcctatg-ctgttctgttcttataaca 4002794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 72 - 212
Target Start/End: Original strand, 36136433 - 36136572
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || |||||||||||  |||||||||||||||| ||||||||||||||||||||||| |||||||| ||||  |||||| |||||||| |||    
T  36136433 accacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatgacttcaaatgactcaaaatcgcaccttgga 36136532  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgt 212  Q
     ||  | ||||| |||||| |||||||||||||||||||||    
T  36136533 taa-tataaacgcaacaatagagttttggaaactcctatgt 36136572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 2 - 218
Target Start/End: Complemental strand, 44223329 - 44223114
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatataatcgaaattcaacnnnnnnnnnnnnnnnntttaaccacaaaacagcaatgcaatagagttcaa 101  Q
    ||||||||||||| |||||||||||||||||||||||||  ||||| |||                ||| ||||||||||| |||||| |||   || ||    
T  44223329 tatcctaacatatcataaaatcaataaaacctatataattaaaatttaacaaaaaaagttaaacaatttgaccacaaaacaacaatgcgataagattaaa 44223230  T
Q  102 aaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagttttgga 201  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||| | |||| |||| | | |||||| |||||||| ||||||||||    
T  44223229 aaaacttacttgtttttgtgattgaaattggtttgaaatgacttgaaattactcaaaattgcacgtagg-agatcaaaaatgtaacaatagagttttgga 44223131  T
Q  202 aactcctatgtctattc 218  Q
    |||||| || |||||||    
T  44223130 aactcccatatctattc 44223114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 72 - 211
Target Start/End: Complemental strand, 2645694 - 2645555
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || |||| ||||||  |||||||||||||||| ||||||||||| ||||||||||| |||||||| ||||  |||||| | |||||| |||    
T  2645694 accacaaagcaacaatacaataggattcaaaaaacttacttgtttttgtgattaaaattggcttgtaatgacttcaaatgactcaaaattgcaccttgga 2645595  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatg 211  Q
     ||  ||||||| |||||||||||||||||||||||||||    
T  2645594 taattaaaaacgcaacaatggagttttggaaactcctatg 2645555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 84 - 231
Target Start/End: Complemental strand, 19440483 - 19440336
Alignment:
Q  84 caatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacg 183  Q
    |||||||||||  |||| |||| |||||| |||||||||||||||||| |||||||| |||| |||||| | ||| ||| ||| |||| ||  |||||||    
T  19440483 caatgcaataggattcacaaaagttacttgtttttgtgattgaaattgacttgaaattacttcaaattgtttaaaatcgtaccaaggagaataaaaaacg 19440384  T
Q  184 taacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     |||||||||||||||||||||| ||||||| |||| |||||||||||    
T  19440383 caacaatggagttttggaaactcttatgtctgttctgttcttataaca 19440336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 77 - 236
Target Start/End: Complemental strand, 20374445 - 20374296
Alignment:
Q  77 aaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaacc 176  Q
    |||||| |||||||||||  ||||||||||||||||  ||||||| |||||||||||||| ||||          ||| ||| ||||||||| || ||      
T  20374445 aaaacaacaatgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttggaatg----------gctgaaaatcgcacctaagagaatg 20374356  T
Q  177 aaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataacagatca 236  Q
    ||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  20374355 aaaaacgcaacaatggagttttggaaactcctatgtctgttctgttcttataacagatca 20374296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 97 - 211
Target Start/End: Complemental strand, 2950579 - 2950465
Alignment:
Q  97 ttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagtt 196  Q
    |||||||||||||||| ||||||||||| ||||||||||  |||| ||| ||||  |||||| |||||||| | ||||  ||||||| ||||||||||||    
T  2950579 ttcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaaatcgcaccttgaaaaattaaaaacgcaacaatggagtt 2950480  T
Q  197 ttggaaactcctatg 211  Q
    |||||||||||||||    
T  2950479 ttggaaactcctatg 2950465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 97 - 211
Target Start/End: Original strand, 46406451 - 46406565
Alignment:
Q  97 ttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagtt 196  Q
    |||||||||||||||| ||||||||||| ||||||||||  |||| ||| ||||  |||||| |||||||| | ||||  ||||||| ||||||||||||    
T  46406451 ttcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaaatcgcaccttgaaaaattaaaaacgcaacaatggagtt 46406550  T
Q  197 ttggaaactcctatg 211  Q
    |||||||||||||||    
T  46406551 ttggaaactcctatg 46406565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 74 - 233
Target Start/End: Complemental strand, 42321964 - 42321806
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||| | |||||||||||  ||||||||||||||||  |||| || || |||||||||||||||| |||    ||  | ||||||||||||| | ||    
T  42321964 cacaaaataacaatgcaataggattcaaaaaacttacttgattttttgctttaaattggcttgaaatggcttatgctttgtgaaattcgcacctatggaa 42321865  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataacaga 233  Q
     | ||||||||||||||||||||||||||||||||||| || |||| ||| |||||||||    
T  42321864 gcaaaaaacgtaacaatggagttttggaaactcctatg-ctgttctgttcatataacaga 42321806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 97 - 211
Target Start/End: Complemental strand, 49138827 - 49138713
Alignment:
Q  97 ttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagtt 196  Q
    |||||||||||||||| ||||||||||| ||||||||||  |||| ||| ||||  |||||| ||||||||   ||||  ||||||| ||||||||||||    
T  49138827 ttcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaaatcgcaccttcaaaaattaaaaacgcaacaatggagtt 49138728  T
Q  197 ttggaaactcctatg 211  Q
    |||||||||||||||    
T  49138727 ttggaaactcctatg 49138713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 74 - 212
Target Start/End: Original strand, 51017020 - 51017158
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||| | |||||||||||  ||||||||||||||||  ||||||| | |||||||| ||| ||||||||    ||  | ||||||||||||| | ||    
T  51017020 cacaaaatatcaatgcaataggattcaaaaaacttacttgattttgtgctagaaattggtttggaatgacttatgctttgtgaaattcgcacctatggaa 51017119  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatgt 212  Q
     | ||||||||||||||||||||||||||||||||||||    
T  51017120 gcaaaaaacgtaacaatggagttttggaaactcctatgt 51017158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 74 - 233
Target Start/End: Complemental strand, 50457735 - 50457574
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaatt---cgcacctagg 170  Q
    ||||||| ||| |||||||||  ||||||||||||||||  ||||||| |||||||||||||| |||||||     ||||| |||     |||||||  |    
T  50457735 cacaaaatagcgatgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttggaatgactgacgtttgctaaaaaaaaacgcacctgag 50457636  T
Q  171 aaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataacaga 233  Q
    ||| ||||||||||||||||||||||||||||||||||||| || |||| ||| |||||||||    
T  50457635 aaatccaaaaacgtaacaatggagttttggaaactcctatg-ctgttctgttcatataacaga 50457574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 91 - 211
Target Start/End: Original strand, 54391882 - 54392002
Alignment:
Q  91 atagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaat 190  Q
    ||||| |||||||| ||||||| ||||||||||| ||||||||||  |||| ||| ||||  |||||| ||||||||   ||||  ||||||| ||||||    
T  54391882 atagaattcaaaaagcttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaaatcgcaccttcaaaaattaaaaacgcaacaat 54391981  T
Q  191 ggagttttggaaactcctatg 211  Q
    |||||||||||||||||||||    
T  54391982 ggagttttggaaactcctatg 54392002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 74 - 236
Target Start/End: Original strand, 18441959 - 18442121
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||||| ||||||||||   ||||||| ||||||||  || |||| ||  |||||||||| |||||||| |   || | ||| |||||||||||||     
T  18441959 cacaaaacaacaatgcaatatgattcaaaacacttacttgattatgtgcttagaattggcttggaatgactttagcctggtgaaaatcgcacctaggaat 18442058  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataacagatca 236  Q
    | |||||||| ||||||| |||||| ||||||||||||| | || | ||||||||||||||||    
T  18442059 atcaaaaacgcaacaatgcagttttagaaactcctatgtttgttatgttcttataacagatca 18442121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 74 - 236
Target Start/End: Original strand, 19487033 - 19487195
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||||| ||||||||||   ||||||| ||||||||  || |||| ||  |||||||||| |||||||| |   || | ||| |||||||||||||     
T  19487033 cacaaaacaacaatgcaatatgattcaaaacacttacttgattatgtgcttagaattggcttggaatgactttagcctggtgaaaatcgcacctaggaat 19487132  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataacagatca 236  Q
    | |||||||| ||||||| |||||| ||||||||||||| | || | ||||||||||||||||    
T  19487133 atcaaaaacgcaacaatgcagttttagaaactcctatgtttgttatgttcttataacagatca 19487195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 97 - 211
Target Start/End: Original strand, 34051173 - 34051287
Alignment:
Q  97 ttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagtt 196  Q
    |||||||||||||||| ||||||||||| ||||||||||  |||| ||| ||||  |||||| ||||||||   ||||  ||||||| ||||||| ||||    
T  34051173 ttcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaaatcgcaccttcaaaaattaaaaacgcaacaatgaagtt 34051272  T
Q  197 ttggaaactcctatg 211  Q
    |||||||||||||||    
T  34051273 ttggaaactcctatg 34051287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 74 - 211
Target Start/End: Original strand, 44929199 - 44929336
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||| |||||  ||||||  ||||||||||||||||  ||||||| ||||||||| |||| ||||||||    ||  | ||||||||||||| | ||    
T  44929199 cacaaaatagcaacacaataggattcaaaaaacttacttgattttgtgcttgaaattgacttggaatgacttatgctttgtgaaattcgcacctatggaa 44929298  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatg 211  Q
     | ||||| |||||||||||||||||||||||||||||    
T  44929299 gcaaaaaatgtaacaatggagttttggaaactcctatg 44929336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 72 - 167
Target Start/End: Complemental strand, 3493823 - 3493728
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacct 167  Q
    |||||||| || |||||||||||  |||||||||||||||| ||||||||||||||||||||||  |||| ||| ||||  |||||| ||||||||    
T  3493823 accacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttctaatggcttcaaatgactcaaaatcgcacct 3493728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 72 - 167
Target Start/End: Complemental strand, 3497517 - 3497422
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacct 167  Q
    |||||||| || |||||||||||  |||||||||||||||| ||||||||||||||||||||||  |||| ||| ||||  |||||| ||||||||    
T  3497517 accacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttctaatggcttcaaatgactcaaaatcgcacct 3497422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 72 - 230
Target Start/End: Original strand, 7247705 - 7247853
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||| |||||||||||| |||| ||||||   ||||          |||||||| ||    
T  7247705 accacaaaacaacaatgcaataggattcaaaaaacttacttatttttttgattgaaattgacttggaatgacagaaaat----------cgcacctaaga 7247794  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataac 230  Q
