View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0708_low_31 (Length: 251)

Name: NF0708_low_31
Description: NF0708
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0708_low_31
NF0708_low_31
[»] scaffold0180 (1 HSPs)
scaffold0180 (22-251)||(15103-15341)
[»] chr7 (29 HSPs)
chr7 (54-251)||(17835431-17835628)
chr7 (54-251)||(10517335-10517532)
chr7 (22-251)||(39460883-39461120)
chr7 (54-251)||(47672606-47672803)
chr7 (50-251)||(15073746-15073946)
chr7 (54-251)||(27453140-27453337)
chr7 (50-251)||(42507545-42507745)
chr7 (54-251)||(47776689-47776886)
chr7 (54-251)||(36977953-36978150)
chr7 (54-251)||(37340659-37340856)
chr7 (54-251)||(9494317-9494513)
chr7 (54-251)||(34738721-34738918)
chr7 (54-251)||(14689579-14689776)
chr7 (87-220)||(556200-556333)
chr7 (89-220)||(5541096-5541227)
chr7 (101-220)||(48403743-48403862)
chr7 (101-220)||(41880876-41880995)
chr7 (108-220)||(17741023-17741135)
chr7 (101-220)||(35609984-35610103)
chr7 (89-220)||(46740103-46740234)
chr7 (89-206)||(16675186-16675303)
chr7 (89-206)||(17649554-17649671)
chr7 (101-220)||(45257374-45257492)
chr7 (101-220)||(9370958-9371073)
chr7 (141-220)||(17465329-17465408)
chr7 (141-220)||(17587806-17587885)
chr7 (159-210)||(41734559-41734610)
chr7 (101-138)||(17462862-17462899)
chr7 (101-138)||(17590315-17590352)
[»] chr3 (37 HSPs)
chr3 (54-251)||(42165517-42165714)
chr3 (22-251)||(4007804-4008041)
chr3 (54-251)||(3976061-3976258)
chr3 (54-251)||(47073728-47073925)
chr3 (54-251)||(44230068-44230265)
chr3 (54-251)||(50216399-50216596)
chr3 (54-251)||(50963309-50963505)
chr3 (56-251)||(20917540-20917735)
chr3 (56-251)||(20926502-20926697)
chr3 (54-251)||(30255523-30255720)
chr3 (54-251)||(49195968-49196165)
chr3 (54-251)||(42805783-42805980)
chr3 (54-249)||(42756510-42756703)
chr3 (54-232)||(48563301-48563479)
chr3 (54-251)||(48889098-48889286)
chr3 (98-251)||(597113-597266)
chr3 (118-251)||(3501477-3501610)
chr3 (89-220)||(16611463-16611594)
chr3 (89-220)||(22047659-22047790)
chr3 (87-220)||(17567618-17567751)
chr3 (89-220)||(41612753-41612884)
chr3 (101-220)||(52390964-52391083)
chr3 (162-251)||(51807324-51807413)
chr3 (89-220)||(20351030-20351161)
chr3 (101-220)||(2274482-2274601)
chr3 (101-220)||(29009245-29009364)
chr3 (89-220)||(36127822-36127953)
chr3 (101-220)||(42903758-42903877)
chr3 (101-220)||(46389347-46389466)
chr3 (101-220)||(50480352-50480471)
chr3 (101-220)||(54386509-54386628)
chr3 (101-220)||(49144031-49144149)
chr3 (101-220)||(34045762-34045880)
chr3 (101-220)||(46701593-46701712)
chr3 (108-210)||(4178199-4178301)
chr3 (108-218)||(31045169-31045279)
chr3 (108-210)||(4172201-4172303)
[»] chr2 (25 HSPs)
chr2 (54-251)||(39947955-39948152)
chr2 (50-251)||(28468996-28469196)
chr2 (54-251)||(45428946-45429142)
chr2 (50-251)||(17420922-17421122)
chr2 (58-236)||(21998560-21998737)
chr2 (54-251)||(32955880-32956072)
chr2 (118-251)||(25965175-25965308)
chr2 (89-220)||(29401160-29401291)
chr2 (154-251)||(7185384-7185481)
chr2 (89-220)||(25515366-25515496)
chr2 (89-220)||(36655906-36656037)
chr2 (95-220)||(45284558-45284683)
chr2 (95-220)||(45291921-45292046)
chr2 (89-220)||(10828581-10828712)
chr2 (101-220)||(20938282-20938401)
chr2 (54-197)||(45136824-45136956)
chr2 (101-220)||(3940297-3940416)
chr2 (101-220)||(5352351-5352470)
chr2 (101-220)||(15831514-15831633)
chr2 (101-220)||(30496515-30496634)
chr2 (101-220)||(43978906-43979025)
chr2 (101-220)||(43539306-43539425)
chr2 (50-127)||(22686858-22686934)
chr2 (204-251)||(45137103-45137150)
chr2 (132-218)||(31367427-31367513)
[»] chr8 (29 HSPs)
chr8 (54-251)||(43211860-43212057)
chr8 (54-251)||(5303742-5303939)
chr8 (65-251)||(39602070-39602256)
chr8 (54-251)||(39846507-39846704)
chr8 (54-251)||(39938737-39938934)
chr8 (54-251)||(43188404-43188601)
chr8 (54-251)||(15036249-15036446)
chr8 (50-251)||(489147-489347)
chr8 (54-251)||(34822538-34822735)
chr8 (89-251)||(39252366-39252528)
chr8 (50-251)||(42485047-42485256)
chr8 (50-251)||(45064596-45064786)
chr8 (89-251)||(40076806-40076968)
chr8 (54-220)||(2984508-2984674)
chr8 (54-251)||(41249610-41249791)
chr8 (97-226)||(37327163-37327292)
chr8 (89-220)||(35552051-35552182)
chr8 (89-220)||(20857671-20857802)
chr8 (89-220)||(24249868-24249999)
chr8 (94-220)||(45128135-45128261)
chr8 (101-220)||(25095-25214)
chr8 (101-220)||(1052910-1053029)
chr8 (101-220)||(23021889-23022008)
chr8 (101-220)||(26659832-26659951)
chr8 (89-192)||(34371450-34371553)
chr8 (89-220)||(5677456-5677587)
chr8 (202-251)||(25864609-25864658)
chr8 (108-218)||(22495305-22495415)
chr8 (54-86)||(39252522-39252554)
[»] chr1 (30 HSPs)
chr1 (54-250)||(31783249-31783445)
chr1 (54-251)||(35258394-35258591)
chr1 (54-251)||(45825231-45825429)
chr1 (54-251)||(51321069-51321266)
chr1 (50-251)||(19925097-19925297)
chr1 (50-251)||(30890416-30890616)
chr1 (54-251)||(19527064-19527261)
chr1 (54-251)||(49857467-49857661)
chr1 (54-251)||(23275625-23275822)
chr1 (54-251)||(52802486-52802683)
chr1 (22-251)||(47502670-47502895)
chr1 (89-220)||(21141413-21141544)
chr1 (89-220)||(50343525-50343656)
chr1 (89-220)||(97504-97635)
chr1 (101-220)||(2365622-2365741)
chr1 (101-220)||(19156401-19156520)
chr1 (89-220)||(47656256-47656386)
chr1 (89-220)||(2424924-2425053)
chr1 (89-220)||(22524521-22524650)
chr1 (101-220)||(3731949-3732068)
chr1 (101-220)||(13639591-13639710)
chr1 (109-220)||(17514272-17514383)
chr1 (101-220)||(26876043-26876162)
chr1 (96-210)||(38127045-38127160)
chr1 (132-220)||(8474171-8474259)
chr1 (149-218)||(23935581-23935650)
chr1 (214-251)||(29622105-29622142)
chr1 (118-177)||(16243106-16243165)
chr1 (132-179)||(25166976-25167023)
chr1 (132-210)||(25147698-25147776)
[»] chr5 (18 HSPs)
chr5 (50-251)||(8580023-8580223)
chr5 (54-251)||(17658677-17658874)
chr5 (54-251)||(19228193-19228390)
chr5 (54-251)||(42537504-42537701)
chr5 (50-250)||(28876999-28877198)
chr5 (54-251)||(38968452-38968650)
chr5 (54-251)||(7757679-7757876)
chr5 (54-251)||(8701745-8701942)
chr5 (50-251)||(28241317-28241517)
chr5 (54-251)||(42942008-42942204)
chr5 (54-251)||(512293-512490)
chr5 (108-250)||(14264-14406)
chr5 (89-220)||(5197359-5197490)
chr5 (87-220)||(40624468-40624601)
chr5 (101-220)||(19040685-19040804)
chr5 (92-220)||(20422335-20422463)
chr5 (108-220)||(27673228-27673340)
chr5 (101-220)||(30705522-30705641)
[»] chr4 (36 HSPs)
chr4 (54-251)||(21022410-21022606)
chr4 (54-251)||(51683557-51683754)
chr4 (54-251)||(37021604-37021801)
chr4 (54-251)||(50275089-50275286)
chr4 (50-251)||(30726259-30726459)
chr4 (50-251)||(40357798-40357998)
chr4 (54-251)||(48256092-48256289)
chr4 (50-251)||(1089102-1089302)
chr4 (54-251)||(55407308-55407505)
chr4 (50-251)||(1308632-1308832)
chr4 (54-251)||(50901835-50902031)
chr4 (97-250)||(67947-68100)
chr4 (97-251)||(46436599-46436753)
chr4 (54-220)||(11050044-11050210)
chr4 (89-220)||(21538008-21538139)
chr4 (89-220)||(50023099-50023230)
chr4 (65-218)||(14315772-14315925)
chr4 (89-220)||(10752983-10753114)
chr4 (89-220)||(10966752-10966883)
chr4 (89-220)||(50030217-50030348)
chr4 (108-220)||(41798570-41798682)
chr4 (101-220)||(9892836-9892955)
chr4 (89-218)||(14297523-14297652)
chr4 (89-218)||(41933179-41933308)
chr4 (89-220)||(3184342-3184473)
chr4 (89-220)||(3185440-3185571)
chr4 (89-220)||(3185648-3185779)
chr4 (101-220)||(6181358-6181477)
chr4 (101-220)||(49090806-49090925)
chr4 (101-220)||(49165419-49165538)
chr4 (97-210)||(30704419-30704532)
chr4 (89-220)||(44679631-44679762)
chr4 (89-218)||(11083562-11083691)
chr4 (101-220)||(31422083-31422203)
chr4 (100-220)||(50193864-50193985)
chr4 (108-210)||(4719953-4720055)
[»] chr6 (13 HSPs)
chr6 (54-251)||(6320084-6320281)
chr6 (54-251)||(31769060-31769257)
chr6 (54-251)||(24088303-24088500)
chr6 (89-220)||(24722314-24722445)
chr6 (108-220)||(21600990-21601102)
chr6 (89-220)||(3501555-3501686)
chr6 (89-219)||(26423384-26423514)
chr6 (101-220)||(6201534-6201653)
chr6 (101-220)||(11688501-11688620)
chr6 (101-220)||(22301566-22301685)
chr6 (101-220)||(30829220-30829339)
chr6 (101-220)||(27617101-27617220)
chr6 (65-208)||(3381182-3381313)
[»] scaffold0293 (1 HSPs)
scaffold0293 (50-251)||(246-446)
[»] scaffold0634 (1 HSPs)
scaffold0634 (99-251)||(7773-7925)
[»] scaffold0238 (1 HSPs)
scaffold0238 (89-219)||(18489-18619)
[»] scaffold0155 (1 HSPs)
scaffold0155 (97-199)||(10761-10863)
[»] scaffold0877 (1 HSPs)
scaffold0877 (89-220)||(4210-4341)
[»] scaffold0007 (2 HSPs)
scaffold0007 (132-180)||(246180-246228)
scaffold0007 (108-218)||(251051-251161)


Alignment Details
Target: scaffold0180 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 22 - 251
Target Start/End: Original strand, 15103 - 15341
Alignment:
Q  22 catcatcattcttgtaacctaaactaaccaaaa---------tacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaac 112  Q
    |||||| ||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15103 catcataattcttgtaacctaaactaaccaaaaaaatcaatatacacttaaccaaactataattaacatcatttatatcatttccataacctaaactaac 15202  T
Q  113 taaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagc 212  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15203 taaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagc 15302  T
Q  213 cacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15303 cacattatgatttaaacaacataggcaataactacattc 15341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 186; Significance: 1e-101; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 54 - 251
Target Start/End: Complemental strand, 17835628 - 17835431
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  17835628 atacacttaaccaaactataattaacatcatttatatcatttccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaac 17835529  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17835528 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattc 17835431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 54 - 251
Target Start/End: Complemental strand, 10517532 - 10517335
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||    
T  10517532 atacacttaaccaaactataattaacatcatttatatcatttccataacctaaactaactaaataatcaataaaattgtcattgagacattttatcaaac 10517433  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10517432 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattc 10517335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 22 - 251
Target Start/End: Complemental strand, 39461120 - 39460883
Alignment:
Q  22 catcatcattcttgtaacctaaactaaccaaaa--------tacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaact 113  Q
    |||||| ||||||||||||||||||||| ||||        |||||||||||||||||||||||||||||||| || ||| |||||||||||| ||||||    
T  39461120 catcataattcttgtaacctaaactaactaaaacatcaatatacacttaaccaaactataattaacatcatttctaccatatccataacctaaactaact 39461021  T
Q  114 aaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagcc 213  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39461020 aaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagcc 39460921  T
Q  214 acattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  39460920 acattatgatttaaacaaaataggcaacaactacattc 39460883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 47672606 - 47672803
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||| |||||||    
T  47672606 atacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaac 47672705  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  47672706 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattc 47672803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 50 - 251
Target Start/End: Original strand, 15073746 - 15073946
Alignment:
Q  50 caaaatacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatc 149  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| |||||||| |||||||||    
T  15073746 caaaataaacttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatc 15073844  T
Q  150 aaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacat 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  15073845 aaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaactacataggcaacaactacat 15073944  T
Q  250 tc 251  Q
    ||    
T  15073945 tc 15073946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 27453140 - 27453337
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||| ||| |||| |||||||||||||    
T  27453140 atacacttaaccaaactataattaacatcatttctatcatttccataacctaaactgactaaataatcaataaaattgtcaatgagacattttatcaaac 27453239  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  27453240 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggtaacaactacattc 27453337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 50 - 251
Target Start/End: Original strand, 42507545 - 42507745
Alignment:
Q  50 caaaatacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatc 149  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| |||||||| |||||||||    
T  42507545 caaaataaacttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatc 42507643  T
Q  150 aaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacat 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  42507644 aaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaactacataggcaacaactacat 42507743  T
Q  250 tc 251  Q
    ||    
T  42507744 tc 42507745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 54 - 251
Target Start/End: Complemental strand, 47776886 - 47776689
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| || |||||||| |||||||||||||    
T  47776886 atacacttaaccagactataattaacatcatttctatcatttccataacctaaactaactaaataatcaataaatttgtcattgagacattttatcaaac 47776787  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  47776786 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgtcaccattcaaagccacattatgatttaaacaacataggcaacaactacattc 47776689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 54 - 251
Target Start/End: Complemental strand, 36978150 - 36977953
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||| |||||||    
T  36978150 atacacttaaccaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaac 36978051  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  36978050 actttgtgtgcaaagtataaaacatattcaaattatgttcatttaccaccattcaaagtcacattatgatttaaacaacataggcaacaactacattc 36977953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 54 - 251
Target Start/End: Complemental strand, 37340856 - 37340659
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    |||| |||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||| |||||||    
T  37340856 atactcttaaccaaactataattaacagcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaac 37340757  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  37340756 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaagtacattc 37340659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 9494317 - 9494513
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    |||||||||| |||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||| |||| ||||||| |||||| |||||||    
T  9494317 atacacttaatcaaactataattaacatcatttctatcatt-ccataacctaaactaactaaataatcaatataattttcattgacgcatttgatcaaac 9494415  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9494416 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattc 9494513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 54 - 251
Target Start/End: Complemental strand, 34738918 - 34738721
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||| |||| ||| |||||||||||||    
T  34738918 atacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactacataatcaataaaattgtcatcgagacattttatcaaac 34738819  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  34738818 actttgtgagcaaagcataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggtaacaactacattc 34738721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 14689579 - 14689776
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||| ||| |||||||||||||||||| |||| |||||||||||||| |||||||    
T  14689579 atacacttaaccaaacaataattaacatcatttttatcatttccataacataaactaactaaataatcaatataattttcattgaggcatttgatcaaac 14689678  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||| |||||||||||||| |||||||||||||||| ||||||||| ||||||||| ||||||| ||||||||||||||| ||| ||||||||||    
T  14689679 actttgtatgcaaagtataaaagatattcaaattgtgtttatttgccactattcaaagctacattatcatttaaacaacatagacaacaactacattc 14689776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 87 - 220
Target Start/End: Original strand, 556200 - 556333
Alignment:
Q  87 atatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaat 186  Q
    |||| |||| |||||| ||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||| |||||     
T  556200 atataattttcataacataaactaactaaataataaataaaattgtcattgaggcattttatcaaacactttgtatgcaaagtatcaaacatactcaaaa 556299  T
Q  187 tgtgttcatttgccaccattcaaagccacattat 220  Q
    | |||||||||||||||||||||| |||||||||    
T  556300 tatgttcatttgccaccattcaaaaccacattat 556333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 5541096 - 5541227
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||| ||||| |     
T  5541096 atcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacaatttgtgtgcaaagtatcaaacatactcaaaata 5541195  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    || || |||||||||||||||| |||| ||||    
T  5541196 tgatcttttgccaccattcaaaaccacgttat 5541227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 48403862 - 48403743
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  ||||||    
T  48403862 acctaaactaactaaataatcaataaaattatcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 48403763  T
Q  201 accattcaaagccacattat 220  Q
    |||||||||| |||||||||    
T  48403762 accattcaaaaccacattat 48403743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 41880995 - 41880876
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  ||||||    
T  41880995 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 41880896  T
Q  201 accattcaaagccacattat 220  Q
    |||||||||| |||||||||    
T  41880895 accattcaaaaccacattat 41880876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 17741023 - 17741135
Alignment:
Q  108 ctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattc 207  Q
    |||||||||||||||||| |||| |||||  || |||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||    
T  17741023 ctaactaaataatcaatataattctcatttgggaattttatcaaacactttgtgtgcaaagtatcaaacatattcaaattgtgttcatatggcaccattc 17741122  T
Q  208 aaagccacattat 220  Q
    ||| |||||||||    
T  17741123 aaaaccacattat 17741135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 35609984 - 35610103
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  ||||||    
T  35609984 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 35610083  T
Q  201 accattcaaagccacattat 220  Q
    |||| ||||| |||||||||    
T  35610084 accaatcaaaaccacattat 35610103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 46740103 - 46740234
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| ||||| |||||| |||| |||||||||||||||||| |||||||  ||||||||||| ||||||||||||||||||| ||||||| ||||| ||    
T  46740103 atcatatccatgacctaaactaattaaataatcaataaaattgtcattgacacattttatcaatcactttgtgtgcaaagtatcaaacatactcaaaatg 46740202  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    ||||| ||||||||||||||||  ||||||||    
T  46740203 tgttcttttgccaccattcaaaatcacattat 46740234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 16675303 - 16675186
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| |||||||||||| ||||| ||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||| ||||||| ||||| ||    
T  16675303 atcatatccataacctaaactaacaaaataatcaataaaattgtcattgagacattttattaaacactttgtgtgcaaagtatcaaacatactcaaaatg 16675204  T
Q  189 tgttcatttgccaccatt 206  Q
    | ||| ||||||||||||    
T  16675203 tattcttttgccaccatt 16675186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 17649671 - 17649554
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| |||||||||||| ||||| ||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||| ||||||| ||||| ||    
T  17649671 atcatatccataacctaaactaacaaaataatcaataaaattgtcattgagacattttattaaacactttgtgtgcaaagtatcaaacatactcaaaatg 17649572  T
Q  189 tgttcatttgccaccatt 206  Q
    | ||| ||||||||||||    
T  17649571 tattcttttgccaccatt 17649554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 45257492 - 45257374
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  ||| ||    
T  45257492 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgtt-ttttacc 45257394  T
Q  201 accattcaaagccacattat 220  Q
    |||||||||| |||||||||    
T  45257393 accattcaaaaccacattat 45257374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 9370958 - 9371073
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||    |||| ||||| ||||||  ||||||    
T  9370958 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtat----catactcaaaatgtgttattttgcc 9371053  T
Q  201 accattcaaagccacattat 220  Q
    |||| ||||| |||||||||    
T  9371054 accaatcaaaaccacattat 9371073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 17465329 - 17465408
Alignment:
Q  141 cattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattat 220  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  |||||||||||||||| |||||||||    
T  17465329 cattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccaccattcaaaaccacattat 17465408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 17587885 - 17587806
Alignment:
Q  141 cattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattat 220  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  |||||||||||||||| |||||||||    
T  17587885 cattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccaccattcaaaaccacattat 17587806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 41734610 - 41734559
Alignment:
Q  159 gtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaa 210  Q
    ||||||||||||| ||||||| | ||| ||||||| ||||||||||||||||    
T  41734610 gtgtgcaaagtatcaaacatactaaaaatgtgttcttttgccaccattcaaa 41734559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 17462862 - 17462899
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattga 138  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  17462862 acctaaactaactaaataatcaataaaattgtcattga 17462899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 17590352 - 17590315
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattga 138  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  17590352 acctaaactaactaaataatcaataaaattgtcattga 17590315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 182; Significance: 2e-98; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 54 - 251
Target Start/End: Complemental strand, 42165714 - 42165517
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  42165714 atacacttaaccaaactataattaacatcatttatatcatttccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaac 42165615  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  42165614 actttgtgtgcaaagtataaaatatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattc 42165517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 22 - 251
Target Start/End: Original strand, 4007804 - 4008041
Alignment:
Q  22 catcatcattcttgtaacctaaactaaccaaaa--------tacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaact 113  Q
    |||||| ||||||||||||||||||||| ||||        ||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  4007804 catcataattcttgtaacctaaactaactaaaaaatcaatatacacttaatcaaactataattaacatcctttatatcatttccataacctaaactaact 4007903  T
Q  114 aaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagcc 213  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4007904 aaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagcc 4008003  T
Q  214 acattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  4008004 acattatgatttaaacaacataggcaacaactacattc 4008041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 54 - 251
Target Start/End: Complemental strand, 3976258 - 3976061
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||    
T  3976258 atacacttaaccaaactataattaacatcctttatatcatttccataacctaaactaactaaataatcaataaaattgtcattgagacattttatcaaac 3976159  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  3976158 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaactacataggcaacaactacattc 3976061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 47073728 - 47073925
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  47073728 atacacttaaccaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaac 47073827  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  47073828 actttgtgtgcaaagtataaaatatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaatataggcaacaactacattc 47073925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 54 - 251
Target Start/End: Complemental strand, 44230265 - 44230068
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  44230265 atacacttaaccaaactataattaacatcatttctatcatttccataacctaaaccaactaaataatcaataaaattgtcattgaggcattttatcaaac 44230166  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||    
T  44230165 acattgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccgttcaaagccacattatgttttaaacaacataggcaacaactacattc 44230068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 50216399 - 50216596
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| | ||||||||||||||| ||||||| ||||||||||||||    
T  50216399 atacacttaaccaaactataattaacatcatttctatcatttccataacctaaactaaccacataatcaataaaattgtcattgaagcattttatcaaac 50216498  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  50216499 actttgtgtgcaaagcataaaacatattcaaattgtgttcatttgccaccattcaaaaccacattatgatttaaacaacataggcaacaactacattc 50216596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 54 - 251
Target Start/End: Complemental strand, 50963505 - 50963309
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||  |||||||| ||| ||||||||||||||||||    
T  50963505 atacacttaaccaaactata-ttaacatcatttatatcatttccataacctaaactaactaaataatttataaaattgtcactgaggcattttatcaaac 50963407  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  50963406 actttgtgtgtaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattc 50963309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 56 - 251
Target Start/End: Original strand, 20917540 - 20917735
Alignment:
Q  56 acacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacac 155  Q
    |||||||||||||||||||||||||||||||  |||||||||||||| ||| |||||||||||||||||| |||| |||||||||||||| |||||||||    
T  20917540 acacttaaccaaactataattaacatcatttcaatcatttccataacttaaactaactaaataatcaatataattttcattgaggcatttgatcaaacac 20917639  T
Q  156 tttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  20917640 tttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacataggcaacaactacattc 20917735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 56 - 251
Target Start/End: Original strand, 20926502 - 20926697
Alignment:
Q  56 acacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacac 155  Q
    |||||||||||||||||||||||||||||||  |||||||||||||| ||| |||||||||||||||||| |||| |||||||||||||| |||||||||    
T  20926502 acacttaaccaaactataattaacatcatttcaatcatttccataacttaaactaactaaataatcaatataattttcattgaggcatttgatcaaacac 20926601  T
Q  156 tttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  20926602 tttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacataggcaacaactacattc 20926697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 30255523 - 30255720
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| |||||| | |||||||||||||||||| || | |||||||||||||| |||||||    
T  30255523 atacacttaatcaaactataattaacatcatttctatcatttccttaacctgaactaactaaataatcaatataaatttcattgaggcatttgatcaaac 30255622  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30255623 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattc 30255720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 49195968 - 49196165
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||| ||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||| |||| ||||||| |||||| |||||||    
T  49195968 atacaattaaccaaactataattaacatcatttctatcattttcataacctaaactaactaaataatcaatataattttcattgaagcatttgatcaaac 49196067  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  49196068 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacataggcaacaactacattc 49196165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 42805783 - 42805980
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    |||||| ||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||| |||||||    
T  42805783 atacacctaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaac 42805882  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||    
T  42805883 attttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatcatttaaacaacatagacaacaactacattc 42805980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 54 - 249
Target Start/End: Complemental strand, 42756703 - 42756510
