View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0711_high_17 (Length: 286)

Name: NF0711_high_17
Description: NF0711
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0711_high_17
NF0711_high_17
[»] chr7 (71 HSPs)
chr7 (174-276)||(3687608-3687710)
chr7 (173-271)||(9412281-9412380)
chr7 (172-228)||(44600135-44600191)
chr7 (174-228)||(44599489-44599543)
chr7 (174-231)||(13772898-13772955)
chr7 (171-231)||(9412020-9412080)
chr7 (172-228)||(37972396-37972452)
chr7 (173-228)||(10533033-10533088)
chr7 (173-228)||(13863312-13863367)
chr7 (173-228)||(37889259-37889314)
chr7 (174-228)||(9035293-9035347)
chr7 (174-228)||(37888833-37888887)
chr7 (171-228)||(20419324-20419381)
chr7 (172-228)||(3205093-3205149)
chr7 (173-229)||(9034866-9034922)
chr7 (172-220)||(13863964-13864012)
chr7 (172-228)||(17156965-17157021)
chr7 (172-228)||(22740154-22740210)
chr7 (172-224)||(29292920-29292972)
chr7 (173-228)||(8643766-8643821)
chr7 (173-228)||(13772640-13772695)
chr7 (177-228)||(20418891-20418942)
chr7 (174-231)||(3687353-3687411)
chr7 (173-222)||(23686723-23686772)
chr7 (177-228)||(18863970-18864021)
chr7 (174-225)||(29293349-29293400)
chr7 (173-228)||(37971959-37972014)
chr7 (173-228)||(46816311-46816366)
chr7 (175-225)||(5735253-5735303)
chr7 (174-228)||(13741557-13741611)
chr7 (172-226)||(38826915-38826969)
chr7 (171-228)||(13744233-13744289)
chr7 (175-231)||(8953886-8953941)
chr7 (172-228)||(16198977-16199033)
chr7 (174-226)||(18925062-18925114)
chr7 (174-228)||(3204669-3204721)
chr7 (178-228)||(18925229-18925280)
chr7 (177-231)||(27096168-27096223)
chr7 (177-231)||(27182080-27182135)
chr7 (176-231)||(29291808-29291863)
chr7 (174-269)||(29292001-29292095)
chr7 (173-228)||(33628660-33628715)
chr7 (173-227)||(6908212-6908265)
chr7 (177-227)||(6908485-6908534)
chr7 (177-231)||(27096339-27096392)
chr7 (177-231)||(27181911-27181964)
chr7 (172-214)||(34235736-34235778)
chr7 (172-222)||(42418589-42418639)
chr7 (174-228)||(48359320-48359373)
chr7 (169-228)||(5349733-5349789)
chr7 (173-226)||(18864404-18864456)
chr7 (174-227)||(23686421-23686473)
chr7 (171-228)||(30857904-30857961)
chr7 (176-229)||(34235977-34236030)
chr7 (174-227)||(35079960-35080012)
chr7 (174-222)||(27096047-27096094)
chr7 (174-222)||(27182209-27182256)
chr7 (177-229)||(42419028-42419079)
chr7 (181-227)||(5735382-5735429)
chr7 (169-267)||(8953597-8953693)
chr7 (177-226)||(15567276-15567322)
chr7 (177-228)||(22740591-22740641)
chr7 (175-228)||(18925322-18925373)
chr7 (178-231)||(38191387-38191440)
chr7 (175-229)||(39983700-39983754)
chr7 (177-222)||(5735553-5735598)
chr7 (179-227)||(6908391-6908440)
chr7 (171-228)||(15566989-15567046)
chr7 (171-228)||(36527381-36527437)
chr7 (171-224)||(38191259-38191312)
chr7 (174-227)||(38191566-38191619)
[»] chr1 (76 HSPs)
chr1 (172-276)||(47955304-47955409)
chr1 (174-276)||(41082909-41083011)
chr1 (171-228)||(8108993-8109050)
chr1 (171-228)||(49284406-49284463)
chr1 (176-276)||(17518555-17518653)
chr1 (166-269)||(22149659-22149761)
chr1 (174-228)||(48190771-48190825)
chr1 (171-228)||(39692000-39692057)
chr1 (171-231)||(13589656-13589715)
chr1 (173-228)||(32163043-32163098)
chr1 (173-228)||(44911024-44911079)
chr1 (173-228)||(48191355-48191410)
chr1 (174-228)||(9347126-9347180)
chr1 (173-231)||(47955605-47955663)
chr1 (173-263)||(31848158-31848247)
chr1 (171-263)||(22149400-22149490)
chr1 (177-228)||(50430081-50430132)
chr1 (177-231)||(1176839-1176893)
chr1 (174-228)||(6002237-6002291)
chr1 (177-263)||(8108724-8108810)
chr1 (174-228)||(48105116-48105170)
chr1 (171-224)||(27172545-27172598)
chr1 (171-276)||(31847892-31847997)
chr1 (171-228)||(48104675-48104732)
chr1 (172-228)||(4692433-4692489)
chr1 (177-225)||(46823846-46823894)
chr1 (176-228)||(50526472-50526524)
chr1 (175-226)||(13918869-13918920)
chr1 (173-228)||(19008750-19008805)
chr1 (174-229)||(20371352-20371406)
chr1 (173-228)||(26815119-26815174)
chr1 (173-228)||(28633719-28633774)
chr1 (177-228)||(28634157-28634208)
chr1 (172-223)||(50615238-50615289)
chr1 (172-223)||(50623066-50623117)
chr1 (174-228)||(6703894-6703948)
chr1 (174-228)||(13918446-13918500)
chr1 (174-228)||(26814694-26814748)
chr1 (174-228)||(27172116-27172169)
chr1 (173-227)||(39690793-39690847)
chr1 (173-231)||(41083208-41083265)
chr1 (172-226)||(42611183-42611237)
chr1 (177-230)||(1177016-1177069)
chr1 (174-227)||(20480613-20480665)
chr1 (176-228)||(6002894-6002946)
chr1 (171-223)||(19007732-19007783)
chr1 (172-228)||(20480166-20480221)
chr1 (172-228)||(46824278-46824334)
chr1 (173-228)||(9347551-9347605)
chr1 (174-224)||(1176717-1176766)
chr1 (173-231)||(17518302-17518359)
chr1 (174-228)||(21687025-21687079)
chr1 (177-227)||(44911438-44911488)
chr1 (174-224)||(49318170-49318219)
chr1 (174-228)||(50615621-50615674)
chr1 (174-228)||(50623449-50623502)
chr1 (173-226)||(6703459-6703512)
chr1 (171-228)||(33085668-33085725)
chr1 (177-226)||(42611616-42611665)
chr1 (177-224)||(31848019-31848067)
chr1 (175-226)||(46056904-46056953)
chr1 (172-228)||(48313792-48313848)
chr1 (173-224)||(999529-999579)
chr1 (197-228)||(49285055-49285086)
chr1 (171-226)||(50429653-50429708)
chr1 (173-224)||(50949569-50949620)
chr1 (177-226)||(22149580-22149630)
chr1 (174-224)||(49317752-49317801)
chr1 (242-271)||(8108978-8109007)
chr1 (179-227)||(17518481-17518530)
chr1 (172-228)||(20371038-20371092)
chr1 (177-225)||(46057019-46057068)
chr1 (175-228)||(47498495-47498547)
chr1 (177-226)||(50949164-50949213)
chr1 (172-224)||(999110-999161)
chr1 (174-222)||(21687473-21687520)
[»] chr2 (64 HSPs)
chr2 (173-276)||(30190922-30191026)
chr2 (171-276)||(20347415-20347521)
chr2 (172-271)||(24832329-24832429)
chr2 (171-276)||(40469680-40469786)
chr2 (171-271)||(11883620-11883721)
chr2 (172-276)||(6171408-6171512)
chr2 (174-231)||(11883923-11883980)
chr2 (172-228)||(18296693-18296749)
chr2 (173-228)||(2639482-2639537)
chr2 (173-228)||(26841586-26841641)
chr2 (170-228)||(2638816-2638874)
chr2 (172-228)||(37720202-37720258)
chr2 (173-228)||(5378660-5378715)
chr2 (173-228)||(41790912-41790967)
chr2 (174-228)||(17850978-17851032)
chr2 (174-228)||(26842238-26842292)
chr2 (171-228)||(8851582-8851639)
chr2 (175-228)||(18296077-18296130)
chr2 (174-231)||(30191222-30191279)
chr2 (174-271)||(43495562-43495658)
chr2 (172-228)||(8851146-8851202)
chr2 (173-228)||(5379959-5380014)
chr2 (171-226)||(6495723-6495778)
chr2 (177-228)||(7591204-7591255)
chr2 (171-230)||(32673141-32673199)
chr2 (177-263)||(15920781-15920867)
chr2 (174-228)||(26737781-26737835)
chr2 (171-231)||(26737479-26737537)
chr2 (174-231)||(40469427-40469484)
chr2 (171-231)||(43495306-43495366)
chr2 (171-226)||(6325349-6325404)
chr2 (173-228)||(7664247-7664302)
chr2 (173-228)||(20347162-20347217)
chr2 (177-228)||(26692820-26692871)
chr2 (174-228)||(7664673-7664727)
chr2 (174-228)||(16910827-16910881)
chr2 (173-226)||(29230281-29230334)
chr2 (174-226)||(6171156-6171207)
chr2 (176-276)||(18055050-18055147)
chr2 (181-224)||(6324924-6324967)
chr2 (177-231)||(18055169-18055224)
chr2 (177-228)||(18055316-18055367)
chr2 (177-231)||(43495481-43495535)
chr2 (174-228)||(7591850-7591904)
chr2 (177-227)||(15321515-15321565)
chr2 (171-224)||(5793444-5793497)
chr2 (175-228)||(16911269-16911321)
chr2 (171-228)||(26692393-26692450)
chr2 (179-227)||(26737657-26737706)
chr2 (177-226)||(29343584-29343633)
chr2 (175-227)||(6495468-6495519)
chr2 (176-228)||(19141446-19141497)
chr2 (174-226)||(40221313-40221364)
chr2 (179-226)||(40469607-40469655)
chr2 (176-269)||(15321394-15321486)
chr2 (177-231)||(17345736-17345788)
chr2 (173-231)||(17346032-17346089)
chr2 (179-228)||(40221488-40221538)
chr2 (175-228)||(18750126-18750178)
chr2 (174-227)||(32672842-32672895)
chr2 (179-227)||(32673020-32673069)
chr2 (172-228)||(7980003-7980058)
chr2 (179-226)||(11883751-11883799)
chr2 (177-224)||(19141853-19141898)
[»] chr8 (67 HSPs)
chr8 (174-276)||(41662354-41662457)
chr8 (171-271)||(12281121-12281222)
chr8 (176-271)||(765736-765832)
chr8 (174-276)||(15156136-15156239)
chr8 (173-276)||(16928941-16929043)
chr8 (174-276)||(43245871-43245974)
chr8 (174-263)||(16929207-16929296)
chr8 (174-263)||(37752381-37752470)
chr8 (172-228)||(9823361-9823417)
chr8 (172-231)||(43246173-43246232)
chr8 (173-231)||(15155882-15155940)
chr8 (174-228)||(39724048-39724102)
chr8 (173-226)||(13026634-13026687)
chr8 (177-228)||(13027281-13027332)
chr8 (174-228)||(22851390-22851444)
chr8 (174-228)||(37752084-37752138)
chr8 (174-231)||(12281423-12281480)
chr8 (196-276)||(74936-75016)
chr8 (174-269)||(3463903-3463999)
chr8 (172-228)||(13936721-13936776)
chr8 (172-263)||(18020053-18020142)
chr8 (176-228)||(25438794-25438846)
chr8 (173-228)||(13937389-13937444)
chr8 (173-228)||(34498555-34498610)
chr8 (173-228)||(37396707-37396762)
chr8 (171-226)||(41662518-41662573)
chr8 (174-228)||(9822748-9822802)
chr8 (174-228)||(23123338-23123392)
chr8 (174-263)||(34313765-34313852)
chr8 (174-228)||(37397145-37397199)
chr8 (171-228)||(24473768-24473825)
chr8 (172-231)||(41662105-41662164)
chr8 (174-224)||(3307338-3307388)
chr8 (177-227)||(15042148-15042198)
chr8 (174-228)||(24473343-24473397)
chr8 (179-231)||(18019915-18019968)
chr8 (171-231)||(23123514-23123572)
chr8 (178-231)||(43162536-43162588)
chr8 (176-228)||(74688-74739)
chr8 (176-228)||(15442765-15442817)
chr8 (172-228)||(20861638-20861694)
chr8 (173-228)||(2856525-2856580)
chr8 (173-224)||(6199100-6199151)
chr8 (177-228)||(15444647-15444698)
chr8 (171-226)||(17431284-17431339)
chr8 (175-226)||(22851958-22852009)
chr8 (177-228)||(34498125-34498176)
chr8 (174-228)||(9623502-9623556)
chr8 (172-224)||(6092775-6092825)
chr8 (181-230)||(7127660-7127708)
chr8 (177-226)||(22786843-22786892)
chr8 (174-231)||(43162234-43162290)
chr8 (240-276)||(37752181-37752217)
chr8 (179-229)||(9465700-9465751)
chr8 (176-223)||(33726696-33726743)
chr8 (173-227)||(6198657-6198711)
chr8 (171-221)||(9465604-9465653)
chr8 (177-226)||(11007657-11007707)
chr8 (193-227)||(43598756-43598790)
chr8 (177-225)||(74864-74913)
chr8 (194-231)||(9465871-9465908)
chr8 (171-228)||(11007828-11007885)
chr8 (179-227)||(15156062-15156111)
chr8 (179-231)||(33748157-33748212)
chr8 (187-224)||(39723415-39723452)
chr8 (172-228)||(25439126-25439181)
chr8 (179-226)||(37752242-37752290)
[»] chr3 (63 HSPs)
chr3 (174-276)||(20968971-20969073)
chr3 (174-276)||(10293608-10293711)
chr3 (174-231)||(10293906-10293963)
chr3 (171-231)||(20968715-20968775)
chr3 (173-228)||(48159896-48159951)
chr3 (174-263)||(18875155-18875245)
chr3 (171-229)||(47871121-47871178)
chr3 (174-227)||(1927772-1927825)
chr3 (174-263)||(17372298-17372387)
chr3 (172-228)||(53687886-53687942)
chr3 (173-228)||(40848961-40849016)
chr3 (173-227)||(18874881-18874935)
chr3 (173-227)||(45060872-45060926)
chr3 (174-228)||(47666335-47666389)
chr3 (174-228)||(48160333-48160387)
chr3 (174-227)||(8314013-8314066)
chr3 (175-227)||(22429159-22429211)
chr3 (171-227)||(53766580-53766636)
chr3 (177-228)||(1928434-1928484)
chr3 (177-263)||(17372438-17372525)
chr3 (177-228)||(27238900-27238951)
chr3 (173-227)||(8315083-8315136)
chr3 (173-227)||(27238464-27238518)
chr3 (173-223)||(42455789-42455839)
chr3 (174-228)||(42672978-42673031)
chr3 (171-228)||(26007179-26007235)
chr3 (177-228)||(13657621-13657673)
chr3 (177-231)||(14015867-14015923)
chr3 (173-228)||(21895656-21895712)
chr3 (172-228)||(40848519-40848574)
chr3 (174-222)||(45060596-45060644)
chr3 (176-227)||(1100917-1100968)
chr3 (173-227)||(1101182-1101236)
chr3 (174-228)||(3353128-3353181)
chr3 (174-228)||(3644783-3644837)
chr3 (174-228)||(10348799-10348853)
chr3 (174-228)||(24485460-24485513)
chr3 (174-228)||(42673296-42673349)
chr3 (178-227)||(4947263-4947312)
chr3 (179-231)||(4947386-4947439)
chr3 (172-225)||(17441066-17441119)
chr3 (173-226)||(47665910-47665963)
chr3 (179-226)||(18875017-18875065)
chr3 (177-225)||(26007622-26007670)
chr3 (177-231)||(1101087-1101141)
chr3 (179-225)||(9026860-9026907)
chr3 (174-229)||(13657445-13657500)
chr3 (177-228)||(14015964-14016014)
chr3 (241-276)||(18874957-18874992)
chr3 (177-228)||(23630035-23630086)
chr3 (173-228)||(36180990-36181045)
chr3 (162-228)||(47870811-47870877)
chr3 (174-225)||(53688306-53688356)
chr3 (177-228)||(53766166-53766217)
chr3 (174-228)||(9027033-9027086)
chr3 (175-228)||(17372594-17372645)
chr3 (174-228)||(21896511-21896564)
chr3 (177-231)||(26540694-26540747)
chr3 (174-224)||(42627550-42627599)
chr3 (181-226)||(3353553-3353597)
chr3 (179-227)||(20968897-20968946)
chr3 (177-228)||(3644720-3644772)
chr3 (176-228)||(22429596-22429647)
[»] chr6 (39 HSPs)
chr6 (173-276)||(3403940-3404044)
chr6 (171-276)||(21031976-21032081)
chr6 (171-231)||(18241851-18241911)
chr6 (174-276)||(18242107-18242210)
chr6 (173-228)||(33829636-33829691)
chr6 (174-228)||(3403717-3403771)
chr6 (174-228)||(33828990-33829044)
chr6 (177-276)||(30388315-30388413)
chr6 (174-263)||(11656746-11656836)
chr6 (174-263)||(30388062-30388150)
chr6 (172-228)||(7654548-7654604)
chr6 (173-228)||(10039675-10039729)
chr6 (174-228)||(10087858-10087912)
chr6 (173-271)||(13579608-13579705)
chr6 (173-223)||(21032285-21032335)
chr6 (174-228)||(33974299-33974353)
chr6 (177-231)||(3825530-3825583)
chr6 (179-231)||(2762611-2762664)
chr6 (179-231)||(10039840-10039893)
chr6 (171-228)||(29074372-29074428)
chr6 (171-228)||(29079136-29079192)
chr6 (171-228)||(29106945-29107001)
chr6 (179-231)||(12714436-12714488)
chr6 (171-231)||(23250589-23250648)
chr6 (181-231)||(21032107-21032158)
chr6 (177-224)||(32734000-32734047)
chr6 (171-228)||(2354810-2354867)
chr6 (172-229)||(33655114-33655170)
chr6 (174-263)||(33971994-33972082)
chr6 (179-230)||(11656608-11656660)
chr6 (172-271)||(31598229-31598328)
chr6 (172-224)||(31598732-31598783)
chr6 (174-228)||(22684358-22684411)
chr6 (174-228)||(22754657-22754710)
chr6 (191-271)||(2762500-2762581)
chr6 (179-226)||(3403867-3403915)
chr6 (179-226)||(30388242-30388290)
chr6 (178-221)||(31598157-31598201)
chr6 (178-221)||(31598641-31598685)
[»] scaffold0802 (3 HSPs)
scaffold0802 (174-276)||(1371-1474)
scaffold0802 (174-231)||(1118-1175)
scaffold0802 (179-227)||(1297-1346)
[»] scaffold0192 (2 HSPs)
scaffold0192 (172-269)||(25327-25425)
scaffold0192 (179-226)||(25247-25295)
[»] scaffold0110 (2 HSPs)
scaffold0110 (173-276)||(45758-45861)
scaffold0110 (172-231)||(45535-45593)
[»] chr5 (58 HSPs)
chr5 (171-263)||(18433281-18433373)
chr5 (173-276)||(25115756-25115860)
chr5 (173-276)||(25174848-25174952)
chr5 (174-276)||(18433015-18433118)
chr5 (172-276)||(26020448-26020553)
chr5 (177-276)||(34576870-34576968)
chr5 (174-228)||(18817611-18817665)
chr5 (173-231)||(25175148-25175206)
chr5 (173-229)||(25116060-25116116)
chr5 (173-228)||(12498566-12498621)
chr5 (173-228)||(12498928-12498983)
chr5 (173-228)||(18816951-18817006)
chr5 (173-228)||(26571164-26571219)
chr5 (171-228)||(19514963-19515020)
chr5 (177-228)||(11351427-11351478)
chr5 (173-224)||(16466746-16466797)
chr5 (180-231)||(16726084-16726135)
chr5 (177-228)||(21207229-21207280)
chr5 (173-228)||(22428933-22428987)
chr5 (173-231)||(33324835-33324893)
chr5 (171-228)||(11350805-11350861)
chr5 (174-263)||(34577129-34577217)
chr5 (173-228)||(22429196-22429250)
chr5 (173-228)||(26570728-26570783)
chr5 (171-226)||(34147512-34147567)
chr5 (174-228)||(3888239-3888293)
chr5 (171-224)||(2817146-2817199)
chr5 (173-230)||(5187828-5187885)
chr5 (175-228)||(22729440-22729492)
chr5 (177-226)||(31569910-31569958)
chr5 (171-228)||(37610199-37610255)
chr5 (171-228)||(37780317-37780373)
chr5 (171-228)||(41383167-41383223)
chr5 (174-226)||(37780744-37780796)
chr5 (177-231)||(9869735-9869790)
chr5 (174-228)||(19514525-19514580)
chr5 (177-227)||(41382896-41382945)
chr5 (171-228)||(3888662-3888719)
chr5 (174-263)||(9665792-9665879)
chr5 (171-227)||(9869557-9869611)
chr5 (174-227)||(23011079-23011131)
chr5 (171-228)||(43463753-43463809)
chr5 (173-226)||(43464194-43464246)
chr5 (177-228)||(9665560-9665609)
chr5 (177-224)||(23011261-23011309)
chr5 (171-227)||(25940518-25940574)
chr5 (177-231)||(12441187-12441242)
chr5 (174-220)||(12441320-12441364)
chr5 (174-224)||(10098519-10098569)
chr5 (242-276)||(22429176-22429210)
chr5 (171-228)||(5187548-5187605)
chr5 (179-227)||(25115885-25115934)
chr5 (179-227)||(25174977-25175026)
chr5 (177-225)||(34576991-34577040)
chr5 (172-228)||(11316974-11317030)
chr5 (179-226)||(18433143-18433191)
chr5 (165-228)||(34147132-34147193)
chr5 (174-226)||(37610620-37610671)
[»] scaffold0319 (3 HSPs)
scaffold0319 (172-231)||(6392-6451)
scaffold0319 (174-276)||(6648-6750)
scaffold0319 (179-226)||(6575-6623)
[»] chr4 (74 HSPs)
chr4 (174-276)||(16555768-16555871)
chr4 (173-228)||(56505692-56505747)
chr4 (173-276)||(3930431-3930534)
chr4 (171-231)||(13198903-13198963)
chr4 (173-228)||(50678778-50678833)
chr4 (177-276)||(13198606-13198707)
chr4 (171-228)||(24775783-24775840)
chr4 (171-228)||(36095814-36095871)
chr4 (178-231)||(49178813-49178866)
chr4 (172-228)||(28196773-28196829)
chr4 (171-263)||(35393741-35393832)
chr4 (172-231)||(18077199-18077258)
chr4 (173-228)||(28196345-28196400)
chr4 (177-228)||(36096475-36096526)
chr4 (173-231)||(16555514-16555572)
chr4 (174-228)||(32703650-32703704)
chr4 (174-228)||(50679424-50679478)
chr4 (175-231)||(8181992-8182049)
chr4 (175-228)||(25161879-25161932)
chr4 (171-228)||(26207746-26207803)
chr4 (171-228)||(32703222-32703279)
chr4 (172-228)||(9023680-9023736)
chr4 (173-225)||(9380744-9380796)
chr4 (175-231)||(22681576-22681631)
chr4 (172-228)||(43051252-43051308)
chr4 (171-263)||(54508812-54508904)
chr4 (173-228)||(9023243-9023298)
chr4 (173-228)||(39744465-39744520)
chr4 (171-228)||(169010-169068)
chr4 (174-228)||(4239366-4239420)
chr4 (174-228)||(9380307-9380361)
chr4 (171-228)||(293217-293274)
chr4 (174-263)||(11241389-11241478)
chr4 (175-228)||(11529169-11529222)
chr4 (175-263)||(8488447-8488534)
chr4 (172-228)||(26207359-26207414)
chr4 (172-228)||(43050605-43050661)
chr4 (173-224)||(292781-292832)
chr4 (173-228)||(11241661-11241715)
chr4 (172-227)||(25225399-25225454)
chr4 (173-228)||(45830196-45830251)
chr4 (174-228)||(169439-169493)
chr4 (172-229)||(8182171-8182229)
chr4 (179-228)||(49178644-49178694)
chr4 (173-226)||(22681881-22681934)
chr4 (174-227)||(23540253-23540306)
chr4 (179-231)||(27304890-27304943)
chr4 (173-222)||(56506580-56506629)
chr4 (173-228)||(23539840-23539893)
chr4 (174-226)||(39086625-39086677)
chr4 (171-227)||(45828991-45829047)
chr4 (173-228)||(5205987-5206042)
chr4 (172-271)||(39415483-39415580)
chr4 (173-228)||(39744029-39744084)
chr4 (174-231)||(27304718-27304773)
chr4 (174-224)||(43292361-43292411)
chr4 (174-227)||(5206231-5206283)
chr4 (175-228)||(43292038-43292091)
chr4 (177-226)||(47219203-47219252)
chr4 (169-225)||(7603422-7603477)
chr4 (179-226)||(16555695-16555743)
chr4 (172-228)||(48405960-48406015)
chr4 (188-227)||(48406386-48406425)
chr4 (194-263)||(39415244-39415314)
chr4 (174-231)||(3930179-3930235)
chr4 (179-231)||(5206132-5206185)
chr4 (175-231)||(7603146-7603200)
chr4 (171-228)||(8488185-8488242)
chr4 (163-204)||(21871315-21871356)
chr4 (163-204)||(21927176-21927217)
chr4 (174-215)||(49178533-49178574)
chr4 (244-276)||(11241641-11241673)
chr4 (173-228)||(23432475-23432531)
chr4 (187-227)||(54509116-54509156)
[»] scaffold0001 (5 HSPs)
scaffold0001 (174-231)||(438930-438987)
scaffold0001 (173-263)||(439165-439254)
scaffold0001 (171-231)||(183660-183719)
scaffold0001 (177-227)||(183367-183416)
scaffold0001 (177-224)||(183544-183592)
[»] scaffold0002 (1 HSPs)
scaffold0002 (174-276)||(411923-412024)
[»] scaffold0328 (2 HSPs)
scaffold0328 (174-228)||(6795-6849)
scaffold0328 (174-228)||(6152-6206)
[»] scaffold0535 (1 HSPs)
scaffold0535 (171-224)||(10009-10062)
[»] scaffold0041 (1 HSPs)
scaffold0041 (172-228)||(38695-38751)
[»] scaffold0017 (1 HSPs)
scaffold0017 (174-228)||(185274-185328)
[»] scaffold0029 (1 HSPs)
scaffold0029 (172-229)||(9903-9960)
[»] scaffold0460 (2 HSPs)
scaffold0460 (172-224)||(328-380)
scaffold0460 (174-228)||(763-816)
[»] scaffold0009 (1 HSPs)
scaffold0009 (171-231)||(205684-205743)
[»] scaffold0069 (2 HSPs)
scaffold0069 (174-229)||(50506-50560)
scaffold0069 (172-228)||(50073-50127)
[»] scaffold0376 (2 HSPs)
scaffold0376 (174-231)||(7597-7653)
scaffold0376 (172-228)||(7453-7508)
[»] scaffold0015 (2 HSPs)
scaffold0015 (174-231)||(17153-17209)
scaffold0015 (193-231)||(16870-16908)
[»] scaffold0598 (2 HSPs)
scaffold0598 (175-227)||(6877-6927)
scaffold0598 (176-226)||(6609-6659)
[»] scaffold0176 (2 HSPs)
scaffold0176 (173-228)||(20043-20098)
scaffold0176 (171-228)||(19618-19674)
[»] scaffold1221 (2 HSPs)
scaffold1221 (174-228)||(1511-1564)
scaffold1221 (177-231)||(1781-1834)
[»] scaffold0035 (2 HSPs)
scaffold0035 (175-231)||(72967-73023)
scaffold0035 (177-230)||(73089-73143)


