View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0708_low_22 (Length: 280)

Name: NF0708_low_22
Description: NF0708
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0708_low_22
NF0708_low_22
[»] chr7 (40 HSPs)
chr7 (45-157)||(4612087-4612199)
chr7 (45-157)||(19072918-19073030)
chr7 (45-159)||(31466356-31466470)
chr7 (45-157)||(36905675-36905787)
chr7 (45-157)||(47713502-47713614)
chr7 (45-157)||(48531471-48531583)
chr7 (45-159)||(36819845-36819959)
chr7 (45-157)||(47081129-47081241)
chr7 (45-158)||(28185410-28185523)
chr7 (45-157)||(23473969-23474081)
chr7 (45-157)||(31110774-31110886)
chr7 (45-157)||(37950945-37951057)
chr7 (45-157)||(42834292-42834404)
chr7 (45-157)||(47538072-47538184)
chr7 (45-157)||(36859208-36859320)
chr7 (45-157)||(37231563-37231675)
chr7 (45-128)||(44479750-44479833)
chr7 (45-143)||(21392167-21392265)
chr7 (45-158)||(32618941-32619054)
chr7 (45-157)||(2400434-2400546)
chr7 (45-157)||(10464115-10464227)
chr7 (45-157)||(42086638-42086750)
chr7 (56-159)||(34478006-34478109)
chr7 (45-157)||(35500747-35500859)
chr7 (45-126)||(18795171-18795252)
chr7 (45-126)||(46657782-46657863)
chr7 (161-222)||(35725481-35725542)
chr7 (45-128)||(36643311-36643394)
chr7 (45-126)||(33613362-33613442)
chr7 (45-126)||(44389317-44389398)
chr7 (98-157)||(24151581-24151640)
chr7 (63-126)||(31497740-31497803)
chr7 (45-115)||(3680390-3680460)
chr7 (48-157)||(42493517-42493626)
chr7 (45-157)||(16807098-16807210)
chr7 (45-110)||(30462173-30462238)
chr7 (45-110)||(40348556-40348621)
chr7 (122-163)||(42086864-42086905)
chr7 (45-77)||(29770554-29770586)
chr7 (45-165)||(38069043-38069163)
[»] chr3 (47 HSPs)
chr3 (45-157)||(54840128-54840240)
chr3 (45-157)||(21907145-21907257)
chr3 (45-157)||(38833812-38833924)
chr3 (45-157)||(45167448-45167560)
chr3 (45-157)||(7459820-7459932)
chr3 (45-160)||(8559002-8559117)
chr3 (45-159)||(51062539-51062653)
chr3 (45-157)||(10571144-10571256)
chr3 (45-157)||(18659201-18659313)
chr3 (45-157)||(29728098-29728210)
chr3 (45-165)||(48706838-48706958)
chr3 (45-157)||(52668486-52668598)
chr3 (45-157)||(37833049-37833161)
chr3 (45-146)||(1327461-1327562)
chr3 (45-157)||(32285176-32285288)
chr3 (39-154)||(47638198-47638313)
chr3 (45-143)||(43138000-43138098)
chr3 (45-157)||(17053013-17053125)
chr3 (45-157)||(32951136-32951248)
chr3 (55-159)||(53066529-53066633)
chr3 (62-157)||(34827419-34827514)
chr3 (48-146)||(38492203-38492301)
chr3 (45-146)||(25097198-25097299)
chr3 (42-153)||(36665164-36665275)
chr3 (45-159)||(49058005-49058119)
chr3 (45-157)||(46483699-46483809)
chr3 (56-157)||(4238494-4238595)
chr3 (45-126)||(35717886-35717967)
chr3 (45-157)||(3547420-3547533)
chr3 (45-146)||(48143912-48144013)
chr3 (45-157)||(54673927-54674039)
chr3 (45-157)||(7671313-7671425)
chr3 (106-157)||(10435329-10435380)
chr3 (45-95)||(27849100-27849150)
chr3 (106-159)||(27849146-27849199)
chr3 (45-128)||(15503172-15503255)
chr3 (42-100)||(3086287-3086345)
chr3 (45-159)||(9484594-9484708)
chr3 (45-95)||(10435283-10435333)
chr3 (45-159)||(29793325-29793439)
chr3 (45-159)||(34555149-34555263)
chr3 (39-112)||(45093864-45093935)
chr3 (45-158)||(42098574-42098687)
chr3 (45-110)||(50673724-50673789)
chr3 (45-157)||(29455655-29455767)
chr3 (52-128)||(39098992-39099068)
chr3 (45-157)||(49076373-49076485)
[»] chr1 (41 HSPs)
chr1 (47-157)||(38458881-38458991)
chr1 (45-157)||(32988349-32988461)
chr1 (45-157)||(25531927-25532039)
chr1 (45-157)||(50539409-50539521)
chr1 (45-159)||(30529048-30529162)
chr1 (45-158)||(49805251-49805364)
chr1 (45-158)||(50876513-50876626)
chr1 (45-157)||(1849849-1849962)
chr1 (45-157)||(37281241-37281353)
chr1 (45-157)||(42708649-42708761)
chr1 (45-159)||(29161992-29162106)
chr1 (45-157)||(16265182-16265294)
chr1 (45-157)||(16266311-16266423)
chr1 (45-157)||(39354264-39354376)
chr1 (45-157)||(48264811-48264923)
chr1 (45-157)||(52379138-52379250)
chr1 (42-157)||(4605145-4605260)
chr1 (45-155)||(48219644-48219754)
chr1 (45-157)||(3898571-3898683)
chr1 (45-157)||(26441783-26441895)
chr1 (45-157)||(23569674-23569786)
chr1 (45-157)||(24982500-24982612)
chr1 (45-157)||(43680219-43680331)
chr1 (55-157)||(45234849-45234951)
chr1 (47-140)||(16751470-16751563)
chr1 (39-140)||(47222358-47222459)
chr1 (45-157)||(41501607-41501719)
chr1 (45-126)||(3529325-3529406)
chr1 (45-140)||(14075883-14075977)
chr1 (49-126)||(21034560-21034637)
chr1 (45-157)||(50481425-50481537)
chr1 (45-161)||(45299314-45299430)
chr1 (45-126)||(48376297-48376375)
chr1 (45-126)||(31971418-31971499)
chr1 (45-120)||(23330601-23330677)
chr1 (45-77)||(32565895-32565927)
chr1 (45-115)||(27990757-27990827)
chr1 (45-151)||(32968119-32968225)
chr1 (43-157)||(41855675-41855789)
chr1 (45-126)||(50295892-50295973)
chr1 (56-120)||(38737869-38737933)
[»] chr8 (40 HSPs)
chr8 (45-158)||(3293100-3293213)
chr8 (45-157)||(37710048-37710160)
chr8 (45-155)||(38845756-38845866)
chr8 (45-157)||(8350880-8350992)
chr8 (45-157)||(30380679-30380791)
chr8 (45-159)||(23249001-23249115)
chr8 (45-154)||(40013800-40013909)
chr8 (45-157)||(30290073-30290185)
chr8 (45-157)||(38739806-38739918)
chr8 (45-157)||(43066275-43066387)
chr8 (45-157)||(29791091-29791203)
chr8 (45-159)||(2986474-2986588)
chr8 (45-157)||(2805476-2805588)
chr8 (45-157)||(6470994-6471106)
chr8 (45-157)||(45081961-45082073)
chr8 (45-158)||(13138131-13138244)
chr8 (45-158)||(14522529-14522641)
chr8 (45-157)||(18809425-18809537)
chr8 (45-146)||(39361274-39361375)
chr8 (45-157)||(31127805-31127917)
chr8 (45-140)||(45253895-45253990)
chr8 (45-157)||(1580768-1580877)
chr8 (45-157)||(12893677-12893789)
chr8 (45-146)||(6470625-6470726)
chr8 (45-126)||(886100-886181)
chr8 (45-140)||(44123819-44123914)
chr8 (45-135)||(23764471-23764561)
chr8 (45-126)||(10658126-10658207)
chr8 (42-121)||(14847355-14847434)
chr8 (45-126)||(20167608-20167689)
chr8 (45-114)||(25256482-25256551)
chr8 (51-157)||(3383563-3383669)
chr8 (45-126)||(42786047-42786128)
chr8 (42-132)||(35584120-35584210)
chr8 (45-102)||(7431268-7431325)
chr8 (45-110)||(7603354-7603419)
chr8 (42-99)||(20671314-20671371)
chr8 (45-85)||(9302425-9302465)
chr8 (45-77)||(11854674-11854706)
chr8 (45-157)||(44887664-44887776)
[»] chr4 (59 HSPs)
chr4 (45-158)||(5744082-5744195)
chr4 (45-159)||(46212348-46212462)
chr4 (45-157)||(4264283-4264395)
chr4 (45-157)||(7738819-7738931)
chr4 (45-157)||(3442344-3442456)
chr4 (45-157)||(47579435-47579547)
chr4 (45-159)||(3443385-3443499)
chr4 (45-159)||(20678586-20678700)
chr4 (45-159)||(28152140-28152254)
chr4 (45-157)||(4209508-4209620)
chr4 (45-157)||(5735420-5735532)
chr4 (45-157)||(26205704-26205816)
chr4 (45-164)||(1377181-1377299)
chr4 (56-157)||(6494750-6494851)
chr4 (45-146)||(49768594-49768695)
chr4 (45-157)||(3901139-3901251)
chr4 (45-157)||(18359973-18360085)
chr4 (45-157)||(36602843-36602955)
chr4 (45-157)||(39260132-39260244)
chr4 (45-157)||(45198340-45198452)
chr4 (45-157)||(46803781-46803893)
chr4 (45-152)||(5123162-5123269)
chr4 (45-154)||(19525717-19525826)
chr4 (45-146)||(28166423-28166524)
chr4 (56-157)||(55190566-55190667)
chr4 (45-157)||(25644508-25644620)
chr4 (45-158)||(19170538-19170651)
chr4 (45-157)||(6922940-6923052)
chr4 (45-157)||(37688033-37688145)
chr4 (45-157)||(39786357-39786469)
chr4 (45-157)||(19652256-19652368)
chr4 (47-163)||(23603641-23603757)
chr4 (45-159)||(21858917-21859031)
chr4 (45-159)||(21914780-21914894)
chr4 (45-152)||(19633854-19633961)
chr4 (45-140)||(50033169-50033264)
chr4 (45-128)||(23256084-23256167)
chr4 (45-140)||(50035685-50035780)
chr4 (45-126)||(51736985-51737066)
chr4 (45-157)||(40250726-40250838)
chr4 (45-137)||(19631457-19631550)
chr4 (44-158)||(47278276-47278390)
chr4 (45-126)||(39195521-39195602)
chr4 (56-123)||(19731200-19731267)
chr4 (45-140)||(55997260-55997355)
chr4 (98-142)||(42187015-42187059)
chr4 (45-100)||(26660559-26660614)
chr4 (45-135)||(39194061-39194151)
chr4 (45-87)||(50971608-50971650)
chr4 (48-142)||(53568503-53568596)
chr4 (45-144)||(37164029-37164128)
chr4 (45-159)||(31152659-31152773)
chr4 (56-126)||(35755214-35755284)
chr4 (45-99)||(46608271-46608325)
chr4 (45-158)||(8525367-8525480)
chr4 (59-140)||(10181150-10181231)
chr4 (91-152)||(35064171-35064232)
chr4 (45-74)||(42187062-42187091)
chr4 (94-126)||(9965437-9965469)
[»] chr2 (44 HSPs)
chr2 (45-158)||(27559724-27559837)
chr2 (45-157)||(34827061-34827173)
chr2 (45-158)||(44330533-44330646)
chr2 (45-159)||(42038672-42038786)
chr2 (45-155)||(44283281-44283391)
chr2 (45-157)||(7442891-7443003)
chr2 (45-157)||(18718388-18718500)
chr2 (48-157)||(4045233-4045342)
chr2 (45-157)||(9877083-9877195)
chr2 (45-157)||(23671525-23671637)
chr2 (45-157)||(40425249-40425361)
chr2 (45-158)||(20517567-20517680)
chr2 (45-157)||(3987232-3987344)
chr2 (45-157)||(14372226-14372338)
chr2 (45-157)||(14707535-14707646)
chr2 (45-157)||(39418020-39418132)
chr2 (45-157)||(41172757-41172869)
chr2 (45-151)||(36198957-36199063)
chr2 (45-146)||(30708877-30708978)
chr2 (45-158)||(32775902-32776015)
chr2 (45-157)||(41463517-41463629)
chr2 (45-151)||(40598278-40598384)
chr2 (42-126)||(4083353-4083437)
chr2 (45-157)||(43925074-43925186)
chr2 (45-157)||(24282960-24283072)
chr2 (42-157)||(38963665-38963780)
chr2 (47-157)||(13399105-13399215)
chr2 (45-126)||(332423-332504)
chr2 (45-152)||(1110441-1110548)
chr2 (45-156)||(38137533-38137643)
chr2 (45-158)||(42020202-42020316)
chr2 (45-126)||(16941842-16941923)
chr2 (45-126)||(17012507-17012588)
chr2 (45-151)||(4045999-4046104)
chr2 (42-114)||(43409431-43409503)
chr2 (63-162)||(30776201-30776294)
chr2 (52-157)||(27667958-27668063)
chr2 (45-135)||(2543858-2543948)
chr2 (48-126)||(7106430-7106508)
chr2 (45-99)||(15177427-15177481)
chr2 (45-159)||(38963793-38963907)
chr2 (45-126)||(5030315-5030396)
chr2 (123-159)||(20917727-20917763)
chr2 (55-135)||(42951543-42951622)
[»] chr6 (24 HSPs)
chr6 (45-157)||(31854967-31855079)
chr6 (42-157)||(8796195-8796310)
chr6 (45-158)||(22020425-22020538)
chr6 (45-158)||(25435560-25435673)
chr6 (45-159)||(18992052-18992166)
chr6 (45-158)||(20662058-20662171)
chr6 (39-165)||(30237310-30237436)
chr6 (45-157)||(643431-643543)
chr6 (45-157)||(11114714-11114826)
chr6 (45-157)||(7097873-7097985)
chr6 (45-157)||(16696016-16696128)
chr6 (45-157)||(24150890-24151002)
chr6 (42-157)||(25163310-25163425)
chr6 (45-157)||(13206953-13207065)
chr6 (45-163)||(33121691-33121809)
chr6 (45-157)||(19068771-19068883)
chr6 (45-105)||(29986210-29986270)
chr6 (117-157)||(29979024-29979064)
chr6 (45-159)||(9022838-9022952)
chr6 (52-110)||(12869377-12869435)
chr6 (45-159)||(24798502-24798616)
chr6 (45-110)||(19788625-19788690)
chr6 (45-157)||(2141568-2141680)
chr6 (45-157)||(32541433-32541545)
[»] chr5 (40 HSPs)
chr5 (45-157)||(32002014-32002126)
chr5 (45-157)||(32334638-32334750)
chr5 (45-157)||(39894930-39895042)
chr5 (45-161)||(4924834-4924950)
chr5 (45-157)||(5212922-5213034)
chr5 (45-157)||(29627417-29627529)
chr5 (45-157)||(42148456-42148568)
chr5 (51-159)||(5364579-5364687)
chr5 (45-159)||(39036559-39036673)
chr5 (45-158)||(40512679-40512792)
chr5 (45-157)||(22613709-22613821)
chr5 (45-157)||(23988726-23988838)
chr5 (45-157)||(35447997-35448109)
chr5 (39-158)||(43517059-43517178)
chr5 (45-159)||(35290435-35290549)
chr5 (45-158)||(37843574-37843687)
chr5 (45-157)||(4299833-4299945)
chr5 (45-157)||(14475230-14475342)
chr5 (45-157)||(16048234-16048346)
chr5 (45-157)||(39405913-39406025)
chr5 (45-152)||(37516294-37516401)
chr5 (45-159)||(38698112-38698226)
chr5 (45-157)||(970287-970399)
chr5 (45-157)||(41411157-41411269)
chr5 (45-157)||(1830804-1830916)
chr5 (45-163)||(2864103-2864221)
chr5 (45-143)||(25563649-25563747)
chr5 (55-157)||(43067380-43067482)
chr5 (45-126)||(19087647-19087728)
chr5 (39-119)||(19868724-19868804)
chr5 (45-140)||(40316271-40316366)
chr5 (45-128)||(30779775-30779858)
chr5 (45-158)||(13548212-13548325)
chr5 (45-158)||(20040367-20040480)
chr5 (45-158)||(30721637-30721750)
chr5 (48-157)||(16954775-16954881)
chr5 (46-77)||(19889803-19889834)
chr5 (45-99)||(31191129-31191183)
chr5 (39-140)||(25946147-25946248)
chr5 (45-157)||(1098175-1098287)
[»] scaffold0459 (1 HSPs)
scaffold0459 (45-146)||(12901-13002)
[»] scaffold0366 (2 HSPs)
scaffold0366 (45-146)||(10542-10643)
scaffold0366 (45-146)||(14208-14309)
[»] scaffold0051 (1 HSPs)
scaffold0051 (45-157)||(41217-41329)
[»] scaffold0007 (1 HSPs)
scaffold0007 (45-157)||(15216-15328)
[»] scaffold0092 (1 HSPs)
scaffold0092 (45-146)||(44119-44220)
[»] scaffold0027 (1 HSPs)
scaffold0027 (45-154)||(117470-117579)
[»] scaffold0604 (1 HSPs)
scaffold0604 (45-157)||(1263-1369)
[»] scaffold0340 (1 HSPs)
scaffold0340 (60-157)||(14502-14599)
[»] scaffold0111 (1 HSPs)
scaffold0111 (56-140)||(38249-38333)
[»] scaffold0687 (1 HSPs)
scaffold0687 (45-110)||(1036-1101)
[»] scaffold0221 (1 HSPs)
scaffold0221 (45-157)||(5376-5488)


Alignment Details
Target: chr7 (Bit Score: 101; Significance: 4e-50; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 4612199 - 4612087
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4612199 atcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagg 4612100  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  4612099 gacggagggagta 4612087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 19072918 - 19073030
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  19072918 atcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaaatcaataatgtatattgtcaactgggtcatttattaagg 19073017  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  19073018 gacggagggagta 19073030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 45 - 159
Target Start/End: Complemental strand, 31466470 - 31466356
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||| ||||| || |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  31466470 atcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatttattaagg 31466371  T
Q  145 gatggagggagtaat 159  Q
    || ||||||||||||    
T  31466370 gacggagggagtaat 31466356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 36905675 - 36905787
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||| |||||||||||||||| ||||||||||| |||    
T  36905675 atcttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatgtatattgtcaactgggtcatttatttagg 36905774  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  36905775 gacggagggagta 36905787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 47713614 - 47713502
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  47713614 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagg 47713515  T
Q  145 gatggagggagta 157  Q
    ||  |||||||||    
T  47713514 gacagagggagta 47713502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 48531471 - 48531583
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  48531471 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattaagg 48531570  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  48531571 gacggagggagta 48531583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 45 - 159
Target Start/End: Original strand, 36819845 - 36819959
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  36819845 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagg 36819944  T
Q  145 gatggagggagtaat 159  Q
    || ||||||||||||    
T  36819945 gacggagggagtaat 36819959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 47081129 - 47081241
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||||||||||||||||||||||||| |||| || |||||| |||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  47081129 atcttacatgatattatttatctttgtggattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagg 47081228  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  47081229 gacggagggagta 47081241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 28185523 - 28185410
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| ||||||||||||  ||||||||||||||    
T  28185523 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactatgtcatttattaagg 28185424  T
Q  145 gatggagggagtaa 158  Q
    || |||| ||||||    
T  28185423 gacggagagagtaa 28185410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 23474081 - 23473969
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||| ||||| ||  ||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  23474081 atcttacatgatattatttatctttgtaaattagtaggaaagtatggtcaaagtatgtaaagtcaataatgtatattgtcaactaggtcatttattaagg 23473982  T
Q  145 gatggagggagta 157  Q
    || ||| ||||||    
T  23473981 gacggatggagta 23473969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 31110774 - 31110886
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| ||||||||| | |||||||||| |||||||||| |||||||||||||||| | ||||||||| |||    
T  31110774 atcttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatttcaagtcaattatgtatattgtcaactggatcatttatttagg 31110873  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  31110874 gacggagggagta 31110886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 37951057 - 37950945
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| || ||||| ||| |||||||||||||| |||||||||||| |||||||||||||||    
T  37951057 atcttacatgatattatttatctttgtgaattagtaaaaaagtatgatcaaaatatatcaagtcaataatgcatattgtcaactaggtcatttattaagg 37950958  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  37950957 gacggagggagta 37950945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 42834404 - 42834292
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||| ||||||||| |||||||| ||| |||||||||||||||    
T  42834404 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaaatcaataatgcatattgtcgactaggtcatttattaagg 42834305  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  42834304 gacggagggagta 42834292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 47538072 - 47538184
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| ||||||| |||||||||||| ||||||||||||||||||| |||||| ||||||||    
T  47538072 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaggtatgtcaagtccataatgtatattgtcaactaggtcatctattaagg 47538171  T
Q  145 gatggagggagta 157  Q
    |  ||||||||||    
T  47538172 ggcggagggagta 47538184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 36859320 - 36859208
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| |||| ||||||||| ||||||||||||  ||||||||||||||    