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||  || |||||||||||||| |||||||    
T  42756703 atacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaataa--ttttcattgaggcatttgatcaaac 42756606  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacat 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||    
T  42756605 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagcgacattatgatttaaacaacatagacaacaactacat 42756510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 54 - 232
Target Start/End: Complemental strand, 48563479 - 48563301
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||| |||||||    
T  48563479 atacacttaaccaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaac 48563380  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaac 232  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  48563379 attttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagacacattatgatttaaacaac 48563301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 54 - 251
Target Start/End: Complemental strand, 48889286 - 48889098
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    |||||||||||||||||||||||||||||||||         ||||||||||| |||||||||||||||||| |||| |||||||||| ||| |||||||    
T  48889286 atacacttaaccaaactataattaacatcattt---------ccataacctaaactaactaaataatcaatataattttcattgaggcctttgatcaaac 48889196  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  48889195 actttgtgtgcaaagtataaaacatattcaaattatgttcatttaccaccattcaaagtcacattatgatttaaacaacataggcaacaactacattc 48889098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 98 - 251
Target Start/End: Complemental strand, 597266 - 597113
Alignment:
Q  98 ataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcattt 197  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||| |||    
T  597266 ataacctaagctaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtatcaaacataatcaaaatgtgttctttt 597167  T
Q  198 gccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  597166 gccaccattcaaagccacattatgatttaaacaacatgggcaacaactacattc 597113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 118 - 251
Target Start/End: Original strand, 3501477 - 3501610
Alignment:
Q  118 aatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacat 217  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3501477 aatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaacccacat 3501576  T
Q  218 tatgatttaaacaacataggcaataactacattc 251  Q
    ||||||||||||||||||||||| ||||||||||    
T  3501577 tatgatttaaacaacataggcaacaactacattc 3501610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 16611594 - 16611463
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  16611594 atcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 16611495  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    ||||| |||||||||||||||| |||||||||    
T  16611494 tgttcttttgccaccattcaaaaccacattat 16611463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 22047659 - 22047790
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  22047659 atcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 22047758  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    ||||| |||||||||||||||| |||||||||    
T  22047759 tgttcttttgccaccattcaaaaccacattat 22047790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 87 - 220
Target Start/End: Original strand, 17567618 - 17567751
Alignment:
Q  87 atatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaat 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||     
T  17567618 atatcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaa 17567717  T
Q  187 tgtgttcatttgccaccattcaaagccacattat 220  Q
    ||||||| |||||||||||| ||| |||||||||    
T  17567718 tgtgttcttttgccaccattgaaaaccacattat 17567751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 41612884 - 41612753
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| ||||||| |||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  41612884 atcatatccataaactaaactaactagataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 41612785  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    ||||| |||||||||||||||| |||||||||    
T  41612784 tgttcttttgccaccattcaaaaccacattat 41612753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 52390964 - 52391083
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| |||||||||||||||||||| || |||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||    
T  52390964 acctaaactaactaaataatcaataaatttgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatattcaaattgtgttattttgcc 52391063  T
Q  201 accattcaaagccacattat 220  Q
    |||||||||| |||||||||    
T  52391064 accattcaaaaccacattat 52391083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 162 - 251
Target Start/End: Complemental strand, 51807413 - 51807324
Alignment:
Q  162 tgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  51807413 tgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagacaacaactacattc 51807324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 20351161 - 20351030
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcatttt-atcaaacactttgtgtgcaaagtataaaacatattcaaatt 187  Q
    ||||| |||||||||||| ||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| ||||||| ||||| |    
T  20351161 atcatatccataacctaaactaactaaataatcaataaaattgtcattgagacattttaatcaaacactttgtgtgcaaagtatcaaacatactcaaa-t 20351063  T
Q  188 gtgttcatttgccaccattcaaagccacattat 220  Q
    |||||| |||||||||||||||| ||| |||||    
T  20351062 gtgttcttttgccaccattcaaaaccaaattat 20351030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 2274482 - 2274601
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||| ||| ||    
T  2274482 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttccc 2274581  T
Q  201 accattcaaagccacattat 220  Q
    |||||||||| |||||||||    
T  2274582 accattcaaaaccacattat 2274601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 29009364 - 29009245
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  ||||||    
T  29009364 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 29009265  T
Q  201 accattcaaagccacattat 220  Q
    |||||||||| |||||||||    
T  29009264 accattcaaaaccacattat 29009245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 36127953 - 36127822
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| |||||| ||||| ||||| |||||||||| |||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  36127953 atcatatccatagcctaaactaaccaaataatcaagaaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 36127854  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    ||||| |||||||||||||||| |||||||||    
T  36127853 tgttcttttgccaccattcaaaaccacattat 36127822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 42903758 - 42903877
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  ||||||    
T  42903758 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 42903857  T
Q  201 accattcaaagccacattat 220  Q
    |||| ||||| |||||||||    
T  42903858 accaatcaaaaccacattat 42903877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 46389466 - 46389347
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  ||||||    
T  46389466 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 46389367  T
Q  201 accattcaaagccacattat 220  Q
    |||| ||||| |||||||||    
T  46389366 accaatcaaaaccacattat 46389347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 50480352 - 50480471
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  ||||||    
T  50480352 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 50480451  T
Q  201 accattcaaagccacattat 220  Q
    |||| ||||| |||||||||    
T  50480452 accaatcaaaaccacattat 50480471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 54386628 - 54386509
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  ||||||    
T  54386628 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 54386529  T
Q  201 accattcaaagccacattat 220  Q
    |||| ||||| |||||||||    
T  54386528 accaatcaaaaccacattat 54386509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 49144031 - 49144149
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||| ||||||||| ||||||  ||||||    
T  49144031 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaa-atattcaaaatgtgttattttgcc 49144129  T
Q  201 accattcaaagccacattat 220  Q
    |||| ||||| |||||||||    
T  49144130 accaatcaaaaccacattat 49144149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 34045880 - 34045762
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||| ||| ||||| ||||||  ||||||    
T  34045880 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaa-atactcaaaatgtgttattttgcc 34045782  T
Q  201 accattcaaagccacattat 220  Q
    |||| ||||| |||||||||    
T  34045781 accaatcaaaaccacattat 34045762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 46701593 - 46701712
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||  ||||| ||| ||  ||||||    
T  46701593 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatgctcaaaatgtcttattttgcc 46701692  T
Q  201 accattcaaagccacattat 220  Q
    |||| ||||| |||||||||    
T  46701693 accaatcaaaaccacattat 46701712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 108 - 210
Target Start/End: Complemental strand, 4178301 - 4178199
Alignment:
Q  108 ctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattc 207  Q
    ||||||||||||||||||||||| |||||  |||||||| |||||||||||||||||||||||| |||  |||||||||| | |||||||| ||||||||    
T  4178301 ctaactaaataatcaataaaattttcatttgggcattttgtcaaacactttgtgtgcaaagtatcaaaagtattcaaattatcttcatttgacaccattc 4178202  T
Q  208 aaa 210  Q
    |||    
T  4178201 aaa 4178199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 108 - 218
Target Start/End: Original strand, 31045169 - 31045279
Alignment:
Q  108 ctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattc 207  Q
    ||||||||||||| |||  |||| |||||  |||||||| |||||||||||||||||||||||| ||||||||||| ||||||||  |||| ||||||||    
T  31045169 ctaactaaataataaatgcaattctcattttggcattttgtcaaacactttgtgtgcaaagtatcaaacatattcacattgtgttattttgacaccattc 31045268  T
Q  208 aaagccacatt 218  Q
    ||| |||||||    
T  31045269 aaaaccacatt 31045279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 210
Target Start/End: Complemental strand, 4172303 - 4172201
Alignment:
Q  108 ctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattc 207  Q
    ||||||||||||||||||||||| |||||  |||||||| ||||||||||| |||||||||||| |||  |||||||||| | |||||||  ||||||||    
T  4172303 ctaactaaataatcaataaaattctcatttgggcattttgtcaaacactttttgtgcaaagtatcaaaagtattcaaattatcttcatttaacaccattc 4172204  T
Q  208 aaa 210  Q
    |||    
T  4172203 aaa 4172201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 182; Significance: 2e-98; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 54 - 251
Target Start/End: Complemental strand, 39948152 - 39947955
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  39948152 atacacttaaccaaactataattaacatcatttatatcatttccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaac 39948053  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  39948052 actttgtgtgcaaagtataaaacatattcaaattgtgttcttttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattc 39947955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 50 - 251
Target Start/End: Complemental strand, 28469196 - 28468996
Alignment:
Q  50 caaaatacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatc 149  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| |||||||| |||||||||    
T  28469196 caaaatacacttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatc 28469098  T
Q  150 aaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacat 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  28469097 aaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaattacat 28468998  T
Q  250 tc 251  Q
    ||    
T  28468997 tc 28468996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 54 - 251
Target Start/End: Complemental strand, 45429142 - 45428946
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| |||||||| |||||||||||||    
T  45429142 atacacttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaac 45429044  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||    
T  45429043 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaactacgtaggcaacaactacattc 45428946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 50 - 251
Target Start/End: Complemental strand, 17421122 - 17420922
Alignment:
Q  50 caaaatacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatc 149  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| |||||||| |||||||||    
T  17421122 caaaataaacttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatc 17421024  T
Q  150 aaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacat 249  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  17421023 aaacacttgatgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaacccacattatgatttaaacaacataggcaacaactacat 17420924  T
Q  250 tc 251  Q
    ||    
T  17420923 tc 17420922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 58 - 236
Target Start/End: Complemental strand, 21998737 - 21998560
Alignment:
Q  58 acttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactt 157  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  21998737 acttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacactt 21998639  T
Q  158 tgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatag 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21998638 tgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatag 21998560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 32955880 - 32956072
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    ||| ||||||||||||||||||||||    
T  32955880 atacactta-ccaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaa----attgtcattgaggcattttatcaaac 32955974  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||    
T  32955975 actttgcgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattataatttaaacaacataggcaacaagtacattc 32956072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 118 - 251
Target Start/End: Complemental strand, 25965308 - 25965175
Alignment:
Q  118 aatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacat 217  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25965308 aatcaataaaattatcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaacattcaaagccacat 25965209  T