Alignment Details
Target: chr7 (Bit Score: 75; Significance: 1e-34; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 174 - 276
Target Start/End: Complemental strand, 3687710 - 3687608
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttttgccccctct 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||| |    
T  3687710 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcttttttttgagcgattttgcaccccatctttttgcccccttt 3687611  T
Q  274 ctg 276  Q
    |||    
T  3687610 ctg 3687608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 173 - 271
Target Start/End: Complemental strand, 9412380 - 9412281
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcgattttgcaccccatctttttgccccct 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  9412380 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccct 9412281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 44600191 - 44600135
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  44600191 aaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 44600135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 44599489 - 44599543
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  44599489 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 44599543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 13772955 - 13772898
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  13772955 ggcttaattgcacttttcccccctatcatttgctaattgtgcgattttgcaccccctc 13772898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 9412020 - 9412080
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  9412020 aaaggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctc 9412080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 37972452 - 37972396
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  37972452 aaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37972396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 10533033 - 10533088
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  10533033 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 10533088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 13863312 - 13863367
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  13863312 aggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 13863367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 37889314 - 37889259
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  37889314 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37889259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 9035347 - 9035293
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  9035347 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 9035293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 37888833 - 37888887
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  37888833 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37888887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 20419381 - 20419324
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  20419381 aaaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 20419324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 3205149 - 3205093
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  3205149 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 3205093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 229
Target Start/End: Original strand, 9034866 - 9034922
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 229  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| |||||||||    
T  9034866 aggcttaattgcacttttcccccctataatttgccaattgtgcgattctgcaccccc 9034922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 13864012 - 13863964
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattt 220  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13864012 aaggcttaattgcacttttcacccctatcttttgccaattgtgcgattt 13863964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 17156965 - 17157021
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  17156965 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 17157021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 22740154 - 22740210
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  22740154 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 22740210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 29292920 - 29292972
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  29292920 aaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 29292972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 8643821 - 8643766
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  8643821 aggcttaattgcacttttcatccctatcttttaccaattgtgcgattttgcacccc 8643766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 13772640 - 13772695
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  13772640 aggcttaattgcacttttcctccctatcttttgctaattgtgtgattttgcacccc 13772695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 20418891 - 20418942
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  20418891 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 20418942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 3687353 - 3687411
Alignment:
Q  174 ggcttaattgcacttttcccc-cctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||    
T  3687353 ggcttaattgcacttttccccccctatcttttgttaattgtgcgattttgcaccccctc 3687411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 23686772 - 23686723
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 222  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  23686772 aggcttaattgcactttttccccctatcttttgctaattgtgcgattttg 23686723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 18863970 - 18864021
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  18863970 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 18864021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 29293400 - 29293349
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcac 225  Q
    |||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  29293400 ggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcac 29293349  T

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Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 37971959 - 37972014
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| ||||| |  |||||||||||||||||||||||||||    
T  37971959 aggcttaattgcacttttctcccctgtagtttgccaattgtgcgattttgcacccc 37972014  T

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Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 46816366 - 46816311
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||| ||||||||| |||||| ||||||||||||||||    
T  46816366 aggcttaattgcactttttcccgctatcttttaccaattatgcgattttgcacccc 46816311  T

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Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 5735253 - 5735303
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcac 225  Q
    ||||||||||||||||| ||||||||||| || ||||||||||||||||||    
T  5735253 gcttaattgcacttttctcccctatctttggctaattgtgcgattttgcac 5735303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 13741557 - 13741611
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||| |||||||||||||  ||| |||||||||||||||||||||||    
T  13741557 ggcttaattgcatttttcccccctatagtttaccaattgtgcgattttgcacccc 13741611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 38826969 - 38826915
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||||||||||||| |||||||||||||  |||| ||||||||||||||||||||    
T  38826969 aaggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcacc 38826915  T

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Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 13744289 - 13744233
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  13744289 aaaggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacccc 13744233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 8953941 - 8953886
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||| |||||||||  |||||||| |||||||||||||||    
T  8953941 gcttaattgcacttttccccc-tatcttttgttaattgtgcaattttgcaccccctc 8953886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 16199033 - 16198977
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| |||  |||  |||||||||||||||||||||||||||    
T  16199033 aaggcttaattgcactttttcccattatagtttgccaattgtgcgattttgcacccc 16198977  T

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Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 18925062 - 18925114
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||||||||||||||  ||||||||||||| |||||||| ||||||||||    
T  18925062 ggcttaattgcacttttcttccctatcttttgctaattgtgcaattttgcacc 18925114  T

