View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0708_low_39 (Length: 211)
Name: NF0708_low_39
Description: NF0708
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0708_low_39 |
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Alignment Details
Target: chr3 (Bit Score: 130; Significance: 1e-67; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 38 - 175
Target Start/End: Complemental strand, 31784987 - 31784850
Alignment:
| Q |
38 |
caatttcaacactctatcatcaagggaatcaaaatcatatggtttaaaaacaactgtttcatcaacctgattattcaaatcttgcaaccaaaggttttgg |
137 |
Q |
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| T |
31784987 |
caatttcaacactctatcatcaagggaatcaaaatcatatggtttaaaaacaactgtttcatcaacctgattatacaaatcttgcaaccaaaggttttgg |
31784888 |
T |
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| Q |
138 |
ttctcagttgagacatgttcaaagttttcatcatctgt |
175 |
Q |
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| T |
31784887 |
ttctcagttgagacatgttcaaagtttccatcatctgt |
31784850 |
T |
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