Q  218 tatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||||||||||||| || ||||||||||    
T  25965208 tatgatttaaacaacataggaaacaactacattc 25965175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 29401160 - 29401291
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| ||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  29401160 atcatatccataagctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 29401259  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    ||||| |||||||||||||||| |||||||||    
T  29401260 tgttcttttgccaccattcaaaaccacattat 29401291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 154 - 251
Target Start/End: Complemental strand, 7185481 - 7185384
Alignment:
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7185481 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattc 7185384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 25515366 - 25515496
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    |||||||||||||||||| |||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |    
T  25515366 atcatttccataacctaaactaactcaataatcaatataattctcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaatcg 25515465  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    || || |||||||||||||||| |||||||||    
T  25515466 tgctc-tttgccaccattcaaaaccacattat 25515496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 36655906 - 36656037
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| |||||||||||| ||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  36655906 atcatatccataacctaaactaactaaataatcaataaaatgttcattgagacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 36656005  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    ||||| |||||||||||| ||| |||||||||    
T  36656006 tgttcttttgccaccattgaaaaccacattat 36656037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 45284683 - 45284558
Alignment:
Q  95 tccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttca 194  Q
    ||||||| |||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||| | ||| |||||||     
T  45284683 tccataatctaaactaactaaataatcaataaaattgtcattgagccattttatcaaacactttgtgtgcaaagtatcaaacatacttaaaatgtgttct 45284584  T
Q  195 tttgccaccattcaaagccacattat 220  Q
    |||||||||||||||| |||||||||    
T  45284583 tttgccaccattcaaaaccacattat 45284558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 45292046 - 45291921
Alignment:
Q  95 tccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttca 194  Q
    ||||||| |||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||| | ||| |||||||     
T  45292046 tccataatctaaactaactaaataatcaataaaattgtcattgagccattttatcaaacactttgtgtgcaaagtatcaaacatacttaaaatgtgttct 45291947  T
Q  195 tttgccaccattcaaagccacattat 220  Q
    |||||||||||||||| |||||||||    
T  45291946 tttgccaccattcaaaaccacattat 45291921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 10828581 - 10828712
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| |||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||| ||||||| ||||| ||    
T  10828581 atcatatccataacctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtccaaagtatcaaacatactcaaaatg 10828680  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
     |||| |||||||| ||||||| |||||||||    
T  10828681 cgttcttttgccacaattcaaaaccacattat 10828712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 20938401 - 20938282
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||| ||||||    
T  20938401 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgcc 20938302  T
Q  201 accattcaaagccacattat 220  Q
    |||||||||| |||||||||    
T  20938301 accattcaaaaccacattat 20938282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 45136824 - 45136956
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||           |||||||| ||||||||||||||||||||||    
T  45136824 atacatttaaccaaactataattaacatcatttctatcatttccataacctaaactaa-----------ataaaattgtcattgaggcattttatcaaac 45136912  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcattt 197  Q
    |||||||||||||||||||||| ||||| |||||||||||||||    
T  45136913 actttgtgtgcaaagtataaaatatatttaaattgtgttcattt 45136956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 3940297 - 3940416
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  ||||||    
T  3940297 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 3940396  T
Q  201 accattcaaagccacattat 220  Q
    |||| ||||| |||||||||    
T  3940397 accaatcaaaaccacattat 3940416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 5352470 - 5352351
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  ||||||    
T  5352470 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 5352371  T
Q  201 accattcaaagccacattat 220  Q
    |||| ||||| |||||||||    
T  5352370 accaatcaaaaccacattat 5352351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 15831633 - 15831514
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  |||||||||||| |||||||||||||||||| ||||||| ||||| ||||||  ||||||    
T  15831633 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaagactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 15831534  T
Q  201 accattcaaagccacattat 220  Q
    |||||||||| |||||||||    
T  15831533 accattcaaaaccacattat 15831514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 30496515 - 30496634
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  ||||||    
T  30496515 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 30496614  T
Q  201 accattcaaagccacattat 220  Q
    |||| ||||| |||||||||    
T  30496615 accaatcaaaaccacattat 30496634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 43979025 - 43978906
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  ||||||    
T  43979025 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 43978926  T
Q  201 accattcaaagccacattat 220  Q
    |||| ||||| |||||||||    
T  43978925 accaatcaaaaccacattat 43978906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 43539306 - 43539425
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  |||||||||||| || ||||||||||||||| ||||||| ||||| ||||||  ||||||    
T  43539306 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaaaacattgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 43539405  T
Q  201 accattcaaagccacattat 220  Q
    |||| ||||| ||| |||||    
T  43539406 accaatcaaaaccatattat 43539425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 22686934 - 22686858
Alignment:
Q  50 caaaatacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaa 127  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||| |||| ||||||||||||||| ||||    
T  22686934 caaaatacacttaaccaaactataattaacatcatttctaccatttccataa-ctaaactaactaaataatcactaaa 22686858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 251
Target Start/End: Original strand, 45137103 - 45137150
Alignment:
Q  204 attcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  45137103 attcaaggccacattatgatttaaataacataggcaagaactacattc 45137150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 31367513 - 31367427
Alignment:
Q  132 tcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacatt 218  Q
    ||||| |||||||||| |||||||||| |||||||| ||| |||| || |   ||| |||| ||||| ||||||||||| |||||||    
T  31367513 tcatttaggcattttaacaaacactttttgtgcaaaatatgaaacttaatatcattatgttgatttgacaccattcaaaaccacatt 31367427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 178; Significance: 4e-96; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 54 - 251
Target Start/End: Complemental strand, 43212057 - 43211860
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  43212057 atacacttaaccaaactataattaacatcatttatatcatttccttaacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaac 43211958  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  43211957 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttcccaccattcaaagccacattatgatttaaacaacataggcaacaactacattc 43211860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 5303742 - 5303939
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||| |||||||    
T  5303742 atacacttaaccaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaac 5303841  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  5303842 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagacaacaactacattc 5303939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 65 - 251
Target Start/End: Complemental strand, 39602256 - 39602070
Alignment:
Q  65 caaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgc 164  Q
    |||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  39602256 caaaatataattaacatcatttctatcatttccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgc 39602157  T
Q  165 aaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  39602156 aaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattc 39602070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 39846507 - 39846704
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||| ||| || ||||||||||    
T  39846507 atacacttaaccaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaataaaattgtcatggagacagtttatcaaac 39846606  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  39846607 actttgtgtacaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattc 39846704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 39938737 - 39938934
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||| |||||||| ||||||||||||     
T  39938737 atacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactacataatcaataaaattgtcattgagacattttatcaaat 39938836  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  39938837 actttgtgtgcaaagtataaaacttattcaaattgtgttcatttgccaccattcaaagccccattatgatttaaacaacataggcaacaactacattc 39938934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 54 - 251
Target Start/End: Complemental strand, 43188601 - 43188404
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||  |||||||||||||    
T  43188601 atacacttaatcaaactataattaacatcatttatatcatttccataacataaactaactaaataatcaataaaattgtcattgaaacattttatcaaac 43188502  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  43188501 actttgtatgcaaagtataaaacatattcaaatcgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagacaacaactacattc 43188404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 15036249 - 15036446
Alignment:
Q  54 atacacttaaccaaactataattaaca-tcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaa 152  Q
    ||||||||||||||||||||||||||  | |||| ||||||||||||||| ||| ||||||||||||||||||||||| |||||||| ||||||||||||    
T  15036249 atacacttaaccaaactataattaaccctaatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaa 15036347  T
Q  153 cactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15036348 cactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattc 15036446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 50 - 251
Target Start/End: Original strand, 489147 - 489347
Alignment:
Q  50 caaaatacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatc 149  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| |||||||| |||||||||    
T  489147 caaaataaacttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatc 489245  T
Q  150 aaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacat 249  Q
     ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||| | ||||||    
T  489246 gaacactttgtgtgcaaagtataaaacatatttaaattgtgttcatttgcaaccattcaaagccacattataatttaaactacataggcaacatctacat 489345  T
Q  250 tc 251  Q
    ||    
T  489346 tc 489347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 34822538 - 34822735
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||| |||||||    
T  34822538 atacacttaaccaaactataattaatatcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaac 34822637  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||   ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  34822638 actttgtgtgcagagtataaaacatatttaaattgtgttcatttgcagtcattcaaagccacattatgatttaaccaacataggcaacaactacattc 34822735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 89 - 251
Target Start/End: Complemental strand, 39252528 - 39252366
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39252528 atcatttccataacctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 39252429  T
Q  189 tgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    | ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  39252428 tattcatttgccaccattcaaagccacattatgatttaaacaacatatgcaacaactacattc 39252366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 50 - 251
Target Start/End: Original strand, 42485047 - 42485256
Alignment:
Q  50 caaaatacacttaaccaaactataattaacatcatttatatcatttc---------cataacctaagctaactaaataatcaataaaattatcattgagg 140  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||         |||||| ||| ||||||||||||||||||||||| ||||||||     
T  42485047 caaaataaacttaaccaaactataattaacatcatttctatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgaga 42485145  T
Q  141 cattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaa 240  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  42485146 cattttatcgaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattataatttaaactacataggcaa 42485245  T
Q  241 taactacattc 251  Q
     | ||||||||    
T  42485246 catctacattc 42485256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 50 - 251
Target Start/End: Complemental strand, 45064786 - 45064596
Alignment:
Q  50 caaaatacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatc 149  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| |||||||| |||||||||    
T  45064786 caaaatacacttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatc 45064688  T
Q  150 aaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacat 249  Q
    |||||||||||||||||          | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  45064687 aaacactttgtgtgcaa----------aaattcaaattgtgttcatttgccaccattcaaagccacattaagatttaaacaacataggcaacaactacat 45064598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 89 - 251
Target Start/End: Original strand, 40076806 - 40076968
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||||||  |||||||| |||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  40076806 atcatttctgtaacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaattataaaacatattcaaattg 40076905  T
Q  189 tgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  40076906 tgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacagctacattc 40076968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 54 - 220
