View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0712_low_21 (Length: 346)
Name: NF0712_low_21
Description: NF0712
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF0712_low_21 |
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[»] scaffold0189 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 139; Significance: 1e-72; HSPs: 9)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 167 - 317
Target Start/End: Complemental strand, 4641554 - 4641404
Alignment:
Q |
167 |
tgtctccctccccaacaaaccaagaagtttccttctagtttaaacatgtctatgccgatccacaacctctaatacttaccaagcaacaactttcagcttt |
266 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |
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|
T |
4641554 |
tgtctccctccccaacaaaccaagaagtttccttctagtttaaacatgtctatgccgatccacaacctctgatacttaccaagcaacaactttcagattt |
4641455 |
T |
 |
Q |
267 |
catttaattaatcacaaattcatagaaatcaaatattaaaaataacacaag |
317 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
T |
4641454 |
catttaattaatcacaaatccatagaaatcaaatattaaaaataacacaag |
4641404 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 4641801 - 4641667
Alignment:
Q |
8 |
tagcataggaaagaggaattgtttcccaccatgggaaagtaattttcaaccattgaatcaaatagataacatagttttatcatatacattcaacacctaa |
107 |
Q |
|
|
|||||| |||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||| | ||||||| ||||| |
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|
T |
4641801 |
tagcatgggaaaggggaattgtttcccaccaagggaaagtaattttcaaccattggatcaaatagagaacatagttttatcatagaaattcaactcctaa |
4641702 |
T |
 |
Q |
108 |
nnnnnnnctcacactcacccacatacaactgctgc |
142 |
Q |
|
|
|||||||||||||||||||||||||||| |
|
|
T |
4641701 |
ttttcttctcacactcacccacatacaactgctgc |
4641667 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 4640537 - 4640603
Alignment:
Q |
8 |
tagcataggaaagaggaattgtttcccaccatgggaaagtaattttcaaccattgaatcaaatagat |
74 |
Q |
|
|
|||||| | |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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|
T |
4640537 |
tagcatggtaaaggggaattgtttcccaccatgggaaagtaattttcaaccattagatcaaatagat |
4640603 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 31389087 - 31389165
Alignment:
Q |
26 |
ttgtttcccaccatgggaaagtaattttcaaccattgaatcaaatagataacatagttttatcatatacattcaacacc |
104 |
Q |
|
|
|||||||||| ||||||||||| ||||| ||| |||| || ||||||| ||||||||||||| || |||||||||||| |
|
|
T |
31389087 |
ttgtttcccatcatgggaaagtcatttttaacgattggattaaatagagaacatagttttattatggacattcaacacc |
31389165 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 104
Target Start/End: Complemental strand, 31788297 - 31788219
Alignment:
Q |
26 |
ttgtttcccaccatgggaaagtaattttcaaccattgaatcaaatagataacatagttttatcatatacattcaacacc |
104 |
Q |
|
|
|||||||||||||||||||||| | ||| ||||||| || ||||||| |||||| ||||| |||| ||| |||||||| |
|
|
T |
31788297 |
ttgtttcccaccatgggaaagttaattttaaccattagataaaatagagaacatacttttaccatagacactcaacacc |
31788219 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 14924701 - 14924779
Alignment:
Q |
26 |
ttgtttcccaccatgggaaag-taattttcaaccattgaatcaaatagataacatagttttatcatatacattcaacacc |
104 |
Q |
|
|
||||||||||||||||||||| ||||||| ||| || ||| ||||||| |||||| |||||||||| ||| |||||||| |
|
|
T |
14924701 |
ttgtttcccaccatgggaaagctaatttt-gaccgttaaattaaatagagaacatatttttatcatagacactcaacacc |
14924779 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 29334241 - 29334307
Alignment:
Q |
26 |
ttgtttcccaccatgggaaagtaattttcaaccattgaatcaaatagataacatagttttatcatat |
92 |
Q |
|
|
|||||||||||||||||||||||| ||| | ||||| |||||||| | | |||| ||||||||||| |
|
|
T |
29334241 |
ttgtttcccaccatgggaaagtaaattttacccattagatcaaataaagaccatacttttatcatat |
29334307 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 38931331 - 38931376
Alignment:
Q |
16 |
gaaagaggaattgtttcccaccatgggaaagtaattttcaaccatt |
61 |
Q |
|
|
||||| |||||||||||||||||||||||||| | ||| ||||||| |
|
|
T |
38931331 |
gaaaggggaattgtttcccaccatgggaaagtcaatttgaaccatt |
38931376 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 27418186 - 27418234
Alignment:
