View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0707_low_3 (Length: 728)
Name: NF0707_low_3
Description: NF0707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0707_low_3 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 587; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 587; E-Value: 0
Query Start/End: Original strand, 30 - 724
Target Start/End: Complemental strand, 18668470 - 18667779
Alignment:
Q |
30 |
ggttccaataacatcactgaactcagctgccgcaaaagcagcttgtgttcgtcgtccgccgcctgaaacactcacaacctaaaatctcatcaattttctt |
129 |
Q |
|
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
18668470 |
ggttccaata-catcactgaactcagctgccgcaaaagcagcttgtgttcgtcgtccgccgcctgaaacactcacaacctaacatctcatcaattttctt |
18668372 |
T |
 |
Q |
130 |
tctctcttccaattcccaaatcacgaaccctaattccaaatgtgactaaacccaaattctctatctcgatttctctcttctagattaacgaaactctttg |
229 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
18668371 |
tctctcttccaattcccaaatcacgaaccctaattccaaatgtgactaaacccaaattctctatctcgatttctctcttctagattaacgaaactctttg |
18668272 |
T |
 |
Q |
230 |
caggtttgtgattttctgtttctaatatatattctttggttaaaatgagcatattagattgtataaatcacccttttggtcattgttttcaattttgtaa |
329 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
18668271 |
caggtttgtgattttctgtttctaatatatattctttggttaaaatgagcatattagattgtataaatcacccttttggtcattgttttcaattttgtaa |
18668172 |
T |
 |
Q |
330 |
tcaaaatttgattttgcttatgttttgtcatctgggttgttttctaattcttattatcaatcaatattgtgtttcttttaannnnnnngggtgtgggtga |
429 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |
|
|
T |
18668171 |
tcaaaatttgattttgcttatgttttgtcatctgggttgttttctaattcttattatcaatcaatattgtgtttctttttatttttt--ggtgtgggtga |
18668074 |
T |
 |
Q |
430 |
gtattgcttttaccgtcatgattcatttagcaggataaagttgatattagaatcgaccctttaagctatggataaatatttaacttgaacggttcaaatt |
529 |
Q |
|
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
18668073 |
gtattgcttttaccgtcatgattcatgtagcaggataaagttgatattagaatcgaccctttaagctatggataaatatttaacttgaacggttcaaatt |
18667974 |
T |
 |
Q |
530 |
taacatcatggagtgttcatagctttatctatagatgtgttggatagtattgctattaacatgtgtatccacaaatgactagatttagtgatagttagga |
629 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |
|
|
T |
18667973 |
taacatcatggagtgttcatagctttatctatagatgtgttggatagtattgctattaacatgtgtatctacaaatgactagatttagtgatag-taggc |
18667875 |
T |
 |
Q |
630 |
tggcaaaaatttagag-ttcattaagtgatattggttcgttacattaaccactgttacttcagtgatgcatttgtgcagcttagttcatctcactc |
724 |
Q |
|
|
||| ||| ||| | | ||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
T |
18667874 |
tgggaaattttttgtgattcattaagtggtattggttggttacattagccactgttacttcagtgatgcatttgtgcagcttagttcatttcactc |
18667779 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 498; Significance: 0; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 498; E-Value: 0
Query Start/End: Original strand, 30 - 724
Target Start/End: Original strand, 15076287 - 15077004
Alignment:
Q |
30 |
ggttccaataacatcactgaactcagctgccgcaaaagcagcttgtgttcgtcgtccgccgcctgaaacactcacaacctaaaa---tctcatcaatttt |
126 |
Q |
|
|
|||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| | ||||||||||||| |
|
|
T |
15076287 |
ggttccaata-catcactgaactcagctgccgcaaaagcagcctgtgttcgtcgtccgccgcctgaaactctcacaacctaacaacatctcatcaatttt |
15076385 |
T |
 |
Q |
127 |
ctttctctcttccaattcccaaatcacgaaccctaattccaaatgtgactaaacccaaattctctatc-------------------tcgatttctctct |
207 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
T |
15076386 |
ctttctctcttccaattcccaaatcacgaaccctaattccaaatgtgactaaacccaaattctctatcactaggcacacactctatctcgatttctctct |
15076485 |
T |
 |
Q |
208 |
tctagattaacgaaactctttgcaggtttgtgattttctgtttctaatatatattctttggttaaaatgagcatattagattgtataaatcacccttttg |
307 |
Q |
|
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
15076486 |
tctagattaatgaaactctttgcaggtttgtgattttctgtttctaatatatattctttggttaaaatgagcatattagattgtataaatcacccttttg |