T  36859320 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaaatcaataatgcatattgtcaactaagtcatttattaagg 36859221  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  36859220 gacggagggagta 36859208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 37231675 - 37231563
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| | ||||||||||||||||||||||||| |||| |||||| |||    
T  37231675 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcgtttattgagg 37231576  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  37231575 gacggagggagta 37231563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 45 - 128
Target Start/End: Complemental strand, 44479833 - 44479750
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 128  Q
    ||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||    
T  44479833 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaact 44479750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 21392167 - 21392265
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaag 143  Q
    ||||||||||||||||||||||||||||||||| || |||| | ||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||    
T  21392167 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagttaataatgtatattgtcaactaggttatttattaag 21392265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 32619054 - 32618941
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| || ||||||||| | |||||||||||| |||||||||| | |||||||||||||||    
T  32619054 atcttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaagtatataaagtcaataatgcatattgtcaattaggtcatttattaagg 32618955  T
Q  145 gatggagggagtaa 158  Q
    || ||| |||||||    
T  32618954 gacggaaggagtaa 32618941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 2400434 - 2400546
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| | |||||||||||| ||||||||||||   |||||||||||||    
T  2400434 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatataaagtcaataatgcatattgtcaactatatcatttattaagg 2400533  T
Q  145 gatggagggagta 157  Q
    || ||||| ||||    
T  2400534 gacggaggaagta 2400546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 10464227 - 10464115
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| |||||||||||||||||| ||||||| || |||| | |||||||||||| | ||||||||||||||||||||||||| ||||||||||| |||    
T  10464227 atcttatatgatattatttatctttatgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagg 10464128  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  10464127 gacggagggagta 10464115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 42086750 - 42086638
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||| ||| |||||||||||||  ||||||||||||   |||||||||||||    
T  42086750 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaaatatatcaagtcaataatacatattgtcaactaaatcatttattaagg 42086651  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  42086650 gacggagggagta 42086638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 56 - 159
Target Start/End: Complemental strand, 34478109 - 34478006
Alignment:
Q  56 tattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagggatggagggag 155  Q
    |||||||||||||||||||||| || |||| | |||||||||||||| || |||||||||||||||||||||| ||||||||||| ||||| ||||||||    
T  34478109 tattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaaatcaataatgtatattgtcaactaggtcatttattgagggacggagggag 34478010  T
Q  156 taat 159  Q
    ||||    
T  34478009 taat 34478006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 35500859 - 35500747
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||| ||||||| || |||| | | |||||||||| | ||||||||||||||||||||||||| ||||| ||||| |||    
T  35500859 atcttacatgatattatttatctttatgaattagtagaaaaatatagtcaaagtatcttaagtcaataatgtatattgtcaactaggtcaattattgagg 35500760  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  35500759 gacggagggagta 35500747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 18795252 - 18795171
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||||||||| ||||||||||| |||||||||||    
T  18795252 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtcaataatatatattgtcaa 18795171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 46657782 - 46657863
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    ||||||||||||||||||||||||||| |||||||| |||| | ||||||||| |||| ||||||||||||||| |||||||    
T  46657782 atcttacatgatattatttatctttgtaaattaatagaaaaatatggtcaaagaatgttaagtcaataatgtatgttgtcaa 46657863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 35725542 - 35725481
Alignment:
Q  161 tttatggaaaatggaaaatgacataaattttaatgactaggggattagtgtgatgattttag 222  Q
    ||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||    
T  35725542 tttatggaaaatggaaagtgacataaattttaatgactaggggactaatgtgatgattttag 35725481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 36643311 - 36643394
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 128  Q
    |||||| |||||||||||||||||||||||||| |  |||| | |||||||||||| | || ||||||||||||||||||||||    
T  36643311 atcttatatgatattatttatctttgtgaattagtggaaaaatatggtcaaagtatattaaatcaataatgtatattgtcaact 36643394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 33613362 - 33613442
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    ||||||||||||||||||||| ||||||||||| || |||| | |||||||| ||| | ||||||||||||||||| |||||    
T  33613362 atcttacatgatattatttatttttgtgaattagtaaaaaaatatggtcaaa-tatattaagtcaataatgtatatggtcaa 33613442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 44389398 - 44389317
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    ||||||||||||||||||||| ||||||||||| || |||| | |  ||||| ||||| ||||||||| |||||||||||||    
T  44389398 atcttacatgatattatttatttttgtgaattagtagaaaaatattatcaaaatatgttaagtcaatagtgtatattgtcaa 44389317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 157
Target Start/End: Complemental strand, 24151640 - 24151581
Alignment:
Q  98 tatgtcaagtcaataatgtatattgtcaacttggtcatttattaagggatggagggagta 157  Q
    ||||| ||||||||||||||||||||||| | |||||  |||||||||| ||||||||||    
T  24151640 tatgttaagtcaataatgtatattgtcaaataggtcacctattaagggacggagggagta 24151581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 31497803 - 31497740
Alignment:
Q  63 tatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    ||||||||||||||| || |||| | |||||||| ||| | |||||||||||||||||||||||    
T  31497803 tatctttgtgaattagtagaaaaatatggtcaaattatattaagtcaataatgtatattgtcaa 31497740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 115
Target Start/End: Complemental strand, 3680460 - 3680390
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatg 115  Q
    |||||| |||||||||||||| |||||  |||| ||||||| |  ||||||| ||||||||||||||||||    
T  3680460 atcttatatgatattatttatatttgtatattagtataaaaataaggtcaaaatatgtcaagtcaataatg 3680390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 157
Target Start/End: Complemental strand, 42493626 - 42493517
Alignment:
Q  48 ttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagggat 147  Q
    ||||||||||||||||||||||||  |||| || |||| | |||||||||||||| | ||||||   | | |||||||| | |||||| ||||  ||||     
T  42493626 ttacatgatattatttatctttgtatattagtagaaaaatatggtcaaagtatgttaggtcaatcgcgcacattgtcaaataggtcatctattgtgggac 42493527  T
Q  148 ggagggagta 157  Q
    ||||||||||    
T  42493526 ggagggagta 42493517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 16807098 - 16807210
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || | ||||| | || | ||| ||||   |||||||||||| ||    
T  16807098 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgg 16807197  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  16807198 gacggagggagta 16807210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 30462173 - 30462238
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaa 110  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || |||||||    
T  30462173 atcttatatgatattatttatctttgtatattagtaaaaaaatatggtcaaagtaagttaagtcaa 30462238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 40348556 - 40348621
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaa 110  Q
    |||||| ||||||||||||||||||||  |||| || |||| | |||||||| ||||||| |||||    
T  40348556 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaaatatgtcaggtcaa 40348621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 163
Target Start/End: Original strand, 42086864 - 42086905
Alignment:
Q  122 gtcaacttggtcatttattaagggatggagggagtaatgttt 163  Q
    ||||||| ||||||||||| |||||||||||||||| |||||    
T  42086864 gtcaactaggtcatttatttagggatggagggagtactgttt 42086905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 29770586 - 29770554
Alignment:
Q  45 atcttacatgatattatttatctttgtgaatta 77  Q
    ||||| |||||||||||||||||||||||||||    
T  29770586 atcttccatgatattatttatctttgtgaatta 29770554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 165
Target Start/End: Complemental strand, 38069163 - 38069043
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || | ||||| | || | ||| ||||   |||||||||||  ||    
T  38069163 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 38069064  T
Q  145 gatggagggagtaatgtttat 165  Q
     | ||||||||||||| ||||    
T  38069063 aacggagggagtaatgcttat 38069043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 4e-50; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 54840240 - 54840128
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  54840240 atcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagg 54840141  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  54840140 gacggagggagta 54840128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 21907145 - 21907257
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  21907145 atcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgagtcatttattaagg 21907244  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  21907245 gacggagggagta 21907257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 38833812 - 38833924
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  38833812 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaaatatgtcaagtcaataatgtatattgtcaactgggtcatttattaagg 38833911  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  38833912 gacggagggagta 38833924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 45167448 - 45167560
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| | |||| ||||||||    
T  45167448 atcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaaatatgtcaagtcaataatgtatattgtcaactggatcatatattaagg 45167547  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  45167548 gacggagggagta 45167560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 7459932 - 7459820
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  7459932 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagg 7459833  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  7459832 gacggagggagta 7459820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 45 - 160
Target Start/End: Complemental strand, 8559117 - 8559002
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || ||| || |||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  8559117 atcttacatgatattatttatctttgtgaattagtagaaatgtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagg 8559018  T
Q  145 gatggagggagtaatg 160  Q
    || |||||||||||||    
T  8559017 gacggagggagtaatg 8559002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 45 - 159
Target Start/End: Original strand, 51062539 - 51062653
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | ||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||    
T  51062539 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattatcaactgagtcatttattaagg 51062638  T
Q  145 gatggagggagtaat 159  Q
    || ||||||||||||    
T  51062639 gacggagggagtaat 51062653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 10571256 - 10571144
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||| ||||||||||||||||||| ||||| ||||||| | |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  10571256 atcttacttgatattatttatctttgtaaattagtataaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggttatttattaagg 10571157  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  10571156 gacggagggagta 10571144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 18659201 - 18659313
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||| ||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  18659201 atcttacatgatattatttatctttatgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagg 18659300  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  18659301 gacggagggagta 18659313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 29728210 - 29728098
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||| ||| ||||||||||||||||||||||||||| | |||||||||||||    
T  29728210 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaaatatctcaagtcaataatgtatattgtcaactagatcatttattaagg 29728111  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  29728110 gacggagggagta 29728098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 45 - 165
Target Start/End: Complemental strand, 48706958 - 48706838
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| || ||||| ||||||||||||||||| ||||||||||||| | |||||||||||||    
T  48706958 atcttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaaatatgtcaagtcaataatatatattgtcaactggatcatttattaagg 48706859  T
Q  145 gatggagggagtaatgtttat 165  Q
    || |||||||||| |||||||    
T  48706858 gacggagggagtattgtttat 48706838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 52668598 - 52668486
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| ||| |||||||||||    
T  52668598 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtgatttattaagg 52668499  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  52668498 gacggagggagta 52668486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 37833049 - 37833161
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||    
T  37833049 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgttaactaggtcatttattaagg 37833148  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  37833149 gacggagggagta 37833161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 1327461 - 1327562
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||| ||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  1327461 atcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagg 1327560  T
Q  145 ga 146  Q
    ||    
T  1327561 ga 1327562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 32285288 - 32285176
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| || ||||||||||||||||||||||||||||||||||||| || ||| ||||||||    
T  32285288 atcttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaagtatgtcaagtcaataatgtatattgtcaactaggccatctattaagg 32285189  T
Q  145 gatggagggagta 157  Q
     | ||| ||||||    
T  32285188 aacggatggagta 32285176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 39 - 154
Target Start/End: Original strand, 47638198 - 47638313
Alignment:
Q  39 aataatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcattta 138  Q
    ||||| |||| | |||||||||||||||||||||||||| || |||||| ||||||||||||||||| |||||||||||||||||||| | |||||| ||    
T  47638198 aataacatctcatatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgtcaattaggtcatcta 47638297  T
Q  139 ttaagggatggaggga 154  Q
    |||||||| |||||||    
T  47638298 ttaagggacggaggga 47638313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 43138000 - 43138098
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaag 143  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| ||||||||||||  |||||||||||||    
T  43138000 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaagtcatttattaag 43138098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 17053013 - 17053125
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| | || |||||||||||||||||||||| ||||||||||| |||    
T  17053013 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaaatcaataatgtatattgtcaactgggtcatttattgagg 17053112  T
Q  145 gatggagggagta 157  Q
    || |||| |||||    
T  17053113 gacggagagagta 17053125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 32951248 - 32951136
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| |||||||||||||||||||||||||| || |||| | |||||||||||| | ||||||||||||||||||||||||| | ||||||||| |||    
T  32951248 atcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactagatcatttattgagg 32951149  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  32951148 gacggagggagta 32951136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 55 - 159
Target Start/End: Original strand, 53066529 - 53066633
Alignment:
Q  55 atattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagggatggaggga 154  Q
    ||||||||||||||||||||||| || |||||| || ||||||||||||||||||||||| ||||||||||||| | |||| |||||||||| |||||||    
T  53066529 atattatttatctttgtgaattagtagaaaagtatgatcaaagtatgtcaagtcaataatatatattgtcaactagatcatctattaagggacggaggga 53066628  T
Q  155 gtaat 159  Q
    |||||    
T  53066629 gtaat 53066633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 62 - 157
Target Start/End: Original strand, 34827419 - 34827514
Alignment:
Q  62 ttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagggatggagggagta 157  Q
    |||||||||| ||||| ||||||||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||    
T  34827419 ttatctttgtaaattagtataaaagtatggtgaaagtatgtcaagtcaataatatatattgtcaactaggtcatttattaagggacggagggagta 34827514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 48 - 146
Target Start/End: Original strand, 38492203 - 38492301
Alignment:
Q  48 ttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaaggga 146  Q
    |||||||||||||||||||||||| ||||| || |||| | |||||||||||||| || |||||||||||||||||||||| |||||||||||||||||    
T  38492203 ttacatgatattatttatctttgtaaattagtagaaaaatatggtcaaagtatgttaaatcaataatgtatattgtcaactaggtcatttattaaggga 38492301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 25097299 - 25097198
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||  |||||||||||||| |  ||||| ||||||||    
T  25097299 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaaatatgtatattgtcaattaagtcatctattaagg 25097200  T
Q  145 ga 146  Q
    ||    
T  25097199 ga 25097198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 42 - 153
Target Start/End: Original strand, 36665164 - 36665275
Alignment:
Q  42 aatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttatta 141  Q