Target Start/End: Complemental strand, 2984674 - 2984508
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    |||||||| | ||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||| |||| || |||||||||||||||||||    
T  2984674 atacactttatcaaactataattaacatcattttcatcatttccataacctaaactaactaaataatcaatataattgtcgttgaggcattttatcaaac 2984575  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattat 220  Q
    |||||||||||||||||| |||| ||||||||||||||| ||||| || |||||||| |||||||||    
T  2984574 actttgtgtgcaaagtatgaaacttattcaaattgtgtttatttggcatcattcaaaaccacattat 2984508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 41249610 - 41249791
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||| |||||| |||| |             
T  41249610 atacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactacataatcaataaaattgtcattgcggcaat--------- 41249700  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
           |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41249701 -------gtgcaaagtataaagcatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattc 41249791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 97 - 226
Target Start/End: Complemental strand, 37327292 - 37327163
Alignment:
Q  97 cataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatt 196  Q
    |||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37327292 cataacctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatt 37327193  T
Q  197 tgccaccattcaaagccacattatgattta 226  Q
    ||||||||||||||  |||||||| |||||    
T  37327192 tgccaccattcaaaatcacattatcattta 37327163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 35552182 - 35552051
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  35552182 atcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 35552083  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    ||||| |||||||||||||||| |||||||||    
T  35552082 tgttcttttgccaccattcaaaaccacattat 35552051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 20857802 - 20857671
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||| ||||| ||    
T  20857802 atcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacaatttgtgtgcaaagtatcaaacatactcaaaatg 20857703  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    ||||| ||||| |||||||||| |||||||||    
T  20857702 tgttcttttgcaaccattcaaaaccacattat 20857671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 24249999 - 24249868
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    |||||||||||||||||| || ||||||||||||||| |||| |||||| |||||||||||||| ||||| |||||||||||| ||||||||||||| ||    
T  24249999 atcatttccataacctaaactgactaaataatcaatataattctcattggggcattttatcaaatactttatgtgcaaagtatcaaacatattcaaaatg 24249900  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    || ||||||| ||||||||||| |||||||||    
T  24249899 tgctcatttgacaccattcaaaaccacattat 24249868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 94 - 220
Target Start/End: Complemental strand, 45128261 - 45128135
Alignment:
Q  94 ttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttc 193  Q
    ||||||||||||| |||||| ||||||||||| ||||  ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||  ||||||    
T  45128261 ttccataacctaaactaactcaataatcaatacaattcacattggggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaacgtgttc 45128162  T
Q  194 atttgccaccattcaaagccacattat 220  Q
     |||||||||||||||| |||||||||    
T  45128161 ttttgccaccattcaaaaccacattat 45128135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 25095 - 25214
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  ||||||    
T  25095 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 25194  T
Q  201 accattcaaagccacattat 220  Q
    |||| ||||| |||||||||    
T  25195 accaatcaaaaccacattat 25214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 1053029 - 1052910
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  ||||||    
T  1053029 acctaaactaactaaataatcaataaaattgtcattgatacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 1052930  T
Q  201 accattcaaagccacattat 220  Q
    |||| ||||| |||||||||    
T  1052929 accaatcaaaaccacattat 1052910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 23021889 - 23022008
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  ||||||    
T  23021889 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 23021988  T
Q  201 accattcaaagccacattat 220  Q
    |||| ||||| |||||||||    
T  23021989 accaatcaaaaccacattat 23022008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 26659951 - 26659832
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  ||||||    
T  26659951 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 26659852  T
Q  201 accattcaaagccacattat 220  Q
    |||| ||||| |||||||||    
T  26659851 accaatcaaaaccacattat 26659832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 89 - 192
Target Start/End: Original strand, 34371450 - 34371553
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| |||||||||||| |||||||||||||||| |||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  34371450 atcatatccataacctaaactaactaaataatcaaaaaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 34371549  T
Q  189 tgtt 192  Q
    ||||    
T  34371550 tgtt 34371553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 5677587 - 5677456
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    |||||||||||||||||| || |||  |||||||||| |||| |||||| |||||||||||||||||||| ||||||||  || ||||||| ||||| ||    
T  5677587 atcatttccataacctaaacttactcgataatcaatataattttcattggggcattttatcaaacactttctgtgcaaaacatcaaacatactcaaaatg 5677488  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    | ||| ||||| |||||||||| |||||||||    
T  5677487 tattcttttgctaccattcaaaaccacattat 5677456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 25864609 - 25864658
Alignment:
Q  202 ccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25864609 ccattcaaagccacattatgatttaaacaacataggcaacaactacattc 25864658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 22495415 - 22495305
Alignment:
Q  108 ctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattc 207  Q
    |||| ||||||||||||  |||| |||||  |||||||||||||| |   | |||||||||||| ||||||||||  |||||||| ||||| ||||||||    
T  22495415 ctaagtaaataatcaatgcaattttcatttgggcattttatcaaaaaacatttgtgcaaagtatcaaacatattctcattgtgttaatttgacaccattc 22495316  T
Q  208 aaagccacatt 218  Q
    ||| |||||||    
T  22495315 aaaaccacatt 22495305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 39252554 - 39252522
Alignment:
Q  54 atacacttaaccaaactataattaacatcattt 86  Q
    |||||||| ||||||||||||||||||||||||    
T  39252554 atacacttgaccaaactataattaacatcattt 39252522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 177; Significance: 2e-95; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 54 - 250
Target Start/End: Original strand, 31783249 - 31783445
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  31783249 atacacttaaccaaactataattaacatcatttatatcatttccataatctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaac 31783348  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacatt 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  31783349 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaagaacataggcaacaactacatt 31783445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 35258394 - 35258591
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    |||||||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||| |||| |||||||||||||| |||||||    
T  35258394 atacacttaatcaaactataattaacatcatttctatcatttctataacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaac 35258493  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  35258494 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactaaattc 35258591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 54 - 251
Target Start/End: Complemental strand, 45825429 - 45825231
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||| |||| |||||||||||||| |||||||    
T  45825429 atacacttaaccaaactataattaacatcatttctatcatttccataacctaaattaactaaataatcaatataattttcattgaggcatttgatcaaac 45825330  T
Q  154 actttgtgtgc-aaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  45825329 actttgtgtgcaaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacataggcaacaactacattc 45825231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 54 - 251
Target Start/End: Complemental strand, 51321266 - 51321069
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||| |||||||    
T  51321266 atacacttaaccaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaac 51321167  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||| ||||||||||    
T  51321166 actttgtgtgcaaaatataaaacatattcaaattgtgttcatttgccactattcaaagtcacattatgatttaaacaatataggcaacaactacattc 51321069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 50 - 251
Target Start/End: Complemental strand, 19925297 - 19925097
Alignment:
Q  50 caaaatacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatc 149  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| |||||||| |||||||||    
T  19925297 caaaataaacttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatc 19925199  T
Q  150 aaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacat 249  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| | ||||||    
T  19925198 gaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattataatttaaactacataggcaacatctacat 19925099  T
Q  250 tc 251  Q
    ||    
T  19925098 tc 19925097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 50 - 251
Target Start/End: Complemental strand, 30890616 - 30890416
Alignment:
Q  50 caaaatacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatc 149  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| |||||||| |||||||||    
T  30890616 caaaataaacttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatc 30890518  T
Q  150 aaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacat 249  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| | ||||||    
T  30890517 gaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattataatttaaactacataggcaacatctacat 30890418  T
Q  250 tc 251  Q
    ||    
T  30890417 tc 30890416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 19527064 - 19527261
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||||||  |||||| ||||||||||||||| | ||||||||||||||||||||    
T  19527064 atacacttaaccaaactataactaacatcatttctatcattttcataacctaaattaactacataatcaataaaattgttattgaggcattttatcaaac 19527163  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  19527164 actttgtgtgcaaaacataaaacatattcaaattgtgtccatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattc 19527261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 49857467 - 49857661
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |   |||||||||| |||||||    
T  49857467 atacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaac 49857563  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||    
T  49857564 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattctcatttaaacaacataggcaacaactacattc 49857661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 23275625 - 23275822
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||| ||| || ||||||||||||||| |||| |||||||||||||| |||||||    
T  23275625 atacacttaaccaaactata-ttaacatcatttctatcatttccataacttaaactgactaaataatcaatataattttcattgaggcatttgatcaaac 23275723  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcca-ccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  23275724 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgtcacccattcaaagtcacattatgatttaaacaacataggcaacaactacattc 23275822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 54 - 251
Target Start/End: Complemental strand, 52802683 - 52802486
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||| ||||||||||||| |||||||| |||||||||||||    
T  52802683 atacacttaaccaaactataattaacatcatttctatcatttccatagcctaaactaactaaacaatcaataaaattgtcattgagacattttatcaaac 52802584  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||  |||||||||| |||||||||||| |||| ||||||||||    
T  52802583 actttgtgtgcaaagtataaaagatattcaaattgtgttattttgccaccattcaaaatcacattatgacttaaacaacataagcaacaactacattc 52802486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 22 - 251
Target Start/End: Complemental strand, 47502895 - 47502670
Alignment:
Q  22 catcatcattcttgtaacctaaactaaccaaaa--------tacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaact 113  Q
    |||||| ||||||||||||||||||||| ||||        |||||||||||||||||||||||||||||||| |||         |||||   ||||||    
T  47502895 catcataattcttgtaacctaaactaactaaaaaatcaatatacacttaaccaaactataattaacatcatttctat---------aacct---ctaact 47502808  T
Q  114 aaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagcc 213  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47502807 aaataatcaataaaattgtcattgaggcattttaccaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagcc 47502708  T
Q  214 acattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  47502707 acattatgatttaaacaacataggcaacaactacattc 47502670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 21141544 - 21141413
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  21141544 atcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 21141445  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    || || |||||||||||||||| |||||||||    
T  21141444 tgatcttttgccaccattcaaaaccacattat 21141413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 50343525 - 50343656
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  50343525 atcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 50343624  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    ||||| |||||||||||||||| ||| |||||    
T  50343625 tgttcttttgccaccattcaaaaccatattat 50343656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 97504 - 97635
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| ||||| ||    
T  97504 atcatatccataacctaaactaactaaataaacaataaaattatcattgaggcattttctcaaacactttgtgtacaaagtatcaaacatactcaaaatg 97603  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    || || |||||||||||||||| |||||||||    
T  97604 tgatcttttgccaccattcaaaaccacattat 97635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 2365741 - 2365622
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||| ||||||    