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Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 3204669 - 3204721
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||  ||||||||  |||||||||||||||||||||||||||    
T  3204669 ggcttaattgcacttt--ccccctatagtttgccaattgtgcgattttgcacccc 3204721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 18925280 - 18925229
Alignment:
Q  178 taattgcacttttcccccctatctttt-gccaattgtgcgattttgcacccc 228  Q
    |||||| |||||| ||||||||||||| ||||||||||||||||||||||||    
T  18925280 taattgaacttttgccccctatctttttgccaattgtgcgattttgcacccc 18925229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 27096168 - 27096223
Alignment:
Q  177 ttaattgcacttttcccccctatc-ttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||| ||||||||| |||| ||||||||||||||||||| ||||||    
T  27096168 ttaattgcacttttgccccctatctttttaccaattgtgcgattttgcaacccctc 27096223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 27182135 - 27182080
Alignment:
Q  177 ttaattgcacttttcccccctatc-ttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||| ||||||||| |||| ||||||||||||||||||| ||||||    
T  27182135 ttaattgcacttttgccccctatctttttaccaattgtgcgattttgcaacccctc 27182080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 29291808 - 29291863
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||| | ||||||||||||  |||| |||||||||||||||||||    
T  29291808 cttaattgcactttttctccctatcttttgataattatgcgattttgcaccccctc 29291863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 269
Target Start/End: Complemental strand, 29292095 - 29292001
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttttgcccc 269  Q
    |||||||||||||||||  || ||| ||||||| |||||||||||||| |||||||||         ||||||||||||||| |||||||||||||    
T  29292095 ggcttaattgcacttttttcctctaacttttgctaattgtgcgattttccaccccctctttttttt-agcgattttgcaccctatctttttgcccc 29292001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 33628715 - 33628660
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||| |||||||||||| ||| ||||||||| | |||||||||||||||||||||    
T  33628715 aggctaaattgcactttttccctctatcttttactaattgtgcgattttgcacccc 33628660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 6908212 - 6908265
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||||||||||||| ||||| |||  ||||||||||||||||||||    
T  6908212 aggcttaattgcacttttccccc-tatctattgttaattgtgcgattttgcaccc 6908265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 6908534 - 6908485
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  6908534 ttaattgcacttt-cccccctattttttgctaattgtgcgattttgcaccc 6908485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 27096392 - 27096339
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||||||| ||||||    
T  27096392 ttaattgcacttttccccc-tatcttttgtcaattgtgtgattttgcatcccctc 27096339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 27181911 - 27181964
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||| |||||||||| |||||||| ||||||||| ||||||    
T  27181911 ttaattgcacttttcccc-ctatcttttgtcaattgtgtgattttgcatcccctc 27181964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 214
Target Start/End: Original strand, 34235736 - 34235778
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtg 214  Q
    |||||||||||||||||||||| || |||||||||||||||||    
T  34235736 aaggcttaattgcacttttccctcccatcttttgccaattgtg 34235778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 42418589 - 42418639
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 222  Q
    ||||||||||| ||||||||||||||||  ||||| |||||||||||||||    
T  42418589 aaggcttaatttcacttttcccccctatagtttgctaattgtgcgattttg 42418639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 48359320 - 48359373
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  48359320 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacccc 48359373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 5349789 - 5349733
Alignment:
Q  169 acaaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||| ||||||||||||||||   |||||||||||||  |||||||||||||||||||||    
T  5349789 acaatggcttaattgcacttt---cccctatcttttgttaattgtgcgattttgcacccc 5349733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 18864456 - 18864404
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||||||| ||||||||||| |||  |||||||||||||||||||||||||    
T  18864456 aggcttaattgtacttttccccc-tatagtttgccaattgtgcgattttgcacc 18864404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 23686421 - 23686473
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||||||||||| ||||||||||| |||||| | |||||||||||    
T  23686421 ggcttaattgcacttttcccc-ctatcttttgctaattgtacaattttgcaccc 23686473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 30857961 - 30857904
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||  | | ||||||||| ||||||||| ||||||||||||    
T  30857961 aaaggcttaattgcacttttgtctcttatcttttgtcaattgtgcaattttgcacccc 30857904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 34236030 - 34235977
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 229  Q
    |||||||| | |||||||  ||||||||||| ||||||||||||||||||||||    
T  34236030 cttaattgtatttttcccttctatcttttgctaattgtgcgattttgcaccccc 34235977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 35079960 - 35080012
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||||||||||| ||||||||||| ||||||| | ||||||||||    
T  35079960 ggcttaattgcacttttcccc-ctatcttttgctaattgtggggttttgcaccc 35080012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 27096047 - 27096094
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 222  Q
    |||||||||||||||| ||||||||| |||||| |||||||||||||||    
T  27096047 ggcttaattgcacttt-cccccctatattttgctaattgtgcgattttg 27096094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 27182256 - 27182209
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 222  Q
    |||||||||||||||| ||||||||| |||||| |||||||||||||||    
T  27182256 ggcttaattgcacttt-cccccctatattttgctaattgtgcgattttg 27182209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 42419079 - 42419028
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 229  Q
    ||||||||||||||||||| |||  ||||||||||||||| ||||||||||||    
T  42419079 ttaattgcacttttccccc-tatagtttgccaattgtgcgtttttgcaccccc 42419028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 5735382 - 5735429
Alignment:
Q  181 ttgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 227  Q
    |||||||||| | ||||||||||| |||||||||||||||||||||||    
T  5735382 ttgcactttttctccctatctttttgccaattgtgcgattttgcaccc 5735429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 8953597 - 8953693
Alignment:
Q  169 acaaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttttgcc 267  Q
    ||||||| |||||||||||||  ||||| |||||||| ||||| |||||||||||||  ||||         ||||||||||||||||||| |||||||    
T  8953597 acaaaggtttaattgcacttt--cccccgatcttttgacaattatgcgattttgcacttcctctttttttttagcgattttgcaccccatccttttgcc 8953693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 15567322 - 15567276
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||||||||||||||||||||||||||   | |||||||||||||||    
T  15567322 ttaattgcacttttcccccctatcttttgc---tagtgcgattttgcacc 15567276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 22740641 - 22740591
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  22740641 ttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacccc 22740591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 18925373 - 18925322
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| |  ||| |||||| |||||||||||||||||||||    
T  18925373 gcttaattgcacttttcctc--tatattttgctaattgtgcgattttgcacccc 18925322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 38191387 - 38191440
Alignment:
Q  178 taattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||| |||| |||||||| |||||||||||||||||||||| ||||    
T  38191387 taattgcactttttcccc-tatctttttgccaattgtgcgattttgcacctcctc 38191440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 229
Target Start/End: Original strand, 39983700 - 39983754
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 229  Q
    ||||||||||||||||||||| ||||||||   |||| |||||||| ||||||||    
T  39983700 gcttaattgcacttttcccccttatcttttattaattatgcgatttcgcaccccc 39983754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 5735598 - 5735553
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttg 222  Q
    |||||||||||||| |||||||||||||   |||||||||||||||    
T  5735598 ttaattgcactttttccccctatcttttattaattgtgcgattttg 5735553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 6908440 - 6908391
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 227  Q
    |||||| ||||| ||||||||||||| || ||||||||||||||||||||    
T  6908440 aattgcgcttttaccccctatctttttgctaattgtgcgattttgcaccc 6908391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 15566989 - 15567046
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||| |||| | ||| |  |||||| |||||||||||||||||||||    
T  15566989 aaaggcttaattgcatttttgctccccactttttgctaattgtgcgattttgcacccc 15567046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 36527381 - 36527437
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||| |||||||||||||| |||| |||  |||| ||||||||||||||||||||||    
T  36527381 aaaggtttaattgcactttttcccc-tatagtttgtcaattgtgcgattttgcacccc 36527437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 38191259 - 38191312
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    ||||| |||||||||||||||| |  |||||||||| |||| ||||||||||||    
T  38191259 aaaggtttaattgcacttttcctctttatcttttgctaattatgcgattttgca 38191312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 38191619 - 38191566
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||| ||||  |||||||||||||  |||| |||||||||||||||    
T  38191619 ggcttaattgcattttttacccctatcttttgttaattatgcgattttgcaccc 38191566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 172 - 276
Target Start/End: Original strand, 47955304 - 47955409
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcgattttgcaccccatctttttgccccc 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  47955304 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccc 47955403  T
Q  271 tctctg 276  Q
    | ||||    
T  47955404 tttctg 47955409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 174 - 276
Target Start/End: Original strand, 41082909 - 41083011
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttttgccccctct 273  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||         ||||||||||||||||||||||||||||||| |    
T  41082909 ggcttaattgtactttttccccctatcttttgccaattgtgcgattttgcatcccctctttttttttagcgattttgcaccccatctttttgcccccttt 41083008  T
Q  274 ctg 276  Q
    |||    
T  41083009 ctg 41083011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 8109050 - 8108993
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8109050 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 8108993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 49284406 - 49284463
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  49284406 aaaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 49284463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 176 - 276
Target Start/End: Complemental strand, 17518653 - 17518555
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttttgccccctctct 275  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||        |||| |||||||| |||||||||||||||||| |||    
T  17518653 cttaattgcacttttccccc-tatcttttgccaattgtgcgattttgcaccccctcttttttttgagcaattttgca-cccatctttttgccccctttct 17518556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 166 - 269
Target Start/End: Complemental strand, 22149761 - 22149659
Alignment:
Q  166 tttacaaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttttg 265  Q
    |||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||          |||||||||||||||||||||||||    
T  22149761 tttataaaggtttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacctcct-tttttttttagcgattttgcaccccatctttttg 22149663  T
Q  266 cccc 269  Q
    ||||    
T  22149662 cccc 22149659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 48190771 - 48190825
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  48190771 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 48190825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 39692057 - 39692000
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  39692057 aaaggcttaattgcacttttcccccctatattttgtcaattgtgcgattttgcacccc 39692000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 13589715 - 13589656
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  13589715 aaaggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcaccccctc 13589656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 32163098 - 32163043
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  32163098 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 32163043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 44911024 - 44911079
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  44911024 aggcttaattgcactttccccccctatattttgccaattgtgcgattttgcacccc 44911079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 48191410 - 48191355
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  48191410 aggcttaattgcacttttcacccctatcttttgccaatggtgcgattttgcacccc 48191355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 9347126 - 9347180
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  9347126 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 9347180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 47955663 - 47955605
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  47955663 aggcttaattgcacttttcccccctatcttttattaattgtgcgattttgcaccccctc 47955605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 263
Target Start/End: Complemental strand, 31848247 - 31848158
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttt 263  Q
    ||||||||||||||||||| |||||||||||||  |||||| |||||||||||||||||        ||||||||||||||||||||||||    
T  31848247 aggcttaattgcacttttctcccctatcttttgttaattgtacgattttgcaccccctc-ttttttcgagcgattttgcaccccatctttt 31848158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 22149400 - 22149490
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttt 263  Q
    |||||||||||||||||||| ||||||||| ||||  ||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  22149400 aaaggcttaattgcactttt-ccccctatc-tttggtaattgtgcgattttgcaccccctcttttttttgagcgattttgcaccccatctttt 22149490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 50430132 - 50430081
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  50430132 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 50430081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 1176839 - 1176893
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||| |||||||||||||| ||||||||| |||||||||||||||    
T  1176839 ttaattgcacttttaccccctatcttttgtcaattgtgcaattttgcaccccctc 1176893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 6002237 - 6002291
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||||||||||||| |||||||| |||||||||||||    
T  6002237 ggcttaattgcacttttcacccctatcttttgtcaattgtgtgattttgcacccc 6002291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 8108724 - 8108810
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttt 263  Q
    |||||||||||||||| ||||||||||||  |||||||||||||||||||||||         |||||||||||||||| |||||||    
T  8108724 ttaattgcacttttcctccctatcttttgttaattgtgcgattttgcacccccttttttttttgagcgattttgcaccctatctttt 8108810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 48105170 - 48105116
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  48105170 ggcttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacccc 48105116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 27172598 - 27172545
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    ||||||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  27172598 aaaggcttaattgcacttttcccccctgtactttgccaattgtgcgattttgca 27172545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 171 - 276
Target Start/End: Original strand, 31847892 - 31847997
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttttgccccc 270  Q
    ||||| ||||||||||||| ||||| |||||||||| |||||||| |||||||| ||| |         |||||||||||||||| ||||||||||||||    
T  31847892 aaaggtttaattgcactttacccccttatcttttgctaattgtgcaattttgcatcccatattttttttgagcgattttgcacccgatctttttgccccc 31847991  T
Q  271 tctctg 276  Q
    | ||||    
T  31847992 tttctg 31847997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 48104675 - 48104732
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||| |||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  48104675 aaaggtttaattgcacttttcccccctatagtttggcaattgtgcgattttgcacccc 48104732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 4692489 - 4692433
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| ||||||||  |||||||||||||| ||||||||||||    
T  4692489 aaggcttaattgcactttttccccctatagtttgccaattgtgcaattttgcacccc 4692433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 46823846 - 46823894
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcac 225  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  46823846 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcac 46823894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 50526524 - 50526472
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||| ||||||||  |||||||||||||||||||||||||||    
T  50526524 cttaattgcactttttccccctatagtttgccaattgtgcgattttgcacccc 50526472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 226
Target Start/End: Complemental strand, 13918920 - 13918869
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||||||||||||||||| ||||||  |||||||||||||||||||||||||    
T  13918920 gcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacc 13918869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 19008805 - 19008750
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  |||  ||||||||||||||||||||||    
T  19008805 aggcttaattgcacttttcccccctatagtttcgcaattgtgcgattttgcacccc 19008750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 229
Target Start/End: Complemental strand, 20371406 - 20371352
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 229  Q
    |||||||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  20371406 ggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcaccccc 20371352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 26815174 - 26815119
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  |||  ||||||||||||||||||||||    
T  26815174 aggcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcacccc 26815119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 28633719 - 28633774
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||| |||  |||||||||||| ||||||||||||||    
T  28633719 aggcttaattgcacttttcccccttatagtttgccaattgtacgattttgcacccc 28633774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 28634208 - 28634157
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  28634208 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 28634157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 50615238 - 50615289
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgc 223  Q
    ||||||||||||||||||||||||||||  |||| |||||||||||||||||    
T  50615238 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50615289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 50623066 - 50623117
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgc 223  Q
    ||||||||||||||||||||||||||||  |||| |||||||||||||||||    
T  50623066 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50623117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 6703948 - 6703894
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| |||||||  |||||||||||||| ||||||||||||    
T  6703948 ggcttaattgcacttttctcccctatagtttgccaattgtgcaattttgcacccc 6703894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 13918446 - 13918500
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||| || |||||  |||||||||||||||||||||||||||    
T  13918446 ggcttaattgcactttttcctcctatagtttgccaattgtgcgattttgcacccc 13918500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 26814694 - 26814748
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| ||||||  |||| ||||||||||||||||||||||    
T  26814694 ggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcacccc 26814748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 27172116 - 27172169
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  27172116 ggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcacccc 27172169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 39690793 - 39690847
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||| |||||||||| |||||||| ||| |||||||||||||||||||||||    
T  39690793 aggcttagttgcactttttccccctatatttggccaattgtgcgattttgcaccc 39690847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 41083265 - 41083208
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||| |||||||||  | ||||||||||||||||||||||    
T  41083265 aggcttaattgcacttttccccc-tatcttttgttagttgtgcgattttgcaccccctc 41083208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 42611183 - 42611237
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||| ||||||||||||||||||| |||  |||||||||||||||||||||||||    
T  42611183 aaggtttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacc 42611237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 1177069 - 1177016
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccct 230  Q
    |||||||||||||||| |||||||||| || |||||||| ||||||||||||||    
T  1177069 ttaattgcacttttcctccctatctttcgctaattgtgcaattttgcaccccct 1177016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 20480665 - 20480613
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||||||||||||| |||  ||||||||||||||||||||||||||    
T  20480665 ggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcaccc 20480613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 6002946 - 6002894
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||  |||||||||||  ||||||||||||||||||||||    
T  6002946 cttaattgcacttttcatccctatcttttcgcaattgtgcgattttgcacccc 6002894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 19007732 - 19007783
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgc 223  Q
    ||||||||||||||||||| |||||||||  ||||||||||||||||||||||    
T  19007732 aaaggcttaattgcacttt-cccccctatagtttgccaattgtgcgattttgc 19007783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 20480166 - 20480221
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  20480166 aaggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacccc 20480221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 46824334 - 46824278
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| || |||||  |||||||||||||| ||||||||||||    
T  46824334 aaggcttaattgcactttttcctcctatagtttgccaattgtgcaattttgcacccc 46824278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 9347605 - 9347551
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||| |||||||||  |||||||||||||| ||||||||||||    
T  9347605 aggcttaattgcacttt-cccccctatagtttgccaattgtgcaattttgcacccc 9347551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 1176717 - 1176766
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  1176717 ggcttaattgcacttt-cccccctatattttgctaattgtgcgattttgca 1176766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 17518302 - 17518359
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||| |||||||  |||||||||  ||||||||||||||||||||||||    
T  17518302 aggcttaattgcacctttcccct-tatcttttgttaattgtgcgattttgcaccccctc 17518359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 21687025 - 21687079
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||  |||| ||||||||  ||||||||||||    
T  21687025 ggcttaattgcacttttcccccctatagtttgtcaattgtgtaattttgcacccc 21687079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 44911488 - 44911438
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||| |||| ||||||||  ||||||||||||||||||||||||||    
T  44911488 ttaattgcattttttccccctatagtttgccaattgtgcgattttgcaccc 44911438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 49318219 - 49318170
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||||||||||||||| |||||||||  |||||||||||||||||||||||    
T  49318219 ggcttaattgcacttt-cccccctatagtttgccaattgtgcgattttgca 49318170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 50615674 - 50615621
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  50615674 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacccc 50615621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 50623502 - 50623449
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  50623502 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacccc 50623449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 6703459 - 6703512
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||||||||||||||||| || |||||  ||| |||||||||||||||||||||    
T  6703459 aggcttaattgcactttttcctcctatagtttaccaattgtgcgattttgcacc 6703512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 33085668 - 33085725
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||| |||||||| |||||| ||||| |||||||  |||||||||||||    
T  33085668 aaaggcttaattgtacttttccaccctatattttgtcaattgtttgattttgcacccc 33085725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 42611665 - 42611616
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||||||||||| |||||||  |||| ||||||||||||||||||||    
T  42611665 ttaattgcacttttctcccctatagtttgtcaattgtgcgattttgcacc 42611616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 31848019 - 31848067
Alignment:
Q  177 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgca 224  Q
    |||||||||||||| ||| ||||||||| ||||||||||||||||||||    
T  31848019 ttaattgcacttttgccctctatctttttgccaattgtgcgattttgca 31848067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 46056904 - 46056953
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||||||||||||||  ||||||||||||||| |||| ||||||||||||||    
T  46056904 gcttaattgcacttt--ccccctatcttttgctaattttgcgattttgcacc 46056953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 48313848 - 48313792
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||| |||||| |||  |||||||||| |||||||| ||||||||||||    
T  48313848 aaggcttaattgtactttttcccattatcttttgctaattgtgcaattttgcacccc 48313792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 224
Target Start/End: Complemental strand, 999579 - 999529
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    ||||||||||||||||||| |||||||   ||||||||||||||||||||||    
T  999579 aggcttaattgcacttttc-cccctatagattgccaattgtgcgattttgca 999529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 228
Target Start/End: Complemental strand, 49285086 - 49285055
Alignment:
Q  197 tatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||||||    
T  49285086 tatcttttgccaattgtgcgattttgcacccc 49285055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 226
Target Start/End: Original strand, 50429653 - 50429708
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||||||||| ||||||||||  |||  ||||| |||||||||||||||||||    
T  50429653 aaaggcttaattgtacttttcccctttataatttgctaattgtgcgattttgcacc 50429708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 224
Target Start/End: Complemental strand, 50949620 - 50949569
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||| |||||||||||| |||||||||  |||| ||||||||||||||||||    
T  50949620 aggcataattgcactttccccccctatagtttgtcaattgtgcgattttgca 50949569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 22149630 - 22149580
Alignment:
Q  177 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 226  Q
    |||||||||||||| |||| |||||||| || |||||||||||||||||||    
T  22149630 ttaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 22149580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 49317752 - 49317801
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    ||||||||||||||||| ||||||||  |||||||||||||| ||||||||    
T  49317752 ggcttaattgcactttt-ccccctatagtttgccaattgtgcaattttgca 49317801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 271
Target Start/End: Complemental strand, 8109007 - 8108978
Alignment:
Q  242 gcgattttgcaccccatctttttgccccct 271  Q
    ||||||||||||||||||||||||||||||    
T  8109007 gcgattttgcaccccatctttttgccccct 8108978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 17518530 - 17518481
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 227  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  17518530 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 17518481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 20371038 - 20371092
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||  ||||||||  |||| ||||||||| ||||||||||||    
T  20371038 aaggcttaattgcacttt--ccccctatagtttgtcaattgtgcaattttgcacccc 20371092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 46057019 - 46057068
Alignment:
Q  177 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcac 225  Q
    ||||||||| |||| |||||||| |||| |||||||||||||||||||||    
T  46057019 ttaattgcaattttgccccctatttttttgccaattgtgcgattttgcac 46057068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 47498547 - 47498495
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||| |||  |||| |||||||||| |||||||||||    
T  47498547 gcttaattgcacttttccccc-tatagtttgtcaattgtgcggttttgcacccc 47498495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 50949164 - 50949213
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||| ||||||||| |||||  | |||||||||||||||||||||||    
T  50949164 ttaattgtacttttccctcctatagtctgccaattgtgcgattttgcacc 50949213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 999110 - 999161
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||| ||||||||||||||||||| |||  |||| ||||||||||||||||||    
T  999110 aaggtttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgca 999161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 21687520 - 21687473
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 222  Q
    |||||||| ||||||||||||| |||  |||||||||||||||||||||    
T  21687520 ggcttaatagcacttttccccc-tataatttgccaattgtgcgattttg 21687473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 5e-31; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 173 - 276
Target Start/End: Original strand, 30190922 - 30191026
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcgattttgcaccccatctttttgccccct 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  30190922 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccct 30191021  T
Q  272 ctctg 276  Q
     ||||    
T  30191022 ttctg 30191026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 276
Target Start/End: Complemental strand, 20347521 - 20347415
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcgattttgcaccccatctttttgcccc 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||| |||||||||||||||||||||| |||    
T  20347521 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagggattttgcaccccatctttttgtccc 20347422  T
Q  270 ctctctg 276  Q
    || ||||    
T  20347421 ctttctg 20347415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 172 - 271
Target Start/End: Original strand, 24832329 - 24832429
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcgattttgcaccccatctttttgccccc 270  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||         |||||||||||||||||||||||||||||||    
T  24832329 aaggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccccatctttttgccccc 24832428  T
Q  271 t 271  Q
    |    
T  24832429 t 24832429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 171 - 276
Target Start/End: Complemental strand, 40469786 - 40469680
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcgattttgcaccccatctttttgcccc 269  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||         ||||||||||||||||||||||||||||||    
T  40469786 aaaggtttaattgcactttttccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgcccc 40469687  T
Q  270 ctctctg 276  Q
    || ||||    
T  40469686 ctttctg 40469680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 11883620 - 11883721