    ||||||||||||| |||||||||||||||||||||| || |||| | | |||||||||||| |||| |||||||||||||||||| | |||||| |||||    
T  36665164 aatatcttacatggtattatttatctttgtgaattagtagaaaaatatagtcaaagtatgttaagttaataatgtatattgtcaaataggtcatctatta 36665263  T
Q  142 agggatggaggg 153  Q
    ||||| ||||||    
T  36665264 agggacggaggg 36665275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 45 - 159
Target Start/End: Original strand, 49058005 - 49058119
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | || |||||||| |||||||||||||| |||||||||||   |||||| |||| |||    
T  49058005 atcttacatgatattatttatctttgtgaattagtagaaaaatatgatcaaagtacgtcaagtcaataatatatattgtcaaagaggtcatctatttagg 49058104  T
Q  145 gatggagggagtaat 159  Q
    || ||||||||||||    
T  49058105 gacggagggagtaat 49058119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 46483699 - 46483809
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||| ||||||||||||||||||||||| || |||||| ||||||  ||||||||| |||||||||||||||||||||| | |||| ||||||||    
T  46483699 atcttacataatattatttatctttgtgaattagtagaaaagtatggtca--gtatgtcaaatcaataatgtatattgtcaactagatcatctattaagg 46483796  T
Q  145 gatggagggagta 157  Q
    ||  |||||||||    
T  46483797 gacagagggagta 46483809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 56 - 157
Target Start/End: Complemental strand, 4238595 - 4238494
Alignment:
Q  56 tattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagggatggagggag 155  Q
    |||||||||||||||||||||| |  |||| | |||||||||||| | |||| ||||||||||||||||||||  |||||||||| ||||| ||||||||    
T  4238595 tattatttatctttgtgaattagtggaaaaatatggtcaaagtatattaagttaataatgtatattgtcaactaagtcatttattgagggacggagggag 4238496  T
Q  156 ta 157  Q
    ||    
T  4238495 ta 4238494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 35717967 - 35717886
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    ||||||||| ||||||||||||||||||||||| || |||| | |||||||| ||||| |||||||||||||||||||||||    
T  35717967 atcttacataatattatttatctttgtgaattagtagaaaaatatggtcaaaatatgttaagtcaataatgtatattgtcaa 35717886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 3547533 - 3547420
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaag-tgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaag 143  Q
    ||||||||| |||||||||||| ||||||| || || ||||  | |||||||||||||| ||||||||||||||||||||||| | |||||| |||| ||    
T  3547533 atcttacattatattatttatcattgtgaaatagtaaaaaaaatatggtcaaagtatgttaagtcaataatgtatattgtcaaataggtcatctattgag 3547434  T
Q  144 ggatggagggagta 157  Q
    ||| | ||||||||    
T  3547433 ggacgaagggagta 3547420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 48143912 - 48144013
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||| ||||| || |||| | |||||||| ||| | | ||||||||| ||||||||||| | ||||||||||| |||    
T  48143912 atcttacatgatattatttatctttgtaaattagtagaaaaatatggtcaaaatatattatgtcaataatatatattgtcaaataggtcatttattgagg 48144011  T
Q  145 ga 146  Q
    ||    
T  48144012 ga 48144013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 54673927 - 54674039
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| |||||||||||||||||||| ||||| || |||| | || |||||||| ||||| |||||||| |||||||||||   | ||||||||| |||    
T  54673927 atcttatatgatattatttatctttgttaattagtagaaaaatatgatcaaagtacgtcaaatcaataatatatattgtcaaacagatcatttatttagg 54674026  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  54674027 gacggagggagta 54674039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 7671425 - 7671313
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||| |||||| |||| | | ||||||  |||| ||||||||| ||| | ||||||| | |||||| | |||||     
T  7671425 atcttacatgatattatttatctttgtgagttaatagaaaaatattgtcaaaacatgttaagtcaatattgttttttgtcaaataggtcatctcttaaga 7671326  T
Q  145 gatggagggagta 157  Q
    || | ||||||||    
T  7671325 gacgaagggagta 7671313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 157
Target Start/End: Original strand, 10435329 - 10435380
Alignment:
Q  106 gtcaataatgtatattgtcaacttggtcatttattaagggatggagggagta 157  Q
    ||||||||||||||||||||||| ||||||||||| ||||| ||||||||||    
T  10435329 gtcaataatgtatattgtcaactaggtcatttattgagggacggagggagta 10435380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 27849100 - 27849150
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaa 95  Q
    ||||||||||||||||||||||||||| |||||||| |||||| |||||||    
T  27849100 atcttacatgatattatttatctttgttaattaatagaaaagtatggtcaa 27849150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 27849146 - 27849199
Alignment:
Q  106 gtcaataatgtatattgtcaacttggtcatttattaagggatggagggagtaat 159  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||| ||||||||    
T  27849146 gtcaataatgtatattgtcaactaggtcatctattaagggacggaaggagtaat 27849199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 15503172 - 15503255
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 128  Q
    ||||||||| ||||||||| ||||| | ||||| || |||| |  | ||||||||| | |||||||||||||||||| ||||||    
T  15503172 atcttacataatattatttttctttttaaattagtagaaaaataagatcaaagtatattaagtcaataatgtatattatcaact 15503255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 3086287 - 3086345
Alignment:
Q  42 aatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtat 100  Q
    ||||||||| ||||||||||||||||||||  |||| || |||| | ||||||||||||    
T  3086287 aatatcttatatgatattatttatctttgtatattagtaaaaaaatatggtcaaagtat 3086345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 159
Target Start/End: Complemental strand, 9484708 - 9484594
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || | ||||| | || | ||| ||||   |||||||||||  ||    
T  9484708 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 9484609  T
Q  145 gatggagggagtaat 159  Q
    || ||||||||||||    
T  9484608 gacggagggagtaat 9484594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 10435283 - 10435333
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaa 95  Q
    ||||||||| ||||||||||||||||||||||| || |||| | |||||||    
T  10435283 atcttacataatattatttatctttgtgaattagtagaaaaatatggtcaa 10435333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 159
Target Start/End: Original strand, 29793325 - 29793439
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || | ||||| | || | ||| ||||   |||||||||||  ||    
T  29793325 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 29793424  T
Q  145 gatggagggagtaat 159  Q
    || ||||||||||||    
T  29793425 gacggagggagtaat 29793439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 159
Target Start/End: Complemental strand, 34555263 - 34555149
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || | ||||| |||| | ||| ||||   ||||| |||||  ||    
T  34555263 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaaatgcacattttcaaacaggtcacttattgcgg 34555164  T
Q  145 gatggagggagtaat 159  Q
    || ||||||||||||    
T  34555163 gacggagggagtaat 34555149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 45093864 - 45093935
Alignment:
Q  39 aataatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaata 112  Q
    ||||||||||||||||  |||||||||| |||||||||| || |||| | || ||||| ||||| |||||||||    
T  45093864 aataatatcttacatg--attatttatcgttgtgaattagtagaaaaatatgatcaaaatatgttaagtcaata 45093935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 158
Target Start/End: Original strand, 42098574 - 42098687
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || | ||||| | || | ||| ||||   |||||||||||  ||    
T  42098574 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 42098673  T
Q  145 gatggagggagtaa 158  Q
    || |||||||||||    
T  42098674 gacggagggagtaa 42098687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 50673789 - 50673724
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaa 110  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || |||||||    
T  50673789 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaagtcaa 50673724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 29455655 - 29455767
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || | ||||| | || | ||| ||||   ||||||||||||  |    
T  29455655 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacag 29455754  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  29455755 gacggagggagta 29455767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 128
Target Start/End: Complemental strand, 39099068 - 39098992
Alignment:
Q  52 atgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 128  Q
    ||||||||||||||||||||  ||||||| |||| | | |||||||| | |||| ||||||||| | ||| ||||||    
T  39099068 atgatattatttatctttgtatattaatagaaaaatatagtcaaagtttatcaattcaataatggacattttcaact 39098992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 49076373 - 49076485
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || | ||||| | || | ||| ||||   |||||||||||  ||    
T  49076373 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 49076472  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  49076473 gacggagggagta 49076485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 6e-49; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 47 - 157
Target Start/End: Original strand, 38458881 - 38458991
Alignment:
Q  47 cttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaaggga 146  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  38458881 cttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaaggga 38458980  T
Q  147 tggagggagta 157  Q
    |||||||||||    
T  38458981 tggagggagta 38458991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 32988461 - 32988349
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||    
T  32988461 atcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaaatatgtcaagtcaataatgtatattgtcaactggatcatttattaagg 32988362  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  32988361 gacggagggagta 32988349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 25531927 - 25532039
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  25531927 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgtatattgtcaactaggtcatttattaagg 25532026  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  25532027 gacggagggagta 25532039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 50539409 - 50539521
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||    
T  50539409 atcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaattatgtatattgtcaactgagtcatttattaagg 50539508  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  50539509 gacggagggagta 50539521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 45 - 159
Target Start/End: Complemental strand, 30529162 - 30529048
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||    
T  30529162 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaattatctcaagtcaataatgtatattgtcaactaggtcatttattaagg 30529063  T
Q  145 gatggagggagtaat 159  Q
    || ||||||||||||    
T  30529062 gacggagggagtaat 30529048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 49805364 - 49805251
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  49805364 atcttacatgatattatttatctttgtgaattagtattaaaatgtggtcaaagtatgtcaagtcaacaatgtatattgtcaactgggtcatttattaagg 49805265  T
Q  145 gatggagggagtaa 158  Q
     | |||||||||||    
T  49805264 aacggagggagtaa 49805251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 45 - 158
Target Start/End: Original strand, 50876513 - 50876626
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  50876513 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagg 50876612  T
Q  145 gatggagggagtaa 158  Q
    || |||||||||||    
T  50876613 gacggagggagtaa 50876626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 1849849 - 1849962
Alignment:
Q  45 atcttacatgata-ttatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaag 143  Q
    ||||||||||||| |||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1849849 atcttacatgatacttatttatttttgtgaattagtagaaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaag 1849948  T
Q  144 ggatggagggagta 157  Q
    ||| ||| ||||||    
T  1849949 ggacggatggagta 1849962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 37281241 - 37281353
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||| ||||||||||||| | |||| ||||||||    
T  37281241 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatatatattgtcaactagatcatctattaagg 37281340  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  37281341 gacggagggagta 37281353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 42708649 - 42708761
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  42708649 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagg 42708748  T
Q  145 gatggagggagta 157  Q
    || ||| ||||||    
T  42708749 gacggatggagta 42708761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 45 - 159
Target Start/End: Original strand, 29161992 - 29162106
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| || ||||||||| ||||||||||||||||||||||||||| | || ||||||||||    
T  29161992 atcttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaagtatctcaagtcaataatgtatattgtcaactagatcgtttattaagg 29162091  T
Q  145 gatggagggagtaat 159  Q
    || ||||||||||||    
T  29162092 gacggagggagtaat 29162106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 16265182 - 16265294
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| | ||||||||||||||||||||||||| ||||||||||| |||    
T  16265182 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagg 16265281  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  16265282 gacggagggagta 16265294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 16266311 - 16266423
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| | ||||||||||||||||||||||||| ||||||||||| |||    
T  16266311 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagg 16266410  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  16266411 gacggagggagta 16266423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 39354376 - 39354264
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||| ||| |||||||||||||| ||| |||||||| |||||||||||||||    
T  39354376 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaaatatatcaagtcaataatgcatactgtcaactaggtcatttattaagg 39354277  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  39354276 gacggagggagta 39354264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 48264923 - 48264811
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||| ||||||| || |||||| |||||||||||| |||| ||||||||| |||||||||||| |||||||||||||||    
T  48264923 atcttacatgatattatttatctttctgaattagtagaaaagtatggtcaaagtatatcaactcaataatgcatattgtcaactaggtcatttattaagg 48264824  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  48264823 gacggagggagta 48264811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 52379138 - 52379250
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||| ||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| ||||||||||||| |    
T  52379138 atcttacatgatattatttatctttatgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaaag 52379237  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  52379238 gacggagggagta 52379250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 42 - 157
Target Start/End: Original strand, 4605145 - 4605260
Alignment:
Q  42 aatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttatta 141  Q
    |||||||||||||||||||||||||||||||||||||||  ||| | ||| |||||||||| ||||||||||||||||||||||| | |||||| |||||    
T  4605145 aatatcttacatgatattatttatctttgtgaattaataggaaaatatggccaaagtatgtaaagtcaataatgtatattgtcaaataggtcatctatta 4605244  T
Q  142 agggatggagggagta 157  Q
    ||||| ||||||||||    
T  4605245 agggacggagggagta 4605260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 45 - 155
Target Start/End: Complemental strand, 48219754 - 48219644
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| ||||||| |||| |||||||||||||| |||||||||||| |||||||||||||||    
T  48219754 atcttacatgatattatttatctttgtgaattactagaaaagtatggtcaacgtatatcaagtcaataatgcatattgtcaactaggtcatttattaagg 48219655  T
Q  145 gatggagggag 155  Q
    || ||| ||||    
T  48219654 gacggaaggag 48219644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 3898683 - 3898571
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||| ||||||||||||||||||||||| || |||| | |||||||||||| | ||||||||||||||||||||||||| ||||||||||| |||    
T  3898683 atcttacataatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagg 3898584  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  3898583 gacggagggagta 3898571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 26441783 - 26441895
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| |||||||||||||||||||||||||| || |||| | |||||||||||| | ||||||||||||||||||||||||| ||||||||||| |||    
T  26441783 atcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagg 26441882  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  26441883 gacggagggagta 26441895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 23569786 - 23569674
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | ||||||||||| |||||||||||||| |||||||||||   ||||||||||| |||    
T  23569786 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtacgtcaagtcaataatatatattgtcaaacaggtcatttatttagg 23569687  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  23569686 gacggagggagta 23569674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 24982500 - 24982612
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| | ||||||||||| ||||||||||||  ||||||||||| |||    
T  24982500 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatatatattgtcaacaaggtcatttattgagg 24982599  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  24982600 gacggagggagta 24982612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 43680219 - 43680331
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| | |||||||||||||||||||||||| || |||| | |||||||||||| | ||||||||||||||||||||||||| ||||||||||| |||    
T  43680219 atcttataagatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagg 43680318  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  43680319 gacggagggagta 43680331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 157
Target Start/End: Complemental strand, 45234951 - 45234849
Alignment:
Q  55 atattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagggatggaggga 154  Q
    |||||| |||||||||| |||||||| |||||| || |||||||||||||| | |||||||||||||||||||| |||||||||||||| || |||||||    