15076585 |
T |
 |
Q |
308 |
gtcattgttttcaattttgtaatcaaaatttgattttgcttatgttttgtcatctgggttgttttctaattcttattatcaatcaatattgtgtttcttt |
407 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
15076586 |
gtcattgttttcaattttgtaatcaaaatttgattttgcttatgttttgtcatctgggttgttttctaattcttattatcaatcaatattgtgtttcttt |
15076685 |
T |
 |
Q |
408 |
taannnnnnngggtgtgggtgagtattgcttttaccg---tcatgattcatttagcaggataaagttgatattagaatcgaccctttaagctatggataa |
504 |
Q |
|
|
| | |||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
15076686 |
ttatttttt---gtgtgggtgaatattgcttttaccgccgtcatgattcatgtagcaggataaagttgatattagaatcgaccctttaagctatggataa |
15076782 |
T |
 |
Q |
505 |
atatttaacttgaacggttcaaatttaacatcatggagtgttcatagctttatctatagatgtgttggatagtattgctattaacatgtgtatccacaaa |
604 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
T |
15076783 |
atatttaacttgaacggttcaaatttaacatcatggagtgttcatagctttatctatagatgtgttggatagtattgctattaacatgtgtatctacaaa |
15076882 |
T |
 |
Q |
605 |
tgactagatttagtgatagttaggat--ggcaaaaatttagag-ttcattaagtgatattggttcgttacattaaccactgttacttcagtgatgcattt |
701 |
Q |
|
|
||| ||||||||||||||| |||| | ||||||||||| | | ||||| ||||| |||||||| ||||||||| ||||||||||||||||||||||||| |
|
|
T |
15076883 |
tgaatagatttagtgatag-taggctggggcaaaaattttgtgattcatgaagtggtattggttggttacattagccactgttacttcagtgatgcattt |
15076981 |
T |
 |
Q |
702 |
gtgcagcttagttcatctcactc |
724 |
Q |
|
|
|||||||||||||||| |||||| |
|
|
T |
15076982 |
gtgcagcttagttcatttcactc |
15077004 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 252
Target Start/End: Original strand, 26389897 - 26389944
Alignment:
Q |
205 |
tcttctagattaacgaaactctttgcaggtttgtgattttctgtttct |
252 |
Q |
|
|
||||| |||||| |||||||||||||||||| || ||||||||||||| |
|
|
T |
26389897 |
tcttccagattagcgaaactctttgcaggttcgtcattttctgtttct |
26389944 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 186; Significance: 1e-100; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 269 - 517
Target Start/End: Original strand, 11033795 - 11034038
Alignment:
Q |
269 |
ttaaaatgagcatattagattgtataaatcacccttttggtcattgttttcaattttgtaatcaaaatttgattttgcttatgttttgtcatctgggttg |
368 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
11033795 |
ttaaaatgagcatattagattgtataaatcacccttttgatcattgttttcaattttgtaatcaaaatttgattttgcttatgttttgtcatctgggttg |
11033894 |
T |
 |
Q |
369 |
ttttctaattcttattatcaatcaatattgtgtttcttttaannnnnnngggtgtgggtgagtattgcttttaccgtcatgattcatttagcaggataaa |
468 |
Q |
|
|
|||||||||||||||| |||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||| |||||||||||| |
|
|
T |
11033895 |
ttttctaattcttatt----atcaatattgtgtttcttttta-ttttttgggtgtgggtcagtattgcttttaccgtcatgattcatgtagcaggataaa |
11033989 |
T |
 |
Q |
469 |
gttgatattagaatcgaccctttaagctatggataaatatttaacttga |
517 |
Q |
|
|
||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
T |
11033990 |
gttgatattagaatcaaccctttaagctatggataaatatttaacttga |
11034038 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 514 - 724
Target Start/End: Original strand, 11034067 - 11034269
Alignment:
Q |
514 |
ttgaacggttcaaatttaacatcatggagtgttcatagctttatctatagatgtgttggatagtattgctattaacatgtgtatccacaaatgactagat |
613 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||| ||||||||||||| |
|
|
T |
11034067 |
ttgaacagttcaaatttaacatcatggagtgttcatagctttatttatagatgtgttggatagtattggtattaacatgtttatctacaaatgactaga- |
11034165 |
T |
 |
Q |
614 |
ttagtgatagttaggatggcaaaaatttagag-ttcattaagtgatattggttcgttacattaaccactgttacttcagtgatgcatttgtgcagcttag |
712 |
Q |
|
|
||| || |||||||||||||| | ||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| |||||||||| |
|
|
T |
11034166 |
-tag-------tatcctggcaaaaatttagtgattcattaagtggtattggttggttacattagccactgttacttcagtgatgcatttttgcagcttag |
11034257 |
T |
 |
Q |
713 |
ttcatctcactc |
724 |
Q |
|
|
||||| |||||| |
|
|
