View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0707_low_49 (Length: 255)
Name: NF0707_low_49
Description: NF0707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0707_low_49 |
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Alignment Details
Target: chr3 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 44 - 239
Target Start/End: Original strand, 53127325 - 53127520
Alignment:
| Q |
44 |
ttgcgtgacgggtgggttgctcaactaacctctgttccgccaccgtcccaattactacaaacttgttttgtcccattctaatttcgtcagctgaaaatgg |
143 |
Q |
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| T |
53127325 |
ttgcgtgacgggtgggttgctcaactaacctctgttccgccaccgtcccaattactacaaacttgttttgtcccattctaatttcgtcagctgaaaatgg |
53127424 |
T |
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| Q |
144 |
aggaaattccaaattattttcaagtacattatcgattattacgctaataaaataacttaattacagctttagaaatacacggtaaatttatctaag |
239 |
Q |
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| T |
53127425 |
aggaaattccaaattattttcaagtacattatcgattattacgctaataaaataacttaattacagctttagaaatacacggtaaatttatctaag |
53127520 |
T |
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