T  2365741 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgcc 2365642  T
Q  201 accattcaaagccacattat 220  Q
    |||||||||| |||||||||    
T  2365641 accattcaaaaccacattat 2365622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 19156520 - 19156401
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||| ||||||    
T  19156520 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgcc 19156421  T
Q  201 accattcaaagccacattat 220  Q
    |||||||||| |||||||||    
T  19156420 accattcaaaaccacattat 19156401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 47656386 - 47656256
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| ||||||||| || ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  47656386 atcatatccataaccaaa-ctaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 47656288  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    ||||| ||||||||||||||||  ||||||||    
T  47656287 tgttcttttgccaccattcaaaatcacattat 47656256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 2424924 - 2425053
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| |||||||||||| |||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  2424924 atcatatccataacctaaactaaataaataatcaataaaattgttattgaggcattttatcaaacactttgtgtgcaaagtataaaac--attcaaattg 2425021  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    |||| ||||| | |||||| || |||||||||    
T  2425022 tgtttatttggctccattccaaaccacattat 2425053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 22524650 - 22524521
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| ||||| | |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||     
T  22524650 atcatatccatgatctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtataaaac--attcaaatta 22524553  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    |||| ||||| | |||||| || |||||||||    
T  22524552 tgtttatttggctccattccaaaccacattat 22524521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 3731949 - 3732068
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  ||||||    
T  3731949 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 3732048  T
Q  201 accattcaaagccacattat 220  Q
    |||| ||||| |||||||||    
T  3732049 accaatcaaaaccacattat 3732068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 13639591 - 13639710
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  ||||||    
T  13639591 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 13639690  T
Q  201 accattcaaagccacattat 220  Q
    || ||||||| |||||||||    
T  13639691 acaattcaaaaccacattat 13639710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 109 - 220
Target Start/End: Original strand, 17514272 - 17514383
Alignment:
Q  109 taactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattca 208  Q
    ||||||||||||||||| |||| | |||  |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||    
T  17514272 taactaaataatcaatataatttttatttgggcattttatcaaacactttgtgtgcaaagaatcaaacatattcaaattgtgttcatttggcaccattca 17514371  T
Q  209 aagccacattat 220  Q
    || |||||||||    
T  17514372 aaaccacattat 17514383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 26876162 - 26876043
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  ||||||    
T  26876162 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 26876063  T
Q  201 accattcaaagccacattat 220  Q
    |||| ||||| |||||||||    
T  26876062 accaatcaaaaccacattat 26876043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 96 - 210
Target Start/End: Original strand, 38127045 - 38127160
Alignment:
Q  96 ccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtg-ttca 194  Q
    ||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||| | ||| |||| ||      
T  38127045 ccataacctaaactaactaagtaatcaataaaattttcattgagacattttatcaaacactttgtgtgcaaagtatcaaacatactaaaaatgtgttttt 38127144  T
Q  195 tttgccaccattcaaa 210  Q
    ||||||||||||||||    
T  38127145 tttgccaccattcaaa 38127160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 220
Target Start/End: Complemental strand, 8474259 - 8474171
Alignment:
Q  132 tcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattat 220  Q
    |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  |||||||||| ||||| |||||||||    
T  8474259 tcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccaccaatcaaaaccacattat 8474171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 23935581 - 23935650
Alignment:
Q  149 caaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacatt 218  Q
    ||||||||||| ||||||||||| |||| ||||   |||||||| ||||| ||||||||||| |||||||    
T  23935581 caaacactttgagtgcaaagtatgaaacttattaccattgtgttaatttgacaccattcaaaaccacatt 23935650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 29622105 - 29622142
Alignment:
Q  214 acattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  29622105 acattatgatttaaacaacataggcaacaactacattc 29622142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 16243106 - 16243165
Alignment:
Q  118 aatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaaca 177  Q
    ||||||| ||||  ||||| ||||||||||||||||||||||| ||||||  ||||||||    
T  16243106 aatcaatgaaatattcatttaggcattttatcaaacactttgtatgcaaaagataaaaca 16243165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 179
Target Start/End: Complemental strand, 25167023 - 25166976
Alignment:
Q  132 tcattgaggcattttatcaaacactttgtgtgcaaagtataaaacata 179  Q
    ||||| ||| |||||||||||||||||| ||||||||||| |||||||    
T  25167023 tcatttaggaattttatcaaacactttgagtgcaaagtatgaaacata 25166976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 210
Target Start/End: Complemental strand, 25147776 - 25147698
Alignment:
Q  132 tcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaa 210  Q
    ||||| ||| |||||| ||||||||||| ||||||||||| |||| ||||   |||||||| ||| | |||||||||||    
T  25147776 tcatttaggtattttaacaaacactttgagtgcaaagtatgaaacttattggcattgtgttaattggacaccattcaaa 25147698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 170; Significance: 2e-91; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 50 - 251
Target Start/End: Original strand, 8580023 - 8580223
Alignment:
Q  50 caaaatacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatc 149  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| |||||||| |||||||||    
T  8580023 caaaatacacttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatc 8580121  T
Q  150 aaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacat 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  8580122 aaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagctacattatgatttaaacaacataggcaacaactacat 8580221  T
Q  250 tc 251  Q
    ||    
T  8580222 tc 8580223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 54 - 251
Target Start/End: Complemental strand, 17658874 - 17658677
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||| |||||||    
T  17658874 atacacttaaccaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaac 17658775  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  17658774 actttgtatgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaaaccacattatgatttaaacaacataggccacaactacattc 17658677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 19228193 - 19228390
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    |||||||||| |||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||| |||| |||||||||||||| |||||||    
T  19228193 atacacttaatcaaactataattaacatcatttttatcattttcataacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaac 19228292  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  19228293 actttgtgtgcaaagtataaaacatattcaaattatgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattc 19228390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 54 - 251
Target Start/End: Complemental strand, 42537701 - 42537504
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| || | |||||||||||||| |||||||    
T  42537701 atacacttaaccaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataaatttcattgaggcatttgatcaaac 42537602  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  42537601 actttgtgtgcaaagtataaaacatattcaaattatgttcatttgccaccattcaaagccacattatgattttaacaacataggcaacaactacattc 42537504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 50 - 250
Target Start/End: Complemental strand, 28877198 - 28876999
Alignment:
Q  50 caaaatacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatc 149  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||| |||||||| |||||||||    
T  28877198 caaaatacacttaaccaaactataattaacatcatttctatcatttccataaccaaa-ctaactaaataatcaataaaattgtcattgagacattttatc 28877100  T
Q  150 aaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacat 249  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||    
T  28877099 aaacacttggtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaacccacattatgatttaaacaatataggcaacaactacat 28877000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 54 - 251
Target Start/End: Complemental strand, 38968650 - 38968452
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||| |||||||    
T  38968650 atacacttaaccaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaac 38968551  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattca-aagccacattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||| ||||||||||    
T  38968550 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcataagtcacattatgattttaacaacataggcaacaactacattc 38968452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 54 - 251
Target Start/End: Complemental strand, 7757876 - 7757679
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    |||||||||||||||||||||||   ||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  7757876 atacacttaaccaaactataatttctatcatttctatcatttccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaac 7757777  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||    
T  7757776 actttgtgtgcaaagtataaaacatgttcaaattgtgttcatttgccaccattcaaaaccacattataatttaaacaacataggcaacaactacattc 7757679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 8701745 - 8701942
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||| |||| |||||||||||||| |||||||    
T  8701745 atacacttaatcaaactataattaacatcatttctatcatttccataacctaaacaaactaaataatcaatataattttcattgaggcatttgatcaaac 8701844  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||    
T  8701845 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatatgcaactactacattc 8701942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 50 - 251
Target Start/End: Original strand, 28241317 - 28241517
Alignment:
Q  50 caaaatacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatc 149  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| |||||||| |||||||||    
T  28241317 caaaataaacttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatc 28241415  T
Q  150 aaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacat 249  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| | ||||||    
T  28241416 gaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattataatttaaactacataggcaacatctacat 28241515  T
Q  250 tc 251  Q
    ||    
T  28241516 tc 28241517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 42942008 - 42942204
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||    
T  42942008 atacacttaaccagactataattaacatcatttctatcatttccataacctaaactaactaaa-aatcaataaaattgtcattgaggcattttatcaaac 42942106  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  42942107 actttgtgtgcaaagtataaaacatattcaaattatgttcatttgccacaattcaaagccatattatgatttaaacagcataggcaacaactacattc 42942204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 512293 - 512490
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||| ||||||||||||||||||||| ||| |||| |||||||||| |||||||||||| ||||| |||| ||||||||| |||| |||||||    
T  512293 atacacttaactaaactataattaacatcatttctataattttcataacctaaactaactaaataagcaatataattttcattgaggtatttgatcaaac 512392  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  512393 actttgggtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagacaacaactacattc 512490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 108 - 250
Target Start/End: Original strand, 14264 - 14406
Alignment:
Q  108 ctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14264 ctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattc 14363  T
Q  208 aaagccacattatgatttaaacaacataggcaataactacatt 250  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  14364 aaagccacattatgatttaaacaacataggcaacaactacatt 14406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 5197490 - 5197359
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  5197490 atcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 5197391  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    ||||| |||||||||||||||| |||||||||    
T  5197390 tgttcttttgccaccattcaaaaccacattat 5197359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 87 - 220
Target Start/End: Original strand, 40624468 - 40624601
Alignment:
Q  87 atatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaat 186  Q
    |||| |||| ||||| |||| ||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40624468 atataattttcataatctaaactaactaaataatcaataaaattgttattaaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaat 40624567  T
Q  187 tgtgttcatttgccaccattcaaagccacattat 220  Q
    |||||||||||| ||||||||||| |||||||||    
T  40624568 tgtgttcatttgtcaccattcaaaaccacattat 40624601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 19040685 - 19040804
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| |||||||||||||||||||| || |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19040685 acctaaactaactaaataatcaataaatttgtcattgacacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 19040784  T
Q  201 accattcaaagccacattat 220  Q
    |||||||||| |||||||||    
T  19040785 accattcaaacccacattat 19040804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 92 - 220
Target Start/End: Complemental strand, 20422463 - 20422335
Alignment:
Q  92 atttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgt 191  Q
    ||||||||||||||| |||||||||||||||| | |||| |||||| ||||||||||||||||||||||||| ||||||| ||||||||||||| |||||    
T  20422463 atttccataacctaaactaactaaataatcaaaataattgtcattggggcattttatcaaacactttgtgtgaaaagtatcaaacatattcaaaatgtgt 20422364  T
Q  192 tcatttgccaccattcaaagccacattat 220  Q
    ||||||| ||||||| ||| | |||||||    
T  20422363 tcatttggcaccatttaaaactacattat 20422335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 27673228 - 27673340