     ||  |||| || ||||||||||||||||||||| |||||||| || | ||||||||||    
T  7247795 gaataaaaaccgcaacaatggagttttggaaactactatgtctgttatgttcttataac 7247853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 49275125 - 49275239
Alignment:
Q  76 caaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaac 175  Q
    ||||| |||||||||||||  || |||||||||||||| ||||||| |||||||||||||||||||||||    ||  | ||||||||||||| | || |    
T  49275125 caaaatagcaatgcaataggattaaaaaaacttacttaattttgtgcttgaaattggcttgaaatgacttatgctttgtgaaattcgcacctatggaagc 49275224  T
Q  176 caaaaacgtaacaat 190  Q
     ||||||||||||||    
T  49275225 aaaaaacgtaacaat 49275239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 2430112 - 2430176
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttg 136  Q
    ||||||||||| |||||||||||  |||||||||||||||| ||||||||||||||||| |||||    
T  2430112 accacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattagcttg 2430176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 74 - 205
Target Start/End: Complemental strand, 27096224 - 27096093
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||| |||||||||||||||  ||||||| ||||||||  |||| |  ||  |||||||||| |||| ||| |  ||| | ||| |||||||||||||     
T  27096224 cacaacacagcaatgcaataggattcaaaacacttacttgattttttccttagaattggcttggaatggcttaagcttggtgaaaatcgcacctaggaat 27096125  T
Q  174 accaaaaacgtaacaatggagttttggaaact 205  Q
    | |||||||| |||||||||||||||||||||    
T  27096124 atcaaaaacgcaacaatggagttttggaaact 27096093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 72 - 230
Target Start/End: Complemental strand, 46345165 - 46345017
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| ||||||||||   || ||||||||||||| ||||||||||||||||||||||| ||||          |   ||| ||||||||| ||    
T  46345165 accacaaaacaacaatgcaataagattaaaaaaacttacttgtttttgtgattgaaattggcttggaatg----------gtagaaaatcgcacctaaga 46345076  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataac 230  Q
     ||  |||| || ||||||| |||||||||||||||||||||| |||| ||||||||||    
T  46345075 gaatgaaaaccgcaacaatgaagttttggaaactcctatgtctgttctgttcttataac 46345017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 160 - 230
Target Start/End: Original strand, 2432866 - 2432936
Alignment:
Q  160 tcgcacctaggaaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataac 230  Q
    ||||||||| || ||  |||| || |||||||||||||||||||||||||||||| |||||||||||||||    
T  2432866 tcgcacctaagagaatgaaaaccgcaacaatggagttttggaaactcctatgtctgttctattcttataac 2432936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 211
Target Start/End: Complemental strand, 11377482 - 11377345
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||| ||||| ||||| |  ||| ||||||||| ||| ||||||| |||||||||||||| |||| |||    ||  | |||||||||||||   ||    
T  11377482 cacaaaatagcaacgcaattggattcgaaaaacttaattaattttgtgcttgaaattggcttggaatggcttatggtttgtgaaattcgcacctattgaa 11377383  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatg 211  Q
     | |||||||||||||| ||||||||||||||||||||    
T  11377382 gcaaaaaacgtaacaattgagttttggaaactcctatg 11377345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 72 - 230
Target Start/End: Original strand, 41579568 - 41579717
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaa-aacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagg 170  Q
    |||||||||||  ||||||||||  ||||||| ||||||||| ||||||||||||||||||||||| ||||          ||  ||| ||||||||| |    
T  41579568 accacaaaacaataatgcaataggattcaaaaaaacttacttgtttttgtgattgaaattggcttggaatg----------gcagaaaatcgcacctaag 41579657  T
Q  171 aaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataac 230  Q
    | ||  |||| || | |||||||||||||||||||||||||||  |||| ||||||||||    
T  41579658 agaatgaaaaccgcagcaatggagttttggaaactcctatgtcagttctgttcttataac 41579717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 141
Target Start/End: Complemental strand, 34470550 - 34470483
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatg 141  Q
    ||||||| |||||||||||||  ||||||||||||||||  ||||||| |||||||||||||| ||||    
T  34470550 cacaaaatagcaatgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttggaatg 34470483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 43478574 - 43478616
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatataatcgaa 44  Q
    ||||||||||||| ||||||||||||||| |||||||||||||    
T  43478574 tatcctaacatatcataaaatcaataaaatctatataatcgaa 43478616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 43571447 - 43571492
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatataatcgaaatt 47  Q
    |||||||||| || ||||||||||||||||||||||||| ||||||    
T  43571447 tatcctaacacatcataaaatcaataaaacctatataattgaaatt 43571492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 49217402 - 49217357
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatataatcgaaatt 47  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||||||    
T  49217402 tatcccaacatatcataaaatcaataaaatctatataatcgaaatt 49217357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 30194379 - 30194426
Alignment:
Q  185 aacaatggagttttggaaactcctatgtctattctattcttataacaga 233  Q
    |||||||||||||||||||||||||||| | |||||||| |||||||||    
T  30194379 aacaatggagttttggaaactcctatgt-tgttctattcatataacaga 30194426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 210
Target Start/End: Complemental strand, 51011808 - 51011672
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||| ||||| ||| |||  | ||||||| ||||||  ||||||| ||||||||| |||  ||||||||    ||  | ||||||||||||| | ||    
T  51011808 cacaaaatagcaacgcagtaggatacaaaaaatttacttgattttgtgcttgaaattgacttcgaatgacttatggtttgtgaaattcgcacctatggaa 51011709  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctat 210  Q
     | |||||||||||||||||||||| |||||| ||||    
T  51011708 gcaaaaaacgtaacaatggagtttttgaaacttctat 51011672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 10051840 - 10051779
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggctt 135  Q
    ||||||| ||||||||||||   |||||||| |||||||  ||||||| |||||||||||||    
T  10051840 cacaaaatagcaatgcaatatgattcaaaaaccttacttgattttgtgcttgaaattggctt 10051779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 2430030 - 2430066
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatata 38  Q
    ||||||||||||| || ||||||||||||||||||||    
T  2430030 tatcctaacatatcatgaaatcaataaaacctatata 2430066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 44
Target Start/End: Original strand, 41805438 - 41805466
Alignment:
Q  16 ataaaatcaataaaacctatataatcgaa 44  Q
    |||||||||||||||||||||||||||||    
T  41805438 ataaaatcaataaaacctatataatcgaa 41805466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 44
Target Start/End: Complemental strand, 55205582 - 55205554
Alignment:
Q  16 ataaaatcaataaaacctatataatcgaa 44  Q
    |||||||||||||||||||||||||||||    
T  55205582 ataaaatcaataaaacctatataatcgaa 55205554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 44
Target Start/End: Complemental strand, 55267727 - 55267699
Alignment:
Q  16 ataaaatcaataaaacctatataatcgaa 44  Q
    |||||||||||||||||||||||||||||    
T  55267727 ataaaatcaataaaacctatataatcgaa 55267699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 3e-49; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 72 - 231
Target Start/End: Original strand, 43493119 - 43493278
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| |||||||||||  |||||||||||| ||| ||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  43493119 accacaaaacaacaatgcaataggattcaaaaaacttgcttgtttttgtgattgaaattggcttggaatggcttgaaattgctcaaaatcgcacctagga 43493218  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     | | ||||| |||||||||||||||| ||||||||||||||| |||| |||||||||||    
T  43493219 gatcaaaaaatgtaacaatggagtttttgaaactcctatgtctgttctgttcttataaca 43493278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 41497711 - 41497552
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| | |||||||||  |||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||| ||||||| ||||    
T  41497711 accacaaaacaacgatgcaataggattcaaaaaacttacttatttttgtgattgaaattggctttgaatgacttcaaattgctcaaaatcgcaccaagga 41497612  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     ||  ||||||| ||||||||||||||||||| |||||||||| |||| |||||||||||    
T  41497611 gaataaaaaacgcaacaatggagttttggaaaatcctatgtctgttctgttcttataaca 41497552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 73 - 231
Target Start/End: Original strand, 8268585 - 8268743
Alignment:
Q  73 ccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaa 172  Q
    |||||||||| |||| ||||||| |||||||||||||||| ||||||||||||||||||||||  |||| |||||||||||||||| ||||| ||||||     
T  8268585 ccacaaaacaacaattcaatagaattcaaaaaacttacttgtttttgtgattgaaattggcttagaatggcttgaaattgctcaaaatcgcatctaggag 8268684  T
Q  173 aaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    ||  ||||||| |||||||||||||||||||||| |||||||||| | |||||||||||    
T  8268685 aataaaaaacgcaacaatggagttttggaaactcgtatgtctattttgttcttataaca 8268743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 72 - 231
Target Start/End: Original strand, 35493176 - 35493335
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| |||||||||||  || ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| || || || |||    
T  35493176 accacaaaacaacaatgcaataggattaaaaaaacttacttgtttttgtgattgaaattggcttggaatgacttgaaattgctcaaaatcacaacttgga 35493275  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     | | ||||||||||||||||||||||||||||||  |||||| |||| |||||||||||    
T  35493276 gatcaaaaaacgtaacaatggagttttggaaactctcatgtctgttctgttcttataaca 35493335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 40675975 - 40675817
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| |||||||||||  ||||||||||| |||| ||||||||||||||||||||||| |||||||| |||||||||||| ||||| ||||||    
T  40675975 accacaaaacaacaatgcaataggattcaaaaaactgacttgtttttgtgattgaaattggcttggaatgacttcaaattgctcaaaatcgca-ctagga 40675877  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     || |||||| ||||||||| ||||||||||||||| |||||| |||||| |||||||||    
T  40675876 gaatcaaaaatgtaacaatgcagttttggaaactccaatgtctgttctatacttataaca 40675817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 19470195 - 19470037
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| ||||||||||   |||||||||||||||| ||||||| | || |||||||||| ||||||||||||||||||||| ||||||||||||    
T  19470195 accacaaaacaacaatgcaatatgattcaaaaaacttacttgtttttgtaaatggaattggcttggaatgacttgaaattgctcaaaatcgcacctagga 19470096  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    |||  ||||| ||||||||||||||||||||| |||||||| | |||| |||||||||||    
T  19470095 aaa-aaaaaatgtaacaatggagttttggaaattcctatgtttgttctgttcttataaca 19470037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 72 - 231
Target Start/End: Original strand, 23409339 - 23409495
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| |||||||||||  |||||||||||||||| |||  |||||||||||||||||| |||| ||| |||||||||||| ||||||||||||    