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcgattttgcaccccatctttttgcccc 269  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||         |||| |||||||||| ||||||||||||||    
T  11883620 aaaggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcaattttgcacctcatctttttgcccc 11883719  T
Q  270 ct 271  Q
    ||    
T  11883720 ct 11883721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 172 - 276
Target Start/End: Complemental strand, 6171512 - 6171408
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttttgccccct 271  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||           |||| |||||||||||||||||||||||||||    
T  6171512 aaggcttaattgcacttttcccccctatcttttgccaattgtgggattttgcacccctctttttttttgagcaattttgcaccccatctttttgccccct 6171413  T
Q  272 ctctg 276  Q
     ||||    
T  6171412 ttctg 6171408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 11883980 - 11883923
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11883980 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 11883923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 18296749 - 18296693
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18296749 aaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 18296693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 2639537 - 2639482
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2639537 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 2639482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 26841586 - 26841641
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26841586 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 26841641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 2638816 - 2638874
Alignment:
Q  170 caaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  2638816 caaaggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 2638874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 37720202 - 37720258
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  37720202 aaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 37720258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 5378660 - 5378715
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  5378660 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 5378715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 41790967 - 41790912
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  41790967 aggcttaattgcacttttcccccctatattttgccaattgtgcgattttgcccccc 41790912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 17850978 - 17851032
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  17850978 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 17851032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 26842292 - 26842238
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  26842292 ggcttaagtgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 26842238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 8851639 - 8851582
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  8851639 aaaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 8851582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 18296077 - 18296130
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  18296077 gcttaattgtacttttcacccctatcttttgccaattgtgcgattttgcacccc 18296130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 30191279 - 30191222
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  30191279 ggcttaattgcacttttcccccctatcttttattaattgtgcgattttgcaccccctc 30191222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 271
Target Start/End: Complemental strand, 43495658 - 43495562
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttttgccccct 271  Q
    |||||||||||||||| ||| ||||| |||||| ||||||||||||||||| ||||||        ||||||||||||||||||||||||||| ||||    
T  43495658 ggcttaattgcacttt-cccacctatattttgctaattgtgcgattttgcatcccctcttttttttgagcgattttgcaccccatctttttgcgccct 43495562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 8851146 - 8851202
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||| |||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  8851146 aaggtttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 8851202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 5380014 - 5379959
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  ||| |||||||||||||||||||||||    
T  5380014 aggcttaattgcacttttcccccctatagtttaccaattgtgcgattttgcacccc 5379959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 171 - 226
Target Start/End: Complemental strand, 6495778 - 6495723
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||||||||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  6495778 aaaggcttaattgcacttttcctccctatcttttgtgaattgtgcgattttgcacc 6495723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 7591204 - 7591255
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  7591204 ttaattgtacttttcacccctatcttttgccaattgtgcgattttgcacccc 7591255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 32673199 - 32673141
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccct 230  Q
    ||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  32673199 aaaggtttaattgcactttttcccc-tatcttttgccaattgtgcgattttgcaccccct 32673141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 15920781 - 15920867
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttt 263  Q
    |||||| |||||||||| |||||||||||  ||||||||||||||||||||||||        |||| |||||||||||||||||||    
T  15920781 ttaatttcacttttccctcctatcttttgttaattgtgcgattttgcaccccctcttttttttgagcaattttgcaccccatctttt 15920867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 26737835 - 26737781
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| |||||||||||||| || ||||||||||||||||||    
T  26737835 ggcttaattgcacttttcacccctatcttttgctaactgtgcgattttgcacccc 26737781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 26737479 - 26737537
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||| ||  |||||||||| ||||||||||||||||||||||||    
T  26737479 aaaggcttaattgcacttttctcc--tatcttttgctaattgtgcgattttgcaccccctc 26737537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 40469427 - 40469484
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||| | ||||||| |||||||||||| ||||||||||||||||||||||||    
T  40469427 ggcttaattgtatttttccctcctatcttttgctaattgtgcgattttgcaccccctc 40469484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 43495306 - 43495366
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||| ||||| |||||| |||||||||||||| || ||||||    
T  43495306 aaaggcttaattgcacttttcccacctatattttgctaattgtgcgatttttcatcccctc 43495366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 226
Target Start/End: Complemental strand, 6325404 - 6325349
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||| |||||||||||||||||||| |||  |||||||||||||||||||||||||    
T  6325404 aaagacttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacc 6325349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 7664247 - 7664302
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  |||  ||||||||||||||||||||||    
T  7664247 aggcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcacccc 7664302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 20347162 - 20347217
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||| ||||||||||| ||||||||||  |||||||||||||||||||||    
T  20347162 aggcttaattacacttttcccctctatcttttgttaattgtgcgattttgcacccc 20347217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 26692871 - 26692820
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||||  |||||||||||||||||||||||||||    
T  26692871 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcacccc 26692820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 7664727 - 7664673
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| ||||||  |||| ||||||||||||||||||||||    
T  7664727 ggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcacccc 7664673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 16910827 - 16910881
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||| | |  |||||||||||||||||||||||||||    
T  16910827 ggcttaattgcacttttcccccatgtagtttgccaattgtgcgattttgcacccc 16910881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 29230281 - 29230334
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||||||||||||||||||| | |||||||||| |||||||| |||||||||||    
T  29230281 aggcttaattgcacttttcctctctatcttttgtcaattgtgtgattttgcacc 29230334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 6171156 - 6171207
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||||||||    
T  6171156 ggcttaattgcacttttcccc-ctatcttttgttaattgtgcgattttgcacc 6171207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 276
Target Start/End: Original strand, 18055050 - 18055147
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttttgccccctctct 275  Q
    |||||||||||||||||||| || ||||||| ||||||||||||||||||||||||         |||||||||||||||||| |||||| ||||| |||    
T  18055050 cttaattgcacttttccccc-ta-cttttgctaattgtgcgattttgcaccccctctttttttttagcgattttgcaccccat-tttttgtcccctttct 18055146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 224
Target Start/End: Original strand, 6324924 - 6324967
Alignment:
Q  181 ttgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||||||||||||||||||  |||||||||||||||||||||||    
T  6324924 ttgcacttttcccccctatagtttgccaattgtgcgattttgca 6324967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 18055169 - 18055224
Alignment:
Q  177 ttaattgcacttttcccccctatc-ttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||| | ||||||  |||||||||||||||||||||||||||||||    
T  18055169 ttaattgcacttttgcaccctataattttgccaattgtgcgattttgcaccccctc 18055224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 18055367 - 18055316
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||| ||| ||| |||||| ||||||||||||||||||||||    
T  18055367 ttaattgcactttttccctctaccttttgtcaattgtgcgattttgcacccc 18055316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 43495535 - 43495481
Alignment:
Q  177 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||| |||||||| | |||||||||||||||||||||||||    
T  43495535 ttaattgcacttttccccc-tatctttttgtcaattgtgcgattttgcaccccctc 43495481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 7591904 - 7591850
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||  |||| | ||||||||||| ||||||||||||||||||||||    
T  7591904 ggcttaattgcatctttcactcctatcttttgtcaattgtgcgattttgcacccc 7591850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 15321515 - 15321565
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||||  |||||||||||| |||| |||||||||||||||||    
T  15321515 ttaattgcacttttgtcccctatctttttccaactgtgcgattttgcaccc 15321565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 5793444 - 5793497
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    ||||| ||||||||||||||||||| | |  |||||||||||||||||||||||    
T  5793444 aaaggtttaattgcacttttcccccttgtagtttgccaattgtgcgattttgca 5793497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 16911321 - 16911269
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||| | |||||||  |||||||||||||||||||||||||||    
T  16911321 gcttaattgcacttt-cgcccctatagtttgccaattgtgcgattttgcacccc 16911269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 26692393 - 26692450
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||| |||||||||||||| ||| ||||  |||| ||||||||||||||||||||||    
T  26692393 aaaggtttaattgcactttttccctctatagtttgtcaattgtgcgattttgcacccc 26692450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 26737706 - 26737657
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 227  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  26737706 aattgcacttttgccccctatctttttgctaattgtgcgattttgcaccc 26737657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 29343584 - 29343633
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||||||||||||||| | |||||||||| |||||||| |||||||||||    
T  29343584 ttaattgcacttttcctctctatcttttgtcaattgtgtgattttgcacc 29343633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 6495468 - 6495519
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||||||||| ||||||| ||||  ||||||||||||||||||||    
T  6495468 gcttaattgcacttttcctccctatc-tttgttaattgtgcgattttgcaccc 6495519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 19141446 - 19141497
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||| ||||||||  |||||||||||||| ||||||||||||    
T  19141446 cttaattgcactttttccccctatagtttgccaattgtgc-attttgcacccc 19141497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 40221313 - 40221364
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||||||||| ||||||| ||||||||||| |||||| ||||||||||||    
T  40221313 ggcttaattgcacctttcccc-ctatcttttgctaattgttcgattttgcacc 40221364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 40469655 - 40469607
Alignment:
Q  179 aattgcacttttcccccctatc-ttttgccaattgtgcgattttgcacc 226  Q
    ||||||||||||||||| |||| |||||| |||||||||||||||||||    
T  40469655 aattgcacttttcccccttatcgttttgctaattgtgcgattttgcacc 40469607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 269
Target Start/End: Original strand, 15321394 - 15321486
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnn-gagcgattttgcaccccatctttttgcccc 269  Q
    |||||||||||||||||||  |||||||||  |||||||| |||||||| |||||          ||||||||||||||||||||||||||||||    
T  15321394 cttaattgcacttttcccc--tatcttttgttaattgtgcaattttgcatcccctattttattttgagcgattttgcaccccatctttttgcccc 15321486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 17345736 - 17345788
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||  |||||||||| |||| ||| |||||||||||||||    
T  17345736 ttaattgcacttttcccc--tatcttttgctaattatgcaattttgcaccccctc 17345788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 17346089 - 17346032
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||| ||   |||||||||| ||||||||||||||||||| ||||    
T  17346089 aggcttaattgcactttttcctt-tatcttttgctaattgtgcgattttgcacctcctc 17346032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 40221538 - 40221488
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacccc 228  Q
    |||||| ||||| ||||||||||||| || |||||||||||||||||||||    
T  40221538 aattgcgcttttgccccctatctttttgctaattgtgcgattttgcacccc 40221488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 18750178 - 18750126
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||| |||||| |||  |||| ||||||||||||||||||||||    
T  18750178 gcttaattgcacttctccccc-tatagtttgtcaattgtgcgattttgcacccc 18750126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 32672842 - 32672895
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||||||||   || |||||||||  ||||||||||||||||||||    
T  32672842 ggcttaattgcacttttgttccttatcttttgttaattgtgcgattttgcaccc 32672895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 32673069 - 32673020
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 227  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  32673069 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 32673020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 7980058 - 7980003
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| || | |||  ||||| |||||||||||||||||||||    
T  7980058 aaggcttaattgcactttttcctc-tatagtttgctaattgtgcgattttgcacccc 7980003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 11883751 - 11883799
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 226  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  11883751 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 11883799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 19141898 - 19141853
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||||||||||||  ||||||||  |||||||||||||||||||||||    
T  19141898 ttaattgcacttt--ccccctatagtttgccaattgtgcgattttgca 19141853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 174 - 276
Target Start/End: Complemental strand, 41662457 - 41662354
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcgattttgcaccccatctttttgccccctc 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||     
T  41662457 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcttttttattgagcgattttgcaccccatctttttgccccctt 41662358  T
Q  273 tctg 276  Q
    ||||    
T  41662357 tctg 41662354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 12281121 - 12281222
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcgattttgcaccccatctttttgcccc 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||         ||||||||||||||||||||||||||||||    
T  12281121 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacctcctctttttttttgagcgattttgcaccccatctttttgcccc 12281220  T
Q  270 ct 271  Q
    ||    
T  12281221 ct 12281222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 176 - 271
Target Start/End: Original strand, 765736 - 765832
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcgattttgcaccccatctttttgccccct 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  765736 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccct 765832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 174 - 276
Target Start/End: Complemental strand, 15156239 - 15156136
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcgattttgcaccccatctttttgccccctc 272  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||          |||||||||||||||||||||||||||||||     
T  15156239 ggcttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcaccccctcttttttttttagcgattttgcaccccatctttttgccccctt 15156140  T
Q  273 tctg 276  Q
    ||||    
T  15156139 tctg 15156136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 173 - 276
Target Start/End: Original strand, 16928941 - 16929043
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttttgccccctc 272  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||        ||||| ||||||||||||||||||||||||||     
T  16928941 aggcttaattgcactttccccccctatcttttgctaattgtgcgattttgcaccccctcttttttttgagcg-ttttgcaccccatctttttgccccctt 16929039  T
Q  273 tctg 276  Q
    ||||    
T  16929040 tctg 16929043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 174 - 276
Target Start/End: Original strand, 43245871 - 43245974
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcgattttgcaccccatctttttgccccctc 272  Q
    ||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||     
T  43245871 ggcttaattgcactttttccccctatcttttgataattgtgcgattttgcaccccctcttttttattgagcgattttgcaccccatctttttgccccctt 43245970  T
Q  273 tctg 276  Q
    ||||    
T  43245971 tctg 43245974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 16929296 - 16929207
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttt 263  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||        || |||||||||||||||||||||    
T  16929296 ggcttaattgcacttttctcccctatcttttgctaattgtgcgattttgcaccccctcttttttttgaacgattttgcaccccatctttt 16929207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 37752470 - 37752381
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttt 263  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||        ||||||||||||||||||| ||||    
T  37752470 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctcttttttttgagcgattttgcaccccatatttt 37752381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 9823417 - 9823361
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9823417 aaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 9823361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 172 - 231
Target Start/End: Complemental strand, 43246232 - 43246173
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  43246232 aaggcttaattgcacttttcccccctatcttttgctaattgtgtgattttgcaccccctc 43246173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 15155882 - 15155940
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  15155882 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 15155940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 39724102 - 39724048
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  39724102 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 39724048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 13026634 - 13026687
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13026634 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacc 13026687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 13027332 - 13027281
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13027332 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 13027281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 22851390 - 22851444
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  22851390 ggcttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcacccc 22851444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 37752084 - 37752138
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  37752084 ggcttaattgcacttttcccccctatgttttgctaattgtgcgattttgcacccc 37752138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 12281480 - 12281423
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  12281480 ggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctc 12281423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 276
Target Start/End: Complemental strand, 75016 - 74936
Alignment:
Q  196 ctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttttgccccctctctg 276  Q
    ||||||||||| ||||||||||||||||||||||||         ||||||||||||||||||||||||||||||| ||||    
T  75016 ctatcttttgctaattgtgcgattttgcaccccctctttttttttagcgattttgcaccccatctttttgccccctttctg 74936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 269
Target Start/End: Complemental strand, 3463999 - 3463903
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccct-cnnnnnnnngagcgattttgcaccccatctttttgcccc 269  Q
    |||||||||||||||||||||||||| |||||| ||||||||||| |||||||| || |        ||||||||||||||||||||||||| ||||    
T  3463999 ggcttaattgcacttttcccccctatattttgctaattgtgcgatcttgcaccctctcctttgttttgagcgattttgcaccccatctttttacccc 3463903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 13936721 - 13936776
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  13936721 aaggcttaattgcacttttcccc-ctatcttttaccaattgtgcgattttgcacccc 13936776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 263
Target Start/End: Complemental strand, 18020142 - 18020053
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttt 263  Q
    ||||||||||||||||||| |||  |||||||||  ||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  18020142 aaggcttaattgcacttttaccc--tatcttttgttaattgtgcgattttgcaccccctcttttttttgagcgattttgcaccccatctttt 18020053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 25438794 - 25438846
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  25438794 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 25438846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 13937444 - 13937389
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||    
T  13937444 aggcttaattgcacttttcccccctattttttgtcaattgtgcgaatttgcacccc 13937389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 34498610 - 34498555
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  34498610 aggcttaattgcacttttcccccctatagtttgcaaattgtgcgattttgcacccc 34498555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 37396707 - 37396762
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  |||||| ||||||||||||||||||||    
T  37396707 aggcttaattgcacttttcccccctatagtttgccgattgtgcgattttgcacccc 37396762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 171 - 226
Target Start/End: Original strand, 41662518 - 41662573
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||||||||||||||||||||| |||  |||||||||||||||||||||||||    
T  41662518 aaaggcttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacc 41662573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 9822748 - 9822802
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  9822748 ggcttaattgcacttttcacccctatcttttatcaattgtgcgattttgcacccc 9822802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 23123338 - 23123392
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||    
T  23123338 ggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttacacccc 23123392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 34313765 - 34313852
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttt 263  Q
    |||||||||||||||||||||  |||||||||  ||||||||||||||||||||||||        |||||||||||||||| |||||||    
T  34313765 ggcttaattgcacttttcccc--tatcttttgttaattgtgcgattttgcaccccctcttttttttgagcgattttgcaccctatctttt 34313852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 37397199 - 37397145
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  37397199 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcccccc 37397145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 24473825 - 24473768
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||  ||||||  |||||||||||||||||||||||||||    
T  24473825 aaaggcttaattgcacttttcatccctatagtttgccaattgtgcgattttgcacccc 24473768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 41662105 - 41662164
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||| ||| |||| |||||||||  ||||||||||||||||||||||||    
T  41662105 aaggcttaattgcacattttccccatatcttttgttaattgtgcgattttgcaccccctc 41662164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 3307338 - 3307388
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||||||||||| ||||| ||||||||||||| ||||||||||||||||||    
T  3307338 ggcttaattgcatttttcacccctatcttttgtcaattgtgcgattttgca 3307388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 15042148 - 15042198
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||| ||||| |||||||||||||||||| ||||||||||||    
T  15042148 ttaattgcactttccccccttatcttttgccaattgtgtgattttgcaccc 15042198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 24473343 - 24473397
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||| ||||||||  ||||||||||||| |||||||||||||    
T  24473343 ggcttaattgcactttttccccctatagtttgccaattgtgtgattttgcacccc 24473397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 18019915 - 18019968
Alignment:
Q  179 aattgcacttttcccccctatcttttgcc-aattgtgcgattttgcaccccctc 231  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  18019915 aattgcacttttgccccctatctttttcctaattgtgcgattttgcaccccctc 18019968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 23123572 - 23123514
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||| ||||||||||||||  |||| |||||||||| ||||||||||||||||||||||||    
T  23123572 aaagacttaattgcacttt--ccccttatcttttgctaattgtgcgattttgcaccccctc 23123514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 43162588 - 43162536
Alignment:
Q  178 taattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||| ||||||||| |||| ||||||||||||||||||||    
T  43162588 taattgcacttttccccc-tatcttttgtcaatcgtgcgattttgcaccccctc 43162536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 74688 - 74739
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| || ||||||||| |||||||||||||||||||||    
T  74688 cttaattgcacttttccctcc-atcttttgctaattgtgcgattttgcacccc 74739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 15442765 - 15442817
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||| ||||||||||||| ||| |||||||||| |||||||||||||    
T  15442765 cttaattgcatttttcccccctatatttcgccaattgtgtgattttgcacccc 15442817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 20861694 - 20861638
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||| |||| ||||||||  | |||||||||||||||||||||||||    
T  20861694 aaggcttaattgcattttttccccctatagtctgccaattgtgcgattttgcacccc 20861638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 2856525 - 2856580
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||| | |||||| ||||||  |||||||||||||||||||||||||||    
T  2856525 aggcttaattgtaattttcctccctatagtttgccaattgtgcgattttgcacccc 2856580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 224
Target Start/End: Complemental strand, 6199151 - 6199100
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||||||||||||||||||  ||||||  |||||||||||||||||||||||    
T  6199151 aggcttaattgcacttttcttccctatagtttgccaattgtgcgattttgca 6199100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 15444698 - 15444647
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||| ||||||||  ||| |||||||||||||||||||||||    
T  15444698 ttaattgcactttttccccctataatttaccaattgtgcgattttgcacccc 15444647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 226
Target Start/End: Original strand, 17431284 - 17431339
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||||||||||||||||||||| |||  |||| ||||||||||||||| ||||    
T  17431284 aaaggcttaattgcacttttcccccatatagtttgtcaattgtgcgatttttcacc 17431339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 226
Target Start/End: Complemental strand, 22852009 - 22851958
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||||| | |||||  |||||||||||||||||||||||||||||||||    
T  22852009 gcttaattgtatttttcatccctatcttttgccaattgtgcgattttgcacc 22851958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 34498125 - 34498176
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||| ||||||||  |||| ||||||||||||||||||||||    
T  34498125 ttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacccc 34498176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 9623502 - 9623556
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||| | | ||||  |||||||||||||||||||||||||||    
T  9623502 ggcttaattgcactttttctcactatagtttgccaattgtgcgattttgcacccc 9623556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 6092775 - 6092825
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||||||||||||| |||  |||||||||||||| ||||||||||||||||||    
T  6092775 aaggcttaattgcatttt--ccccctatcttttgtcaattgtgcgattttgca 6092825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 7127660 - 7127708
Alignment:
Q  181 ttgcacttttcccccctatcttttgccaattgtgcgattttgcaccccct 230  Q
    |||||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  7127660 ttgcacttttcccc-ctatcttttgctaattgtgcgattttgcatcccct 7127708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 22786843 - 22786892
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||||||||||||| ||||||||||||| | ||||||| |||||||||||    
T  22786843 ttaattgcactttttccccctatcttttactaattgtgtgattttgcacc 22786892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 43162234 - 43162290
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||||| ||| |||||  ||||||||||||||||||| ||||    
T  43162234 ggcttaattgcacttttccccc-tatattttgttaattgtgcgattttgcacctcctc 43162290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 276
Target Start/End: Original strand, 37752181 - 37752217
Alignment:
Q  240 gagcgattttgcaccccatctttttgccccctctctg 276  Q
    |||||||||||||||||||||||||||||||| ||||    
T  37752181 gagcgattttgcaccccatctttttgccccctttctg 37752217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 9465700 - 9465751
Alignment:
Q  179 aattgcacttttcccccctatc-ttttgccaattgtgcgattttgcaccccc 229  Q
    |||||||||||| ||||||||| |||||| || |||||||||||||||||||    
T  9465700 aattgcacttttgccccctatctttttgctaactgtgcgattttgcaccccc 9465751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 33726696 - 33726743
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgc 223  Q
    ||||||||||||||| ||||||||  ||| ||||||||||||||||||    
T  33726696 cttaattgcactttttccccctatagtttaccaattgtgcgattttgc 33726743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 6198657 - 6198711
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||||||||| ||| |||  | | ||||||||||||||||||||||    
T  6198657 aggcttaattgcacttttctcccatatggtcttccaattgtgcgattttgcaccc 6198711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 9465604 - 9465653
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgatttt 221  Q
    |||||||||||||||||||| || ||||||||||| ||||||||| |||||    
T  9465604 aaaggcttaattgcactttt-cctcctatcttttgtcaattgtgcaatttt 9465653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 11007657 - 11007707
Alignment:
Q  177 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 226  Q
    |||||||||||||| | ||||||||||| ||||||||||||||||| ||||    
T  11007657 ttaattgcacttttgctccctatctttttgccaattgtgcgattttacacc 11007707  T

