View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0707_2D_low_58 (Length: 201)
Name: NF0707_2D_low_58
Description: NF0707_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0707_2D_low_58 |
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Alignment Details
Target: chr4 (Bit Score: 179; Significance: 8e-97; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 179; E-Value: 8e-97
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 43985786 - 43985604
Alignment:
| Q |
1 |
gattgaagttggaactgtgccaccactgttggatcttttagctacggaggataaaaccactcaggagaatgcaatctctgctttactgaagctttcaaag |
100 |
Q |
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| T |
43985786 |
gattgaagttggaactgtgccaccactgttggatcttttagctacggaggataaaaccactcaggagaatgcaatctctgctttactgaagctttcaaag |
43985687 |
T |
|
| Q |
101 |
tatgcaaccgggcctgaaaatataatagaccataacggtttaaatcccgttgtgtatgtactgaaaaatggacttagtcttga |
183 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
43985686 |
tatgcaaccgggcctgaaaatataatagaccataacggtttaaagcccgttgtgtatgtactgaaaaatggacttagtcttga |
43985604 |
T |
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