View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0707_low_76 (Length: 201)
Name: NF0707_low_76
Description: NF0707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0707_low_76 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 147 - 201
Target Start/End: Original strand, 43544099 - 43544153
Alignment:
| Q |
147 |
gcggcggtggttttggccctagattcggcaacggtcacgcaagtgatagaaagta |
201 |
Q |
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| T |
43544099 |
gcggtggtggttttggccctagattcggcaacggtcacgcaagtgatagaaagta |
43544153 |
T |
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