Q |
22 |
ggaattgtttcccaccatgggaaagtaattttcaaccattgaatcaaat |
70 |
Q |
|
|
||||||||||||||||||| ||||||||||| ||||||| ||||||| |
|
|
T |
27418186 |
ggaattgtttcccaccatgaaaaagtaatttttaaccattagatcaaat |
27418234 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 34034192 - 34034259
Alignment:
Q |
23 |
gaattgtttcccaccatgggaaagtaattttcaaccattgaatcaaatagataacatagttttatcat |
90 |
Q |
|
|
|||||| |||||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||| |
|
|
T |
34034192 |
gaattgcttcccaccatgggaaagttattttaaaccattggatcaaatagagaacatagttttatcat |
34034259 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 34035068 - 34035005
Alignment:
Q |
23 |
gaattgtttcccaccatgggaaagtaattttcaaccattgaatcaaatagataacatagtttta |
86 |
Q |
|
|
||||||||||||| ||||||||||| ||||| |||||||| |||||||||| |||||||||||| |
|
|
T |
34035068 |
gaattgtttcccatcatgggaaagttattttaaaccattggatcaaatagagaacatagtttta |
34035005 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 24125988 - 24126034
Alignment:
Q |
15 |
ggaaagaggaattgtttcccaccatgggaaagtaattttcaaccatt |
61 |
Q |
|
|
|||||| ||| |||||||||||||||||||||| ||||||| ||||| |
|
|
T |
24125988 |
ggaaaggggagttgtttcccaccatgggaaagttattttcagccatt |
24126034 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 44; Significance: 5e-16; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 22499122 - 22499185
Alignment:
Q |
23 |
gaattgtttcccaccatgggaaagtaattttcaaccattgaatcaaatagataacatagtttta |
86 |
Q |
|
|
||||||||| ||| ||||||||||| ||||| |||||||| ||||||||||||||||||||||| |
|
|
T |
22499122 |
gaattgttttccatcatgggaaagttattttaaaccattggatcaaatagataacatagtttta |
22499185 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 22499998 - 22499931
Alignment:
Q |
23 |
gaattgtttcccaccatgggaaagtaattttcaaccattgaatcaaatagataacatagttttatcat |
90 |
Q |
|
|
||||||||| ||||||| ||||||| ||||| |||||||| |||||||||| |||||||||||||||| |
|
|
T |
22499998 |
gaattgttttccaccataggaaagttattttaaaccattggatcaaatagagaacatagttttatcat |
22499931 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 53664234 - 53664315
Alignment:
Q |
21 |
aggaattgtttcccaccatgggaaagtaattttcaaccattgaatcaaatagataacatagttttatcatatacattcaaca |
102 |
Q |
|
|
||||||| ||||||||||||||||||||| | | |||||| || ||||||| ||||| ||||||||||| ||| |||||| |
|
|
T |
53664234 |
aggaattctttcccaccatgggaaagtaaatattgaccattagataaaatagagaacatggttttatcatagacactcaaca |
53664315 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 61
Target Start/End: Original strand, 34154821 - 34154856
Alignment:
Q |
26 |
ttgtttcccaccatgggaaagtaattttcaaccatt |
61 |
Q |
|
|
||||||||||||||||||||||| |||||||||||| |
|
|
T |
34154821 |
ttgtttcccaccatgggaaagtatttttcaaccatt |
34154856 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 47377630 - 47377584
Alignment:
Q |
15 |
ggaaagaggaattgtttcccaccatgggaaagtaattttcaaccatt |
61 |
Q |
|
|
|||||| ||| |||||||||||||||||||||| ||||||| ||||| |
|
|
T |
47377630 |
ggaaaggggagttgtttcccaccatgggaaagttattttcagccatt |
47377584 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 47
Target Start/End: Original strand, 34371478 - 34371510
Alignment:
Q |
15 |
ggaaagaggaattgtttcccaccatgggaaagt |
47 |
Q |
|
|
|||||| |||||||||||||||||||||||||| |
|
|
T |
34371478 |
ggaaaggggaattgtttcccaccatgggaaagt |
34371510 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 33802399 - 33802318
Alignment:
Q |
21 |
aggaattgtttcccaccatgggaaagtaattttcaaccattgaatcaaatagataacatagttttatcatatacattcaaca |
102 |
Q |
|
|
||||||| ||||||||||||||||||||| | | |||||| ||| ||||||| ||||| ||||||||||| ||| |||||| |
|
|
T |
33802399 |
aggaattctttcccaccatgggaaagtaaatattgaccattaaataaaatagagaacatggttttatcatagacactcaaca |
33802318 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 33801521 - 33801604
Alignment:
Q |
21 |
aggaattgtttcccaccatgggaaagtaattttcaaccattgaatcaaatagataacatagttttatcatatacattcaacacc |
104 |
Q |
|
|
||||||| ||||||||||||| ||||||| | | |||||| ||| || |||| ||||| ||||||||||| ||| |||||||| |
|
|
T |
33801521 |
aggaattctttcccaccatggaaaagtaaatattgaccattaaataaagtagagaacatggttttatcatagacactcaacacc |