T |
11034258 |
ttcatttcactc |
11034269 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 11033673 - 11033739
Alignment:
Q |
205 |
tcttctagattaacgaaactctttgcaggtttgtgattttctgtttctaatatatattctttggtta |
271 |
Q |
|
|
||||| || ||||||||| ||||||||||||||||||||| ||||||||| ||||||||||| |||| |
|
|
T |
11033673 |
tcttccagtttaacgaaaatctttgcaggtttgtgattttttgtttctaaaatatattctttagtta |
11033739 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 105; Significance: 5e-52; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 269 - 390
Target Start/End: Complemental strand, 38899050 - 38898927
Alignment:
Q |
269 |
ttaaaatgagcatattagatt--gtataaatcacccttttggtcattgttttcaattttgtaatcaaaatttgattttgcttatgttttgtcatctgggt |
366 |
Q |
|
|
||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
38899050 |
ttaaaatgagcatattagattttgtataaatcacccttttgatcactgttttcaattttgtaatcaaaatttgattttgcttatgttttgtcatctgggt |
38898951 |
T |
 |
Q |
367 |
tgttttctaattcttattatcaat |
390 |
Q |
|
|
|||||||||||||||||||||||| |
|
|
T |
38898950 |
tgttttctaattcttattatcaat |
38898927 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 269 - 390
Target Start/End: Complemental strand, 23439795 - 23439674
Alignment:
Q |
269 |
ttaaaatgagcatattagattgtataaatcacccttttggtcattgttttcaattttgtaatcaaaatttgattttgcttatgttttgtcatctgggttg |
368 |
Q |
|
|
||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||| |
|
|
T |
23439795 |
ttaaaatgagcatattagattgtataaatcagccttttgatcattgttttcaattttgtaatcaaaatttgattttgcttatgttttatcctctgagttg |
23439696 |
T |
 |
Q |
369 |
ttttctaattcttattatcaat |
390 |
Q |
|
|
|||||||||||||||||||||| |
|
|
T |
23439695 |
ttttctaattcttattatcaat |
23439674 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 205 - 271
Target Start/End: Complemental strand, 38899173 - 38899107
Alignment:
Q |
205 |
tcttctagattaacgaaactctttgcaggtttgtgattttctgtttctaatatatattctttggtta |
271 |
Q |
|
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
38899173 |
tcttccagattaacgaaactctttgcaggtttgtgattttctgtttctaatatatattctttggtta |
38899107 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 23439911 - 23439851
Alignment:
Q |
211 |
agattaacgaaactctttgcaggtttgtgattttctgtttctaatatatattctttggtta |
271 |
Q |
|
|
||||||||||||||||| |||||||||||||||||| ||| | | |||||||||||||||| |
|
|
T |
23439911 |
agattaacgaaactcttcgcaggtttgtgattttctatttttgaaatatattctttggtta |
23439851 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 189
Target Start/End: Complemental strand, 38899380 - 38899350
Alignment:
Q |
159 |
ctaattccaaatgtgactaaacccaaattct |
189 |
Q |
|
|
||||||||||||||||||||||||||||||| |
|
|
T |
38899380 |
ctaattccaaatgtgactaaacccaaattct |
38899350 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 81; Significance: 1e-37; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 516 - 624
Target Start/End: Original strand, 21941435 - 21941542
Alignment:
Q |
516 |
gaacggttcaaatttaacatcatggagtgttcatagctttatctatagatgtgttggatagtattgctattaacatgtgtatccacaaatgactagattt |
615 |
Q |
|
|
|||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||| |||| |||||||||||||||| |
|
|
T |
21941435 |
gaacagttcaaatttaacatcatggagtgttcatagatttatctatagatgtgttggacagtattactattaacatgt-tatctacaaatgactagattt |
21941533 |
T |
 |
Q |
616 |
agtgatagt |
624 |
Q |
|
|
||||||||| |
|
|
T |
21941534 |
agtgatagt |
21941542 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 516 - 675
Target Start/End: Original strand, 22182440 - 22182600
Alignment:
Q |
516 |
gaacggttcaaatttaacatcatggagtgttcatagctttatctatagatgtgttggatagtattgctattaacatgtgtatccacaaatgactagattt |
615 |
Q |
|
|
|||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||| | |||| |||||||||||| |||| |||||||||||||||| |
|
|
T |
22182440 |
gaacagttcaaattaaacatcatggagtgtttatagctttatctatagatgtgttggacaatattactattaacatgt-tatctacaaatgactagattt |
22182538 |
T |
 |