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Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 43598790 - 43598756
Alignment:
Q  193 cccctatcttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||||| ||||||||||||||||||||    
T  43598790 cccctatcttttgctaattgtgcgattttgcaccc 43598756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 74913 - 74864
Alignment:
Q  177 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcac 225  Q
    ||||||||||||||  |||||||||||| | |||||||||||||||||||    
T  74913 ttaattgcacttttgtcccctatctttttgtcaattgtgcgattttgcac 74864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 231
Target Start/End: Complemental strand, 9465908 - 9465871
Alignment:
Q  194 ccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  9465908 ccctatcttttgttaattgtgcgattttgcaccccctc 9465871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 11007885 - 11007828
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| ||  | |||||||| ||||||||| |||||||| ||||    
T  11007885 aaaggcttaattgcactttcccttcttatcttttaccaattgtgagattttgctcccc 11007828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 15156111 - 15156062
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 227  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  15156111 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 15156062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 33748212 - 33748157
Alignment:
Q  179 aattgcacttttcccccctatctttt---gccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||| |||||||| ||||   || ||||||||||||||||||||||||    
T  33748212 aattgcacttttgccccctatttttttttgctaattgtgcgattttgcaccccctc 33748157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 39723415 - 39723452
Alignment:
Q  187 ttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    ||||| || |||||||||||||||||||||||||||||    
T  39723415 ttttcacctctatcttttgccaattgtgcgattttgca 39723452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 25439181 - 25439126
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||| |||||||||||||| |||| |||  |||| ||||||||||||||||||||||    
T  25439181 aaggtttaattgcactttttcccc-tatagtttgtcaattgtgcgattttgcacccc 25439126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 37752242 - 37752290
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 226  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  37752242 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 37752290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 8e-30; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 174 - 276
Target Start/End: Complemental strand, 20969073 - 20968971
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttttgccccctct 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |         |||||||||||||||||||||||||||||||| |    
T  20969073 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccctttttttttttgagcgattttgcaccccatctttttgcccccttt 20968974  T
Q  274 ctg 276  Q
    |||    
T  20968973 ctg 20968971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 174 - 276
Target Start/End: Original strand, 10293608 - 10293711
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcgattttgcaccccatctttttgccccctc 272  Q
    |||||||||||| ||||  ||||||||||||| |||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||     
T  10293608 ggcttaattgcatttttttcccctatcttttgtcaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctt 10293707  T
Q  273 tctg 276  Q
    ||||    
T  10293708 tctg 10293711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 10293963 - 10293906
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  10293963 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 10293906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 20968715 - 20968775
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  20968715 aaaggcttaattgcacctttcccccctatcttttgttaattgtgcgattttgcaccccctc 20968775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 48159896 - 48159951
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  48159896 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 48159951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 18875245 - 18875155
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcgattttgcaccccatctttt 263  Q
    ||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||         ||||||||||||||||||||||||    
T  18875245 ggcttaattgcacttttgccccctatcttttgctaattgtacgattttgcaccccctctttttttttgagcgattttgcaccccatctttt 18875155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 229
Target Start/End: Complemental strand, 47871178 - 47871121
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 229  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  47871178 aaaggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcaccccc 47871121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 1927772 - 1927825
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  1927772 ggcttaattgcacctttcccccctatcttttgccaattatgcgattttgcaccc 1927825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 17372298 - 17372387
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttt 263  Q
    ||||||||||||| ||| |||||||| |||||| |||||||||||||||||||||||         ||||||||||||||||||||||||    
T  17372298 ggcttaattgcaccttttccccctattttttgctaattgtgcgattttgcaccccctgttttttttgagcgattttgcaccccatctttt 17372387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 53687886 - 53687942
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  53687886 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 53687942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 40849016 - 40848961
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||| ||||  |||||||||||||||||||||||||||    
T  40849016 aggcttaattgcacttttcccctctatagtttgccaattgtgcgattttgcacccc 40848961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 18874881 - 18874935
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  18874881 aggctcaattgcactttttccccctatcttttgctaattgtgcgattttgcaccc 18874935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 45060926 - 45060872
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||| |||||    
T  45060926 aggcttaattgcacttttcacccctatcttttgctaattgtgcgattttacaccc 45060872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 47666389 - 47666335
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  47666389 ggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcacccc 47666335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 48160387 - 48160333
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||| |||||||||  |||||||||||||||||||||||||||    
T  48160387 ggcttaattgcactttccccccctatagtttgccaattgtgcgattttgcacccc 48160333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 8314013 - 8314066
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||||||||| ||||||| ||||| |||||||||||||||||||||    
T  8314013 ggcttaattgcacttttctcccctatattttgtcaattgtgcgattttgcaccc 8314066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 22429159 - 22429211
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  22429159 gcttaattgcacttttctcccctatattttgccaattgtgcgactttgcaccc 22429211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 53766636 - 53766580
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||||||||||||||||||||  ||||| |||||||| |||||||||||    
T  53766636 aaaggcttaattgcacttttcccccctatagtttgcaaattgtgcaattttgcaccc 53766580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 1928484 - 1928434
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  1928484 ttaattgca-ttttcctccctatcttttgccaattgtgcgattttgcacccc 1928434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 17372525 - 17372438
Alignment:
Q  177 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttt 263  Q
    ||||| |||||||| | ||||||||||| |||||||||||||||||||||||||||        |||| |||||||||||||||||||    
T  17372525 ttaatggcacttttgcaccctatctttttgccaattgtgcgattttgcaccccctcttttttttgagcaattttgcaccccatctttt 17372438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 27238951 - 27238900
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||||  |||||||||||||||||||||||||||    
T  27238951 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcacccc 27238900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 8315136 - 8315083
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||    
T  8315136 aggcttaattgcacttt-cccccctatattttgtcaattgtgcgattttgcaccc 8315083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 27238464 - 27238518
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||| ||||||||| |||||  ||||||||||||||||||||||||||    
T  27238464 aggcttaattgtacttttccctcctatagtttgccaattgtgcgattttgcaccc 27238518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 42455789 - 42455839
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgc 223  Q
    |||||||||||||||||||||||||||  |||| |||||||||||||||||    
T  42455789 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 42455839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 42672978 - 42673031
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  42672978 ggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcacccc 42673031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 26007179 - 26007235
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||| |||||||||||||  |||| ||||||||||||||||||||||    
T  26007179 aaaggcttaattgca-ttttcccccctatagtttgtcaattgtgcgattttgcacccc 26007235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 13657673 - 13657621
Alignment:
Q  177 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||  |||||||||||| ||||||||||||||||||||||||    
T  13657673 ttaattgcacttttgtcccctatctttttgccaattgtgcgattttgcacccc 13657621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 14015923 - 14015867
Alignment:
Q  177 ttaattgcactttt-cccccctatctttt-gccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||    
T  14015923 ttaattgcacttttgcccccctatctttttgccaattgtgcgattttgcactccctc 14015867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 21895656 - 21895712
Alignment:
Q  173 aggcttaattgcacttttccccc-ctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| |||| |||| |||||||||||||| |||||||||||||    
T  21895656 aggcttaattgcactttttccccactatgttttgccaattgtgtgattttgcacccc 21895712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 40848519 - 40848574
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||||| ||||||    
T  40848519 aaggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttacacccc 40848574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 45060596 - 45060644
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 222  Q
    ||||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  45060596 ggcttaattgcacttttccccactatcttttgctaattatgcgattttg 45060644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 227
Target Start/End: Original strand, 1100917 - 1100968
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||||| |||||    
T  1100917 cttaattgcacttatccaccctatcttttgcaaattgtgcgatttttcaccc 1100968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 1101236 - 1101182
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||||||||||||| ||||||||||   |||||||||||| |||||    
T  1101236 aggcttaattgcacttttcccccttatcttttgctttttgtgcgatttttcaccc 1101182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 3353128 - 3353181
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  3353128 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacccc 3353181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 3644837 - 3644783
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||| ||||||||| ||| |||||  |||||||||||||||||||||    
T  3644837 ggcttaattgcatttttcccccttattttttgttaattgtgcgattttgcacccc 3644783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 10348853 - 10348799
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||| || | |||  |||||||||||||||||||||||||||    
T  10348853 ggcttaattgcactttttcctcatatagtttgccaattgtgcgattttgcacccc 10348799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 24485513 - 24485460
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||| |||  |||||||||||||||||||||||||||    
T  24485513 ggcttaattgcacttttctccc-tatagtttgccaattgtgcgattttgcacccc 24485460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 42673349 - 42673296
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||| |||  |||| ||||||||||||||||||||||    
T  42673349 ggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacccc 42673296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 4947263 - 4947312
Alignment:
Q  178 taattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||||| ||||||| |||||  ||||||||||||||||||||    
T  4947263 taattgcacttttcacccctattttttgttaattgtgcgattttgcaccc 4947312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 4947386 - 4947439
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||| ||| ||||||||| ||||||||||||||||||||| |||||    
T  4947386 aattgcacttttgccctctatctttttgccaattgtgcgattttgcactccctc 4947439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 17441119 - 17441066
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcac 225  Q
    |||||||||||||| |||||| | ||||||||||  ||||||||||||||||||    
T  17441119 aaggcttaattgcatttttcctctctatcttttgttaattgtgcgattttgcac 17441066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 47665910 - 47665963
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||||||||||||||||| |||| |||  |||| ||||||||||||||||||||    
T  47665910 aggcttaattgcactttttccccttatagtttgtcaattgtgcgattttgcacc 47665963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 18875017 - 18875065
Alignment:
Q  179 aattgcacttttcccccctatc-ttttgccaattgtgcgattttgcacc 226  Q
    |||||||||||| ||||||||| |||||| |||||||||||||||||||    
T  18875017 aattgcacttttgccccctatctttttgctaattgtgcgattttgcacc 18875065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 26007670 - 26007622
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcac 225  Q
    |||||||||||||| ||||||||  |||||||||||| |||||||||||    
T  26007670 ttaattgcactttttccccctatagtttgccaattgtacgattttgcac 26007622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 1101141 - 1101087
Alignment:
Q  177 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||| |||| |||||||| | |||||||||||||||||||||||||    
T  1101141 ttaattgcacttttgcccc-tatctttttgtcaattgtgcgattttgcaccccctc 1101087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 9026860 - 9026907
Alignment:
Q  179 aattgcacttttcccccctatc-ttttgccaattgtgcgattttgcac 225  Q
    |||||||||||| ||||||||| |||||| ||||||||||||||||||    
T  9026860 aattgcacttttgccccctatctttttgctaattgtgcgattttgcac 9026907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 13657445 - 13657500
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 229  Q
    ||||||||| |||||||| |||   | |||||||||||||||||||||||||||||    
T  13657445 ggcttaattacacttttctccctatttttttgccaattgtgcgattttgcaccccc 13657500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 14016014 - 14015964
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||  || |||||||||| |||||||||||||||||||||    
T  14016014 ttaattgcacttttcatcc-tatcttttgctaattgtgcgattttgcacccc 14015964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 241 - 276
Target Start/End: Original strand, 18874957 - 18874992
Alignment:
Q  241 agcgattttgcaccccatctttttgccccctctctg 276  Q
    ||||||||||||||||||||||||||||||| ||||    
T  18874957 agcgattttgcaccccatctttttgccccctttctg 18874992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 23630086 - 23630035
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||| || ||||| |||||  |||||||||||||||||||||    
T  23630086 ttaattgcactttttcctcctattttttggtaattgtgcgattttgcacccc 23630035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 36181045 - 36180990
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||| ||||||  ||||  ||||||||||||||| |||||    
T  36181045 aggcttaattgcacttttcctccctatagtttgttaattgtgcgattttgtacccc 36180990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 47870811 - 47870877
Alignment:
Q  162 taattttacaaaggcttaattgcacttttcccccctatcttttgccaattgtgcg-attttgcacccc 228  Q
    |||||||| | ||||||||||||||||||  |||||||||||||| |||| |||| ||||||||||||    
T  47870811 taattttaaataggcttaattgcactttt-tcccctatcttttgctaattatgcgaattttgcacccc 47870877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 53688356 - 53688306
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcac 225  Q
    |||||||||||||||| | |||||||  ||||||||||||||||||||||||    
T  53688356 ggcttaattgcacttt-ctcccctatagtttgccaattgtgcgattttgcac 53688306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 53766166 - 53766217
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||| || |||||  |||| ||||||||||||||||||||||    
T  53766166 ttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcacccc 53766217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 9027086 - 9027033
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||| |||||||||||| |||||||||| |||||||| ||||| ||||||    
T  9027086 ggcttaatttcacttttccccc-tatcttttgctaattgtgcaattttacacccc 9027033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 17372645 - 17372594
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||  ||| |||| | |||||||||||||||||||||    
T  17372645 gcttaattgcacttttcccc--tatattttactaattgtgcgattttgcacccc 17372594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 21896564 - 21896511
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||| |||| |||| ||| ||||| ||||||||||||||||||||||    
T  21896564 ggcttaattgcattttttcccc-tatattttgtcaattgtgcgattttgcacccc 21896511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 26540694 - 26540747
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||| |||| ||| ||||| ||||||||| |||||||||||||||    
T  26540694 ttaattgcacttttgcccc-tattttttgtcaattgtgcaattttgcaccccctc 26540747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 42627599 - 42627550
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||||||||||||||||||| | |||||||||| ||||||| |||||||||    
T  42627599 ggcttaattgcacttttccctc-tatcttttgctaattgtgtgattttgca 42627550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 3353597 - 3353553
Alignment:
Q  181 ttgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||||||||||| |||  |||||||||||||||||||||||||    
T  3353597 ttgcacttttccccc-tatagtttgccaattgtgcgattttgcacc 3353553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 20968946 - 20968897
Alignment:
Q  179 aattgcacttttcccccctatc-ttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||| |||| |||| |||||| ||||||||||||||||||||    
T  20968946 aattgcacttttgccccttatcattttgctaattgtgcgattttgcaccc 20968897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 3644772 - 3644720
Alignment:
Q  177 ttaattgcacttttcccccctatctt-ttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||| ||| ||||| | |||| |||||||||||||||||||||    
T  3644772 ttaattgcacttttgccctctatcctcttgctaattgtgcgattttgcacccc 3644720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 22429647 - 22429596
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||| ||| |||||  |||| ||||||||||||||||||||||    
T  22429647 cttaattgcacttt-ccctcctatagtttgtcaattgtgcgattttgcacccc 22429596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 173 - 276
Target Start/End: Complemental strand, 3404044 - 3403940
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcgattttgcaccccatctttttgccccct 271  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  3404044 aggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccct 3403945  T
Q  272 ctctg 276  Q
     ||||    
T  3403944 ttctg 3403940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 171 - 276
Target Start/End: Original strand, 21031976 - 21032081
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcgattttgcaccccatctttttgcccc 269  Q
    ||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||         ||||||||||||||||||||||||||||||    
T  21031976 aaaggcttaattgcacttttccccc-taacttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgcccc 21032074  T
Q  270 ctctctg 276  Q
    || ||||    
T  21032075 ctttctg 21032081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 18241851 - 18241911
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  18241851 aaaggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 18241911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 174 - 276
Target Start/End: Complemental strand, 18242210 - 18242107
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcgattttgcaccccatctttttgccccctc 272  Q
    |||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||     
T  18242210 ggcttaattgcattttttttccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctt 18242111  T
Q  273 tctg 276  Q
    ||||    
T  18242110 tctg 18242107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 33829691 - 33829636
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33829691 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 33829636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 3403717 - 3403771
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3403717 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacccc 3403771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 33828990 - 33829044
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33828990 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 33829044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 30388413 - 30388315
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttttgccccctctctg 276  Q
    ||||||| |||||| ||||||||||||||| |||||||||||||||||||||||         ||||||||||||||||||||||||| |||||| ||||    
T  30388413 ttaattgtactttttccccctatcttttgctaattgtgcgattttgcaccccct-ttttttttgagcgattttgcaccccatctttttaccccctttctg 30388315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 11656836 - 11656746
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcgattttgcaccccatctttt 263  Q
    |||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||         ||||||||||||||||||||||||    
T  11656836 ggcttaattgcacttttctctcctatcttttgctaattgtgcgattttgcaccccctctttatttttgagcgattttgcaccccatctttt 11656746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 30388062 - 30388150
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttt 263  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||| || |||        ||||||||||||||||||||||||    
T  30388062 ggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcagcctctcttttttttgagcgattttgcaccccatctttt 30388150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 7654604 - 7654548
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  7654604 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 7654548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 10039675 - 10039729
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  10039675 aggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacccc 10039729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 10087912 - 10087858
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||| |  |||||||||||||||||||||||||||    
T  10087912 ggcttaattgcacttttcccccctttagtttgccaattgtgcgattttgcacccc 10087858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 271
Target Start/End: Complemental strand, 13579705 - 13579608
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttttgccccct 271  Q
    ||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||||         |||||||||||||||||| |||||| |||||    
T  13579705 aggcttaattgcacttttctccc-tatcgtttgctaattgtgcgattttgcaccccctcgttttttttagcgattttgcaccccatttttttggcccct 13579608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 21032335 - 21032285
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgc 223  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  21032335 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgc 21032285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 33974353 - 33974299
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||| |||||||||||||  |||||||||||||||||||||||||||    
T  33974353 ggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcacccc 33974299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 3825530 - 3825583
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  3825530 ttaattgcacttttccccc-tatattttgctaattgtgcgattttgcaccccctc 3825583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 2762611 - 2762664
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  2762611 aattgcacttttgccccctatctttttgctaattgtgcgattttgcaccccctc 2762664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 10039893 - 10039840
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  10039893 aattgcacttttgccccctatctttttgctaattgtgcgattttgcaccccctc 10039840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 29074428 - 29074372
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||| |||| |||||||||  |||||||||||||||||||||||||||    
T  29074428 aaaggcttaattgctcttt-cccccctatagtttgccaattgtgcgattttgcacccc 29074372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 29079192 - 29079136
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||| |||| |||||||||  |||||||||||||||||||||||||||    
T  29079192 aaaggcttaattgctcttt-cccccctatagtttgccaattgtgcgattttgcacccc 29079136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 29107001 - 29106945
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||| |||| |||||||||  |||||||||||||||||||||||||||    
T  29107001 aaaggcttaattgctcttt-cccccctatagtttgccaattgtgcgattttgcacccc 29106945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 12714436 - 12714488
Alignment:
Q  179 aattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||| ||||||||||||||  ||||||||||||||||| ||||||    
T  12714436 aattgcacttttgccccctatcttttgttaattgtgcgattttgcagcccctc 12714488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 23250589 - 23250648
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||| |||| ||||||||| |||||||| ||| ||||||||||||    
T  23250589 aaaggcttaattgcactttttcccc-tatcttttgtcaattgtgagatcttgcaccccctc 23250648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 231
Target Start/End: Original strand, 21032107 - 21032158
Alignment:
Q  181 ttgcacttttcccccctatctt-ttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||||||||    
T  21032107 ttgcacttttgccccctatcttcttgtcaattgtgcgattttgcaccccctc 21032158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 32734047 - 32734000
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||||    
T  32734047 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgca 32734000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 2354867 - 2354810
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||| |||||||  ||||  |||| ||||||||||||||||||||||    
T  2354867 aaaggcttaattgcatttttcccgtctatagtttgtcaattgtgcgattttgcacccc 2354810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 33655170 - 33655114
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 229  Q
    ||||||||||||||||| |||||  |||||||||| |||||||| |||||||||||||    
T  33655170 aaggcttaattgcacttgtcccct-tatcttttgctaattgtgcaattttgcaccccc 33655114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 33971994 - 33972082
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttt 263  Q
    |||||||||||| |||| |||| |||||||||  |||||| |||||||||||||||||        |||||||||||||||| |||||||    
T  33971994 ggcttaattgcagtttttcccc-tatcttttgttaattgtacgattttgcaccccctcttatttttgagcgattttgcaccctatctttt 33972082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 11656608 - 11656660
Alignment:
Q  179 aattgcacttttcccccctatc-ttttgccaattgtgcgattttgcaccccct 230  Q
    |||||||||||| ||||||||| |||||  |||||||||||||||||||||||    
T  11656608 aattgcacttttgccccctatcgttttgataattgtgcgattttgcaccccct 11656660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 271
Target Start/End: Complemental strand, 31598328 - 31598229
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc-cctcnnnnnnnngagcgattttgcaccccatctttttgccccc 270  Q
    |||||||||||| | ||||||| | |||||||||| ||||||||||||||||||||  ||         |||| ||||||||||||||||||||||||||    
T  31598328 aaggcttaattgtatttttccctc-tatcttttgctaattgtgcgattttgcacccttcttttttttttgagcaattttgcaccccatctttttgccccc 31598230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 31598783 - 31598732
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||| ||||||||||||||||||| |||||||||  |||||||||||||||||    
T  31598783 aaggtttaattgcacttttccccc-tatcttttgttaattgtgcgattttgca 31598732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 22684411 - 22684358
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||  |||  ||||||||||||| |||||||||||||    
T  22684411 ggcttaattgcacttttcccct-tatagtttgccaattgtgtgattttgcacccc 22684358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 22754657 - 22754710
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||  |||  ||||||||||||| |||||||||||||    
T  22754657 ggcttaattgcacttttcccct-tatagtttgccaattgtgtgattttgcacccc 22754710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 2762500 - 2762581
Alignment:
Q  191 cccccctatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcgattttgcaccccatctttttgccccct 271  Q
    |||||| || |||||| ||||||||||||||||||||||||         ||| ||||||||||| ||||||||||||||||    
T  2762500 ccccccaattttttgctaattgtgcgattttgcaccccctctttttttttgagtgattttgcacctcatctttttgccccct 2762581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 3403915 - 3403867
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 226  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  3403915 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 3403867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 30388290 - 30388242
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 226  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  30388290 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 30388242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 31598201 - 31598157
Alignment:
Q  178 taattgcacttttcccccctatc-ttttgccaattgtgcgatttt 221  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||||    
T  31598201 taattgcacttttgccccctatctttttgtcaattgtgcgatttt 31598157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 31598685 - 31598641
Alignment:
Q  178 taattgcacttttcccccctatc-ttttgccaattgtgcgatttt 221  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||||    
T  31598685 taattgcacttttgccccctatctttttgtcaattgtgcgatttt 31598641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 64; Significance: 5e-28; HSPs: 3)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 174 - 276
Target Start/End: Complemental strand, 1474 - 1371
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcgattttgcaccccatctttttgccccctc 272  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||     
T  1474 ggcttaattgcactttttccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctt 1375  T
Q  273 tctg 276  Q
    ||||    
T  1374 tctg 1371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 1118 - 1175
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||    
T  1118 ggcttaattgcactttttccccctatcttttgttaattgtgcgattttgcaccccctc 1175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 1346 - 1297
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 227  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  1346 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 1297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 25425 - 25327
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcgattttgcaccccatctttttgcccc 269  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||         ||||||||||||||||||||||||||||||    
T  25425 aaggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgcccc 25327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 25295 - 25247
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 226  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  25295 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 25247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 276
Target Start/End: Complemental strand, 45861 - 45758
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcgattttgcaccccatctttttgccccct 271  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||    
T  45861 aggcttaattgcacttttccccc-tatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccct 45763  T
Q  272 ctctg 276  Q
     ||||    
T  45762 ttctg 45758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 45535 - 45593
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||| ||||||||||  |||||||||||||||||| |||||    
T  45535 aaggcttaattgcacttttcccc-ctatcttttgttaattgtgcgattttgcactccctc 45593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 3e-26; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 18433373 - 18433281
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttt 263  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  18433373 aaaggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctcttttttttgagcgattttgcaccccatctttt 18433281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 276
Target Start/End: Original strand, 25115756 - 25115860
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc-tcnnnnnnnngagcgattttgcaccccatctttttgccccct 271  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |         ||||||||||||||||||||||||||||||||    
T  25115756 aggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcaccccctttttttttttgagcgattttgcaccccatctttttgccccct 25115855  T
Q  272 ctctg 276  Q
     ||||    
T  25115856 ttctg 25115860  T