T  23409339 accacaaaacaacaatgcaataggattcaaaaaacttacttgttt--gtgattgaaattggcttggaatggcttcaaattgctcaaaatcgcacctagga 23409436  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     ||  |||||||||||||||||||||||||||||||||||||| |||  | |||||||||    
T  23409437 gaa-taaaaacgtaacaatggagttttggaaactcctatgtctgttccgtacttataaca 23409495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 71 - 231
Target Start/End: Original strand, 3943024 - 3943185
Alignment:
Q  71 aaccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagg 170  Q
    |||| ||||||| |||||||||||  || |||||| |||||| ||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||  |    
T  3943024 aaccgcaaaacaacaatgcaataggattaaaaaaatttacttgtttttgtgattgaaattggcttggaatgacttgaaatagctcaaaatcgcacctttg 3943123  T
Q  171 a-aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    | | |  ||||||||||||||||||||||| |||||||||||||| |||| |||||||||||    
T  3943124 agataaaaaaaacgtaacaatggagttttgaaaactcctatgtctgttctgttcttataaca 3943185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 71 - 231
Target Start/End: Original strand, 16583427 - 16583588
Alignment:
Q  71 aaccacaaaacagcaatgcaatagagttcaaaa-aacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctag 169  Q
    |||| ||||||| |||||||||||  || |||| ||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| |    
T  16583427 aaccgcaaaacaacaatgcaataggattaaaaaaaacttacttgtttttgtgattgaaattggcttggaatgacttgaaatagctcaaaatcgcaccttg 16583526  T
Q  170 gaaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    || | | |||| ||| | ||||||||||||||||||||||||||| |||| |||||||||||    
T  16583527 gagatcaaaaagcgtcataatggagttttggaaactcctatgtctgttctgttcttataaca 16583588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 71 - 231
Target Start/End: Original strand, 34639147 - 34639307
Alignment:
Q  71 aaccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagg 170  Q
    |||| ||||||| ||||| |||| | || ||||||||||||| ||||||| ||||||||||||||| |||| |||||||| ||||||| |||||||| ||    
T  34639147 aaccgcaaaacaacaatgtaataaaattaaaaaaacttacttgtttttgttattgaaattggcttggaatggcttgaaatagctcaaaatcgcaccttgg 34639246  T
Q  171 aaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    | | | ||||| ||||||||||||||| |||||||||||||||| || | |||||||||||    
T  34639247 agatcaaaaaatgtaacaatggagtttaggaaactcctatgtctgttttgttcttataaca 34639307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 74 - 212
Target Start/End: Complemental strand, 23719582 - 23719444
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||| |||||||||||||   |||||||||||||||| ||||||| |||||||||||||| ||||||||  | ||  | ||||||||||||| | ||    
T  23719582 cacaaaatagcaatgcaataggactcaaaaaacttacttaattttgtgcttgaaattggcttggaatgacttatactttgtgaaattcgcacctacggaa 23719483  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatgt 212  Q
     | ||||||||||||||||||||||||||||||||||||    
T  23719482 gcaaaaaacgtaacaatggagttttggaaactcctatgt 23719444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 74 - 212
Target Start/End: Complemental strand, 24107254 - 24107116
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||| |||||||||||||   |||||||||||||||| ||||||| |||||||||||||| ||||||||  | ||  | ||||||||||||| | ||    
T  24107254 cacaaaatagcaatgcaataggactcaaaaaacttacttaattttgtgcttgaaattggcttggaatgacttatactttgtgaaattcgcacctacggaa 24107155  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatgt 212  Q
     | ||||||||||||||||||||||||||||||||||||    
T  24107154 gcaaaaaacgtaacaatggagttttggaaactcctatgt 24107116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 71 - 231
Target Start/End: Complemental strand, 29090816 - 29090655
Alignment:
Q  71 aaccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagg 170  Q
    |||| ||||||| |||||||||||  || ||||||||||||| |||||||| |||||||||||||| ||||  ||||||| ||||||| |||||| | ||    
T  29090816 aaccgcaaaacaacaatgcaataggattaaaaaaacttacttgtttttgtggttgaaattggcttggaatgggttgaaatagctcaaaatcgcacattgg 29090717  T
Q  171 aaaac-caaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    | | |  |||||||||||||||||||||||||||||| ||||||| || | |||||||||||    
T  29090716 agatcaaaaaaacgtaacaatggagttttggaaactcgtatgtctgttttgttcttataaca 29090655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 23786364 - 23786204
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| |||||||||||  || | ||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||| ||||| | ||||    
T  23786364 accacaaaacaacaatgcaataggatttagaaaacttacttgtttttgtgattgaaattggcttggaatgacttcaaattgctcaaaatcgcagcaagga 23786265  T
Q  172 -aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     ||   ||||| | ||||||||||||||| |||||||||||| | || | |||||||||||    
T  23786264 gaataaaaaaatgcaacaatggagttttgaaaactcctatgtttgttatgttcttataaca 23786204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 72 - 212
Target Start/End: Original strand, 28476902 - 28477042
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || ||||||| |||  |||| ||||||||||| ||||||||||||||||||||||| |||| ||| ||||  |||||| ||||| || |||    
T  28476902 accacaaagcaccaatgcagtaggattcacaaaacttacttgtttttgtgattgaaattggcttgtaatggcttcaaatgactcaaaatcgcaacttgga 28477001  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgt 212  Q
     || |||||||| ||||||||||||||||||||||||||||    
T  28477002 taatcaaaaacgcaacaatggagttttggaaactcctatgt 28477042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 72 - 211
Target Start/End: Complemental strand, 3936101 - 3935962
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || |||||||||||  |||||||||||||||| ||||||||||| ||||||||||  |||| ||| ||||  |||||| |||||||| | |    
T  3936101 accacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaaatcgcaccttgaa 3936002  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatg 211  Q
    |||  ||||||| |||||||||||||||||||||||||||    
T  3936001 aaattaaaaacgcaacaatggagttttggaaactcctatg 3935962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 72 - 211
Target Start/End: Original strand, 17426200 - 17426339
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || |||||||||||  |||||||||||||||| ||||||||||| ||||||||||  |||| ||| ||||  |||||| |||||||| | |    
T  17426200 accacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaaatcgcaccttgaa 17426299  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatg 211  Q
    |||  ||||||| |||||||||||||||||||||| ||||    
T  17426300 aaattaaaaacgcaacaatggagttttggaaactcatatg 17426339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 72 - 211
Target Start/End: Original strand, 22003236 - 22003375
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| ||  ||||||||||  |||||||||||||||| ||||||||||||||||||||||| |||| ||| ||||  |||||| |||||||| |||    
T  22003236 accacaaagcaagaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttgtaatggcttcaaatgactcaaaatcgcaccttgga 22003335  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatg 211  Q
     ||   |||||| |||||| ||||||||||||||||||||    
T  22003336 taatttaaaacgcaacaattgagttttggaaactcctatg 22003375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 74 - 212
Target Start/End: Original strand, 5422057 - 5422195
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||| ||||| |||||||| ||||||||||||||||  ||||||| ||||||||||||||||||| |||    ||  | ||||||||||||| | ||    
T  5422057 cacaaaatagcaacgcaatagaattcaaaaaacttacttgattttgtgcttgaaattggcttgaaatggcttatggtttgtgaaattcgcacctatggaa 5422156  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatgt 212  Q
     | ||||||||||||||||||||||| ||||||||||||    
T  5422157 gcaaaaaacgtaacaatggagttttgaaaactcctatgt 5422195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 72 - 212
Target Start/End: Complemental strand, 39798681 - 39798541
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || |||||||||||  |||||||||||||||| ||||||||||||||||||||||| |||| ||| ||||   ||||| ||||| ||  ||    
T  39798681 accacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttgtaatggcttaaaatgattcaaaatcgcaactttga 39798582  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgt 212  Q
     |  |||||||| ||||||||||||||| ||||||||||||    
T  39798581 tactcaaaaacgcaacaatggagttttgaaaactcctatgt 39798541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 82 - 211
Target Start/End: Complemental strand, 10359025 - 10358896
Alignment:
Q  82 agcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaa 181  Q
    |||||||||||||  ||||||||||||||||  ||||||| |||||||||||||| |||| ||     ||||| |||  |||||||  |||| |||||||    
T  10359025 agcaatgcaataggattcaaaaaacttacttgattttgtgtttgaaattggcttggaatggctgacgtttgctgaaaaacgcacctgagaaatccaaaaa 10358926  T
Q  182 cgtaacaatggagttttggaaactcctatg 211  Q
    ||||||||||||||||||||||||||||||    
T  10358925 cgtaacaatggagttttggaaactcctatg 10358896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 97 - 211
Target Start/End: Original strand, 43984161 - 43984275
Alignment:
Q  97 ttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagtt 196  Q
    |||||||||||||||| ||||||||||| ||||||||||  |||| ||| ||||  |||||| ||||||||   ||||  ||||||| ||||||||||||    
T  43984161 ttcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaaatcgcaccttcaaaaattaaaaacgcaacaatggagtt 43984260  T
Q  197 ttggaaactcctatg 211  Q
    |||||||||||||||    
T  43984261 ttggaaactcctatg 43984275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 74 - 211
Target Start/End: Complemental strand, 34520202 - 34520065
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||| |||||||||||||  ||||||||||||||||  ||||||| |||||||| ||||| |||| ||     ||||| |||  |||||||  ||||    
T  34520202 cacaaaatagcaatgcaataggattcaaaaaacttacttgattttgtgcttgaaattagcttggaatggctgctgtttgctgaaaaacgcacctgagaaa 34520103  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatg 211  Q
     ||||||||||||||||||| |||||||||||||||||    
T  34520102 tccaaaaacgtaacaatggatttttggaaactcctatg 34520065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 74 - 233
Target Start/End: Complemental strand, 37311199 - 37311041
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||| |||||||||||||  |||| |||||||||||  ||||||| |||||||||||||| | || |||    ||  | ||||||||||||| | ||    
T  37311199 cacaaaatagcaatgcaataggattcagaaaacttacttgattttgtgcttgaaattggcttggattggcttatgctttgtgaaattcgcacctatggaa 37311100  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataacaga 233  Q
     | ||||||||||||||||| |||||||||||||||||| | |||| ||| |||||||||    
T  37311099 gcaaaaaacgtaacaatggatttttggaaactcctatgt-tgttctgttcatataacaga 37311041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 77 - 229
Target Start/End: Original strand, 14181673 - 14181815
Alignment:
Q  77 aaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaacc 176  Q
    |||||| |||||||||||  |||||||||||||||| ||||||||||||||||||||||| |||| || ||||||          |||||| ||| | |     
T  14181673 aaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatggctagaaatt----------gcaccttggatatca 14181762  T
Q  177 aaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataa 229  Q