Q |
616 |
agtgatagttaggat--ggcaaaaatttagag-ttcattaagtgatattggttcgttacatta |
675 |
Q |
|
|
||||| || |||| | ||||||||||||| | |||||||| || |||||||| ||| ||||| |
|
|
T |
22182539 |
agtgacag-taggctgaggcaaaaatttagtgattcattaactggtattggttggttgcatta |
22182600 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 7230154 - 7230059
Alignment:
Q |
295 |
aatcacccttttggtcattgttttcaattttgtaatcaaaatttgattttgcttatgttttgtcatctgggttgttttctaattcttattatcaat |
390 |
Q |
|
|
||||||||||||| ||||||||||| | |||||||||||||||||||||| ||||| |||| |||||||||||||||| ||||||| ||||||||| |
|
|
T |
7230154 |
aatcacccttttgatcattgttttcgaatttgtaatcaaaatttgatttttcttattttttttcatctgggttgttttgtaattctcattatcaat |
7230059 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 420 - 515
Target Start/End: Original strand, 21940975 - 21941070
Alignment:
Q |
420 |
gtgtgggtgagtattgcttttaccgtcatgattcatttagcaggataaagttgatattagaatcgaccctttaagctatggataaatatttaactt |
515 |
Q |
|
|
||||||||||||||||||| |||| ||||||||||| |||||||| ||||||||||||||||| ||||||| | ||||||||||||||||||||| |
|
|
T |
21940975 |
gtgtgggtgagtattgcttctaccatcatgattcatgcagcaggattaagttgatattagaatcaaccctttcacctatggataaatatttaactt |
21941070 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 583 - 717
Target Start/End: Original strand, 21929143 - 21929279
Alignment:
Q |
583 |
tattaacatgtgtatccacaaatgactagatttagtgatagttaggatg--gcaaaaatttagag-ttcattaagtgatattggttcgttacattaacca |
679 |
Q |
|
|
||||||||||| |||| || | |||||||||||||||||||| ||| || |||||||||||| | ||||||||||| |||||||| |||||||| ||| |
|
|
T |
21929143 |
tattaacatgt-tatctaccactgactagatttagtgatagt-aggctgaggcaaaaatttagtgattcattaagtggtattggttggttacattggcca |
21929240 |
T |
 |
Q |
680 |
ctgtt-acttcagtgatgcatttgtgcagcttagttcat |
717 |
Q |
|
|
||||| ||||||||||||||||||||||||||||||||| |
|
|
T |
21929241 |
ctgtttacttcagtgatgcatttgtgcagcttagttcat |
21929279 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 460 - 513
Target Start/End: Original strand, 21929006 - 21929059
Alignment:
Q |
460 |
caggataaagttgatattagaatcgaccctttaagctatggataaatatttaac |
513 |
Q |
|
|
||||||||||| |||||||||||| ||||||||| ||||||||||||||||||| |
|
|
T |
21929006 |
caggataaagtggatattagaatcaaccctttaaactatggataaatatttaac |
21929059 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 514 - 565
Target Start/End: Original strand, 21929092 - 21929143
Alignment:
Q |
514 |
ttgaacggttcaaatttaacatcatggagtgttcatagctttatctatagat |
565 |
Q |
|
|
|||||||||| ||||||||||||||||||| |||||||||||| ||||||| |
|
|
T |
21929092 |
ttgaacggtttaaatttaacatcatggagtcatcatagctttatatatagat |
21929143 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 680 - 717
Target Start/End: Original strand, 21941618 - 21941655
Alignment:
Q |
680 |
ctgttacttcagtgatgcatttgtgcagcttagttcat |
717 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||||| |
|
|
T |
21941618 |
ctgttacttcagtgatacatttgtgcagcttagttcat |
21941655 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 652 - 698
Target Start/End: Original strand, 22122338 - 22122384
Alignment:
Q |
652 |
aagtgatattggttcgttacattaaccactgttacttcagtgatgca |
698 |
Q |
|
|
||||| ||||| || || ||||||||||||||||||||||||||||| |
|
|
T |
22122338 |
aagtggtattgattggtgacattaaccactgttacttcagtgatgca |
22122384 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 76; Significance: 9e-35; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 303 - 386
Target Start/End: Complemental strand, 971428 - 971345
Alignment:
Q |
303 |
ttttggtcattgttttcaattttgtaatcaaaatttgattttgcttatgttttgtcatctgggttgttttctaattcttattat |
386 |
Q |
|
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
T |
971428 |
ttttgatcattgttttcaattttgtaatcaaaatttgattttgcttatgttttatcatctgggttgttttctaattcttattat |
971345 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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