T  45234951 atattacttatctttgtaaattaataaaaaagtatgatcaaagtatgtcaaattaataatgtatattgtcaactaggtcatttattaagagacggaggga 45234852  T
Q  155 gta 157  Q
    |||    
T  45234851 gta 45234849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 16751563 - 16751470
Alignment:
Q  47 cttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttatt 140  Q
    ||||||||||||||||||||||||||||||| || |||| | |||||||| ||||| ||||||||||||||||||||||||| |||||| ||||    
T  16751563 cttacatgatattatttatctttgtgaattagtaaaaaaatatggtcaaaatatgttaagtcaataatgtatattgtcaactaggtcatgtatt 16751470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 47222358 - 47222459
Alignment:
Q  39 aataatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcattta 138  Q
    ||||| |||||| |||||||||||||||||||||||||| || |||| | |||||||||||||| |||||||||||||||||| |||| | |||||||||    
T  47222358 aataacatcttaaatgatattatttatctttgtgaattagtaaaaaaatatggtcaaagtatgttaagtcaataatgtatattatcaaataggtcattta 47222457  T
Q  139 tt 140  Q
    ||    
T  47222458 tt 47222459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 41501719 - 41501607
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||| | ||||||||| ||  || || || |||||||||||||| ||||||||||||||||| |||| |||||| ||| ||||    
T  41501719 atcttacatgatattatttatttgtgtgaattagtaggaatgtatgatcaaagtatgtcaattcaataatgtatattgtgaactaggtcatctatcaagg 41501620  T
Q  145 gatggagggagta 157  Q
    ||| |||||||||    
T  41501619 gattgagggagta 41501607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 3529325 - 3529406
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    ||||||||||||||||||||||||| ||||||| || |||| | |||||||||||||| ||||||||||| |||||||||||    
T  3529325 atcttacatgatattatttatctttatgaattagtagaaaaatatggtcaaagtatgttaagtcaataatatatattgtcaa 3529406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 14075883 - 14075977
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttatt 140  Q
    ||||||||| ||||||||||| ||||||||||| || |||| | |||| ||| ||||| ||||||||||||||||||||||||| |||||| ||||    
T  14075883 atcttacat-atattatttatatttgtgaattagtagaaaaatatggttaaaatatgttaagtcaataatgtatattgtcaactaggtcatgtatt 14075977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 21034637 - 21034560
Alignment:
Q  49 tacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    ||||||||||||||||||||||||| ||| || |||| | |  ||||||||||| |||||||||||||||||||||||    
T  21034637 tacatgatattatttatctttgtgatttagtagaaaaatataatcaaagtatgttaagtcaataatgtatattgtcaa 21034560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 50481425 - 50481537
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||||||| ||||||||| |||||||||||| || ||||   | |||||||||||| | ||||||||||||||||||||| | || ||| |||| |||    
T  50481425 atcttacatggtattatttacctttgtgaattagtagaaaaaaattgtcaaagtatgttaggtcaataatgtatattgtcaaataggccatctattgagg 50481524  T
Q  145 gatggagggagta 157  Q
    || | ||||||||    
T  50481525 gacgtagggagta 50481537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 161
Target Start/End: Complemental strand, 45299430 - 45299314
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| ||||||| | ||||||||||| || | ||||| | || | ||| ||||   |||||||||||  ||    
T  45299430 atcttatatgatattatttatctttgtatattagtataaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 45299331  T
Q  145 gatggagggagtaatgt 161  Q
    || ||||||||||||||    
T  45299330 gacggagggagtaatgt 45299314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 48376297 - 48376375
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    ||||||||||||||||| |||||||||||||   || ||||   || ||||||||| | |||||||||||||||||||||||    
T  48376297 atcttacatgatattatctatctttgtgaat---tagaaaaacatgttcaaagtatcttaagtcaataatgtatattgtcaa 48376375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 31971499 - 31971418
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    |||||| |||||||||||||||||||| ||||| || |||| | || ||||| ||||| || | |||||| |||||||||||    
T  31971499 atcttatatgatattatttatctttgttaattagtagaaaaatatgatcaaaatatgttaaattaataatatatattgtcaa 31971418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 120
Target Start/End: Original strand, 23330601 - 23330677
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagt-atgtcaagtcaataatgtatat 120  Q
    ||||||||||||||||||||| |||||||||||  ||||||   | |||||||| |||| ||||||||| |||||||    
T  23330601 atcttacatgatattatttatgtttgtgaattagcataaaaacattgtcaaagtaatgttaagtcaatattgtatat 23330677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 77
Target Start/End: Original strand, 32565895 - 32565927
Alignment:
Q  45 atcttacatgatattatttatctttgtgaatta 77  Q
    |||||||||||||||||||||||||||||||||    
T  32565895 atcttacatgatattatttatctttgtgaatta 32565927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 115
Target Start/End: Complemental strand, 27990827 - 27990757
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatg 115  Q
    |||||||||||| |||||||| |||||  |||| || |||| | |||||||||||||| | ||||||||||    
T  27990827 atcttacatgatgttatttatttttgtatattagtagaaaaatatggtcaaagtatgttaggtcaataatg 27990757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 151
Target Start/End: Complemental strand, 32968225 - 32968119
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| ||||||| |   |||||| |||||||  |||| | |||||||||||||   |||||| || |||||    
T  32968225 atcttatatgatattatttatctttgtatattagtataaaaatacagtcaaaatatgtcagttcaaaattgtatattgtcaaacaggtcatctaataagg 32968126  T
Q  145 gatggag 151  Q
    || ||||    
T  32968125 gacggag 32968119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 157
Target Start/End: Original strand, 41855675 - 41855789
Alignment:
Q  43 atatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaa 142  Q
    |||||||| |||||||||||||||| |||  |||| || |||| | ||||||||||| |  | ||||| | || | ||| |||| | ||||||||||||     
T  41855675 atatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaagtaagctaggtcaaaattgcaaattttcaaataggtcatttattac 41855774  T
Q  143 gggatggagggagta 157  Q
    |||| ||||||||||    
T  41855775 gggacggagggagta 41855789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 50295892 - 50295973
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    |||||| ||||||||||||||||||||  ||||  | |||| | ||| |||||||||||| ||||| |||| | ||||||||    
T  50295892 atcttatatgatattatttatctttgtatattagcagaaaaatatgggcaaagtatgtcaggtcaaaaatgcaaattgtcaa 50295973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 38737933 - 38737869
Alignment:
Q  56 tattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatat 120  Q
    |||||||||||||||||||||| || |||| | || | ||||||||| || |||||||| |||||    
T  38737933 tattatttatctttgtgaattagtagaaaaatatgattaaagtatgttaaatcaataatatatat 38737869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 3e-48; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 3293213 - 3293100
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3293213 atcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagg 3293114  T
Q  145 gatggagggagtaa 158  Q
    || |||||||||||    
T  3293113 gacggagggagtaa 3293100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 37710048 - 37710160
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  37710048 atcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgagtcatttattaagg 37710147  T
Q  145 gatggagggagta 157  Q
    || ||| ||||||    
T  37710148 gacggatggagta 37710160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 45 - 155
Target Start/End: Original strand, 38845756 - 38845866
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  38845756 atcttacatgatattatttatctttgtgaattagtataaaaatgtggtcaaagtatgtcaagtcaacaatgtatattgtcaactgggtcatttattaagg 38845855  T
Q  145 gatggagggag 155  Q
    || ||||||||    
T  38845856 gacggagggag 38845866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 8350992 - 8350880
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||| | |||||||| |||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8350992 atcttacatgatattatttatctttctaaattaatagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatttattaagg 8350893  T
Q  145 gatggagggagta 157  Q
    |||||||||||||    
T  8350892 gatggagggagta 8350880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 30380679 - 30380791
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  30380679 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagg 30380778  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  30380779 gacggagggagta 30380791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 45 - 159
Target Start/End: Original strand, 23249001 - 23249115
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  23249001 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagg 23249100  T
Q  145 gatggagggagtaat 159  Q
    || ||||||||||||    
T  23249101 gacggagggagtaat 23249115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 45 - 154
Target Start/End: Original strand, 40013800 - 40013909
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||| |||||    
T  40013800 atcttacatgatattatttatatttgtgaattaatataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgagtcatttactaagg 40013899  T
Q  145 gatggaggga 154  Q
    || |||||||    
T  40013900 gacggaggga 40013909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 30290073 - 30290185
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  30290073 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagg 30290172  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  30290173 gacggagggagta 30290185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 38739806 - 38739918
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||  |    
T  38739806 atcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaaatcaataatatatattgtcaactgggtcatttattaccg 38739905  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  38739906 gacggagggagta 38739918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 43066275 - 43066387
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||    
T  43066275 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgtatattgtcgactaggtcatttattaagg 43066374  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  43066375 gacggagggagta 43066387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 29791091 - 29791203
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  29791091 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagg 29791190  T
Q  145 gatggagggagta 157  Q
    || | ||||||||    
T  29791191 gacgtagggagta 29791203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 45 - 159
Target Start/End: Original strand, 2986474 - 2986588
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||||||||||||||| |||||||| ||||| || |||||| |||||||| |||||||||||||||||||||||||||||||  ||||||||||||||    
T  2986474 atcttacatgatattattaatctttgtaaattagtagaaaagtatggtcaaaatatgtcaagtcaataatgtatattgtcaactaagtcatttattaagg 2986573  T
Q  145 gatggagggagtaat 159  Q
    || ||||||||||||    
T  2986574 gacggagggagtaat 2986588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 2805588 - 2805476
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||| ||||||||||||| || |||||| |||||||||||| |||||||||| ||| |||||||||||| |||||||||||||||    
T  2805588 atcttacatgatattatttttctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaatgatgcatattgtcaactaggtcatttattaagg 2805489  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  2805488 gacggagggagta 2805476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 6470994 - 6471106
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||| ||||||| || |||||| || ||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  6470994 atcttacatgatattatttatctttatgaattagtagaaaagtatgatcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattaagg 6471093  T
Q  145 gatggagggagta 157  Q
    ||  |||||||||    
T  6471094 gacagagggagta 6471106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 45081961 - 45082073
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| ||||| |||||| |||| ||||||||| |||||||||||| |||||||||||||||    
T  45081961 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcgaagtatatcaaatcaataatgcatattgtcaactaggtcatttattaagg 45082060  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  45082061 gacggagggagta 45082073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 13138244 - 13138131
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||| |||||||||||||||||||||||| |||||| |||||| |||||| |    
T  13138244 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaaatatgtcaagtcaataatgtatattatcaactaggtcatctattaaag 13138145  T
Q  145 gatggagggagtaa 158  Q
    || |||||||||||    
T  13138144 gacggagggagtaa 13138131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 45 - 158
Target Start/End: Original strand, 14522529 - 14522641
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||| ||||||||||| ||||| || |||||| |||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  14522529 atcttacatgatattttttatctttgt-aattagtagaaaagtatggtcaaagtatatcaagtcaataatgtatattgtcaactaggtcatctattaagg 14522627  T
Q  145 gatggagggagtaa 158  Q
    || |||||||||||    
T  14522628 gacggagggagtaa 14522641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 18809425 - 18809537
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| |||||||||||||||||||||||||| || |||| | |||||||||||| | ||||||||||||||||||||||||| ||||||||||| |||    
T  18809425 atcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagg 18809524  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  18809525 gacggagggagta 18809537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 39361274 - 39361375
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||||||||||| |||||| || ||||||||| |||| ||||||||| |||||||||||| |||||||||||||||    
T  39361274 atcttatatgatattatttatctttgtgaattaatagaaaagtatgatcaaagtatatcaaatcaataatgcatattgtcaactaggtcatttattaagg 39361373  T
Q  145 ga 146  Q
    ||    
T  39361374 ga 39361375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 31127917 - 31127805
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | || ||||||||| | ||||||||||| ||||||||||||| ||||||||||| |||    
T  31127917 atcttacatgatattatttatctttgtgaattagtagaaaaatatgatcaaagtatattaagtcaataatatatattgtcaactaggtcatttattgagg 31127818  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  31127817 gacggagggagta 31127805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 45253895 - 45253990
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttatt 140  Q
    ||||||||||||||||||| ||||||||||||| || |||| | |||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  45253895 atcttacatgatattatttttctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatctatt 45253990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 1580877 - 1580768
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||| ||||| || |||||| ||||||||||||||||| |||||||||||||||||   || |||||||||||||||    
T  1580877 atcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaactcaataatgtatattgt---ctaggtcatttattaagg 1580781  T
Q  145 gatggagggagta 157  Q
     | ||||||||||    
T  1580780 aacggagggagta 1580768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 12893677 - 12893789
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||| |||| ||| |||| | |||||||||||||| |||||||||||| |||||||||| | ||||||||| | |||    
T  12893677 atcttacatgatattatttatctttgtaaattgatagaaaaatatggtcaaagtatgttaagtcaataatgcatattgtcaaataggtcatttactgagg 12893776  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  12893777 gacggagggagta 12893789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 6470726 - 6470625
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||| ||||||| || |||||| | |||||| ||| |||| |||||||||||||||||||||| |||||| ||||||||    
T  6470726 atcttacatgatattatttatctttatgaattagtagaaaagtatcgtcaaaatatctcaaatcaataatgtatattgtcaactaggtcatctattaagg 6470627  T
Q  145 ga 146  Q
    ||    
T  6470626 ga 6470625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 886181 - 886100
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||||||||| |||| ||||||||||||||||||    
T  886181 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagttaataatgtatattgtcaa 886100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 44123819 - 44123914
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttatt 140  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||| ||||||||| ||||||| ||||||||||||||| | |||||| ||||    
T  44123819 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtgaaagtatgttaagtcaacaatgtatattgtcaaataggtcatctatt 44123914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 45 - 135
Target Start/End: Complemental strand, 23764561 - 23764471
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    ||||||||||||||||||| |||||||||||||||| |||| | || ||||| ||| |||| | |||||||||||||||||||| ||||||    
T  23764561 atcttacatgatattatttttctttgtgaattaatagaaaaatatgatcaaaatatatcaaattaataatgtatattgtcaactaggtcat 23764471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 10658126 - 10658207
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    ||||||||| ||||||||||| ||||| ||||| || |||| | |||||||||||||| |||||||||||||||||||||||    
T  10658126 atcttacataatattatttatatttgttaattagtagaaaaatatggtcaaagtatgttaagtcaataatgtatattgtcaa 10658207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 121
Target Start/End: Original strand, 14847355 - 14847434
Alignment:
Q  42 aatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatatt 121  Q
    ||||||||| || ||||||||||||||||||||||| || |||| | |||||||||||||| |||| |||||||||||||    
T  14847355 aatatcttaaataatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtaaagttaataatgtatatt 14847434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 20167689 - 20167608
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    ||||||||||||||||||||| ||||||||||| || |||| | |  ||||| ||||| ||||||||| |||||||||||||    
T  20167689 atcttacatgatattatttatttttgtgaattagtagaaaaatattatcaaaatatgttaagtcaatagtgtatattgtcaa 20167608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 25256482 - 25256551
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataat 114  Q
    ||||||||||||||||||||||||||| ||||| || |||| | || ||||||||||| |||||||||||    
T  25256482 atcttacatgatattatttatctttgtaaattagtagaaaaatatgatcaaagtatgttaagtcaataat 25256551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 157