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Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 276
Target Start/End: Original strand, 25174848 - 25174952
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc-tcnnnnnnnngagcgattttgcaccccatctttttgccccct 271  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |         ||||||||||||||||||||||||||||||||    
T  25174848 aggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcaccccctttttttttttgagcgattttgcaccccatctttttgccccct 25174947  T
Q  272 ctctg 276  Q
     ||||    
T  25174948 ttctg 25174952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 174 - 276
Target Start/End: Original strand, 18433015 - 18433118
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcgattttgcaccccatctttttgccccctc 272  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||         ||||||||||||||||||||||||||||||||     
T  18433015 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccccatctttttgccccctt 18433114  T
Q  273 tctg 276  Q
    ||||    
T  18433115 tctg 18433118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 172 - 276
Target Start/End: Original strand, 26020448 - 26020553
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcgattttgcaccccatctttttgccccc 270  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||         ||||||||||||||| |||||||||||||||    
T  26020448 aaggcttaattgcacttttcctccctatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccgcatctttttgccccc 26020547  T
Q  271 tctctg 276  Q
    | ||||    
T  26020548 tttctg 26020553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 34576870 - 34576968
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttttgccccctctctg 276  Q
    ||||||||||||| |||||||||||||||| |||||||||||||| |||||| ||        |||||||||||||||||||||||||||||||| ||||    
T  34576870 ttaattgcacttt-cccccctatcttttgctaattgtgcgattttacaccccatcttttttttgagcgattttgcaccccatctttttgccccctttctg 34576968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 18817665 - 18817611
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18817665 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 18817611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 25175206 - 25175148
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  25175206 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 25175148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 173 - 229
Target Start/End: Complemental strand, 25116116 - 25116060
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 229  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  25116116 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccc 25116060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 12498566 - 12498621
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  12498566 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 12498621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 12498983 - 12498928
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  12498983 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 12498928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 18816951 - 18817006
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  18816951 aggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 18817006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 26571219 - 26571164
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  26571219 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 26571164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 19515020 - 19514963
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  19515020 aaaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 19514963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 11351478 - 11351427
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  11351478 ttaattgcacttttcactcctatcttttgccaattgtgcgattttgcacccc 11351427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 224
Target Start/End: Complemental strand, 16466797 - 16466746
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  16466797 aggcttaattgcacttttcccccctatattttgctaattgtgcgattttgca 16466746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 16726084 - 16726135
Alignment:
Q  180 attgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  16726084 attgcacttttgccccctatcttttgccaattgtgcgattttgcacctcctc 16726135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 21207229 - 21207280
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  21207229 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 21207280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 22428933 - 22428987
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  22428933 aggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcacccc 22428987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 33324893 - 33324835
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||  ||||||||||||| |||||||| ||||||||||||||||    
T  33324893 aggcttaattgcacttttttcccctatcttttgtcaattgtgtgattttgcaccccctc 33324835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 11350805 - 11350861
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||    
T  11350805 aaaggcttaattgcatttttcacccctatcttttgccaattgtgc-attttgcacccc 11350861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 34577217 - 34577129
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttt 263  Q
    ||||||||||||||||| |||| |||||||||| ||||||| ||||||||||||| ||        ||||||||||||||||||||||||    
T  34577217 ggcttaattgcactttttcccc-tatcttttgctaattgtgtgattttgcaccccatcttttttttgagcgattttgcaccccatctttt 34577129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 22429250 - 22429196
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||    
T  22429250 aggcttaattgcatttttccccc-tatcttttgctaattgtgcgattttgcacccc 22429196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 26570728 - 26570783
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||| ||||||||||||||||  |||| ||||||||||||||||||||||    
T  26570728 aggcttaattacacttttcccccctatagtttgtcaattgtgcgattttgcacccc 26570783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 226
Target Start/End: Complemental strand, 34147567 - 34147512
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||||||||||||||||||| ||||||||  |||| ||||||||||||||||||||    
T  34147567 aaaggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacc 34147512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 3888239 - 3888293
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||| ||||||||||||  |||||||||||| ||||||||||||||    
T  3888239 ggcttaattgcacatttcccccctatagtttgccaattgtacgattttgcacccc 3888293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 2817146 - 2817199
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    ||||| |||||||||||||||| ||||||  |||||||||||||||||||||||    
T  2817146 aaaggtttaattgcacttttcctccctatagtttgccaattgtgcgattttgca 2817199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 5187885 - 5187828
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccct 230  Q
    |||||||||||||||||| |||| |||||||||  |||||||| ||||||||||||||    
T  5187885 aggcttaattgcacttttgccccttatcttttgttaattgtgcaattttgcaccccct 5187828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 22729492 - 22729440
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||| |||  |||||||||||||||||||||||||||    
T  22729492 gcttaattgcacttttccccc-tataatttgccaattgtgcgattttgcacccc 22729440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 31569910 - 31569958
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  31569910 ttaattgcacttttcccc-ctatcttttgtcaattgtgcgattttgcacc 31569958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 37610199 - 37610255
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||| ||||||||  ||||||||||||| |||||||||||||    
T  37610199 aaaggcttaattgcactttt-ccccctatagtttgccaattgtgtgattttgcacccc 37610255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 37780317 - 37780373
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||| ||||||||  ||||||||||||| |||||||||||||    
T  37780317 aaaggcttaattgcactttt-ccccctatagtttgccaattgtgtgattttgcacccc 37780373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 41383223 - 41383167
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||| ||||||||||| ||| |||||| |||||||||||||||||||||    
T  41383223 aaaggcttaattgaacttttccccc-tattttttgctaattgtgcgattttgcacccc 41383167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 37780796 - 37780744
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||||||||| |||||||||||||||  ||||| |||||||||||||||||||    
T  37780796 ggcttaattgtacttttcccccctatagtttgctaattgtgcgattttgcacc 37780744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 9869790 - 9869735
Alignment:
Q  177 ttaattgcacttttcccccctatcttttg-ccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||| |||||| ||||||  ||||||||||||||||||||||||||    
T  9869790 ttaattgcacttttgccccctgtctttttaccaattgtgcgattttgcaccccctc 9869735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 19514525 - 19514580
Alignment:
Q  174 ggcttaattgcacttttcccccc-tatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||| |||||| |||  |||||||||||||||||||||||||||    
T  19514525 ggcttaattgcactttcccccccctatagtttgccaattgtgcgattttgcacccc 19514580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 41382896 - 41382945
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||| |||||||||||||||||||  ||||||||||||||||||||    
T  41382896 ttaattgca-ttttcccccctatcttttgttaattgtgcgattttgcaccc 41382945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 3888719 - 3888662
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||| ||||||||||||||||| | |||  |||||||||||| ||||||||||||||    
T  3888719 aaaggtttaattgcacttttccctcttataatttgccaattgtacgattttgcacccc 3888662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 9665879 - 9665792
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttt 263  Q
    ||||||||| |||||||||||| |||||||||| |||||||| ||||||||||| ||         ||||||||||||||||||||||||    
T  9665879 ggcttaattccacttttccccc-tatcttttgctaattgtgc-attttgcacccactattttttttgagcgattttgcaccccatctttt 9665792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 9869557 - 9869611
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||| |||||||||||||||| ||||||  ||||| ||||||||||||||||||||    
T  9869557 aaaggtttaattgcacttttcctccctat--tttgctaattgtgcgattttgcaccc 9869611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 23011079 - 23011131
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||| ||||||||  |||||||||| ||||||||||||||||||||    
T  23011079 ggcttaattgcatttttcccct-tatcttttgctaattgtgcgattttgcaccc 23011131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 43463753 - 43463809
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||| ||||||||||||||||||  |||  |||||||||||||||||||||||||||    
T  43463753 aaaggtttaattgcacttttcccct-tatagtttgccaattgtgcgattttgcacccc 43463809  T