Alignment:
Q  108 ctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattc 207  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||| ||| ||||||| ||||| ||||||| |||||||||||||    
T  27673228 ctaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaaatatcaaacatactcaaaatgtgttcttttgccaccattc 27673327  T
Q  208 aaagccacattat 220  Q
    ||| |||||||||    
T  27673328 aaaaccacattat 27673340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 30705641 - 30705522
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||| ||| ||||||| | ||| ||||||| ||||||    
T  30705641 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaaatatcaaacatactaaaaatgtgttcttttgcc 30705542  T
Q  201 accattcaaagccacattat 220  Q
    |||||| ||| |||||||||    
T  30705541 accattgaaaaccacattat 30705522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 170; Significance: 2e-91; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 21022410 - 21022606
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| |||||||| |||||||||||||    
T  21022410 atacacttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaac 21022508  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21022509 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattc 21022606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 54 - 251
Target Start/End: Complemental strand, 51683754 - 51683557
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||| |||||||    
T  51683754 atacacttaaccaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaac 51683655  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  51683654 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagacaacaactacattc 51683557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 37021604 - 37021801
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||    
T  37021604 atacacttaaccaaactataattaacatcatttctatcattttcataacctaaactaactaaataatcaataaaattgtcattgaagcattttatcaaac 37021703  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  37021704 actttgtgtgcaaagtataaaagatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatatgcaacaactacattc 37021801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 54 - 251
Target Start/End: Complemental strand, 50275286 - 50275089
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||    
T  50275286 atacatttaaccaaactataattaacatcatttctatcatttccataacctaaactaactacataatcaataaaattgtcattgaggcattttatcaaac 50275187  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  50275186 actttgtgtgcaaagcataaaacatattcaaattgtgttcatttgccaccattcaaagccacattctgatttaaacaacataggcaacaactacattc 50275089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 50 - 251
Target Start/End: Original strand, 30726259 - 30726459
Alignment:
Q  50 caaaatacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatc 149  Q
    ||||||| ||||||||||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| |||||||| |||||||||    
T  30726259 caaaataaacttaaccaaagtataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatc 30726357  T
Q  150 aaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacat 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  30726358 aaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaactacataggcaacaactacat 30726457  T
Q  250 tc 251  Q
    ||    
T  30726458 tc 30726459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 50 - 251
Target Start/End: Original strand, 40357798 - 40357998
Alignment:
Q  50 caaaatacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatc 149  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| |||||||| |||||||||    
T  40357798 caaaatacacttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatc 40357896  T
Q  150 aaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacat 249  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  40357897 aaacacttggtgtgcaaagtataaaacatattcaaactgtgttcatttgccaccattcaaatccacattatgatttaaacaacataggcaacaactacat 40357996  T
Q  250 tc 251  Q
    ||    
T  40357997 tc 40357998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 48256092 - 48256289
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||| |||| |||||||||||||| |||||||    
T  48256092 atacacttaaccaaactataattaacatcatttctatcatttccataacttaaactaactaaataatcaatataattttcattgaggcatttgatcaaac 48256191  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  48256192 actttgtgtgcaaagtataaaacatattcaaattgttttcatttgccaccattcaaagccacattatgatttaaactacataggcaacaactacattc 48256289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 50 - 251
Target Start/End: Original strand, 1089102 - 1089302
Alignment:
Q  50 caaaatacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatc 149  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| |||||||| |||||||||    
T  1089102 caaaataaacttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatc 1089200  T
Q  150 aaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacat 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||| | ||||||    
T  1089201 aaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattattatttaaactacatatgcaacatctacat 1089300  T
Q  250 tc 251  Q
    ||    
T  1089301 tc 1089302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 55407308 - 55407505
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| ||| |||||||||  |||||||    
T  55407308 atacacttaacgaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattttcaatgaggcattcgatcaaac 55407407  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  55407408 attttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacataggcaacaactacattc 55407505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 50 - 251
Target Start/End: Original strand, 1308632 - 1308832
Alignment:
Q  50 caaaatacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatc 149  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| |||||||| |||||||||    
T  1308632 caaaataaacttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatc 1308730  T
Q  150 aaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacat 249  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||| | ||||||    
T  1308731 gaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattataatttaaactacatatgcaacatctacat 1308830  T
Q  250 tc 251  Q
    ||    
T  1308831 tc 1308832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 54 - 251
Target Start/End: Complemental strand, 50902031 - 50901835
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||| ||||||||||||| |||||||  |||||||||||||    
T  50902031 atacacttaaccaaactataattaacatcatttctatcatttccataacttaaactaactaaa-aatcaataaaattgtcattgaaacattttatcaaac 50901933  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||| ||| ||||||||||    
T  50901932 actttgtgtgcaaaatataaaacatattcaaattgtgttcatttaacaccattcaaagccacattatgaattaaacaacatagacaacaactacattc 50901835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 97 - 250
Target Start/End: Complemental strand, 68100 - 67947
Alignment:
Q  97 cataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatt 196  Q
    |||||||||| |||||||||||||||||| |||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  68100 cataacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttatgtgcaaagtataaaacatattcaaattgtgttcatt 68001  T
Q  197 tgccaccattcaaagccacattatgatttaaacaacataggcaataactacatt 250  Q
    ||| |||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  68000 tgctaccattcaaagccacattatcatttaaacaacataggcaacaactacatt 67947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 97 - 251
Target Start/End: Complemental strand, 46436753 - 46436599
Alignment:
Q  97 cataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatt 196  Q
    |||||||||| |||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46436753 cataacctaaactaactaaataatcaataaaattgccattgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatt 46436654  T
Q  197 tgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||||| | ||||| ||| ||||||||| |||| |||| ||||||||||    
T  46436653 tgccaccattcagaaccacaatatcatttaaacagcataagcaacaactacattc 46436599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 54 - 220
Target Start/End: Original strand, 11050044 - 11050210
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    |||||||| | |||||||| ||||||||| | |  |||||||||||||||||| |||||||||||||||||| |||| ||||||| |||||||||||||     
T  11050044 atacactttatcaaactatcattaacatcctctccatcatttccataacctaaactaactaaataatcaatataattttcattgatgcattttatcaaat 11050143  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattat 220  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||    
T  11050144 actttgtgtgcaaagtatcaaacatattcaaattgtgttcatttggcaccattcaaaaccacattat 11050210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 21538008 - 21538139
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  21538008 atcatttccataacctaaactaactaaataatcaatataattatcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacagattcaaattg 21538107  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    |||||||||| || |||||||| |||||||||    
T  21538108 tgttcatttggcatcattcaaaaccacattat 21538139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 50023099 - 50023230
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  50023099 atcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 50023198  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    ||||| |||||||||||||||| |||||||||    
T  50023199 tgttcttttgccaccattcaaaaccacattat 50023230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 65 - 218
Target Start/End: Complemental strand, 14315925 - 14315772
Alignment:
Q  65 caaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgc 164  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||| ||||||||||| |||| |||||  |||||||| |||||||||||| ||||    
T  14315925 caaactataattaacatcatttcaatcatttccataacctaaactaactcaataatcaatacaattttcatttgggcattttgtcaaacactttgcgtgc 14315826  T
Q  165 aaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacatt 218  Q
    ||||||||||||||| ||||| |||||||||||| ||||||||||| |||||||    
T  14315825 aaagtataaaacatactcaaaatgtgttcatttggcaccattcaaaaccacatt 14315772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 10752983 - 10753114
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    |||||||| ||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |    
T  10752983 atcatttcaataacctaaactaattaaataatcaatataattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatatttaaagag 10753082  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    ||| |||||||||||||||||| |||||||||    
T  10753083 tgtccatttgccaccattcaaaaccacattat 10753114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 10966752 - 10966883
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    |||||||| ||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |    
T  10966752 atcatttcaataacctaaactaattaaataatcaatataattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatatttaaagag 10966851  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    ||| |||||||||||||||||| |||||||||    
T  10966852 tgtccatttgccaccattcaaaaccacattat 10966883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 50030217 - 50030348
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| |||||||||||| ||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  50030217 atcatatccataacctaaactaactaaataatcagtaaaattgtcattgatgcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 50030316  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    ||||| |||||||||||||||| |||||||||    
T  50030317 tgttcttttgccaccattcaaaaccacattat 50030348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 41798570 - 41798682
Alignment:
Q  108 ctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattc 207  Q
    |||||||||||||||||||| || || ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41798570 ctaactaaataatcaataaatttgtcgttgacacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgctaccattc 41798669  T
Q  208 aaagccacattat 220  Q
    ||| |||||||||    
T  41798670 aaacccacattat 41798682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 9892836 - 9892955
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||| ||||||    
T  9892836 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgcc 9892935  T
Q  201 accattcaaagccacattat 220  Q
    |||||||||| |||||||||    
T  9892936 accattcaaaaccacattat 9892955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 89 - 218
Target Start/End: Complemental strand, 14297652 - 14297523
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    |||||||||||||||||| |||||| ||||||||||| |||| |||||  |||||||| |||||||||||| ||||||||||||||||||| ||||| ||    
T  14297652 atcatttccataacctaaactaactcaataatcaatacaattttcatttgggcattttgtcaaacactttgcgtgcaaagtataaaacatactcaaaatg 14297553  T
Q  189 tgttcatttgccaccattcaaagccacatt 218  Q
    |||||||||| ||||||||||| |||||||    
T  14297552 tgttcatttggcaccattcaaaaccacatt 14297523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 89 - 218
Target Start/End: Original strand, 41933179 - 41933308
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||||||||||| |||| |||||| ||||||||||| |||| |||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||      
T  41933179 atcatttccataatctaaactaactcaataatcaatataattttcattggggctttttatcaaacactttgtgtgcaaagtatcaaacatattcaaataa 41933278  T
Q  189 tgttcatttgccaccattcaaagccacatt 218  Q
    | |||||||| ||||||||||| |||||||    
T  41933279 tcttcatttgacaccattcaaaaccacatt 41933308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 3184473 - 3184342
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| ||||||||| || ||||||||||||  ||||||||| ||||||||||||||| |||||||||||| ||||||||||| ||||||| ||||| ||    
T  3184473 atcatatccataacccaaactaactaaataaaaaataaaattgtcattgaggcattttctcaaacactttgggtgcaaagtatcaaacatactcaaaatg 3184374  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    || || |||||||||||||||| |||||||||    
T  3184373 tgatcttttgccaccattcaaaaccacattat 3184342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 3185440 - 3185571
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| ||||||||| || ||||||||||||  ||||||||| ||||||||||||||| |||||||||||| ||||||||||| ||||||| ||||| ||    
T  3185440 atcatatccataacccaaactaactaaataaaaaataaaattgtcattgaggcattttctcaaacactttgggtgcaaagtatcaaacatactcaaaatg 3185539  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    || || |||||||||||||||| |||||||||    