    |||||||||| ||| ||||||||||||||| ||||||| || | |||||||||    
T  14181763 aaaaacgtaataatagagttttggaaactcttatgtctgttatgttcttataa 14181815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 8268515 - 8268559
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatataatcgaaat 46  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  8268515 tatcctaacatatcataaaatcaataaaacctatataatcgaaat 8268559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 43493025 - 43493068
Alignment:
Q  1 ttatcctaacatattataaaatcaataaaacctatataatcgaa 44  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  43493025 ttatcctaacatatcataaaatcaataaaacctatataatcgaa 43493068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 19470268 - 19470223
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatataatcgaaatt 47  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||    
T  19470268 tatcttaacatatcataaaatcaataaaacctatataatcgaaatt 19470223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 23409268 - 23409313
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatataatcgaaatt 47  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||    
T  23409268 tatcctaacatatcataaaatcaataacacctatataatcgaaatt 23409313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 40676052 - 40676007
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatataatcgaaatt 47  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||    
T  40676052 tatcctaagatatcataaaatcaataaaacctatataatcgaaatt 40676007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 35493094 - 35493136
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatataatcgaa 44  Q
    ||||||||||||| |||||||||| ||||||||||||||||||    
T  35493094 tatcctaacatatcataaaatcaagaaaacctatataatcgaa 35493136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 45435122 - 45435180
Alignment:
Q  153 ctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagttttggaaactcctatg 211  Q
    |||||| |||||||| ||| ||  ||||||| |||||||||||||||||||||||||||    
T  45435122 ctcaaaatcgcaccttggataattaaaaacgcaacaatggagttttggaaactcctatg 45435180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 72 - 141
Target Start/End: Complemental strand, 2917911 - 2917842
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatg 141  Q
    ||||||||||| ||||| |||||  ||||||| | |||||| |||||||| |||||||||||||| ||||    
T  2917911 accacaaaacaacaatgtaataggattcaaaacatttacttgtttttgtgcttgaaattggcttggaatg 2917842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 145
Target Start/End: Complemental strand, 17537391 - 17537320
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgactt 145  Q
    |||||||  ||||||||||||  |||| |||||||||||  ||||||| |||||||| ||||| ||||||||    
T  17537391 cacaaaattgcaatgcaataggattcacaaaacttacttgattttgtgcttgaaattagcttggaatgactt 17537320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 33405662 - 33405710
Alignment:
Q  185 aacaatggagttttggaaactcctatgtctattctattcttataacaga 233  Q
    |||||||||||||||||||||||||||| | |  | |||||||||||||    
T  33405662 aacaatggagttttggaaactcctatgtttgtaatgttcttataacaga 33405710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 6e-47; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 35019815 - 35019656
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| |||||||||||  |||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||| ||||||| ||||    
T  35019815 accacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatgacttcaaattgctcaaaatcgcaccaagga 35019716  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     || |||||||| ||||||||||||||||||||||| |||||| || | || ||||||||    
T  35019715 gaatcaaaaacgcaacaatggagttttggaaactccgatgtctgttatgttattataaca 35019656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 71 - 231
Target Start/End: Original strand, 29076157 - 29076317
Alignment:
Q  71 aaccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagg 170  Q
    |||| ||||||| |||||||||||| || ||||||||||||| ||||||||||||||||||| ||| ||||||||||||| ||||||| |||||| | ||    
T  29076157 aaccgcaaaacaacaatgcaatagaattaaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttgaaatagctcaaaatcgcacttcgg 29076256  T
Q  171 aaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    | | | |||||||||||||||||||||||||||||||||||||| || | |||||||||||    
T  29076257 agatcaaaaaacgtaacaatggagttttggaaactcctatgtctgttttgttcttataaca 29076317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 71 - 231
Target Start/End: Original strand, 29109690 - 29109850
Alignment:
Q  71 aaccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagg 170  Q
    |||| ||||||| |||||||||||| || ||||||||||||| ||||||||||||||||||| ||| ||||||||||||| ||||||| |||||| | ||    
T  29109690 aaccgcaaaacaacaatgcaatagaattaaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttgaaatagctcaaaatcgcacttcgg 29109789  T
Q  171 aaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    | | | |||||||||||||||||||||||||||||||||||||| || | |||||||||||    
T  29109790 agatcaaaaaacgtaacaatggagttttggaaactcctatgtctgttttgttcttataaca 29109850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 71 - 231
Target Start/End: Original strand, 29111130 - 29111290
Alignment:
Q  71 aaccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagg 170  Q
    |||| ||||||| |||||||||||| || ||||||||||||| ||||||||||||||||||| ||| ||||||||||||| ||||||| |||||| | ||    
T  29111130 aaccgcaaaacaacaatgcaatagaattaaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttgaaatagctcaaaatcgcacttcgg 29111229  T
Q  171 aaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    | | | |||||||||||||||||||||||||||||||||||||| || | |||||||||||    
T  29111230 agatcaaaaaacgtaacaatggagttttggaaactcctatgtctgttttgttcttataaca 29111290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 34801743 - 34801583
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttt-tgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagg 170  Q
    |||||||||||  ||||||||||  |||||||||||||||| |||| ||||||||||||||||||| |||| ||| |||||||||||| |||||||||||    
T  34801743 accacaaaacaagaatgcaataggattcaaaaaacttactttttttgtgtgattgaaattggcttggaatggcttcaaattgctcaaaatcgcacctagg 34801644  T
Q  171 aaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    | ||  ||||||||||||||||||||||| |||||||||||||| |||||| |||||||||    
T  34801643 agaataaaaaacgtaacaatggagttttgaaaactcctatgtcttttctatacttataaca 34801583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 71 - 231
Target Start/End: Original strand, 29068099 - 29068259
Alignment:
Q  71 aaccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagg 170  Q
    |||| ||||||| |||||||||||| || ||||||||||||| |||||||||||||||||||||||||||| |||||||  ||||||| |||||||| ||    
T  29068099 aaccgcaaaacaacaatgcaatagaattaaaaaaacttacttgtttttgtgattgaaattggcttgaaatggcttgaaagagctcaaaatcgcaccttgg 29068198  T
Q  171 aaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    | | | |||||||||||||||||||||| ||||||||||||| | || | |||||||||||    
T  29068199 agatcaaaaaacgtaacaatggagttttagaaactcctatgtttgttttgttcttataaca 29068259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 71 - 231
Target Start/End: Original strand, 29083346 - 29083506
Alignment:
Q  71 aaccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagg 170  Q
    |||| ||||||| |||||||||||| || ||||||||||||| |||||||||||||||||||||||||||| |||||||  ||||||| |||||||| ||    
T  29083346 aaccgcaaaacaacaatgcaatagaattaaaaaaacttacttgtttttgtgattgaaattggcttgaaatggcttgaaagagctcaaaatcgcaccttgg 29083445  T
Q  171 aaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    | | | |||||||||||||||||||||| ||||||||||||| | || | |||||||||||    
T  29083446 agatcaaaaaacgtaacaatggagttttagaaactcctatgtttgttttgttcttataaca 29083506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 76 - 231
Target Start/End: Complemental strand, 13616475 - 13616320
Alignment:
Q  76 caaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaac 175  Q
    ||||||| |||||||||||  || ||||||||||||| ||||||||||||||||||||||| |||| ||| |||||| || || ||||||| |||| ||     
T  13616475 caaaacaacaatgcaataggatttaaaaaacttacttgtttttgtgattgaaattggcttggaatggcttcaaattgttcgaaatcgcaccaaggataat 13616376  T
Q  176 caaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     ||||||| |||||||||||||||||||||||||||||| |||| |||||||||||    
T  13616375 aaaaaacgcaacaatggagttttggaaactcctatgtctgttctgttcttataaca 13616320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 2 - 185
Target Start/End: Complemental strand, 32026270 - 32026087
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatataatcgaaattcaacnnnnnnnnnnnnnnnntttaaccacaaaacagcaatgcaatagagttcaa 101  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||                ||  ||||||||||| |||| ||||||  |||||    
T  32026270 tatcctaacatatcataaaatcaataaaacctatataatcgaaatttaacaaaaaaatacaaacaattcgaccacaaaacaacaattcaataggattcaa 32026171  T
Q  102 aaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgta 185  Q
    ||||||||||| ||||||||||||||||||||||| |||  |||||||||||||||| |||||||||||| || ||||||||||    
T  32026170 aaaacttacttgtttttgtgattgaaattggcttggaatagcttgaaattgctcaaaatcgcacctaggagaatcaaaaacgta 32026087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 72 - 211
Target Start/End: Complemental strand, 32691423 - 32691284
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || |||| ||||||  |||||||||||||||| ||||||||||| ||||||||||| |||||||| ||||  |||||| |||||||| |||    
T  32691423 accacaaagcaacaatacaataggattcaaaaaacttacttgtttttgtgattaaaattggcttgtaatgacttaaaatgactcaaaatcgcaccttgga 32691324  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatg 211  Q
     ||  ||||||| |||||||||||||||||||||||||||    
T  32691323 taattaaaaacgcaacaatggagttttggaaactcctatg 32691284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 72 - 230
Target Start/End: Original strand, 13404467 - 13404625
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| |||||||||||  |||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||| ||  ||| | ||||||| ||    
T  13404467 accacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgatttaaattggattggaatgacttggaatggcagaaaattgcacctaaga 13404566  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataac 230  Q
     ||  |||| || |||||||||||||||||||||| ||||| | |||||||||||||||    
T  13404567 gaatgaaaaccgcaacaatggagttttggaaactcttatgtatgttctattcttataac 13404625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 75 - 229
Target Start/End: Original strand, 14124556 - 14124710
Alignment:
Q  75 acaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaa 174  Q
    |||||||| ||||||||||   |||| || || ||||| ||||||||||||||||||||||| |||| |||||||| ||| ||| |||||||| ||| ||    
T  14124556 acaaaacaacaatgcaataagattcagaacacgtacttgtttttgtgattgaaattggcttggaatggcttgaaatggctgaaaatcgcaccttggagaa 14124655  T
Q  175 ccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataa 229  Q
      |||||||||||||| ||||||||||||||||||||||  |||| |||||||||    
T  14124656 taaaaaacgtaacaatagagttttggaaactcctatgtcagttctgttcttataa 14124710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 72 - 211