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Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 43464246 - 43464194
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||||||    
T  43464246 aggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacc 43464194  T

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Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 9665560 - 9665609
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||  |||||||||| |||||||| ||||||||||||    
T  9665560 ttaattgcacttttcccc--tatcttttgctaattgtgcaattttgcacccc 9665609  T

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Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 23011309 - 23011261
Alignment:
Q  177 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgca 224  Q
    ||||||||| |||| ||||||||||||| ||||||||||||||||||||    
T  23011309 ttaattgcaattttgccccctatcttttagccaattgtgcgattttgca 23011261  T

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Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 25940518 - 25940574
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||||| ||||  |||||||  |||| |||||||||||||||||||||    
T  25940518 aaaggcttaattgcatttttttcccctatagtttgtcaattgtgcgattttgcaccc 25940574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 12441242 - 12441187
Alignment:
Q  177 ttaattgcacttttcccccctatc-ttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||| ||||||||| ||||| |||||||||||||||| || |||||    
T  12441242 ttaattgcacttttgccccctatctttttgtcaattgtgcgattttgtactccctc 12441187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 12441364 - 12441320
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattt 220  Q
    |||||||||||||||||||||  |||||||||| |||||||||||||    
T  12441364 ggcttaattgcacttttcccc--tatcttttgctaattgtgcgattt 12441320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 10098519 - 10098569
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    ||||||||||||||||| || |||||  |||| ||||||||||||||||||    
T  10098519 ggcttaattgcactttttcctcctatagtttgtcaattgtgcgattttgca 10098569  T

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Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 276
Target Start/End: Complemental strand, 22429210 - 22429176
Alignment:
Q  242 gcgattttgcaccccatctttttgccccctctctg 276  Q
    |||||||||||||||||||||||||||||| ||||    
T  22429210 gcgattttgcaccccatctttttgccccctttctg 22429176  T

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Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 5187548 - 5187605
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||| ||| ||  ||||||| |||||| ||| |||||||||||||||||    
T  5187548 aaaggcttaattgtactcttttcccctattttttgctaatcgtgcgattttgcacccc 5187605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 25115885 - 25115934
Alignment:
Q  179 aattgcacttttcccccctatc-ttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||| |||| |||| |||||| ||||||||||||||||||||    
T  25115885 aattgcacttttgccccttatcattttgctaattgtgcgattttgcaccc 25115934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 25174977 - 25175026
Alignment:
Q  179 aattgcacttttcccccctatc-ttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||| |||| |||| |||||| ||||||||||||||||||||    
T  25174977 aattgcacttttgccccttatcattttgctaattgtgcgattttgcaccc 25175026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 34576991 - 34577040
Alignment:
Q  177 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcac 225  Q
    |||||||||||||| |||| |||||||| || ||||||||||||||||||    
T  34576991 ttaattgcacttttgccccttatctttttgctaattgtgcgattttgcac 34577040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 11317030 - 11316974
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||| ||||||||||||||  || || |  |||||||||||||||||||||||||||    
T  11317030 aaggtttaattgcacttttttcctctgtactttgccaattgtgcgattttgcacccc 11316974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 18433143 - 18433191
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 226  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  18433143 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 18433191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 228
Target Start/End: Original strand, 34147132 - 34147193
Alignment:
Q  165 ttttacaaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||| |||||||||||||||||||||||   |||  |||  ||||||||||||||||||||||    
T  34147132 ttttataaaggcttaattgcacttttccct--tatagtttatcaattgtgcgattttgcacccc 34147193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 37610671 - 37610620
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||||||||| ||||| |||||||||  ||||| |||||||||||||||||||    
T  37610671 ggcttaattgtacttt-cccccctatagtttgctaattgtgcgattttgcacc 37610620  T

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Target: scaffold0319 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 6392 - 6451
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6392 aaggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 6451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 174 - 276
Target Start/End: Complemental strand, 6750 - 6648
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcgattttgcaccccatctttttgccccctc 272  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||     
T  6750 ggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttttgccccctt 6652  T
Q  273 tctg 276  Q
    ||||    
T  6651 tctg 6648  T