T  3185540 tgatcttttgccaccattcaaaaccacattat 3185571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 3185648 - 3185779
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| ||||||||| || ||||||||||||  ||||||||| ||||||||||||||| |||||||||||| ||||||||||| ||||||| ||||| ||    
T  3185648 atcatatccataacccaaactaactaaataaaaaataaaattgtcattgaggcattttctcaaacactttgggtgcaaagtatcaaacatactcaaaatg 3185747  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    || || |||||||||||||||| |||||||||    
T  3185748 tgatcttttgccaccattcaaaaccacattat 3185779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 6181358 - 6181477
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  ||||||    
T  6181358 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 6181457  T
Q  201 accattcaaagccacattat 220  Q
    |||| ||||| |||||||||    
T  6181458 accaatcaaaaccacattat 6181477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 49090925 - 49090806
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  ||||||    
T  49090925 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 49090826  T
Q  201 accattcaaagccacattat 220  Q
    |||| ||||| |||||||||    
T  49090825 accaatcaaaaccacattat 49090806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 49165538 - 49165419
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||| ||| ||||||| ||||| ||||||  ||||||    
T  49165538 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaactatcaaacatactcaaaatgtgttattttgcc 49165439  T
Q  201 accattcaaagccacattat 220  Q
    |||||||||| |||||||||    
T  49165438 accattcaaaaccacattat 49165419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 97 - 210
Target Start/End: Complemental strand, 30704532 - 30704419
Alignment:
Q  97 cataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatt 196  Q
    |||||||||| ||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||| ||||||| | ||| ||||||| ||    
T  30704532 cataacctaaactaactaaataatcaataaaattgtcattgagatattttatcaaacactttgtgtgcaaagtatcaaacatactaaaaatgtgttcttt 30704433  T
Q  197 tgccaccattcaaa 210  Q
    | ||||||||||||    
T  30704432 tcccaccattcaaa 30704419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 44679631 - 44679762
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| || ||||||||| ||||||||||||||||| ||||  |||||||  ||||||||||||||||||||||||||| ||| ||||||| ||||| ||    
T  44679631 atcatatctataacctaaactaactaaataatcaatgaaatggtcattgaaacattttatcaaacactttgtgtgcaaaatatcaaacatactcaaaatg 44679730  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    ||||| ||||||||||||||||  ||||||||    
T  44679731 tgttcttttgccaccattcaaaatcacattat 44679762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 89 - 218
Target Start/End: Original strand, 11083562 - 11083691
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||||| |||||||||| |||||| |||||||| || |||| |||||  |||||||| ||||||||||||||||||||| || ||||||| ||||| ||    
T  11083562 atcattttcataacctaaactaactcaataatcagtacaattttcatttgggcattttgtcaaacactttgtgtgcaaagcatcaaacatactcaaaatg 11083661  T
Q  189 tgttcatttgccaccattcaaagccacatt 218  Q
    |||||||||| ||||||||||| |||||||    
T  11083662 tgttcatttgacaccattcaaaaccacatt 11083691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 31422203 - 31422083
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttat-caaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgc 199  Q
    |||||| ||||||||||||||||||||||| |||||||  |||||||| ||||||||||||||||||||||| ||||||| ||||| ||||||  |||||    
T  31422203 acctaaactaactaaataatcaataaaattgtcattgacacattttattcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgc 31422104  T
Q  200 caccattcaaagccacattat 220  Q
    ||||| ||||| |||||||||    
T  31422103 caccaatcaaaaccacattat 31422083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 100 - 220
Target Start/End: Complemental strand, 50193985 - 50193864
Alignment:
Q  100 aacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtg-ttcatttg 198  Q
    ||||||| |||| |||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||| ||||||| ||||| |||| ||  ||||    
T  50193985 aacctaaactaagtaaataatcaataaaattgtcattgagacattttatcaaacactttatgtgcaaagtatcaaacatactcaaaatgtgttttttttg 50193886  T
Q  199 ccaccattcaaagccacattat 220  Q
    |||| ||||||| |||||||||    
T  50193885 ccactattcaaaaccacattat 50193864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 210
Target Start/End: Original strand, 4719953 - 4720055
Alignment:
Q  108 ctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattc 207  Q
    |||| ||||||||||||  |||| |||||  |||||||| |||||||||||||||||||||||| ||||||||||  |||||||| ||||| ||||||||    
T  4719953 ctaagtaaataatcaatgcaattttcatttgggcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacaccattc 4720052  T
Q  208 aaa 210  Q
    |||    
T  4720053 aaa 4720055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 166; Significance: 6e-89; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 6320084 - 6320281
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||| |||||||    
T  6320084 atacacttaaccaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaac 6320183  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  6320184 gctttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacataggcaacaactacattc 6320281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 54 - 251
Target Start/End: Complemental strand, 31769257 - 31769060
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| || |||||||| |||||||||||||    
T  31769257 atacacttaaccaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaataaatttgtcattgagacattttatcaaac 31769158  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||    
T  31769157 actttgtgtgcaaagtataaaacatattcaaattgtgttcttttgccaccattcaaaaccacattatgatttaaacaacataagcaacaactacattc 31769060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 54 - 251
Target Start/End: Original strand, 24088303 - 24088500
Alignment:
Q  54 atacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaac 153  Q
    |||||| ||| |||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||| ||||| |||||||    
T  24088303 atacacctaatcaaactatcattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgagacatttgatcaaac 24088402  T
Q  154 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||    
T  24088403 actttgtgtacaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatcatttaaacaacatagacaacaactacattc 24088500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 24722445 - 24722314
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| |||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  24722445 atcatatccataacctaaactaactaaataatcaataaaattgtcattgacgcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 24722346  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    ||||| |||| |||||||||||  ||||||||    
T  24722345 tgttcttttgacaccattcaaaaacacattat 24722314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 108 - 220
Target Start/End: Complemental strand, 21601102 - 21600990
Alignment:
Q  108 ctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattc 207  Q
    |||||||||||||||||| |||| |||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  21601102 ctaactaaataatcaatataattctcatttgggcattttatcaaacactttgtgtgcaaagtatcaaacatattcaaattgtgttcatttgtcaccattc 21601003  T
Q  208 aaagccacattat 220  Q
    ||| |||||||||    
T  21601002 aaaaccacattat 21600990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 3501686 - 3501555
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| |||||||||||| |||||||||||| |||||||||| || |||||||||||| |||||||||||||||||||||||| ||||||| ||||| ||    
T  3501686 atcatatccataacctaaactaactaaataaacaataaaattgtccttgaggcattttctcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 3501587  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    || || |||||||||||||||| |||||||||    
T  3501586 tgatcttttgccaccattcaaaaccacattat 3501555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 26423514 - 26423384
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| |||||||| ||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  26423514 atcatatccataacataaactaactaaataaacaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 26423415  T
Q  189 tgttcatttgccaccattcaaagccacatta 219  Q
    || || |||||||||||||||| ||| ||||    
T  26423414 tgatcttttgccaccattcaaaaccatatta 26423384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 6201653 - 6201534
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  ||||||    
T  6201653 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 6201554  T
Q  201 accattcaaagccacattat 220  Q
    |||| ||||| |||||||||    
T  6201553 accaatcaaaaccacattat 6201534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 11688620 - 11688501
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  ||||||    
T  11688620 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 11688521  T
Q  201 accattcaaagccacattat 220  Q
    |||| ||||| |||||||||    
T  11688520 accaatcaaaaccacattat 11688501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 22301685 - 22301566
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  ||||||    
T  22301685 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 22301586  T
Q  201 accattcaaagccacattat 220  Q
    || ||||||| |||||||||    
T  22301585 acaattcaaaaccacattat 22301566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 30829220 - 30829339
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||  ||||||    
T  30829220 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 30829319  T
Q  201 accattcaaagccacattat 220  Q
    |||| ||||| |||||||||    
T  30829320 accaatcaaaaccacattat 30829339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 27617220 - 27617101
Alignment:
Q  101 acctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgcc 200  Q
    |||||| |||||||||||||||||||| || |||||||  ||||||||||||||||||||||||||||||| ||||||| ||||| ||| ||| ||||||    
T  27617220 acctaaactaactaaataatcaataaatttgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtattcttttgcc 27617121  T
Q  201 accattcaaagccacattat 220  Q
    |||||||||| ||| |||||    
T  27617120 accattcaaaaccatattat 27617101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 65 - 208
Target Start/End: Complemental strand, 3381313 - 3381182
Alignment:
Q  65 caaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgc 164  Q
    ||||||||||||||||||||||  |||||||||||||| ||| |||| ||||||||||            ||||||||||||||||| ||||||||||||    
T  3381313 caaactataattaacatcattttaatcatttccataacataaactaattaaataatca------------ttgaggcattttatcaaccactttgtgtgc 3381226  T
Q  165 aaagtataaaacatattcaaattgtgttcatttgccaccattca 208  Q
    ||  |||||||||||||||||||||||||||||| |||||||||    
T  3381225 aatatataaaacatattcaaattgtgttcatttgacaccattca 3381182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 158; Significance: 4e-84; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 50 - 251
Target Start/End: Original strand, 246 - 446
Alignment:
Q  50 caaaatacacttaaccaaactataattaacatcatttatatcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatc 149  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||| ||||||||||||| ||||||||| |||||||| |||||||||    
T  246 caaaatacacttaaccaaactataattaacatcatttctatcattttcataac-taaactaactaaataattaataaaattgtcattgagacattttatc 344  T
Q  150 aaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacat 249  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  345 aaacacgttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaactacataggcaacaactacat 444  T
Q  250 tc 251  Q
    ||    
T  445 tc 446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 99 - 251
Target Start/End: Complemental strand, 7925 - 7773
Alignment:
Q  99 taacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttg 198  Q
    |||||||| ||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7925 taacctaaactaactaaaaaatcaataaaattgtcattgaggcattttatcaaatactttgtgtgcaaagtataaaacatattcaaattgtgttcatttg 7826  T
Q  199 ccaccattcaaagccacattatgatttaaacaacataggcaataactacattc 251  Q
    ||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7825 ccatcattcaaagccacattatgatttaaacaacataggcaacaactacattc 7773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 18489 - 18619
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||| ||||| ||    
T  18489 atcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgcgtgcaaagtatcaaacatactcaaaatg 18588  T
Q  189 tgttcatttgccaccattcaaagccacatta 219  Q
    ||||| |||||||||||||||| ||||||||    
T  18589 tgttcttttgccaccattcaaaaccacatta 18619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 97 - 199
Target Start/End: Complemental strand, 10863 - 10761
Alignment:
Q  97 cataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatt 196  Q
    |||||||||| |||||||||||||||||| |||| |||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10863 cataacctaaactaactaaataatcaatataattgtcattgagacattttttcaaacactttgtgtgtaaagtataaaacatattcaaattgtgttcatt 10764  T
Q  197 tgc 199  Q
    |||    
T  10763 tgc 10761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 4210 - 4341
Alignment:
Q  89 atcatttccataacctaagctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 188  Q
    ||||||| |||| ||||| |||||| ||||||||||| |||| |||||| |||| ||||||||||||||||||||||||  || ||||||| ||||| ||    
T  4210 atcattttcataccctaaactaactcaataatcaatataattctcattggggcactttatcaaacactttgtgtgcaaaacatcaaacatactcaaaatg 4309  T
Q  189 tgttcatttgccaccattcaaagccacattat 220  Q
    ||||| |||||||||||| ||| |||||||||    
T  4310 tgttcttttgccaccattaaaaaccacattat 4341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 246228 - 246180
Alignment:
Q  132 tcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatat 180  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  246228 tcatttaggcattttatcaaacactttgggtgcaaagtataaaacatat 246180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 218
Target Start/End: Original strand, 251051 - 251161
Alignment:
Q  108 ctaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattc 207  Q
    |||| ||||||||||||  |||| |||||   ||||||| |||| |||||| |||| ||| ||| ||||||||||  |||||||| ||||| ||||||||    
T  251051 ctaagtaaataatcaatgcaattttcatttgagcattttgtcaatcactttatgtgtaaaatatcaaacatattcttattgtgttaatttgacaccattc 251150  T
Q  208 aaagccacatt 218  Q
    ||| |||||||    
T  251151 aaaaccacatt 251161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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