Target Start/End: Original strand, 3383563 - 3383669
Alignment:
Q  51 catgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagggatgga 150  Q
    ||||||||||||||||||||||||||| |  |||| | || ||| ||||| | ||||||||||| ||||||||||| |   |||| |||||||||| |||    
T  3383563 catgatattatttatctttgtgaattagtgaaaaaatatgatcacagtatattaagtcaataatatatattgtcaaatatatcatctattaagggacgga 3383662  T
Q  151 gggagta 157  Q
     ||||||    
T  3383663 aggagta 3383669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 42786047 - 42786128
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    |||||| ||||||||||||||||||||  ||||||| |||| | |||||||| | ||||||||||| | |||| ||||||||    
T  42786047 atcttatatgatattatttatctttgtatattaatagaaaaatatggtcaaaatgtgtcaagtcaaaactgtaaattgtcaa 42786128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 132
Target Start/End: Original strand, 35584120 - 35584210
Alignment:
Q  42 aatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggt 132  Q
    ||||||||| ||||||||||||||||||||  ||||||| |||| | || ||||| ||| | | |||||||||| | |||||||| |||||    
T  35584120 aatatcttatatgatattatttatctttgtatattaatagaaaaatatgatcaaaatatattaggtcaataatgcacattgtcaaattggt 35584210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 7431268 - 7431325
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgt 102  Q
    |||||| ||||||||||||||||||||  |||| || |||| |||||||||| |||||    
T  7431268 atcttatatgatattatttatctttgtatattagtagaaaaatgtggtcaaaatatgt 7431325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 7603419 - 7603354
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaa 110  Q
    |||||| ||||||||||||||||||||  |||| ||||||| |  ||||||| ||||||| |||||    
T  7603419 atcttatatgatattatttatctttgtatattagtataaaaatacggtcaaaatatgtcaggtcaa 7603354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 20671371 - 20671314
Alignment:
Q  42 aatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagta 99  Q
    ||||||||| ||||||||||||||||||||  |||| || |||| | |||||||||||    
T  20671371 aatatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 20671314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 9302465 - 9302425
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaa 85  Q
    ||||||||| ||||||||||||||||| |||||||| ||||    
T  9302465 atcttacataatattatttatctttgtaaattaatagaaaa 9302425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 77
Target Start/End: Original strand, 11854674 - 11854706
Alignment:
Q  45 atcttacatgatattatttatctttgtgaatta 77  Q
    |||||||| ||||||||||||||||||||||||    
T  11854674 atcttacaggatattatttatctttgtgaatta 11854706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 44887664 - 44887776
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | |||||||| || |||| ||||| | || | ||| |||| | | |||||||||  ||    
T  44887664 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaactaagtcaggtcaaaattgcacattttcaaatagatcatttattgcgg 44887763  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  44887764 gacggagggagta 44887776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 3e-48; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 5744195 - 5744082
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  5744195 atcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaaaaatgtatattgtcaactgggtcatttattaagg 5744096  T
Q  145 gatggagggagtaa 158  Q
    || |||||||||||    
T  5744095 gacggagggagtaa 5744082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 45 - 159
Target Start/End: Complemental strand, 46212462 - 46212348
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  46212462 atcttacatgatattatttatctttatgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgagtcatttattaagg 46212363  T
Q  145 gatggagggagtaat 159  Q
    |||||||||||||||    
T  46212362 gatggagggagtaat 46212348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 4264283 - 4264395
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  4264283 atcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaagtcatttattaagg 4264382  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  4264383 gacggagggagta 4264395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 7738931 - 7738819
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||| ||||| || |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7738931 atcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatttattaagg 7738832  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  7738831 gacggagggagta 7738819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 3442456 - 3442344
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  3442456 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagg 3442357  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  3442356 gacggagggagta 3442344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 47579435 - 47579547
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  47579435 atcttacatgatattatttatctttgtgaattagtaaaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagg 47579534  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  47579535 gacggagggagta 47579547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 45 - 159
Target Start/End: Complemental strand, 3443499 - 3443385
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||||||||||||| |||||||||| ||||| || |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3443499 atcttacatgatattacttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatttattaagg 3443400  T
Q  145 gatggagggagtaat 159  Q
    || |||| |||||||    
T  3443399 gagggagagagtaat 3443385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 45 - 159
Target Start/End: Complemental strand, 20678700 - 20678586
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  20678700 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagg 20678601  T
Q  145 gatggagggagtaat 159  Q
    || ||||| ||||||    
T  20678600 gacggaggaagtaat 20678586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 45 - 159
Target Start/End: Original strand, 28152140 - 28152254
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| || ||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  28152140 atcttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagg 28152239  T
Q  145 gatggagggagtaat 159  Q
    || ||||||||||||    
T  28152240 gacggagggagtaat 28152254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 4209508 - 4209620
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | ||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||    
T  4209508 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaaatcaataatgtatattgtcaactaggtcatctattaagg 4209607  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  4209608 gacggagggagta 4209620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 5735420 - 5735532
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||| ||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  5735420 atcttacatgatattatttatctttatgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagg 5735519  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  5735520 gacggagggagta 5735532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 26205816 - 26205704
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| ||||||||||||  ||||||||||||||    
T  26205816 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaagtcatttattaagg 26205717  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  26205716 gacggagggagta 26205704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 45 - 164
Target Start/End: Original strand, 1377181 - 1377299
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  1377181 atcttacatgatattatttatatttgtgaattagtataaaagtatg-tcaaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagg 1377279  T
Q  145 gatggagggagtaatgttta 164  Q
    ||  ||||||||||| ||||    
T  1377280 gacagagggagtaatattta 1377299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 56 - 157
Target Start/End: Original strand, 6494750 - 6494851
Alignment:
Q  56 tattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagggatggagggag 155  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||    
T  6494750 tattatttatctttgtgaattagtataaaagtatggtcaaagtatgttaagtcaataatgtatattgtcaactgggtcatttattaagggacggaaggag 6494849  T
Q  156 ta 157  Q
    ||    
T  6494850 ta 6494851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 49768594 - 49768695
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  49768594 atcttacatgatattatttatctttgtgaattagtaaaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagg 49768693  T
Q  145 ga 146  Q
    ||    
T  49768694 ga 49768695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 3901251 - 3901139
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| | |||||||||||||    
T  3901251 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactagatcatttattaagg 3901152  T
Q  145 gatggagggagta 157  Q
    || ||||| ||||    
T  3901151 gacggaggaagta 3901139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 18360085 - 18359973
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | |  ||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  18360085 atcttacatgatattatttatctttgtgaattagtagaaaaatataatcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattaagg 18359986  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  18359985 gacggagggagta 18359973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 36602843 - 36602955
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | |  ||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  36602843 atcttacatgatattatttatctttgtgaattagtagaaaaatataatcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattaagg 36602942  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  36602943 gacggagggagta 36602955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 39260244 - 39260132
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || ||||||  | ||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  39260244 atcttacatgatattatttatctttgtgaattagtagaaaagtaggatcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattaagg 39260145  T
Q  145 gatggagggagta 157  Q
    || ||||| ||||    
T  39260144 gacggaggaagta 39260132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 45198452 - 45198340
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| ||||||  | || ||||||||| | ||||||||||||||||||||||||| |||||||||||||||    
T  45198452 atcttacatgatattatttatctttgtgaattagtataaatttatgttcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattaagg 45198353  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  45198352 gacggagggagta 45198340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 46803781 - 46803893
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  46803781 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagg 46803880  T
Q  145 gatggagggagta 157  Q
    ||  |||||||||    
T  46803881 gacagagggagta 46803893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 45 - 152
Target Start/End: Complemental strand, 5123269 - 5123162
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||||||  |||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  5123269 atcttacatcttattatttatctttgtgaattagtaaaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattaagg 5123170  T
Q  145 gatggagg 152  Q
    || |||||    
T  5123169 gacggagg 5123162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 45 - 154
Target Start/End: Complemental strand, 19525826 - 19525717
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||||||||| |||||||| |||||||||||||||| ||||||||||| |||    
T  19525826 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtcaatgatgtatattgtcaactaggtcatttattgagg 19525727  T
Q  145 gatggaggga 154  Q
    || |||||||    
T  19525726 gacggaggga 19525717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 28166423 - 28166524
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  28166423 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagg 28166522  T
Q  145 ga 146  Q
    ||    
T  28166523 ga 28166524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 56 - 157
Target Start/End: Complemental strand, 55190667 - 55190566
Alignment:
Q  56 tattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagggatggagggag 155  Q
    |||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||    
T  55190667 tattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggttatctattaagggacggagggag 55190568  T
Q  156 ta 157  Q
    ||    
T  55190567 ta 55190566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 25644508 - 25644620
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| | ||||||||||||||||||||||||| ||||||||||| | |    
T  25644508 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgaag 25644607  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  25644608 gacggagggagta 25644620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 19170651 - 19170538
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | ||||||||||| |||||||||||||| |||||||||||   ||||||||||| |||    
T  19170651 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtacgtcaagtcaataatatatattgtcaaacaggtcatttatttagg 19170552  T
Q  145 gatggagggagtaa 158  Q
    || |||||||||||    
T  19170551 gacggagggagtaa 19170538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 6923052 - 6922940
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| | |||||||||||||||||| |||||| ||||||||||| |||    
T  6923052 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattatcaactaggtcatttattgagg 6922953  T
Q  145 gatggagggagta 157  Q
     | ||||||||||    
T  6922952 aacggagggagta 6922940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 37688145 - 37688033
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||| ||||||||  |||||||||||| | |||||||||||||    
T  37688145 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaaatcaataatacatattgtcaactagatcatttattaagg 37688046  T
Q  145 gatggagggagta 157  Q
     | ||||||||||    
T  37688045 aacggagggagta 37688033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 39786469 - 39786357
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||||||||||||||| | |||||||||||| ||||||||| ||||||||||||||||| |||||||| |||||||||||||  ||||| ||||||||    
T  39786469 atcttacatgatattattaaactttgtgaattagtataaaagtatggtcaaagtatgtcaaatcaataatatatattgtcaactaagtcatctattaagg 39786370  T
Q  145 gatggagggagta 157  Q
    || | ||||||||    
T  39786369 gacgaagggagta 39786357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 19652368 - 19652256
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||| ||||| ||||||| || |||| | | |||||||||||||||||||||||||||||||||||||| | |||| ||||||||    
T  19652368 atcttacatgatattatttttctttttgaattagtagaaaaatatagtcaaagtatgtcaagtcaataatgtatattgtcaactagatcatctattaagg 19652269  T
Q  145 gatggagggagta 157  Q
    || ||||| ||||    
T  19652268 gacggaggaagta 19652256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 163
Target Start/End: Complemental strand, 23603757 - 23603641
Alignment:
Q  47 cttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaaggga 146  Q
    ||||||||||||||||| ||||| ||||||| || |||| | || ||||||||||||||||||||||||||||||||||||| |||||| |||| ||| |    
T  23603757 cttacatgatattatttttctttttgaattagtagaaaaatatgttcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattgaggaa 23603658  T
Q  147 tggagggagtaatgttt 163  Q
     |||||||||| |||||    
T  23603657 cggagggagtagtgttt 23603641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 45 - 159
Target Start/End: Complemental strand, 21859031 - 21858917
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||  ||||| ||||||||| || |||||| |||||||||||| |||||||||||||  |||||||||||| | |||||||||||||    
T  21859031 atcttacatgatattaagtatctatgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataattcatattgtcaactagatcatttattaagg 21858932  T
Q  145 gatggagggagtaat 159  Q
    || ||| ||||||||    
T  21858931 gacggatggagtaat 21858917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 45 - 159
Target Start/End: Complemental strand, 21914894 - 21914780
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||  ||||| ||||||||| || |||||| |||||||||||| |||||||||||||  |||||||||||| | |||||||||||||    
T  21914894 atcttacatgatattaagtatctatgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataattcatattgtcaactagatcatttattaagg 21914795  T
Q  145 gatggagggagtaat 159  Q
    || ||| ||||||||    
T  21914794 gacggatggagtaat 21914780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 45 - 152
Target Start/End: Complemental strand, 19633961 - 19633854
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||| ||||| ||||||| || |||| | ||||||||||| |||||||||||||| ||||||||||||| |||||| |||| |||    
T  19633961 atcttacatgatattatttttctttttgaattagtagaaaaatatggtcaaagtaggtcaagtcaataatatatattgtcaactaggtcatctattgagg 19633862  T
Q  145 gatggagg 152  Q
    || |||||    
T  19633861 gacggagg 19633854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 50033169 - 50033264
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttatt 140  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||||||||| ||||||||||||||||| ||||| | |||||| ||||    
T  50033169 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtcaataatgtatatcgtcaaataggtcatctatt 50033264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 23256084 - 23256167
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 128  Q
    ||||||||| ||||||||||| ||||||||||| || |||||| ||||| ||||||||||| ||||||||||||||||||||||    
T  23256084 atcttacattatattatttatttttgtgaattagtagaaaagtatggtccaagtatgtcaaatcaataatgtatattgtcaact 23256167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 50035685 - 50035780
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttatt 140  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||| ||||||||| ||||||| ||||||||||||||| | |||||| ||||    
T  50035685 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtgaaagtatgttaagtcaacaatgtatattgtcaaataggtcatctatt 50035780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 51737066 - 51736985
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||| ||| | |||||||||||||||||||||||    
T  51737066 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaaatatattaagtcaataatgtatattgtcaa 51736985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 40250726 - 40250838
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| || ||||||||||| |||||  |||| ||||||| |  ||||||| |||||||||||||||||||||||||||||||  ||||| ||||| ||    