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Target: scaffold0319; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 6623 - 6575
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 226  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  6623 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 6575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 3e-23; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 174 - 276
Target Start/End: Complemental strand, 16555871 - 16555768
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcgattttgcaccccatctttttgccccctc 272  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||         ||||||||||||||||||||||||||||||||     
T  16555871 ggcttaattgcacttttcccccttatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccccatctttttgccccctt 16555772  T
Q  273 tctg 276  Q
    ||||    
T  16555771 tctg 16555768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 56505692 - 56505747
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56505692 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 56505747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 276
Target Start/End: Complemental strand, 3930534 - 3930431
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcgattttgcaccccatctttttgccccct 271  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||          |||||||||||||||||||||||||||||||    
T  3930534 aggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcaccccctcttttttttttagcgattttgcaccccatctttttgccccct 3930436  T
Q  272 ctctg 276  Q
     ||||    
T  3930435 ttctg 3930431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 13198963 - 13198903
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  13198963 aaaggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctc 13198903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 50678778 - 50678833
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  50678778 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 50678833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 177 - 276
Target Start/End: Original strand, 13198606 - 13198707
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc--nnnnnnnngagcgattttgcaccccatctttttgccccctctc 274  Q
    ||||||||||||||| ||  |||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||| ||    
T  13198606 ttaattgcacttttctcctttatcttttgccaattgtgcgattttgcaccccctcttttttttttgagcgattttgcaccccatctttttgccccctttc 13198705  T
Q  275 tg 276  Q
    ||    
T  13198706 tg 13198707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 24775840 - 24775783
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  24775840 aaaggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttgcacccc 24775783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 36095814 - 36095871
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  36095814 aaaggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 36095871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 49178866 - 49178813
Alignment:
Q  178 taattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  49178866 taattgcacttttctcccctatcttttgccaattgtgcgattttgcaccccctc 49178813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 28196829 - 28196773
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  28196829 aaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 28196773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 35393832 - 35393741
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttt 263  Q
    ||||||||||||||||||||| ||| |||||||||| |||||||||| |||||||||||||        ||||||||||||||||||||||||    
T  35393832 aaaggcttaattgcacttttcaccc-tatcttttgctaattgtgcgaatttgcaccccctcttttttatgagcgattttgcaccccatctttt 35393741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 231
Target Start/End: Complemental strand, 18077258 - 18077199
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  18077258 aaggcttaattgcacttttcacccctattttttgctaattgtgcgattttgcaccccctc 18077199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 28196345 - 28196400
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  28196345 aggcttaattgcacttttcccccctataatttgccaattgtgcgattttgcacccc 28196400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 36096526 - 36096475
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36096526 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacccc 36096475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 16555514 - 16555572
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  16555514 aggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctc 16555572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 32703704 - 32703650
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  32703704 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 32703650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 50679478 - 50679424
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  50679478 ggcttaattgcacttttcacccctatcttttgccaattgtacgattttgcacccc 50679424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 8181992 - 8182049
Alignment:
Q  175 gcttaattgcacttttcccccctatc-ttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  8181992 gcttaattgcacttttgccccctatcgttttgccaattgtgcgattttgcaccccctc 8182049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 25161879 - 25161932
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  25161879 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacccc 25161932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 26207803 - 26207746
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||    
T  26207803 aaaggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcacccc 26207746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 32703222 - 32703279
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  32703222 aaaggcttaattgcacttttcccccctataatttgccaattgtgcgattatgcacccc 32703279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 9023736 - 9023680
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  9023736 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 9023680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 9380796 - 9380744
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcac 225  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  9380796 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcac 9380744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 22681576 - 22681631
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  22681576 gcttaattgcacttt-cccccctatcttttgtcaattgtgcgattttgcaccccctc 22681631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 43051308 - 43051252
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||    
T  43051308 aaggcttaattgcatttttcacccctatcttttgccaattgtgtgattttgcacccc 43051252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 54508812 - 54508904
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttt 263  Q
    |||||||||||||||||||| || || ||||||||||||||||| |||||||||||| |||        |||||||||||||||| |||||||    
T  54508812 aaaggcttaattgcactttttcctccaatcttttgccaattgtgtgattttgcaccctctcttttttttgagcgattttgcaccctatctttt 54508904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 9023243 - 9023298
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||||||||||||    
T  9023243 aggcttaattgcacttttctcccctatagtttgccaattgtgcgattttgcacccc 9023298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 39744520 - 39744465
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  39744520 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcacccc 39744465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 169010 - 169068
Alignment:
Q  171 aaaggcttaattgcacttttc-ccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||    
T  169010 aaaggcttaattgcacttttctccccctatagtttgccaattgtgcgattttgcacccc 169068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 4239420 - 4239366
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||| ||||||||  |||||||||||||||||||||||||||    
T  4239420 ggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcacccc 4239366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 9380307 - 9380361
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  9380307 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcccccc 9380361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 293274 - 293217
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||| ||||||||  |||| ||||||||||||||||||||||    
T  293274 aaaggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacccc 293217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 11241389 - 11241478
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttt 263  Q
    ||||||||||||||||||| || |||||||||  ||||||||||||||||| ||||||        |||||||||||||||| |||||||    
T  11241389 ggcttaattgcacttttcctccttatcttttgttaattgtgcgattttgcatcccctcttttttttgagcgattttgcaccctatctttt 11241478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 11529169 - 11529222
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  11529169 gcttaattgcacttttcctccctaacttttgccaattgtgtgattttgcacccc 11529222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 8488534 - 8488447
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttt 263  Q
    ||||||||||||||||| ||  |||||||| | ||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  8488534 gcttaattgcacttttcgcct-tatctttttctaattgtgcgattttgcaccccctcttttttttgagcgattttgcaccccatctttt 8488447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 26207359 - 26207414
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| |||||||||  |||||||||||||||||||||||||||    
T  26207359 aaggcttaattgcacttt-cccccctatagtttgccaattgtgcgattttgcacccc 26207414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 43050605 - 43050661
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||| |||||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  43050605 aaggtttaattgcacttttcatccctatcttttaccaattgtgcgattttgcacccc 43050661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 224
Target Start/End: Original strand, 292781 - 292832
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||    
T  292781 aggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgca 292832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 11241715 - 11241661
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||    
T  11241715 aggcttaattgtacttttccccc-tatcttttgccaattgtgggattttgcacccc 11241661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 25225454 - 25225399
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||||||| |  | |||||||||||||||||||||||||||||||||    
T  25225454 aaggcttaattgcacttctgtctcctatcttttgccaattgtgcgattttgcaccc 25225399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 45830251 - 45830196
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||| ||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  45830251 aggcttaatcgcacttttcacccctatcttttgtcaattgtgcgattttacacccc 45830196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 169493 - 169439
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||| |||||||||||||  |||| ||||||||||||||||||||||    
T  169493 ggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcacccc 169439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 8182229 - 8182171
Alignment:
Q  172 aaggcttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccc 229  Q
    |||||||||||||||||||| ||||||| |||| || ||||||||||||||||||||||    
T  8182229 aaggcttaattgcacttttcacccctatttttttgctaattgtgcgattttgcaccccc 8182171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 49178644 - 49178694
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacccc 228  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  49178644 aattgcacttttgccccctatctttttgccaattgtgcgattttgcacccc 49178694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 22681934 - 22681881
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||||||||||||||||| |||||||||||  |||||||| ||||||||||    
T  22681934 aggcttaattgcacttttccctcctatcttttgttaattgtgcaattttgcacc 22681881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 23540306 - 23540253
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||||||||| |||||||  |||| |||||||||||||||||||||    
T  23540306 ggcttaattgcacttttcacccctatagtttgtcaattgtgcgattttgcaccc 23540253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 27304943 - 27304890
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  27304943 aattgcactttttccccctatctttttgctaattgtgcgattttgcaccccctc 27304890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 56506629 - 56506580
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttg 222  Q
    ||||||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  56506629 aggcttaattgcacttttcacccttatcttttgccaattgtgcaattttg 56506580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 23539840 - 23539893
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||  ||||||||  |||||||||||||||||||||||||||    
T  23539840 aggcttaattgcacttt--ccccctatagtttgccaattgtgcgattttgcacccc 23539893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 39086677 - 39086625
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||||||||||||||||| ||| |||  |||||||||||||||||||||||||    
T  39086677 ggcttaattgcacttttctcccatatagtttgccaattgtgcgattttgcacc 39086625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 45828991 - 45829047
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||| ||||||| | |||||||||| ||||||||||||||||| ||||    
T  45828991 aaaggcttaattgtacttttcactcctatcttttaccaattgtgcgattttgtaccc 45829047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 5205987 - 5206042
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||||| ||||||||||||  ||||  |||||||||||||||    
T  5205987 aggcttaattgcacttttcctccctatcttttgttaatttggcgattttgcacccc 5206042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 271
Target Start/End: Complemental strand, 39415580 - 39415483
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttttgccccct 271  Q
    ||||||||| ||||||||| ||| ||||||||||| |||||||| |||||||| ||| |         |||||||||||||| |||||||||||||||||    
T  39415580 aaggcttaactgcactttttccctctatcttttgctaattgtgcaattttgcatccctt--tttttttgagcgattttgcactccatctttttgccccct 39415483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 39744029 - 39744084
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||||||||  ||| |||||||||||||||| ||||||    
T  39744029 aggcttaattgcactttttccccctatagtttaccaattgtgcgattttccacccc 39744084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 27304718 - 27304773
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||| |||||||||  |||||| ||| ||||||||||||||||||||||||    
T  27304718 ggcttaattgcccttttcccc--tatcttctgctaattgtgcgattttgcaccccctc 27304773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 43292411 - 43292361
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||||||||||| ||||||||||| |  |||||||||||||||||||||||    
T  43292411 ggcttaattgcatttttcccccctttagtttgccaattgtgcgattttgca 43292361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 5206283 - 5206231
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||||||||||||| ||||||||   ||||||||||||||||||||    
T  5206283 ggcttaattgcacttttcccccttatctttt-ttaattgtgcgattttgcaccc 5206231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 43292038 - 43292091
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||  |||||||  |||| ||||||||||||||||||||||    
T  43292038 gcttaattgcacttttttcccctatagtttgtcaattgtgcgattttgcacccc 43292091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 47219252 - 47219203
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    ||||||||| ||||| || ||||||||||| |||||||||||||||||||    
T  47219252 ttaattgcatttttcacctctatcttttgctaattgtgcgattttgcacc 47219203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 7603477 - 7603422
Alignment:
Q  169 acaaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcac 225  Q
    |||| ||||||||||||||||| |||| ||||||||  |||||||||||||||||||    
T  7603477 acaatggcttaattgcactttttcccc-tatctttttacaattgtgcgattttgcac 7603422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 16555743 - 16555695
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 226  Q
    ||||||||||||||||| |||||||| || |||||||||||||||||||    
T  16555743 aattgcacttttcccccttatctttttgctaattgtgcgattttgcacc 16555695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 48405960 - 48406015
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| ||||||||  |||||||||| ||| ||||||||||||    
T  48405960 aaggcttaattgcactttt-ccccctatagtttgccaattatgcaattttgcacccc 48406015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 227
Target Start/End: Complemental strand, 48406425 - 48406386
Alignment:
Q  188 tttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  48406425 tttcccccctataatttgccaattgtgcgattttgcaccc 48406386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 39415244 - 39415314
Alignment:
Q  194 ccctatcttttgccaattgtgcgattttgcaccccctc-nnnnnnnngagcgattttgcaccccatctttt 263  Q
    ||||||||||||| |||||||||||||||||||| |||         ||||||||||||||||||||||||    
T  39415244 ccctatcttttgctaattgtgcgattttgcaccctctctttttatttgagcgattttgcaccccatctttt 39415314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 3930179 - 3930235
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||| |||| ||||||||   |||| |||||||||||||||||||    
T  3930179 ggcttaattgcactttttcccc-tatcttttattaattatgcgattttgcaccccctc 3930235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 5206185 - 5206132
Alignment:
Q  179 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccctc 231  Q
    |||||||||| | ||||||||||||| || |||||||||||||||||| |||||    
T  5206185 aattgcacttcttccccctatctttttgctaattgtgcgattttgcactccctc 5206132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 7603146 - 7603200
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||  ||||||||   |||||||| |||||||||||||||    
T  7603146 gcttaattgcacttttcccc--tatctttttttaattgtgcaattttgcaccccctc 7603200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 8488185 - 8488242
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||| ||||   || |||||||||  |||||||||||||||||||||    
T  8488185 aaaggcttaattgcattttttttccatatcttttgttaattgtgcgattttgcacccc 8488242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 204
Target Start/End: Complemental strand, 21871356 - 21871315
Alignment:
Q  163 aattttacaaaggcttaattgcacttttcccccctatctttt 204  Q
    ||||||| ||||||||||||||||||||  ||||||||||||    
T  21871356 aattttaaaaaggcttaattgcacttttggcccctatctttt 21871315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 204
Target Start/End: Complemental strand, 21927217 - 21927176
Alignment:
Q  163 aattttacaaaggcttaattgcacttttcccccctatctttt 204  Q
    ||||||| ||||||||||||||||||||  ||||||||||||    
T  21927217 aattttaaaaaggcttaattgcacttttggcccctatctttt 21927176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 49178533 - 49178574
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgc 215  Q
    |||||||||||||||||| ||| |||||||||| ||||||||    
T  49178533 ggcttaattgcacttttctcccatatcttttgctaattgtgc 49178574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 276
Target Start/End: Complemental strand, 11241673 - 11241641
Alignment:
Q  244 gattttgcaccccatctttttgccccctctctg 276  Q
    |||||||||||||||||||||||||||| ||||    
T  11241673 gattttgcaccccatctttttgccccctttctg 11241641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 23432475 - 23432531
Alignment:
Q  173 aggcttaattgcacttttccccccta-tcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| ||||||| | ||||| ||||||||| ||| ||||||||    
T  23432475 aggcttaattgcacttttgccccctatttttttgtcaattgtgcaattctgcacccc 23432531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 227
Target Start/End: Complemental strand, 54509156 - 54509116
Alignment:
Q  187 ttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    |||| |||||||| |||||| ||||||||||||||||||||    
T  54509156 tttttccccctattttttgctaattgtgcgattttgcaccc 54509116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 54; Significance: 5e-22; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 438930 - 438987
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  438930 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 438987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 263
Target Start/End: Complemental strand, 439254 - 439165
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttt 263  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||||||||| ||||||        ||||||||||||||||||||||||    
T  439254 aggcttaattgcactttttccccttatcttttgctaattgtgcgattttgcatcccctc-tttttttgagcgattttgcaccccatctttt 439165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 183719 - 183660
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||    
T  183719 aaaggcttaattgcacttttcccccctatattttgctaattgtgcga-tttgcaccccctc 183660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 183367 - 183416
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    |||||||||||||||||| |||||||||| ||||||| |||||||||||||    
T  183367 ttaattgcacttttcccc-ctatcttttgtcaattgtacgattttgcaccc 183416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 183592 - 183544
Alignment:
Q  177 ttaattgcacttttcccccctatc-ttttgccaattgtgcgattttgca 224  Q
    |||||||||||||| ||||||||| |||| |||||||||||||||||||    
T  183592 ttaattgcacttttgccccctatctttttaccaattgtgcgattttgca 183544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 276
Target Start/End: Original strand, 411923 - 412024
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcnnnnnnnngagcgattttgcaccccatctttttgccccctct 273  Q
    |||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||         ||||||||||||||| ||||||||||||||| |    
T  411923 ggcttaattgcactttacccc-ctatcttttgtcaattgtgcgattttgcaccccctcttttttttaagcgattttgcaccctatctttttgcccccttt 412021  T
Q  274 ctg 276  Q
    |||    
T  412022 ctg 412024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 6849 - 6795
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  6849 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcacccc 6795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 6152 - 6206
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    |||||||||||||||||| || ||||||||||| |||||||||||||| ||||||    
T  6152 ggcttaattgcacttttcacctctatcttttgctaattgtgcgattttacacccc 6206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 10009 - 10062
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  10009 aaaggcttaattgcacttttgccccctatcttttgccaattgtacgattttgca 10062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 38751 - 38695
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||    
T  38751 aaggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcacccc 38695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 185328 - 185274
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| ||||||  |||||||||||||||||||||||||||    
T  185328 ggcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacccc 185274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 9903 - 9960
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 229  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||| |||||||    
T  9903 aaggcttaattgcactttttccccctatagtttgccaattgtgcgatttttcaccccc 9960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 328 - 380
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 224  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  328 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgca 380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 816 - 763
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||| |||| |||  |||||||||||||||||||||||||||    
T  816 ggcttaattgcactttttcccc-tatagtttgccaattgtgcgattttgcacccc 763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 205684 - 205743
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||||||    
T  205684 aaaggcttaattgcatttttctccc-tatcttttgctaattgtgcgattttgcaccccctc 205743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 229
Target Start/End: Complemental strand, 50560 - 50506
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccc 229  Q
    |||||||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  50560 ggcttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcaccccc 50506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 50073 - 50127
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||  ||||||||  |||| ||||||||| ||||||||||||    
T  50073 aaggcttaattgcacttt--ccccctatagtttgtcaattgtgcaattttgcacccc 50127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 7653 - 7597
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||| ||||||||    
T  7653 ggcttaattgcactttttcccc-tatcttttgctaattgtgcgattttgtaccccctc 7597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 7453 - 7508
Alignment:
Q  172 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||| |||| |||||||||| |||| ||||||||||||||||    
T  7453 aaggcttaattgcactttttcccc-tatcttttgctaattatgcgattttgcacccc 7508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 17209 - 17153
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||||||||||| |||||||||| |||||||| |||||||||| ||||    
T  17209 ggcttaattgcacttttccccc-tatcttttgctaattgtgcaattttgcaccgcctc 17153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 231
Target Start/End: Original strand, 16870 - 16908
Alignment:
Q  193 cccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  16870 cccctatcttttgctaattgtgcgattatgcaccccctc 16908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 6927 - 6877
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccc 227  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  6927 gcttaattgcacttt-cccccctatcttttgccaattgtgc-attttgcaccc 6877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 6609 - 6659
Alignment:
Q  176 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 226  Q
    |||||||||||| |||||||||||||||||  ||||||| |||||||||||    
T  6609 cttaattgcactgttcccccctatcttttgttaattgtgtgattttgcacc 6659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 20098 - 20043
Alignment:
Q  173 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||| ||||    
T  20098 aggcttaattgcacttttcccccttatagtttgtcaattgtgcgattttgcccccc 20043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 19618 - 19674
Alignment:
Q  171 aaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||| ||||||||  |||  |||||||||||||||||||||||||||    
T  19618 aaaggcttaattgcaattttcccca-tatagtttgccaattgtgcgattttgcacccc 19674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 1511 - 1564
Alignment:
Q  174 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacccc 228  Q
    ||||||||||||||||| || | |||||||||||||||||| |||||||||||||    
T  1511 ggcttaattgcactttttcctc-tatcttttgccaattgtgtgattttgcacccc 1564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 1834 - 1781
Alignment:
Q  177 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||||||||||| |||||||||   |||||||||||||||||| ||||    
T  1834 ttaattgcacttttccccc-tatcttttgtttattgtgcgattttgcacctcctc 1781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 72967 - 73023
Alignment:
Q  175 gcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc 231  Q
    ||||||||||| ||||||||  |||||||||| |||||||| |||||||||| ||||    
T  72967 gcttaattgcatttttcccctttatcttttgctaattgtgcaattttgcaccgcctc 73023  T

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Target: scaffold0035; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 73089 - 73143
Alignment:
Q  177 ttaattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccccct 230  Q
    ||||||||||||||  |||||||||||| | ||| ||||||||||||||||||||    
T  73089 ttaattgcacttttgtcccctatctttttgtcaactgtgcgattttgcaccccct 73143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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