View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0712_high_10 (Length: 361)
Name: NF0712_high_10
Description: NF0712
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0712_high_10 |
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Alignment Details
Target: chr3 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 50 - 355
Target Start/End: Original strand, 51209589 - 51209894
Alignment:
| Q |
50 |
cttctcttactgccagaatcaaaagttttacattggatacacctttggttaattctacaattggtgataataatgtgaaactaaatgcttcaaattcaaa |
149 |
Q |
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| T |
51209589 |
cttctcttactgccagaatcaaaagttttacattggatacacctttggttaattctacaattggtgataataatgtgaaactaaatgcttcaaattcaaa |
51209688 |
T |
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| Q |
150 |
ctctactaatccactacaaaatatagcaattagtcctcaagcctctttattagatcaagttacatattcagaaaagagtaaacaaattgaaactgttgtt |
249 |
Q |
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| T |
51209689 |
ctctactaatccattacaaaatatagcaattagtcctcaagcctcttcattagatcaagttacaaattcagaaaagagtaaacaaattgaaactgttgtt |
51209788 |
T |
|
| Q |
250 |
ggatttagaaatgatggttcgccaatgggtagtgttgatggaaaagatgttaatttaacatcacaagggaatcaatcttccttgcttgcaccacagccta |
349 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51209789 |
ggatttagaaatgatggttcaccaatgggtagtgttgatggaaaagatgttaatttaacatcacaagggaatcaatcttccttgcttgcaccacagccta |
51209888 |
T |
|
| Q |
350 |
tgatac |
355 |
Q |
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|||||| |
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| T |
51209889 |
tgatac |
51209894 |
T |
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