T  40250726 atcttatataatattatttatatttgtatattagtataaaaataaggtcaaactatgtcaagtcaataatgtatattgtcaactatgtcatctattatgg 40250825  T
Q  145 gatggagggagta 157  Q
    || ||| ||||||    
T  40250826 gacggaaggagta 40250838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 45 - 137
Target Start/End: Original strand, 19631457 - 19631550
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaata-taaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcattt 137  Q
    |||||||||||||||||||||||||||||||||  |  |||| | |||||||||||||| ||||| |||||||||||| |||| | ||||||||    
T  19631457 atcttacatgatattatttatctttgtgaattagcagaaaaaatatggtcaaagtatgttaagtctataatgtatattatcaaataggtcattt 19631550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 158
Target Start/End: Complemental strand, 47278390 - 47278276
Alignment:
Q  44 tatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaag 143  Q
    |||||||||| ||||||||||||||||||||||  || |||| | || ||||||||| | |||||||||||| ||||||| || |  ||||| | ||||     
T  47278390 tatcttacataatattatttatctttgtgaattgctagaaaaatatgatcaaagtatattaagtcaataatgcatattgttaaataagtcatctcttaaa 47278291  T
Q  144 ggatggagggagtaa 158  Q
    ||| |||||||||||    
T  47278290 ggacggagggagtaa 47278276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 39195602 - 39195521
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    |||||| ||||||||||||||||||||  |||| ||||||| | |||||||||||||||| ||||| | |||| ||||||||    
T  39195602 atcttatatgatattatttatctttgtatattagtataaaaatatggtcaaagtatgtcaggtcaaaactgtaaattgtcaa 39195521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 123
Target Start/End: Complemental strand, 19731267 - 19731200
Alignment:
Q  56 tattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgt 123  Q
    |||||||||||||| |||||||  |||||  | |||||||||||||| ||||||||||||||||||||    
T  19731267 tattatttatctttctgaattagcataaatatatggtcaaagtatgttaagtcaataatgtatattgt 19731200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 55997260 - 55997355
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttatt 140  Q
    ||||||||||||||||||||| ||||||||||| || |||| | ||||||||  || | ||||||||||| |||||| |||| | |||||| ||||    
T  55997260 atcttacatgatattatttatttttgtgaattagtagaaaaatatggtcaaaaaatattaagtcaataatatatattatcaaataggtcatctatt 55997355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 42187059 - 42187015
Alignment:
Q  98 tatgtcaagtcaataatgtatattgtcaacttggtcatttattaa 142  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||    
T  42187059 tatgtcaagtcaataatgtatattgtcaactaggtcatctattaa 42187015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 26660559 - 26660614
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtat 100  Q
    |||||||||||||||||||| |||| |||||||||| |||| | ||||||||||||    
T  26660559 atcttacatgatattatttacctttatgaattaatagaaaaatatggtcaaagtat 26660614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 39194061 - 39194151
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    ||||||||| ||| | |||||||||||| |||| || |||| |   |||||||||||| ||||||||| ||||||||||||| | ||||||    
T  39194061 atcttacattataatgtttatctttgtgtattagtagaaaaatacagtcaaagtatgttaagtcaatattgtatattgtcaaataggtcat 39194151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 87
Target Start/End: Original strand, 50971608 - 50971650
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagt 87  Q
    ||||||||||||||||||||||||||||||||| || ||||||    
T  50971608 atcttacatgatattatttatctttgtgaattagtagaaaagt 50971650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 142
Target Start/End: Original strand, 53568503 - 53568596
Alignment:
Q  48 ttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaa 142  Q
    |||||| ||||||||||||||||||||||| || |||| | |||||||| ||||| || |  |||||||||| ||||||||  ||||| ||||||    
T  53568503 ttacataatattatttatctttgtgaattagtagaaaaatatggtcaaaatatgttaa-tgtataatgtataatgtcaactgagtcatgtattaa 53568596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 37164128 - 37164029
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | | ||||||||| || | ||||| | |||||||| |||| | |||||| ||||||||    
T  37164128 atcttatatgatattatttatctttgtatattagtagaaaaatatagtcaaagtaagttaggtcaaaattgtatattttcaaatgggtcatctattaagg 37164029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 159
Target Start/End: Complemental strand, 31152773 - 31152659
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || | ||||| | || | ||| ||||   |||||||||||  ||    
T  31152773 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgtgg 31152674  T
Q  145 gatggagggagtaat 159  Q
    || ||||||||||||    
T  31152673 gacggagggagtaat 31152659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 35755284 - 35755214
Alignment:
Q  56 tattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    |||||||||||||| |  |||| ||||||| | || ||||| ||||||| |||||||||||| ||||||||    
T  35755284 tattatttatctttatatattagtataaaaatatgatcaaaatatgtcaggtcaataatgtaaattgtcaa 35755214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 46608325 - 46608271
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagta 99  Q
    |||||| ||||||||||||||||||||  |||| ||||||| | |||||||||||    
T  46608325 atcttatatgatattatttatctttgtatattagtataaaaatatggtcaaagta 46608271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 158
Target Start/End: Original strand, 8525367 - 8525480
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||| ||||  |||| || |||| | || |||||||| || | ||||| | || ||||| ||||   |||||||||||| ||    
T  8525367 atcttatatgatattatttatccttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattgcatattttcaaacaggtcatttattatgg 8525466  T
Q  145 gatggagggagtaa 158  Q
    || |||||||||||    
T  8525467 gacggagggagtaa 8525480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 10181150 - 10181231
Alignment:
Q  59 tatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttatt 140  Q
    |||||||||||||  |||| || |||| |||||||||| ||||| ||||||||| || | |||||||| | | |||||||||    
T  10181150 tatttatctttgtatattagtagaaaaatgtggtcaaaatatgttaagtcaatagtgcacattgtcaaatagatcatttatt 10181231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 35064171 - 35064232
Alignment:
Q  91 gtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagggatggagg 152  Q
    |||||||||||| |||| |||| | ||||||||||| | |||||| ||||| ||||||||||    
T  35064171 gtcaaagtatgttaagttaatattatatattgtcaaataggtcatctattatgggatggagg 35064232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 74
Target Start/End: Complemental strand, 42187091 - 42187062
Alignment:
Q  45 atcttacatgatattatttatctttgtgaa 74  Q
    ||||||||||||||||||||||||||||||    
T  42187091 atcttacatgatattatttatctttgtgaa 42187062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 126
Target Start/End: Complemental strand, 9965469 - 9965437
Alignment:
Q  94 aaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    ||||||||||| |||||||||||||||||||||    
T  9965469 aaagtatgtcaggtcaataatgtatattgtcaa 9965437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 3e-48; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 45 - 158
Target Start/End: Original strand, 27559724 - 27559837
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  27559724 atcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaaaaatgtatattgtcaactgggtcatttattaagg 27559823  T
Q  145 gatggagggagtaa 158  Q
    || |||||||||||    
T  27559824 gacggagggagtaa 27559837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 34827061 - 34827173
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  34827061 atcttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatatatattgtcaactgggtcatttattaagg 34827160  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  34827161 gacggagggagta 34827173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 45 - 158
Target Start/End: Original strand, 44330533 - 44330646
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  44330533 atcttacatgatattatttatctttgtgaattagtataaaagtgtggttaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttaataagg 44330632  T
Q  145 gatggagggagtaa 158  Q
    || |||||||||||    
T  44330633 gacggagggagtaa 44330646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 45 - 159
Target Start/End: Original strand, 42038672 - 42038786
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| |||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||   |||||||||||||    
T  42038672 atcttatatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgaatcatttattaagg 42038771  T
Q  145 gatggagggagtaat 159  Q
    || ||||||||||||    
T  42038772 gacggagggagtaat 42038786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 45 - 155
Target Start/End: Complemental strand, 44283391 - 44283281
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  44283391 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagg 44283292  T
Q  145 gatggagggag 155  Q
    || ||||||||    
T  44283291 gacggagggag 44283281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 7443003 - 7442891
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||| ||||||||||| ||||| || |||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  7443003 atcttacatgatattttttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactagatcatttattaagg 7442904  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  7442903 gacggagggagta 7442891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 18718388 - 18718500
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| || ||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  18718388 atcttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagg 18718487  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  18718488 gacggagggagta 18718500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 48 - 157
Target Start/End: Complemental strand, 4045342 - 4045233
Alignment:
Q  48 ttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagggat 147  Q
    |||||||||||||||||||||||| ||||| ||||||| |||||||||| ||||||||||||| ||||||||||||||| | |||||||||||||||||     
T  4045342 ttacatgatattatttatctttgtaaattagtataaaaatgtggtcaaaatatgtcaagtcaacaatgtatattgtcaaatgggtcatttattaagggac 4045243  T
Q  148 ggagggagta 157  Q
    ||||||||||    
T  4045242 ggagggagta 4045233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 9877195 - 9877083
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| |||||||||||||||||||||||||| || |||| | |||||||||||||||||||||||||||||||||||||| | |||||| ||||||||    
T  9877195 atcttatatgatattatttatctttgtgaattagtaaaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaattaggtcatctattaagg 9877096  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  9877095 gacggagggagta 9877083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 23671525 - 23671637
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| |||||||||||||||||||||||||| || |||||| ||||||||||||  ||||||||||||| |||||||||||| |||||||||||||||    
T  23671525 atcttatatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtataccaagtcaataatgcatattgtcaactaggtcatttattaagg 23671624  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  23671625 gacggagggagta 23671637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 40425361 - 40425249
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||||||||||||||||||||||| |||||| || |||||| |||||||||||| |||| ||||||||| |||||||||||| |||||||||||||||    
T  40425361 atcttacatgatattatttatctttgcgaattagtagaaaagtatggtcaaagtatatcaaatcaataatgcatattgtcaactaggtcatttattaagg 40425262  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  40425261 gacggagggagta 40425249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 45 - 158
Target Start/End: Original strand, 20517567 - 20517680
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| |||||||||||||| ||||||||||||  ||||||||||||||    
T  20517567 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgtcaactaagtcatttattaagg 20517666  T
Q  145 gatggagggagtaa 158  Q
     | |||||||||||    
T  20517667 aacggagggagtaa 20517680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 3987344 - 3987232
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| |||||| ||||||| ||||||||||||  ||||||||||||||    
T  3987344 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagttaataatgcatattgtcaactaagtcatttattaagg 3987245  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  3987244 gacggagggagta 3987232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 14372226 - 14372338
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||||||| |||||||||| ||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||| | |||||||||||||||    
T  14372226 atcttacatgttattatttatatttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaattaggtcatttattaagg 14372325  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  14372326 gacggagggagta 14372338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 14707646 - 14707535
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| || ||||||||  |||||||||||||| |||||||||||| |||||||||||||||    
T  14707646 atcttacatgatattatttatctttgtgaattagtagaaaagtatg-tcaaagtacatcaagtcaataatgcatattgtcaactaggtcatttattaagg 14707548  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  14707547 gacggagggagta 14707535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 39418132 - 39418020
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| ||| ||||||||||||||||||||||||||||||||||||||  |||||  ||||||     
T  39418132 atcttacatgatattatttatctttgtgaattagtagaaaaatgtagtcaaagtatgtcaagtcaataatgtatattgtcaactaagtcatccattaaga 39418033  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  39418032 gacggagggagta 39418020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 41172869 - 41172757
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||||||||||| ||||||||||||||||||||| |||||| || ||||||||| |||||||||||||| |||||||||||| | |||||||||||||    
T  41172869 atcttacatgatatcatttatctttgtgaattaatagaaaagtatgatcaaagtatatcaagtcaataatgcatattgtcaactagatcatttattaagg 41172770  T
Q  145 gatggagggagta 157  Q
    || || |||||||    
T  41172769 gacggggggagta 41172757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 45 - 151
Target Start/End: Complemental strand, 36199063 - 36198957
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || ||||||  ||||||||||| |||| ||||||||| |||||||||||| |||||||||||||||    
T  36199063 atcttacatgatattatttatctttgtgaattagtagaaaagtacggtcaaagtatatcaaatcaataatgcatattgtcaactaggtcatttattaagg 36198964  T
Q  145 gatggag 151  Q
    || ||||    
T  36198963 gacggag 36198957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 30708877 - 30708978
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||| ||||| || |||| | |||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||    
T  30708877 atcttacatgatattatttatctttgtaaattagtagaaaaatatggtcaaaatatatcaagtcaataatgtatattgtcaactaggtcatttattaagg 30708976  T
Q  145 ga 146  Q
    ||    
T  30708977 ga 30708978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 32776015 - 32775902
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||| ||||||||||||| |||| |||||||| || |||| | |||||||||||||||||||||||||||||||||||||||| |||||| |||| |||    
T  32776015 atctttcatgatattatttttcttagtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatctattgagg 32775916  T
Q  145 gatggagggagtaa 158  Q
    || |||||||||||    
T  32775915 gacggagggagtaa 32775902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 41463629 - 41463517
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||| ||||| || |||| |||||| |||||||||||| |||||||||||||||||||||| | ||||||||| ||     
T  41463629 atcttacatgatattatttatctttgtaaattagtagaaaaatgtggtgaaagtatgtcaaatcaataatgtatattgtcaactagatcatttattgaga 41463530  T
Q  145 gatggagggagta 157  Q
    || ||| ||||||    
T  41463529 gacggaaggagta 41463517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 45 - 151
Target Start/End: Original strand, 40598278 - 40598384
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| | || | |||||||||||||||||||| ||||||||||| |||    
T  40598278 atcttacatgatattatttatctttgtgaattattagaaaaatatggtcaaagtatattaaattaataatgtatattgtcaactaggtcatttattgagg 40598377  T
Q  145 gatggag 151  Q
    || ||||    
T  40598378 gagggag 40598384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 4083353 - 4083437
Alignment:
Q  42 aatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    ||||| |||||||||||||||||||||||||| ||| || |||| | ||||||||||||||||||||||||||||||||||||||    
T  4083353 aatattttacatgatattatttatctttgtgatttagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaa 4083437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 43925186 - 43925074
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | || ||||||||||| |||||||||||||||||| |||| | |||| | |||| |||    
T  43925186 atcttacatgatattatttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaataatgtatattatcaaataggtcgtctattgagg 43925087  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  43925086 gacggagggagta 43925074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 24283072 - 24282960
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | | |||||| |||||||| |||||||| ||||||||||||| | |||| |||| |||    
T  24283072 atcttacatgatattatttatctttgtgaattagtaaaaaaatatagtcaaaatatgtcaaatcaataatatatattgtcaactagatcatctattgagg 24282973  T
Q  145 gatggagggagta 157  Q
    || ||| ||||||    
T  24282972 gacggaaggagta 24282960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 157
Target Start/End: Original strand, 38963665 - 38963780
Alignment:
Q  42 aatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttatta 141  Q
    |||||||||||| ||||||||||||||||||||||| || |||| | || |||||||| |||||||||||||| |||||||||||   | |||| ||||     
T  38963665 aatatcttacataatattatttatctttgtgaattagtagaaaaatatgatcaaagtacgtcaagtcaataatatatattgtcaagcagatcatctattt 38963764  T
Q  142 agggatggagggagta 157  Q
    ||||| ||||||||||    
T  38963765 agggacggagggagta 38963780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 157
Target Start/End: Complemental strand, 13399215 - 13399105
Alignment:
Q  47 cttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaaggga 146  Q
    ||||||||||||||||||||||||| ||||| || |||| | |||| |||| |||| ||||||||||||||||||||||||| | |||| |||| |||||    
T  13399215 cttacatgatattatttatctttgtaaattagtagaaaaatatggttaaagaatgttaagtcaataatgtatattgtcaactagatcatctattgaggga 13399116  T