Target Start/End: Original strand, 27641553 - 27641692
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || |||||||||||  |||||||||||||||| ||||||||||| ||||||||||  |||| ||| ||||  |||||| ||||||||   |    
T  27641553 accacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaaatcgcaccttcaa 27641652  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatg 211  Q
    |||  ||||||| ||||||||||||| |||||||||||||    
T  27641653 aaattaaaaacgcaacaatggagtttcggaaactcctatg 27641692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 97 - 211
Target Start/End: Original strand, 11693887 - 11694001
Alignment:
Q  97 ttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagtt 196  Q
    |||||||||||||||| ||||||||||| ||||||||||  |||| ||| ||||  |||||| ||||||||   ||||  ||||||| ||||||||||||    
T  11693887 ttcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaaatcgcaccttcaaaaattaaaaacgcaacaatggagtt 11693986  T
Q  197 ttggaaactcctatg 211  Q
    |||||||||||||||    
T  11693987 ttggaaactcctatg 11694001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 127 - 237
Target Start/End: Original strand, 17126862 - 17126973
Alignment:
Q  127 aattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattctta 226  Q
    |||||||||||||||||||    ||| | ||| |||||||||  ||| ||||||||| ||| |||||||||||||||||||||||||| |||| ||||||    
T  17126862 aattggcttgaaatgacttatgcttggtgaaaatcgcacctaataaatccaaaaacgcaacgatggagttttggaaactcctatgtctgttctgttctta 17126961  T
Q  227 t-aacagatcaa 237  Q
    | ||||||||||    
T  17126962 taaacagatcaa 17126973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 97 - 211
Target Start/End: Original strand, 6206920 - 6207034
Alignment:
Q  97 ttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagtt 196  Q
    |||||||||||||||| ||||||||||| ||||||||||  |||| ||| ||||  |||||| ||||||||   ||||  ||||||| | ||||| ||||    
T  6206920 ttcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaaatcgcaccttaaaaaattaaaaacgcatcaatgaagtt 6207019  T
Q  197 ttggaaactcctatg 211  Q
    |||||||||||||||    
T  6207020 ttggaaactcctatg 6207034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 34801822 - 34801777
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatataatcgaaatt 47  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  34801822 tatcctaacatatcataaaatcaataaaacctatataatcgaaatt 34801777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 74 - 211
Target Start/End: Original strand, 12398521 - 12398658
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||| |||||  ||||||  ||||||||||||||||  ||||||| |||||||||||||  |||| |||    ||  | || |||||||||| | ||    
T  12398521 cacaaaatagcaacacaataggattcaaaaaacttacttgattttgtgcttgaaattggctttgaatggcttatggtttgtaaatttcgcacctatggaa 12398620  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatg 211  Q
     | | ||||||||||||||||||||| |||||||||||    
T  12398621 gcaataaacgtaacaatggagttttgaaaactcctatg 12398658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 14124486 - 14124527
Alignment:
Q  6 ctaacatattataaaatcaataaaacctatataatcgaaatt 47  Q
    |||||| || ||||||||||||||||||||||||||||||||    
T  14124486 ctaacaaatcataaaatcaataaaacctatataatcgaaatt 14124527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 29068027 - 29068072
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatataatcgaaatt 47  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||    
T  29068027 tatcctaacatatcataaaattaataaaatctatataatcgaaatt 29068072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 29083273 - 29083318
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatataatcgaaatt 47  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||    
T  29083273 tatcctaacatatcataaaattaataaaatctatataatcgaaatt 29083318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 29109616 - 29109661
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatataatcgaaatt 47  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||    
T  29109616 tatcctaacatatcataaaattaataaaatctatataatcgaaatt 29109661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 215
Target Start/End: Complemental strand, 30763543 - 30763412
Alignment:
Q  84 caatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacg 183  Q
    |||||||||||  ||||||| ||||||||  ||||||| ||| |||||||||| |||||||| |  ||| | ||| | |||| || |||  |||||| ||    
T  30763543 caatgcaataggattcaaaacacttacttgattttgtgcttgtaattggcttggaatgacttaagcttggtgaaaattgcacataagaatcccaaaaccg 30763444  T
Q  184 taacaatggagttttggaaactcctatgtcta 215  Q
     |||||||||| || | ||| |||||||||||    
T  30763443 caacaatggagattcgaaaattcctatgtcta 30763412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 44
Target Start/End: Complemental strand, 35019885 - 35019857
Alignment:
Q  16 ataaaatcaataaaacctatataatcgaa 44  Q
    |||||||||||||||||||||||||||||    
T  35019885 ataaaatcaataaaacctatataatcgaa 35019857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 6e-47; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 49925095 - 49924936
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| |||||||||||  |||||||| ||||||| ||||||||||||||||||||||| |||||||| |||||||||||| ||||||| ||||    
T  49925095 accacaaaacaacaatgcaataggattcaaaaatcttacttgtttttgtgattgaaattggcttggaatgacttcaaattgctcaaaatcgcaccaagga 49924996  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     ||  ||||||| |||||||||||||||||||||||||||||| || | |||||||||||    
T  49924995 gaataaaaaacgcaacaatggagttttggaaactcctatgtctgttttgttcttataaca 49924936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 14172326 - 14172167
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| |||||||||||  |||||||||||||| | ||||||||||||||||||||||| ||||  ||||||||||| ||| ||||||||||||    
T  14172326 accacaaaacaacaatgcaataggattcaaaaaacttacctgtttttgtgattgaaattggcttggaatggtttgaaattgctgaaaatcgcacctagga 14172227  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     | | ||||||||||||||  |||||||||||||||||||||| |||| |||||||||||    
T  14172226 gatcaaaaaacgtaacaataaagttttggaaactcctatgtctgttctgttcttataaca 14172167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 72 - 231
Target Start/End: Original strand, 51271425 - 51271584
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| |||||||||||  |||| ||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||| ||||| | ||||    
T  51271425 accacaaaacaacaatgcaataggattcataaaacttacttgtttttgtgattgaaattggcttggaatgacttcaaattgctcaaaatcgcagcaagga 51271524  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     ||  ||||||| ||||||| |||||||||||||||||||||| |||| |||||||||||    
T  51271525 gaataaaaaacgcaacaatgaagttttggaaactcctatgtctgttctgttcttataaca 51271584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 77 - 231
Target Start/End: Original strand, 44598745 - 44598899
Alignment:
Q  77 aaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaacc 176  Q
    |||||| |||||||||||  || ||||||||||||| ||||||| ||||||||||||||| ||||||||||||| ||||||| |||||||| ||| | |     
T  44598745 aaaacaacaatgcaataggattaaaaaaacttacttgtttttgttattgaaattggcttggaatgacttgaaatagctcaaaatcgcaccttggagatca 44598844  T
Q  177 aaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    |||||||||||||||||||||| ||||||||||||||| |||| |||||||||||    
T  44598845 aaaaacgtaacaatggagtttttgaaactcctatgtctgttctgttcttataaca 44598899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 71 - 231
Target Start/End: Complemental strand, 27485272 - 27485113
Alignment:
Q  71 aaccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagg 170  Q
    |||| ||||||| |||||||||||  || |||||| |||||| ||||||||||||||||||||||| |||| |||||||| ||||||| |||||| | ||    
T  27485272 aaccgcaaaacaacaatgcaataggattaaaaaaa-ttacttgtttttgtgattgaaattggcttggaatggcttgaaatagctcaaaatcgcacattgg 27485174  T
Q  171 aaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    | | | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27485173 agatcaaaaaacgtaacaatggagttttggaaactcctatgtctgttctattcttataaca 27485113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 72 - 231
Target Start/End: Original strand, 36911530 - 36911690
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| ||||||||||   |||||||||||||| | |||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||    
T  36911530 accacaaaacaacaatgcaataagattcaaaaaacttacctgtttttgtgattgaaattggcttgaaatggcttgaaattgctgaaaatcgcacctagga 36911629  T
Q  172 aaac-caaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     | |  ||||| |||||||||||||||||||||||| |||||||||| | |||||||||||    
T  36911630 gatcaaaaaaatgtaacaatggagttttggaaactcatatgtctattatgttcttataaca 36911690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 74 - 231
Target Start/End: Original strand, 49398307 - 49398463
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||||| ||||||||||   |||||||||||||||| ||||||||||||||||||| ||| |||||||| |||||||||||| | |||||||||| |    
T  49398307 cacaaaacaacaatgcaataagattcaaaaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgctcaaaatagcacctaggaga 49398406  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    |  |||||||||||||| ||||||||||||||||||||||| || | |||||||||||    
T  49398407 ataaaaaacgtaacaat-gagttttggaaactcctatgtctgttatgttcttataaca 49398463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 72 - 204
Target Start/End: Original strand, 41803868 - 41804000
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| | ||||||||||    
T  41803868 accacaaaacaacaatgcaataggattcaaaaaacttacttatttttgtgattgaaattggcttggaatgacttcaaattgctcaaaattgcacctagga 41803967  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaac 204  Q
     ||  ||||| ||||||||||||||||| ||||    
T  41803968 gaataaaaaatgtaacaatggagttttgaaaac 41804000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 42570361 - 42570201
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| ||||||||||   |||||||||||||||| |||||||||||||||||| |||  |||||||| |||||||||||| ||||||||||||    
T  42570361 accacaaaacaacaatgcaataagattcaaaaaacttacttgtttttgtgattgaaattgactttgaatgacttcaaattgctcaaaatcgcacctagga 42570262  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcc-tatgtctattctattcttataaca 231  Q
     ||  |||||| ||||||||||||||||||||||||  |||||| |||| | |||||||||    
T  42570261 gaataaaaaacataacaatggagttttggaaactccaaatgtctgttctgtacttataaca 42570201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 71 - 231
Target Start/End: Complemental strand, 44336489 - 44336329
Alignment:
Q  71 aaccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagg 170  Q
    |||| ||||||| |||||||||||  || ||||||||||||| ||||||||||||||||||||||| |||| ||||||||  |||||| | |||| | ||    
T  44336489 aaccgcaaaacaacaatgcaataggattaaaaaaacttacttgtttttgtgattgaaattggcttggaatggcttgaaataactcaaaattgcacattgg 44336390  T
Q  171 aaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    | | | |||||||||||||| ||||||||||||||||||||||| |||| |||||||||||    
T  44336389 agatcaaaaaacgtaacaattgagttttggaaactcctatgtctgttctgttcttataaca 44336329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 26633766 - 26633606
