View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0707_high_14 (Length: 360)
Name: NF0707_high_14
Description: NF0707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0707_high_14 |
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Alignment Details
Target: chr8 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 16 - 314
Target Start/End: Original strand, 9526541 - 9526839
Alignment:
| Q |
16 |
atttacatgtatatctaatatgtcaaaagaatttatctggagtctacacttaaatgatcaggggttattttttgatttagccggggcagattccgtatac |
115 |
Q |
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| T |
9526541 |
atttacatgtatatatcatatgtcaaaagaatttatctgcagtatacacataaatgatcaggggttattttttgatttaaccggggcagattccgtatac |
9526640 |
T |
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| Q |
116 |
aactacagagactaattctacgatataactgatatttatttaagatgccgatctctcccaacatttttggttctttataaacctaagtatcgaacatttg |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
9526641 |
aactacagagactaattctacgatataactgatatttatttaagatgccgatctctcccaacatttttggttctttataaacttaagtatcgaacatttg |
9526740 |
T |
|
| Q |
216 |
accacatacttaaaagattaaatgtcaataacatgtcattggtaaatgatcaaatgttatcggtatactttttatatttgtacttctatgaggtatcta |
314 |
Q |
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|| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9526741 |
actacatacttaaaagattaaatgtcaataatatgtcattggtaaatgatcaaatgttatcggtatactttttatatttgtacttctatgaggtatcta |
9526839 |
T |
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