Q  147 tggagggagta 157  Q
     || |||||||    
T  13399115 cggggggagta 13399105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 332423 - 332504
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    ||||||||||||||||||||||||||||||||| || |||| | |  ||||||||||| |||||||||||||||||||||||    
T  332423 atcttacatgatattatttatctttgtgaattagtaaaaaaatataatcaaagtatgttaagtcaataatgtatattgtcaa 332504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 45 - 152
Target Start/End: Original strand, 1110441 - 1110548
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||||||||| || |||||||||| ||||  ||| | |||||||| || |||    
T  1110441 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaaatcaataatgtttatttccaaataggtcatttgttgagg 1110540  T
Q  145 gatggagg 152  Q
    || |||||    
T  1110541 gacggagg 1110548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 45 - 156
Target Start/End: Complemental strand, 38137643 - 38137533
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||||||||| ||||| ||||| ||||| ||||| | |||||| || | |||    
T  38137643 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtc-ataatatatatcgtcaaataggtcatctaatgagg 38137545  T
Q  145 gatggagggagt 156  Q
    || |||||||||    
T  38137544 gacggagggagt 38137533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 42020316 - 42020202
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtc-aaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaag 143  Q
    ||||||||||||||||||||| ||||||||||| || || | | ||||| ||||||||| || |||||||||||||||||||| | ||| || |||| ||    
T  42020316 atcttacatgatattatttatatttgtgaattagtagaataatatggtctaaagtatgttaaatcaataatgtatattgtcaaataggttatctattgag 42020217  T
Q  144 ggatggagggagtaa 158  Q
    ||| |||||||||||    
T  42020216 ggacggagggagtaa 42020202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 16941923 - 16941842
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    ||||||||| |||||||| |||||||||||||| || |||||| || ||||||||| |||||||||||||| ||||||||||    
T  16941923 atcttacataatattattcatctttgtgaattagtagaaaagtatgatcaaagtatatcaagtcaataatgcatattgtcaa 16941842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 17012588 - 17012507
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    ||||||||| |||||||| |||||||||||||| || |||||| || ||||||||| |||||||||||||| ||||||||||    
T  17012588 atcttacataatattattcatctttgtgaattagtagaaaagtatgatcaaagtatatcaagtcaataatgcatattgtcaa 17012507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 151
Target Start/End: Original strand, 4045999 - 4046104
Alignment:
Q  45 atcttacatgatat-tatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaag 143  Q
    |||||||||||||| | ||||||||||||||||| || |||||| ||  ||||||||||||| | | |||| ||||||||||||| |||||| |||||||    
T  4045999 atcttacatgatatatttttatctttgtgaattagtagaaaagtatg--caaagtatgtcaaatgagtaatatatattgtcaactaggtcatctattaag 4046096  T
Q  144 ggatggag 151  Q
    ||| ||||    
T  4046097 ggacggag 4046104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 43409431 - 43409503
Alignment:
Q  42 aatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataat 114  Q
    ||||||||  ||||||||||||||||||||  ||||||| |||| | |||||||||||| ||| |||||||||    
T  43409431 aatatcttttatgatattatttatctttgtatattaatagaaaaatatggtcaaagtatatcaggtcaataat 43409503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 162
Target Start/End: Complemental strand, 30776294 - 30776201
Alignment:
Q  63 tatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagggatggagggagtaatgtt 162  Q
    ||||||||| ||||| || |||| | | ||||||||||||||||||||||||||||  |||||    ||||||||||||| ||| |||||||||| ||||    
T  30776294 tatctttgtaaattagtagaaaaatattgtcaaagtatgtcaagtcaataatgtat--tgtca----ggtcatttattaatggacggagggagtattgtt 30776201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 157
Target Start/End: Complemental strand, 27668063 - 27667958
Alignment:
Q  52 atgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagggatggag 151  Q
    |||||||||||||||||||   |||| || |||| | |||||||||||||||||||||| | |  | ||||||||    ||||| || ||||||||||||    
T  27668063 atgatattatttatctttgcatattactagaaaaatatggtcaaagtatgtcaagtcaaaattacaaattgtcaaacaagtcatctaataagggatggag 27667964  T
Q  152 ggagta 157  Q
    ||||||    
T  27667963 ggagta 27667958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 135
Target Start/End: Complemental strand, 2543948 - 2543858
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||| |||||||||||||| |||||  ||| |||||||| | |||||||| ||| | |  ||||||||||||||| |||| | ||||||    
T  2543948 atcttatatgatattatttatttttgtatatttatataaaaatatggtcaaaatatattagatcaataatgtatattttcaaataggtcat 2543858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 126
Target Start/End: Original strand, 7106430 - 7106508
Alignment:
Q  48 ttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    |||||||||||||||||||||||||||||| || |||| | || | | ||||||| || |||||| ||| | |||||||    
T  7106430 ttacatgatattatttatctttgtgaattagtagaaaaatatgattagagtatgttaactcaatattgttttttgtcaa 7106508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 15177481 - 15177427
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagta 99  Q
    |||||| ||||||||||||||||||||  |||| ||||||| | |||||||||||    
T  15177481 atcttatatgatattatttatctttgtatattagtataaaaatatggtcaaagta 15177427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 159
Target Start/End: Complemental strand, 38963907 - 38963793
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || | ||||| | || | ||| ||||   ||||| |||||||||    
T  38963907 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcacttattaagg 38963808  T
Q  145 gatggagggagtaat 159  Q
    ||  |||||||||||    
T  38963807 gacagagggagtaat 38963793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 5030396 - 5030315
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    |||||| ||||||||||||||||||||  |||| ||||||| |  | |||||||||||||  |||| || ||| ||||||||    
T  5030396 atcttatatgatattatttatctttgtatattagtataaaaatacgatcaaagtatgtcagatcaaaaaggtacattgtcaa 5030315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 20917763 - 20917727
Alignment:
Q  123 tcaacttggtcatttattaagggatggagggagtaat 159  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  20917763 tcaactaggtcatttattaagggacggagggagtaat 20917727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 135
Target Start/End: Original strand, 42951543 - 42951622
Alignment:
Q  55 atattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcat 135  Q
    |||||||||||| |||||||||| || |||| | | |||||||||||| || |||||||| || |||||||| | ||||||    
T  42951543 atattatttatcgttgtgaattagtaaaaaa-tattgtcaaagtatgttaaatcaataatatacattgtcaaataggtcat 42951622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 1e-47; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 31854967 - 31855079
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  31854967 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataacgtatattgtcaactgagtcatttattaagg 31855066  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  31855067 gacggagggagta 31855079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 42 - 157
Target Start/End: Original strand, 8796195 - 8796310
Alignment:
Q  42 aatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttatta 141  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  8796195 aatatcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgttaagtcaataatgtatattgtcaactgggtcatttatta 8796294  T
Q  142 agggatggagggagta 157  Q
    ||||| ||||||||||    
T  8796295 agggacggagggagta 8796310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 45 - 158
Target Start/End: Original strand, 22020425 - 22020538
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  22020425 atcttacatgatattatttatctttgtgaattagtataaaagtgtggttaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttaataagg 22020524  T
Q  145 gatggagggagtaa 158  Q
    || |||||||||||    
T  22020525 gacggagggagtaa 22020538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 45 - 158
Target Start/End: Original strand, 25435560 - 25435673
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  25435560 atcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaaatcaataatgtatattgtcaactgggtcatttattaagg 25435659  T
Q  145 gatggagggagtaa 158  Q
    || |||| ||||||    
T  25435660 gacggagagagtaa 25435673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 45 - 159
Target Start/End: Original strand, 18992052 - 18992166
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||| ||||| || |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18992052 atcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatttattaagg 18992151  T
Q  145 gatggagggagtaat 159  Q
    || |||| |||||||    
T  18992152 gacggagcgagtaat 18992166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 20662171 - 20662058
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  20662171 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagg 20662072  T
Q  145 gatggagggagtaa 158  Q
    || |||||||||||    
T  20662071 gacggagggagtaa 20662058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 39 - 165
Target Start/End: Original strand, 30237310 - 30237436
Alignment:
Q  39 aataatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcattta 138  Q
    ||||||||||||||| ||||| ||||||||||||||||| || |||| | ||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  30237310 aataatatcttacattatattgtttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactatgtcattta 30237409  T
Q  139 ttaagggatggagggagtaatgtttat 165  Q
    |||||||| | |||||||||| |||||    
T  30237410 ttaagggacgaagggagtaatatttat 30237436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 643543 - 643431
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||  |||||||||| |||    
T  643543 atcttacatgatattatttatctttgtgacttagtataaaagtatggtcaaagtatgtcaagtcaattatgtatattgtcaactgagtcatttatttagg 643444  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  643443 gacggagggagta 643431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 11114714 - 11114826
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||| |||||||||||||||||||||| | ||||||||||||     
T  11114714 atcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaaatatgtcaaatcaataatgtatattgtcaactggatcatttattaaga 11114813  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  11114814 gacggagggagta 11114826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 7097985 - 7097873
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||||||||||| |||||||||||||   |||||||||||||    
T  7097985 atcttacatgatattatttatctttatgaattagtataaaagtatggtcaaagtatgttaagtcaataatctatattgtcaactgaatcatttattaagg 7097886  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  7097885 gacggagggagta 7097873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 16696128 - 16696016
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | ||||||||||||||||||||||| |||||||||||||||| |||||| |||| |||    
T  16696128 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaatgatgtatattgtcaactaggtcatctattgagg 16696029  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  16696028 gacggagggagta 16696016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 24150890 - 24151002
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||| ||||||||||||   | |||||||||||    
T  24150890 atcttacatgatattatttatctttgtgaattaatagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaaattatttattaagg 24150989  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  24150990 gacggagggagta 24151002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 42 - 157
Target Start/End: Original strand, 25163310 - 25163425
Alignment:
Q  42 aatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttatta 141  Q
    ||||||||| |||||||||||||||||||||||||| || |||| | |||||||||||| | |||||||||||||||||||||||||  ||||||||||     
T  25163310 aatatcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactatgtcatttattg 25163409  T
Q  142 agggatggagggagta 157  Q
    ||||| ||||||||||    
T  25163410 agggacggagggagta 25163425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 13207065 - 13206953
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | ||||||||| |||| |||||||||| |||||||||||| | |||||| |||| ||     
T  13207065 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagaatgttaagtcaataaagtatattgtcaaataggtcatctattgagt 13206966  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  13206965 gacggagggagta 13206953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 163
Target Start/End: Original strand, 33121691 - 33121809
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||| ||||||| || |||| | |||||||||||  ||||||||||||| |||||||||||   | ||||||||| |||    
T  33121691 atcttacatgatattatttatctttatgaattagtagaaaaatatggtcaaagtacatcaagtcaataatatatattgtcaaacagatcatttatttagg 33121790  T
Q  145 gatggagggagtaatgttt 163  Q
    ||  ||||||||| |||||    
T  33121791 gacagagggagtattgttt 33121809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 19068883 - 19068771
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||||||||||||| || ||||||||||||| || |||| | |||||||||||||| || ||||||||| || ||||||| | | |||| |||| |||    
T  19068883 atcttacatgatattacttctctttgtgaattagtagaaaaatatggtcaaagtatgttaaatcaataatgcattttgtcaaatagatcatctattgagg 19068784  T
Q  145 gatggagggagta 157  Q
    ||||||| |||||    
T  19068783 gatggagagagta 19068771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 105
Target Start/End: Complemental strand, 29986270 - 29986210
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaa 105  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| ||||    
T  29986270 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaa 29986210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 157
Target Start/End: Complemental strand, 29979064 - 29979024
Alignment:
Q  117 atattgtcaacttggtcatttattaagggatggagggagta 157  Q
    |||||||||||| ||||||||||||||||| ||||||||||    
T  29979064 atattgtcaactaggtcatttattaagggacggagggagta 29979024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 159
Target Start/End: Complemental strand, 9022952 - 9022838
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| |||||||||||||| |||||  |||| || |||| | |||||||||||||| | ||||| | || ||||| ||||   |||||||||||   |    
T  9022952 atcttatatgatattatttatttttgtatattagtagaaaaatatggtcaaagtatgttaggtcaaaattgcatattttcaaacaggtcatttattgcag 9022853  T
Q  145 gatggagggagtaat 159  Q
    || ||||||||||||    
T  9022852 gacggagggagtaat 9022838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 12869377 - 12869435
Alignment:
Q  52 atgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaa 110  Q
    ||||||||||||||||||||  |||| || |||| | |||||||| |||||||||||||    
T  12869377 atgatattatttatctttgtatattagtagaaaaatatggtcaaactatgtcaagtcaa 12869435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 159
Target Start/End: Original strand, 24798502 - 24798616
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || | ||||| | || | ||| ||||   |||||||||||  ||    
T  24798502 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 24798601  T
Q  145 gatggagggagtaat 159  Q
    || ||||||||||||    
T  24798602 gacggagggagtaat 24798616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 19788690 - 19788625
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaa 110  Q
    ||||||||||||||||||||| |||||  |||| || |||| | |||| ||||||||||| |||||    
T  19788690 atcttacatgatattatttatatttgtatattagtagaaaaatatggttaaagtatgtcaggtcaa 19788625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 2141680 - 2141568
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | || |||||||| || | ||||| | |||| ||| ||||   ||||| |||||||||    
T  2141680 atcttatatgatattatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattgtacattttcaaacaggtcacttattaagg 2141581  T
Q  145 gatggagggagta 157  Q
    || ||| ||||||    
T  2141580 gacggacggagta 2141568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 32541433 - 32541545
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | |||||||||||  | | ||||| | || ||||| ||||   |||||||||||  ||    
T  32541433 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaaattaggtcaaaattgcatattttcaaacaggtcatttattgcgg 32541532  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  32541533 gacggagggagta 32541545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 1e-47; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 32002126 - 32002014
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  32002126 atcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagg 32002027  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  32002026 gacggagggagta 32002014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 32334750 - 32334638
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  32334750 atcttacatgatattatttatctttgtcaattagtataaaagtgtggtcaaagtatgtcaaatcaataatgtatattgtcaactgggtcatttattaagg 32334651  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  32334650 gacggagggagta 32334638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 39894930 - 39895042
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| |||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  39894930 atcttatatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagg 39895029  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  39895030 gacggagggagta 39895042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 161
Target Start/End: Complemental strand, 4924950 - 4924834
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||| | |||||| ||||||||    
T  4924950 atcttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatatatattgtcaattaggtcatctattaagg 4924851  T
Q  145 gatggagggagtaatgt 161  Q
    || ||||| ||||||||    
T  4924850 gacggaggaagtaatgt 4924834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 5213034 - 5212922
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||| ||||| || |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  5213034 atcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatttattaaga 5212935  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  5212934 gacggagggagta 5212922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 29627417 - 29627529
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||| |||||||||||||||| ||||||||||| |||    