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| |||||||||||  || |||||||||| || ||||||||||||||||||||||| |||||||| |||||||||||| ||||| ||||||    
T  26633766 accacaaaacaacaatgcaataggattaaaaaaacttagttgtttttgtgattgaaattggcttggaatgacttcaaattgctcaaaatcgcatctagga 26633667  T
Q  172 -aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     ||   |||||||||||| |||||||||||||||||| |||| | |||| | |||||||||    
T  26633666 gaataaaaaaacgtaacattggagttttggaaactccaatgtatgttctgtacttataaca 26633606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 13148889 - 13149029
Alignment:
Q  73 ccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaa 172  Q
    |||||||||| | |||||||||  || ||||||||||||| |||||||||||||||||||| || |||||||||      |||||| ||| ||||||||     
T  13148889 ccacaaaacaacgatgcaataggattaaaaaaacttacttgtttttgtgattgaaattggcctggaatgacttg------ctcaaaatcgtacctaggag 13148982  T
Q  173 aaccaaaaacgtaacaatggagttttggaaactcctatgtctattct 219  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||    
T  13148983 aaccaaaaacataacaatggagttttggaaactcctatgtctgttct 13149029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 71 - 210
Target Start/End: Complemental strand, 29760743 - 29760604
Alignment:
Q  71 aaccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagg 170  Q
    |||| ||||||| |||||||||||  || ||||||||||||| ||||||||||||||||||||||  |||||||||||||  |||||| |||||||| ||    
T  29760743 aaccgcaaaacaacaatgcaataggattaaaaaaacttacttctttttgtgattgaaattggcttagaatgacttgaaataactcaaaatcgcaccttgg 29760644  T
Q  171 aaaaccaaaaacgtaacaatggagttttggaaactcctat 210  Q
    | |   ||||||||||||||||||||||| ||||||||||    
T  29760643 agataaaaaaacgtaacaatggagttttgaaaactcctat 29760604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 72 - 212
Target Start/End: Complemental strand, 13634104 - 13633964
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || |||||||||||  |||||||||||||||| ||||||||||||||||||||||| |||| ||| ||||   ||||| ||||| || |||    
T  13634104 accacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttgtaatgtcttcaaatgattcaaaatcgcaacttgga 13634005  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgt 212  Q
     |  |||||||| ||||||||||||||||||||||||||||    
T  13634004 tactcaaaaacgcaacaatggagttttggaaactcctatgt 13633964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 35524967 - 35524818
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||||||| |||||||||||          |||||||||||| |||||||| |||    
T  35524967 accacaaaacagcaatgcaataggattcaaaaaacttaattatttttgtgatttaaattggcttg----------aaattgctcaaaatcgcaccttgga 35524878  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     | | |||||||||||||||||||||| |||||||  |||||| |||| |||||||||||    
T  35524877 gatcaaaaaacgtaacaatggagtttttgaaactctcatgtctgttctgttcttataaca 35524818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 108 - 213
Target Start/End: Original strand, 29437890 - 29437995
Alignment:
Q  108 tacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagttttggaaactcc 207  Q
    ||||| ||||||||||||||||||| ||| |||||||| |||||||||||| ||||||| |||| ||  ||||||| |||||||||||||||||||||||    
T  29437890 tacttgtttttgtgattgaaattggtttggaatgacttcaaattgctcaaaatcgcaccaaggagaataaaaaacgcaacaatggagttttggaaactcc 29437989  T
Q  208 tatgtc 213  Q
    ||||||    
T  29437990 tatgtc 29437995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 72 - 211
Target Start/End: Complemental strand, 19162130 - 19161991
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| ||  ||||||||||  |||||||||||||||| ||||||||||||||||||||||| |||| ||| ||||   ||||| |||||||| |||    
T  19162130 accacaaagcaaaaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatggcttcaaatgattcaaaatcgcaccttgga 19162031  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatg 211  Q
     ||  ||||| | |||||||||||||||||||||||||||    
T  19162030 taataaaaaatgcaacaatggagttttggaaactcctatg 19161991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 72 - 211
Target Start/End: Original strand, 49428996 - 49429135
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || |||||||| ||   ||||||||||||||| ||||||||||||||||||||||  |||||||| ||||  || ||| |||||||| |||    
T  49428996 accacaaagcaacaatgcaaaagtaatcaaaaaacttacttgtttttgtgattgaaattggcttagaatgacttcaaatgacttaaaatcgcaccttgga 49429095  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatg 211  Q
     ||  ||||||| |||||||||||||||||||||||||||    
T  49429096 taataaaaaacgcaacaatggagttttggaaactcctatg 49429135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 72 - 230
Target Start/End: Original strand, 6437374 - 6437532
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| |||||||||||  ||||||||| |||||| |||||||||||||||||| |||| |||| |||| |||  |  ||| ||||||||| ||    
T  6437374 accacaaaacaacaatgcaataggattcaaaaaatttacttgtttttgtgattgaaattgacttgtaatggcttggaatgacagaaaatcgcacctaaga 6437473  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataac 230  Q
     ||  |||| || |||||||||||||| |||||||||||| || |||| ||||||||||    
T  6437474 gaatgaaaaccgcaacaatggagttttagaaactcctatgcctgttctgttcttataac 6437532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 74 - 212
Target Start/End: Original strand, 23344242 - 23344380
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||| |||||||||||||| ||||||||||||||||  ||||||| |||||||||||||| |||| |||    ||  | ||||||||||||| | ||    
T  23344242 cacaaaatagcaatgcaatagaattcaaaaaacttacttgattttgtgcttgaaattggcttggaatggcttatgctttgtgaaattcgcacctatggaa 23344341  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatgt 212  Q
     | ||||||||||||||| ||||||||||||||||||||    
T  23344342 gcaaaaaacgtaacaatgaagttttggaaactcctatgt 23344380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 74 - 212
Target Start/End: Complemental strand, 38043687 - 38043549
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||| ||||| |||||||  ||||||||||||||||  ||||||| |||||||||||||| ||||||||    ||  | ||||||||||||| | ||    
T  38043687 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgtttgaaattggcttggaatgacttatggtttgtgaaattcgcacctatggaa 38043588  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatgt 212  Q
     | ||||||||||||||||||||||||||||||||||||    
T  38043587 gcaaaaaacgtaacaatggagttttggaaactcctatgt 38043549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 74 - 211
Target Start/End: Complemental strand, 39855727 - 39855589
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttactt-atttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaa 172  Q
    ||||||| ||||| |||||||  |||||||||||||||| ||||||||| |||||||||||||| ||||||||    ||  | ||||||||||||| | |    
T  39855727 cacaaaatagcaacgcaataggattcaaaaaacttacttgatttttgtgcttgaaattggcttggaatgacttatggtttgtgaaattcgcacctatgga 39855628  T
Q  173 aaccaaaaacgtaacaatggagttttggaaactcctatg 211  Q
    | | |||||||||||||||||||||||||||||||||||    
T  39855627 agcaaaaaacgtaacaatggagttttggaaactcctatg 39855589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 71 - 236
Target Start/End: Complemental strand, 24362525 - 24362363
Alignment:
Q  71 aaccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagg 170  Q
    |||||||||||| |||||||||||  ||||||||||||     |||||| |||||||||| | ||| |||| |||||||| ||| ||| |||||| ||||    
T  24362525 aaccacaaaacaacaatgcaataggattcaaaaaacttg----tttttgcgattgaaattagattggaatggcttgaaatggctgaaaatcgcacatagg 24362430  T
Q  171 aaaaccaaaaacgtaacaatggagttttggaaactcctatgtct-attctattcttataacagatca 236  Q
    | ||||||| ||||||||  ||||||||||||||||||||||||  || | ||||||||||||||||    
T  24362429 agaaccaaacacgtaacagaggagttttggaaactcctatgtctgttttttttcttataacagatca 24362363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 97 - 212
Target Start/End: Original strand, 48228170 - 48228286
Alignment:
Q  97 ttcaaaaaacttacttatttt-tgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagt 195  Q
    |||||||||||||||| |||| ||||||||||||||||||| |||| ||| ||||  |||||| |||||||| ||| ||  ||||||| |||||||||||    
T  48228170 ttcaaaaaacttacttgttttttgtgattgaaattggcttggaatgccttcaaatgactcaaaatcgcaccttggataataaaaaacgcaacaatggagt 48228269  T
Q  196 tttggaaactcctatgt 212  Q
    |||||||||||||||||    
T  48228270 tttggaaactcctatgt 48228286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 77 - 211
Target Start/End: Complemental strand, 33285924 - 33285790
Alignment:
Q  77 aaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaa-attgctcaaattcgcacctaggaaaac 175  Q
    |||| |||||||||||||  ||||||||||||||||  ||||||| |||||||||||||| |||| |||    |||| | ||||||||||||| | || |    
T  33285924 aaaatagcaatgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttggaatggcttatgcattg-tgaaattcgcacctatggaagc 33285826  T
Q  176 caaaaacgtaacaatggagttttggaaactcctatg 211  Q
     |||||||||||||||||||||||||||||||||||    
T  33285825 aaaaaacgtaacaatggagttttggaaactcctatg 33285790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 74 - 212
Target Start/End: Original strand, 14440872 - 14441009
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||| | |||||||||||  ||||||||||||||||  ||||||| |||||||||||||| |||| |||    ||| | ||||||||||||  ||||    
T  14440872 cacaaaataacaatgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttggaatggcttatgcttg-tgaaattcgcacctgagaaa 14440970  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatgt 212  Q
     |||||||| ||||| |||||||||||||||||||||||    
T  14440971 tccaaaaacataacagtggagttttggaaactcctatgt 14441009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 26497804 - 26497882
Alignment:
Q  155 caaattcgcacctaggaaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataacaga 233  Q
    |||| |||||||||||| |||||||||||||||| |||||||||||||||| |||||| | |||| |||||||||||||    
T  26497804 caaaatcgcacctaggagaaccaaaaacgtaacactggagttttggaaacttctatgtatgttctgttcttataacaga 26497882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 72 - 143
Target Start/End: Original strand, 18974965 - 18975036
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgac 143  Q
    ||||||||||| |||||||||||  |||||||||||||||| |||||||||| |||||||||||| ||||||    
T  18974965 accacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgatcgaaattggcttggaatgac 18975036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 74 - 233
Target Start/End: Complemental strand, 49260164 - 49260007
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||| ||||||||||||   ||||||||||||||||  ||||||| |||||||||||||| |||| ||     ||||| |||  ||||| |  ||||    
T  49260164 cacaaaatagcaatgcaatatgattcaaaaaacttacttgattttgtgcttgaaattggcttggaatggctgatgtttgctgaaaa-cgcacttgagaaa 49260066  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataacaga 233  Q
     ||||||||||||||||||||||||||||||| ||||| || |||| ||| |||||||||    
T  49260065 tccaaaaacgtaacaatggagttttggaaactgctatg-ctgttctgttcatataacaga 49260007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 115 - 233
Target Start/End: Complemental strand, 12789904 - 12789787
Alignment:
Q  115 ttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagttttggaaactcctatgtct 214  Q
    ||||||| |||||||||||||| |||| |||    ||  | ||||||||||||| |||| | |||||||||||||||||||||||||||||||||| |||    
T  12789904 ttttgtgcttgaaattggcttggaatggcttatgctttgtgaaattcgcacctatgaaagcaaaaaacgtaacaatggagttttggaaactcctat-tct 12789806  T
Q  215 attctattcttataacaga 233  Q
     |||| ||| |||||||||    
T  12789805 gttctgttcatataacaga 12789787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 46142005 - 46141941
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttg 136  Q
    ||||||||||| |||||||||||  ||||||||||| |||| |||||||||||||||||||||||    
T  46142005 accacaaaacaacaatgcaataggattcaaaaaactcacttgtttttgtgattgaaattggcttg 46141941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 13974489 - 13974534
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatataatcgaaatt 47  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  13974489 tatcctaacatatcataaaatcaataaaacctatataatcgaaatt 13974534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 41803797 - 41803842
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatataatcgaaatt 47  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  41803797 tatcctaacatatcataaaatcaataaaacctatataatcgaaatt 41803842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 13285196 - 13285253
Alignment:
Q  87 tgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgact 144  Q
    ||||||||| ||||||| ||||||||  ||||||||||||||||| ||||||||||||    
T  13285196 tgcaatagaattcaaaacacttacttgattttgtgattgaaattgccttgaaatgact 13285253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 212
Target Start/End: Complemental strand, 40531935 - 40531797
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||| ||||||||||||   ||||||||||||||||  |||| || ||||| ||||| |  |||||| |    ||  | ||||||||||||| | ||    
T  40531935 cacaaaatagcaatgcaatatgattcaaaaaacttacttgattttatgcttgaatttggcgtagaatgacgtatgctttgtgaaattcgcacctatggaa 40531836  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatgt 212  Q
     | ||| |||||||||| |||||||||||||||||||||    
T  40531835 gcaaaacacgtaacaatagagttttggaaactcctatgt 40531797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 16530677 - 16530628
Alignment:
Q  185 aacaatggagttttggaaactcctatgtctattctattcttataacagat 234  Q
    |||||||||||||||||||||||||||||| |||  || |||||||||||    
T  16530677 aacaatggagttttggaaactcctatgtctgttccgtttttataacagat 16530628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 39063336 - 39063288
Alignment:
Q  185 aacaatggagttttggaaactcctatgtctattctattcttataacaga 233  Q
    ||||||| |||||||||||||| ||||||| |||| |||||||||||||    
T  39063336 aacaatgaagttttggaaactcttatgtctgttctgttcttataacaga 39063288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 229
Target Start/End: Original strand, 13287484 - 13287543
Alignment:
Q  170 gaaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataa 229  Q
    |||| ||||||||| ||||||||| ||||| |||||||||||||| |||| ||| |||||    
T  13287484 gaaatccaaaaacgcaacaatggaattttgaaaactcctatgtctgttctgttcatataa 13287543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 14172384 - 14172349
Alignment:
Q  16 ataaaatcaataaaacctatataatcgaaattcaac 51  Q
    |||||||||||||||||||||||||||||||| |||    
T  14172384 ataaaatcaataaaacctatataatcgaaatttaac 14172349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 47
Target Start/End: Complemental strand, 46142063 - 46142032
Alignment:
Q  16 ataaaatcaataaaacctatataatcgaaatt 47  Q
    ||||||||||||||||||||||||||||||||    
T  46142063 ataaaatcaataaaacctatataatcgaaatt 46142032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 19261035 - 19260969
Alignment:
Q  160 tcgcacctaggaaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattctta 226  Q
    ||||||||| | ||| ||||| || ||||||||||||||||||| || ||||||| |||| ||||||    
T  19261035 tcgcacctatggaaatcaaaaccgcaacaatggagttttggaaattcatatgtctgttctgttctta 19260969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 14771249 - 14771204
Alignment:
Q  185 aacaatggagttttggaaactcctatg-tctattctattcttataa 229  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||||    
T  14771249 aacaatggagttttggaaactcctaggttctgttctattcttataa 14771204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 18974879 - 18974915
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatata 38  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  18974879 tatcctagcatatcataaaatcaataaaacctatata 18974915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 44
Target Start/End: Complemental strand, 42570409 - 42570381
Alignment:
Q  16 ataaaatcaataaaacctatataatcgaa 44  Q
    |||||||||||||||||||||||||||||    
T  42570409 ataaaatcaataaaacctatataatcgaa 42570381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 6e-44; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 71 - 229
Target Start/End: Original strand, 41276719 - 41276877
Alignment:
Q  71 aaccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagg 170  Q
    |||| ||||||| |||||||||||  || ||||||||||||| ||||||||||||||||||||||| |||| |||||||| ||||||| ||| |||| ||    
T  41276719 aaccgcaaaacaacaatgcaataggattaaaaaaacttacttgtttttgtgattgaaattggcttggaatggcttgaaatagctcaaaatcgtaccttgg 41276818  T
Q  171 aaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataa 229  Q
    | | | |||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  41276819 agatcaaaaaacgtaacaatggagttttggaaactcctatgtctgttctgttcttataa 41276877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 71 - 231
Target Start/End: Original strand, 26455509 - 26455669
Alignment:
Q  71 aaccacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagg 170  Q
    |||| ||||||| |||||||||||  || ||||||||||||| |||||||||||||||||||||   ||||||||||||| ||||||| |||||||| ||    
T  26455509 aaccgcaaaacaacaatgcaataggattaaaaaaacttacttgtttttgtgattgaaattggctgagaatgacttgaaatagctcaaaatcgcaccttgg 26455608  T
Q  171 aaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    | | | ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  26455609 agatcaaaaaatgtaacaatggagttttggaaactcctatgcctattctgttcttataaca 26455669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 72 - 231
Target Start/End: Original strand, 22550699 - 22550858
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| |||||||||||  |||| ||||||||||| ||||||||||||||||||||||| |||| ||| ||||||||||||  |||| | ||||    
T  22550699 accacaaaacaacaatgcaataggattcagaaaacttacttgtttttgtgattgaaattggcttggaatggcttcaaattgctcaaaaccgcagcaagga 22550798  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     || |||||||| |||||||||||||||||||||||||||||  |||| |||||||||||    
T  22550799 taatcaaaaacgcaacaatggagttttggaaactcctatgtccgttctgttcttataaca 22550858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 72 - 231
Target Start/End: Original strand, 28168437 - 28168596
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||| |||||| |||| |||||| | ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||    
T  28168437 accaaaaaacaacaattcaatagggctcaaaaaacttacttgtttttgtgattgaaattggcttggaatgacttgaaattgctcaaaatcgcacccagga 28168536  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     ||  ||||||| ||||||| ||||||| |||||| ||||||| |||| |||||||||||    
T  28168537 gaataaaaaacgcaacaatgaagttttgaaaactcatatgtctgttctgttcttataaca 28168596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 76 - 231
Target Start/End: Original strand, 44052064 - 44052219
Alignment:
Q  76 caaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaac 175  Q
    ||||||| |||||||||||  || ||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||| | |||||| ||| | |    
T  44052064 caaaacaacaatgcaataggattaaaaaaacttacttgtttttgtgattgaaattggcttgaaatggcttgaaatagctcaaaatggcaccttggagatc 44052163  T
Q  176 caaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     |||||||||||||| ||||||||||||||||||||||  || |||||||||||||    
T  44052164 aaaaaacgtaacaatagagttttggaaactcctatgtcagttatattcttataaca 44052219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 2 - 210
Target Start/End: Complemental strand, 41855672 - 41855464
Alignment:
Q  2 tatcctaacatattataaaatcaataaaacctatataatcgaaattcaacnnnnnnnnnnnnnnnntttaaccacaaaacagcaatgcaatagagttcaa 101  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||| |||                ||| ||||||||||| ||||||||| |  |||||    
T  41855672 tatcctaacatatcataaaatcaataaaacctatataattgaaatttaacaaaaaaaaaaaaaaaatttgaccacaaaacaacaatgcaatgggattcaa 41855573  T
Q  102 aaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagttttgga 201  Q
    ||||||||||| ||||||||||||||||||| ||| |||||||| |||||||||||| ||||||| |||| ||  ||||||| ||||||||||||||| |    
T  41855572 aaaacttacttgtttttgtgattgaaattggtttggaatgacttcaaattgctcaaaatcgcaccaaggagaataaaaaacgcaacaatggagttttgaa 41855473  T
Q  202 aactcctat 210  Q
    |||||||||    
T  41855472 aactcctat 41855464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 72 - 231
Target Start/End: Original strand, 42605069 - 42605228
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| || |||||||   |||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||| ||||||| ||||    
T  42605069 accacaaaacaacagtgcaatatgattcaaaaaacttacttatttctgtgattgaaattggcttggaatgacttcaaattgctcaaaatcgcaccaagga 42605168  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     ||  ||||||| ||||||||||||||||||||| |||| ||| || | |||||||||||    
T  42605169 gaataaaaaacgcaacaatggagttttggaaactactatatctgttatgttcttataaca 42605228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 72 - 210
Target Start/End: Original strand, 40703995 - 40704132
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    ||||||||||| ||||||||||   ||||||| |||||||| ||||||||||||||||||||||| |||||||| |||||||||||| ||||||  || |    
T  40703995 accacaaaacaacaatgcaatatgattcaaaa-acttacttgtttttgtgattgaaattggcttggaatgacttcaaattgctcaaaatcgcacaaagaa 40704093  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctat 210  Q
     ||| ||||||| ||||||||||||||||||||||||||    
T  40704094 gaacaaaaaacgcaacaatggagttttggaaactcctat 40704132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 72 - 212
Target Start/End: Complemental strand, 41016652 - 41016512
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || |||||||||||  ||||||||||||| || ||||||||||||||||||||||| |||| ||| ||||  |||||| |||||||| |||    
T  41016652 accacaaagcaacaatgcaataggattcaaaaaacttaattgtttttgtgattgaaattggcttggaatggcttcaaatgactcaaaatcgcaccttgga 41016553  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgt 212  Q
     ||  ||||||| ||||||||||||||||||||||||||||    
T  41016552 taataaaaaacgcaacaatggagttttggaaactcctatgt 41016512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 72 - 211
Target Start/End: Original strand, 45066196 - 45066335
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || |||||||||||  |||||||||||||||| ||||||||||||||||||||||| |||| ||| ||||  |||||| |||||||| |||    
T  45066196 accacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttgtaatggcttcaaatgactcaaaatcgcaccttgga 45066295  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatg 211  Q
     ||   |||||  |||||||||||||||||||||||||||    
