View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0707_2D_low_30 (Length: 267)
Name: NF0707_2D_low_30
Description: NF0707_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0707_2D_low_30 |
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Alignment Details
Target: chr3 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 32725403 - 32725650
Alignment:
| Q |
1 |
ccacacccacctcttcaaccctatacccatcattaaaaagccctaacaacagcttcgcttgacaatgatttgcaaagctcaccggaactcccctaaaccc |
100 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32725403 |
ccacacccacctcttcaaccctatacccatcattaaaaagccctaacaacagctttgcttgacaatgatttgcaaagctcaccggaactcccctaaaccc |
32725502 |
T |
|
| Q |
101 |
tacctcacctaaccactccccccatgaccttctctcctcttcaccacccgttctatatatccggcccaacgagcctgcaattctaggcccaaaaaatacc |
200 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32725503 |
tacctcacctaaccactccccccatgaccttctctcctcttcaccacccgttctatatatccggcccaacgagcctgcaattctaggcccaaaaaatacc |
32725602 |
T |
|
| Q |
201 |
ctctccaccaaagtccgggcccggttctgcatcggaaaaccagcctcc |
248 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32725603 |
ctctccaccaaagtccgggcccggttctgcatcggaaaaccagcctcc |
32725650 |
T |
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