T  29627417 atcttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatgtatattgtcaactgggtcatttatttagg 29627516  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  29627517 gacggagggagta 29627529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 42148456 - 42148568
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  42148456 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagg 42148555  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  42148556 gacggagggagta 42148568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 51 - 159
Target Start/End: Original strand, 5364579 - 5364687
Alignment:
Q  51 catgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagggatgga 150  Q
    ||||||||||||||||||||||||||| || |||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  5364579 catgatattatttatctttgtgaattagtagaaaagtatggtcaaaatatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggacgga 5364678  T
Q  151 gggagtaat 159  Q
    | |||||||    
T  5364679 gagagtaat 5364687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 45 - 159
Target Start/End: Original strand, 39036559 - 39036673
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | ||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||    
T  39036559 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgacaagtcaataatgtatattgtcaactaggtcatctattaagg 39036658  T
Q  145 gatggagggagtaat 159  Q
    || ||||||| ||||    
T  39036659 gacggagggaataat 39036673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 40512792 - 40512679
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| | ||||||||||||||| ||||||||||||||||||||||  ||||||||||||||    
T  40512792 atcttacatgatattatttatctttgtgaattagtagaaaagtatagtcaaagtatgtcaaatcaataatgtatattgtcaactgagtcatttattaagg 40512693  T
Q  145 gatggagggagtaa 158  Q
    || |||| ||||||    
T  40512692 gacggagagagtaa 40512679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 22613821 - 22613709
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| | ||||||||||||||||||||||||| ||||||||||| |||    
T  22613821 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagg 22613722  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  22613721 gacggagggagta 22613709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 23988726 - 23988838
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| ||||||||||||  ||||||||||||||    
T  23988726 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaagtcatttattaagg 23988825  T
Q  145 gatggagggagta 157  Q
    || ||| ||||||    
T  23988826 gacggatggagta 23988838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 35448109 - 35447997
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||| |||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  35448109 atcttagatgttattatttatctttgtgaattagtaaaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagg 35448010  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  35448009 gacggagggagta 35447997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 39 - 158
Target Start/End: Complemental strand, 43517178 - 43517059
Alignment:
Q  39 aataatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcattta 138  Q
    ||||| ||||||||||||||||||||||||||||||||| || |||||| || ||||||||||||||||||||||| |||||||||||||  ||||| ||    
T  43517178 aataacatcttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaagtatgtcaagtcaataatatatattgtcaactaagtcatcta 43517079  T
Q  139 ttaagggatggagggagtaa 158  Q
    |||||||| ||||| |||||    
T  43517078 ttaagggacggaggaagtaa 43517059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 45 - 159
Target Start/End: Original strand, 35290435 - 35290549
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||| ||||||||||||||||||||||| || |||| | ||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||    
T  35290435 atcttacataatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgacaagtcaataatgtatattgtcaactaggtcatctattaagg 35290534  T
Q  145 gatggagggagtaat 159  Q
    || ||||| ||||||    
T  35290535 gacggaggaagtaat 35290549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 37843687 - 37843574
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||| ||||||||||||| || |||| | |||||||||||||||||||||||||||||||||||||| | |||||| |||| |||    
T  37843687 atcttacatgatattatttttctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaagtaggtcatctattgagg 37843588  T
Q  145 gatggagggagtaa 158  Q
    || |||||||||||    
T  37843587 gacggagggagtaa 37843574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 4299945 - 4299833
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| |||||||||||||||||||||||||| || |||| | |||||||||||| | ||||||||||||||||||||||||| ||||||||||| |||    
T  4299945 atcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagg 4299846  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  4299845 gacggagggagta 4299833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 14475342 - 14475230
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||| ||||||||||||| || |||| | |||||||||||||||||||||||||||||||||||||||| |||||| |||| | |    
T  14475342 atcttacatgatattatttttctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattgaag 14475243  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  14475242 gacggagggagta 14475230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 16048234 - 16048346
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| | ||||||||||||||||||||||||| ||||||||||| |||    
T  16048234 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagg 16048333  T
Q  145 gatggagggagta 157  Q
    || ||| ||||||    
T  16048334 gacggacggagta 16048346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 39405913 - 39406025
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| | ||||||||||||||||||||||||| ||||||||||| |||    
T  39405913 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagg 39406012  T
Q  145 gatggagggagta 157  Q
    || ||| ||||||    
T  39406013 gaaggatggagta 39406025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 45 - 152
Target Start/End: Original strand, 37516294 - 37516401
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| ||||||||||||||||||||||||||| ||| || ||||||||    
T  37516294 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgtatattgtcaactaggttatctattaagg 37516393  T
Q  145 gatggagg 152  Q
    || |||||    
T  37516394 gacggagg 37516401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 45 - 159
Target Start/End: Original strand, 38698112 - 38698226
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||||||||||||||| |||||||| ||||| || |||| | |||||||||||| |||||||||||||| ||||||||||||  ||||||||||||||    
T  38698112 atcttacatgatattattcatctttgtaaattagtaaaaaaatatggtcaaagtatatcaagtcaataatgcatattgtcaactaagtcatttattaagg 38698211  T
Q  145 gatggagggagtaat 159  Q
    || ||||||||||||    
T  38698212 gacggagggagtaat 38698226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 970287 - 970399
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| |||||||||||||||||||||||||| || |||| | |||||||||||| | |||| |||||||||||||||||||| ||||||||||| |||    
T  970287 atcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagttaataatgtatattgtcaactaggtcatttattgagg 970386  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  970387 gacggagggagta 970399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 41411269 - 41411157
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | ||||||||||| || ||||||||||| ||||||||||| |  |||||||||| |||    
T  41411269 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtacgttaagtcaataatatatattgtcaaatacgtcatttatttagg 41411170  T
Q  145 gatggagggagta 157  Q
    || ||| ||||||    
T  41411169 gacggatggagta 41411157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 1830804 - 1830916
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||| ||||||| || |||| | ||||||||||| || ||||||||||| ||||||||||| |  |||||||||| |||    
T  1830804 atcttacatgatattatttatctttatgaattagtagaaaaatatggtcaaagtacgttaagtcaataatatatattgtcaaatacgtcatttatttagg 1830903  T
Q  145 gatggagggagta 157  Q
    || ||| ||||||    
T  1830904 gacggatggagta 1830916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 163
Target Start/End: Original strand, 2864103 - 2864221
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| |||||||||||||||||||||||||| || |||| | |||| ||||||||| |||||||||||||||||| |||| |  ||||| |||| |||    
T  2864103 atcttatatgatattatttatctttgtgaattagtagaaaaatatggtgaaagtatgttaagtcaataatgtatattatcaaatatgtcatctattgagg 2864202  T
Q  145 gatggagggagtaatgttt 163  Q
    ||  || ||||||||||||    
T  2864203 gacagatggagtaatgttt 2864221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 25563649 - 25563747
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaag 143  Q
    |||||||||||||| |||||||||||||||||| || |||| | || ||||||||||| || ||||||||||| |||||||||| |||||| |||||||    
T  25563649 atcttacatgatataatttatctttgtgaattagtagaaaaatatgatcaaagtatgttaaatcaataatgtacattgtcaactaggtcatctattaag 25563747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 157
Target Start/End: Original strand, 43067380 - 43067482
Alignment:
Q  55 atattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagggatggaggga 154  Q
    ||||||||||||||||| ||||| || |||| | |||||||||||| | || |||||||||||||||||||||| ||||||||||| ||||| ||| |||    
T  43067380 atattatttatctttgtaaattagtagaaaaatatggtcaaagtatattaaatcaataatgtatattgtcaactaggtcatttattgagggacggatgga 43067479  T
Q  155 gta 157  Q
    |||    
T  43067480 gta 43067482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 19087728 - 19087647
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaa 126  Q
    |||| |||||||||||||||||||||||||||| || |||| | |||||||||||| | || ||||||||||||||||||||    
T  19087728 atctaacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaaatcaataatgtatattgtcaa 19087647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 119
Target Start/End: Complemental strand, 19868804 - 19868724
Alignment:
Q  39 aataatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtata 119  Q
    ||||| ||||||||||||||||||||||||||||||||| || |||| | |  ||||||||||| ||||||||||||||||    
T  19868804 aataacatcttacatgatattatttatctttgtgaattagtagaaaaatatcttcaaagtatgttaagtcaataatgtata 19868724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 40316271 - 40316366
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttatt 140  Q
    ||||||||||||||||||||||||| ||||||| || |||| | |||||||| || || ||||||||||| ||||||||||| |  ||||||||||    
T  40316271 atcttacatgatattatttatctttatgaattagtagaaaaatatggtcaaattacgttaagtcaataatatatattgtcaaatacgtcatttatt 40316366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 128
Target Start/End: Complemental strand, 30779858 - 30779775
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaact 128  Q
    ||||||||||||||||||||||||||| ||||| || |||| | |  ||||||| | | || ||||||||||||||||||||||    
T  30779858 atcttacatgatattatttatctttgtaaattagtagaaaaatataatcaaagtgtattaaatcaataatgtatattgtcaact 30779775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 13548325 - 13548212
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || | ||||| | || | ||| ||||   ||||| |||||||||    
T  13548325 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcacttattaagg 13548226  T
Q  145 gatggagggagtaa 158  Q
    || |||||||||||    
T  13548225 gacggagggagtaa 13548212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 158
Target Start/End: Original strand, 20040367 - 20040480
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || | ||||| | || | ||| ||||   |||||||||||| ||    
T  20040367 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgg 20040466  T
Q  145 gatggagggagtaa 158  Q
    || |||||||||||    
T  20040467 gacggagggagtaa 20040480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 158
Target Start/End: Original strand, 30721637 - 30721750
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  ||||||| |||| | |||||||| || || | ||||| | || | ||| |||| |  ||||||||||  ||    
T  30721637 atcttatatgatattatttatctttgtatattaatagaaaaatatggtcaaaataagttaggtcaaaattgcacattttcaaatatgtcatttattgcgg 30721736  T
Q  145 gatggagggagtaa 158  Q
    ||||||||||||||    
T  30721737 gatggagggagtaa 30721750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 157
Target Start/End: Original strand, 16954775 - 16954881
Alignment:
Q  48 ttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtata--ttgtcaacttggtcatttattaaggg 145  Q
    |||||||||||||||||||     |||||| || |||| | ||||||||| |||||||||||| ||| ||||  |||||||||  ||||| ||||||| |    
T  16954775 ttacatgatattatttatc-----gaattagtagaaaaatatggtcaaagcatgtcaagtcaaaaatatatatattgtcaactaagtcatctattaagag 16954869  T
Q  146 atggagggagta 157  Q
    | ||||||||||    
T  16954870 acggagggagta 16954881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 77
Target Start/End: Original strand, 19889803 - 19889834
Alignment:
Q  46 tcttacatgatattatttatctttgtgaatta 77  Q
    ||||||||||||||||||||||||||||||||    
T  19889803 tcttacatgatattatttatctttgtgaatta 19889834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 31191129 - 31191183
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagta 99  Q
    |||||| ||||||||||||||||||||  ||||||| |||| | |||||||||||    
T  31191129 atcttatatgatattatttatctttgtatattaatagaaaaatatggtcaaagta 31191183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 25946248 - 25946147
Alignment:
Q  39 aataatatcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcattta 138  Q
    |||||||||||| ||||||||||||||||||||  || | || |||| | |||| |||| |||| ||||||| | || | |||||||||  |||||| ||    
T  25946248 aataatatcttatatgatattatttatctttgtatatcagtagaaaaatatggttaaagaatgttaagtcaagagtgcacattgtcaaccaggtcatcta 25946149  T
Q  139 tt 140  Q
    ||    
T  25946148 tt 25946147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 1098287 - 1098175
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || | ||||| | || | ||| ||||   |||||||||||  ||    
T  1098287 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 1098188  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  1098187 gacggagggagta 1098175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 12901 - 13002
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12901 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagg 13000  T
Q  145 ga 146  Q
    ||    
T  13001 ga 13002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 10542 - 10643
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10542 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagg 10641  T
Q  145 ga 146  Q
    ||    
T  10642 ga 10643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 14208 - 14309
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||| ||||| || |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14208 atcttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagg 14307  T
Q  145 ga 146  Q
    ||    
T  14308 ga 14309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 41329 - 41217
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||| ||||||||||||||  |||||||||||||     
T  41329 atcttacatgatattatttatctttgtgaattagtataaaagtatggttaaagtatgtcaagtcaataacgtatattgtcaactaagtcatttattaaga 41230  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  41229 gacggagggagta 41217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 15328 - 15216
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||| ||||| || |  ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15328 atcttacatgatattatttatctttgtaaattagtagactagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatttattaagg 15229  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  15228 gacggagggagta 15216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 44220 - 44119
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  44220 atcttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagg 44121  T
Q  145 ga 146  Q
    ||    
T  44120 ga 44119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 45 - 154
Target Start/End: Original strand, 117470 - 117579
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| |||||||||||||  |||||||||||| |||||||||||||||    
T  117470 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatacatattgtcaactaggtcatttattaagg 117569  T
Q  145 gatggaggga 154  Q
    || |||||||    
T  117570 gacggaggga 117579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 1263 - 1369
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    ||||||||||||||||||||||||||||||||| || |||| | ||||||||||      |||||||||||||||||||||||| |||||| |||| | |    
T  1263 atcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagt------agtcaataatgtatattgtcaactaggtcatctattgacg 1356  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  1357 gacggagggagta 1369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 60 - 157
Target Start/End: Original strand, 14502 - 14599
Alignment:
Q  60 atttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagggatggagggagta 157  Q
    |||| ||||||||||||| || |||| | | |||||||||| |||| |||||||||||||||||||||| |||||| ||||  |||| ||| ||||||    
T  14502 atttttctttgtgaattagtagaaaaatatagtcaaagtatatcaaatcaataatgtatattgtcaactaggtcatctattgtgggacggatggagta 14599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 140
Target Start/End: Complemental strand, 38333 - 38249
Alignment:
Q  56 tattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttatt 140  Q
    ||||||||| |||||||| ||| || |||| | |||||||||||| | || |||| ||||||||||||||| | |||||| ||||    
T  38333 tattatttacctttgtgacttagtagaaaaatatggtcaaagtattttaaatcaaaaatgtatattgtcaaataggtcatctatt 38249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 1101 - 1036
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaa 110  Q
    |||||| ||||||||||||||||||||  |||| ||||||| |  ||||||| ||||||| |||||    
T  1101 atcttatatgatattatttatctttgtatattagtataaaaatacggtcaaaatatgtcaggtcaa 1036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 5488 - 5376
Alignment:
Q  45 atcttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaacttggtcatttattaagg 144  Q
    |||||| ||||||||||||||||||||  |||| || |||| | ||||||||||| || | ||||| | || | ||| ||||   |||||||||||  ||    
T  5488 atcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgg 5389  T
Q  145 gatggagggagta 157  Q
    || ||||||||||    
T  5388 gacggagggagta 5376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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