T  45066296 taattcaaaacacaacaatggagttttggaaactcctatg 45066335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 72 - 211
Target Start/End: Complemental strand, 484054 - 483915
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || |||||||||||  |||||||||||||||| ||||||||||| ||||||||||  |||| ||| ||||  |||||| ||||||||   |    
T  484054 accacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaaatcgcaccttcaa 483955  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatg 211  Q
    |||  ||||||| |||||||||||||||||||||||||||    
T  483954 aaattaaaaacgcaacaatggagttttggaaactcctatg 483915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 72 - 211
Target Start/End: Complemental strand, 15031121 - 15030983
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || |||||||||||  |||||||| ||||||| ||||||||||||||||||||||| |||| ||| ||||  |||||| |||||||| |||    
T  15031121 accacaaagcaacaatgcaataggattcaaaaa-cttacttgtttttgtgattgaaattggcttgtaatggcttcaaatgactcaaaatcgcaccttgga 15031023  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatg 211  Q
     ||  ||||||| ||||||||| |||||||||||||||||    
T  15031022 taattaaaaacgcaacaatggaattttggaaactcctatg 15030983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 74 - 211
Target Start/End: Original strand, 26488303 - 26488440
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||| ||||| |||||||  ||||||||||||||||  ||||||| |||||||| ||||| |||| |||    ||  | || |||||||||| | ||    
T  26488303 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattagcttggaatggcttatggtttgtgaatttcgcacctatggaa 26488402  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatg 211  Q
     | |||||||||||||||||||||||||||||||||||    
T  26488403 gcaaaaaacgtaacaatggagttttggaaactcctatg 26488440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 74 - 211
Target Start/End: Complemental strand, 38032447 - 38032310
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||| |||||||||||||  ||||||||||||||||  ||||||| |||||||||||||| |||| ||     ||||| |||  ||||| |  ||||    
T  38032447 cacaaaatagcaatgcaataggattcaaaaaacttacttgattttgtgcttgaaattggcttggaatggctgatgtttgctgaaaaacgcacatgagaaa 38032348  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatg 211  Q
     |||||||| ||||||| ||||||||||||||||||||    
T  38032347 tccaaaaacataacaattgagttttggaaactcctatg 38032310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 72 - 141
Target Start/End: Original strand, 38872776 - 38872845
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatg 141  Q
    ||||||||||| |||||||||||  |||||||||||||||| ||||||||||||||||||||||| ||||    
T  38872776 accacaaaacaacaatgcaataggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatg 38872845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 141
Target Start/End: Complemental strand, 18438864 - 18438793
Alignment:
Q  71 aaccacaaaacagcaatgcaatagag-ttcaaaaaacttacttatttttgtgattgaaattggcttgaaatg 141  Q
    |||||||||||| ||||||||||| | |||||||||||||||| ||||||||||||||||||||||| ||||    
T  18438864 aaccacaaaacaacaatgcaatagggattcaaaaaacttacttgtttttgtgattgaaattggcttggaatg 18438793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 42604977 - 42605020
Alignment:
Q  1 ttatcctaacatattataaaatcaataaaacctatataatcgaa 44  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  42604977 ttatcctaacatatcataaaatcaataaaacctatataatcgaa 42605020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 74 - 146
Target Start/End: Complemental strand, 19241214 - 19241142
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttg 146  Q
    ||||||| ||||||||||||   ||||||||||||||||  ||||||| |||||||||||||| |||| ||||    
T  19241214 cacaaaatagcaatgcaatatgattcaaaaaacttacttgattttgtgtttgaaattggcttggaatggcttg 19241142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 74 - 146
Target Start/End: Complemental strand, 19314398 - 19314326
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttg 146  Q
    ||||||| ||||||||||||   ||||||||||||||||  ||||||| |||||||||||||| |||| ||||    
T  19314398 cacaaaatagcaatgcaatatgattcaaaaaacttacttgattttgtgtttgaaattggcttggaatggcttg 19314326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 145
Target Start/End: Original strand, 26488185 - 26488256
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgactt 145  Q
    ||||||| ||||| |||||||  ||||||||||||||||  ||||||| |||||||| ||||| ||||||||    
T  26488185 cacaaaatagcaacgcaataggattcaaaaaacttacttgattttgtgcttgaaattagcttggaatgactt 26488256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 22519478 - 22519536
Alignment:
Q  153 ctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagttttggaaactcctatg 211  Q
    |||||| |||||||| | ||||  ||||||| |||||||||||||||||||||||||||    
T  22519478 ctcaaaatcgcaccttgaaaaattaaaaacgcaacaatggagttttggaaactcctatg 22519536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 31170629 - 31170581
Alignment:
Q  97 ttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgactt 145  Q
    ||||||| ||||||||  ||||||| |||||||||||||| ||||||||    
T  31170629 ttcaaaacacttacttgattttgtgcttgaaattggcttggaatgactt 31170581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 44
Target Start/End: Original strand, 40703923 - 40703951
Alignment:
Q  16 ataaaatcaataaaacctatataatcgaa 44  Q
    |||||||||||||||||||||||||||||    
T  40703923 ataaaatcaataaaacctatataatcgaa 40703951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 79 - 231
Target Start/End: Original strand, 3425 - 3577
Alignment:
Q  79 aacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaa 178  Q
    |||| |||||||||||  |||| ||||||||||| ||||||||||||||||||||||| |||| ||| |||||||||||| ||||| | |||| ||  ||    
T  3425 aacaacaatgcaataggattcagaaaacttacttgtttttgtgattgaaattggcttggaatggctttaaattgctcaaaatcgcagcaaggagaataaa 3524  T
Q  179 aaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
    ||||| |||||||||||||||||||||||||||||| || |||||||||||||    
T  3525 aaacgcaacaatggagttttggaaactcctatgtctgttatattcttataaca 3577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 525 - 627
Alignment:
Q  109 acttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaaaccaaaaacgtaacaatggagttttggaaactcct 208  Q
    |||| ||||||||||||||||||||||| |||||||| ||||  |||||| |||||||| ||| ||  ||||||| ||||||||||||||||||||||||    
T  525 acttgtttttgtgattgaaattggcttggaatgacttcaaatgactcaaaatcgcaccttggataataaaaaacgcaacaatggagttttggaaactcct 624  T
Q  209 atg 211  Q
    |||    
T  625 atg 627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 10916 - 10758
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || ||||||||||   |||||||||||||||| |||||||||||||||||||||| |||||| || ||||  |||||| |||||||| |||    
T  10916 accacaaagcaacaatgcaatatgattcaaaaaacttacttgtttttgtgattgaaattggcttaaaatgaattcaaatgactcaaaatcgcaccttgga 10817  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataaca 231  Q
     ||  ||||||| ||||||| ||||||||||||||||||| ||||| | |||||||||||    
T  10816 taataaaaaacgcaacaatgaagttttggaaactcctatg-ctattatgttcttataaca 10758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 74 - 235
Target Start/End: Original strand, 2004 - 2165
Alignment:
Q  74 cacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctaggaaa 173  Q
    ||||||||| |||| ||||||| |||| ||||||||||| |||||||| ||||||||| |||| |||| |||    ||  | ||||||||||||  | ||    
T  2004 cacaaaacatcaatacaatagaattcacaaaacttacttgtttttgtgcttgaaattgacttggaatggcttatgctttgtgaaattcgcacctttggaa 2103  T
Q  174 accaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataacagatc 235  Q
     | ||||| | |||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  2104 gcaaaaaatgcaacaatggagttttggaaactcctatgtctgttctgttcttataacagatc 2165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 72 - 211
Target Start/End: Original strand, 39 - 178
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| ||  ||| ||||||  |||||||||||||||| ||||||||||| |||||| |||| |||| ||| ||||  |||||| |||||||| |||    
T  39 accacaaagcaataatacaataggattcaaaaaacttacttgtttttgtgattaaaattgacttgtaatggcttcaaatgactcaaaatcgcaccttgga 138  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatg 211  Q
     ||  ||||||| |||||||||||||||||||||||||||    
T  139 taattaaaaacgcaacaatggagttttggaaactcctatg 178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 72 - 211
Target Start/End: Complemental strand, 84818 - 84679
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || |||||||||||  |||||||||||||||| ||||||||||| ||||||||||  |||| ||| ||||  |||||| |||||||| | |    
T  84818 accacaaagcaacaatgcaataggattcaaaaaacttacttgtttttgtgattaaaattggcttctaatggcttcaaatgactcaaaatcgcaccttgaa 84719  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatg 211  Q
    |||  ||||| | |||||||||||||||||||||| ||||    
T  84718 aaattaaaaatgcaacaatggagttttggaaactcatatg 84679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 72 - 212
Target Start/End: Complemental strand, 5569 - 5429
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatgacttgaaattgctcaaattcgcacctagga 171  Q
    |||||||| || |||||||||||  || ||||||||||||| ||||| ||||||||||||||||| |||| ||| ||||  |||||| | ||| || |||    
T  5569 accacaaagcaacaatgcaataggattaaaaaaacttacttgtttttatgattgaaattggcttgtaatggcttcaaatgactcaaaattgcaacttgga 5470  T
Q  172 aaaccaaaaacgtaacaatggagttttggaaactcctatgt 212  Q
     |   ||||||| ||||||||||||||||||||||||||||    
T  5469 tactaaaaaacgcaacaatggagttttggaaactcctatgt 5429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 10246 - 10303
Alignment:
Q  176 caaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataacaga 233  Q
    ||||| || ||||||||||||||||||| |||||||||| || |||||||||||||||    
T  10246 caaaaccgcaacaatggagttttggaaattcctatgtctgttatattcttataacaga 10303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 141
Target Start/End: Complemental strand, 16630 - 16561
Alignment:
Q  72 accacaaaacagcaatgcaatagagttcaaaaaacttacttatttttgtgattgaaattggcttgaaatg 141  Q
    ||||||||||| |||||||||||  ||||||||| |||||| |||||||| ||||||||| |||| ||||    
T  16630 accacaaaacaacaatgcaataggattcaaaaaatttacttgtttttgtgcttgaaattgacttggaatg 16561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 16527 - 16483
Alignment:
Q  185 aacaatggagttttggaaactcctatgtctattctattcttataa 229  Q
    ||||||||||||||||||||||| |||||| |||| | |||||||    
T  16527 aacaatggagttttggaaactccaatgtctgttctgtacttataa 16483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 4035 - 3965
Alignment:
Q  160 tcgcacctaggaaaaccaaaaacgtaacaatggagttttggaaactcctatgtctattctattcttataac 230  Q
    ||||||||| || ||  |||| || ||||||| |||||||||||||||||||||| |||| ||||||||||    
T  4035 tcgcacctaagagaatgaaaaccgcaacaatgaagttttggaaactcctatgtctgttctgttcttataac 3965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 154368 - 154417
Alignment:
Q  185 aacaatggagttttggaaactcctatgt-ctattctattcttataacaga 233  Q
    ||||||||||||||||||| |||||||| || |||| |||||||||||||    
T  154368 aacaatggagttttggaaattcctatgtgctgttctgttcttataacaga 154417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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