33801604 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 104
Target Start/End: Complemental strand, 43972107 - 43972029
Alignment:
Q |
26 |
ttgtttcccaccatgggaaagtaattttcaaccattgaatcaaatagataacatagttttatcatatacattcaacacc |
104 |
Q |
|
|
||||||||||| |||||||||| | ||| ||||||| || ||||||| |||||| ||||| |||| ||| |||||||| |
|
|
T |
43972107 |
ttgtttcccactatgggaaagttaattttaaccattagataaaatagagaacatacttttaccatagacactcaacacc |
43972029 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 40451007 - 40450963
Alignment:
Q |
26 |
ttgtttcccaccatgggaaagtaattttcaaccattgaatcaaat |
70 |
Q |
|
|
|||||||||||||||||||||||| ||| ||||||| ||||||| |
|
|
T |
40451007 |
ttgtttcccaccatgggaaagtaaattttaaccattagatcaaat |
40450963 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 34; Significance: 0.0000000005; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 38780088 - 38780007
Alignment:
Q |
23 |
gaattgtttcccaccatgggaaagtaattttcaaccattgaatcaaatagataacatagttttatcatatacattcaacacc |
104 |
Q |
|
|
|||||| || ||| ||||||||||| ||||| || |||| |||||||||| |||||||||||||||| ||||||| |||| |
|
|
T |
38780088 |
gaattgctttccatcatgggaaagttattttaaattattggatcaaatagagaacatagttttatcatggacattcagcacc |
38780007 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 104
Target Start/End: Complemental strand, 4976526 - 4976448
Alignment:
Q |
26 |
ttgtttcccaccatgggaaagtaattttcaaccattgaatcaaatagataacatagttttatcatatacattcaacacc |
104 |
Q |
|
|
||||||||||| |||||||||| | ||| ||||||| || ||||||| |||||| ||||| |||| ||| |||||||| |
|
|
T |
4976526 |
ttgtttcccactatgggaaagttaattttaaccattagataaaatagagaacatacttttaccatagacactcaacacc |
4976448 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 104
Target Start/End: Complemental strand, 4994433 - 4994355
Alignment:
Q |
26 |
ttgtttcccaccatgggaaagtaattttcaaccattgaatcaaatagataacatagttttatcatatacattcaacacc |
104 |
Q |
|
|
||||||||||| |||||||||| | ||| ||||||| || ||||||| |||||| ||||| |||| ||| |||||||| |
|
|
T |
4994433 |
ttgtttcccactatgggaaagttaattttaaccattagataaaatagagaacatacttttaccatagacactcaacacc |
4994355 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 36390966 - 36391028
Alignment:
Q |
8 |
tagcataggaaagaggaattgtttcccaccatgggaaagtaattttcaaccattgaatcaaat |
70 |
Q |
|
|
|||||| |||||| | | |||||||||||||||||||||||| ||| ||||||| ||||||| |
|
|
T |
36390966 |
tagcatgggaaagggaagttgtttcccaccatgggaaagtaaattttaaccattagatcaaat |
36391028 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 32; Significance: 0.000000008; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 47
Target Start/End: Complemental strand, 29060778 - 29060739
Alignment:
Q |
8 |
tagcataggaaagaggaattgtttcccaccatgggaaagt |
47 |
Q |
|
|
|||||| |||||| |||||||||||||||||||||||||| |
|
|
T |
29060778 |
tagcatgggaaaggggaattgtttcccaccatgggaaagt |
29060739 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 47
Target Start/End: Original strand, 42607090 - 42607129
Alignment:
Q |
8 |
tagcataggaaagaggaattgtttcccaccatgggaaagt |
47 |
Q |
|
|
|||||| |||||| |||||||||||||||||||||||||| |
|
|
T |
42607090 |
tagcatgggaaaggggaattgtttcccaccatgggaaagt |
42607129 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 24996722 - 24996677
Alignment:
Q |
8 |
tagcataggaaagaggaattgtttcccaccatgggaaagtaatttt |
53 |
Q |
|
|
|||||| |||||| ||| ||||||||||||||||||||||| |||| |
|
|
T |
24996722 |
tagcatgggaaaggggagttgtttcccaccatgggaaagtattttt |
24996677 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 44541747 - 44541702
Alignment:
Q |
8 |
tagcataggaaagaggaattgtttcccaccatgggaaagtaatttt |
53 |
Q |
|
|
|||||| |||||| |||||||||||| |||||||||||||| |||| |
|
|
T |
44541747 |
tagcatgggaaagtggaattgtttccgaccatgggaaagtattttt |
44541702 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 32; Significance: 0.000000008; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 45501326 - 45501271
Alignment:
Q |
15 |
ggaaagaggaattgtttcccaccatgggaaagtaattttcaaccattgaatcaaat |
70 |
Q |
|
|
|||||| ||| |||||| ||||||||||||||||| ||| |||||||| ||||||| |
|
|
T |
45501326 |
ggaaaggggagttgttttccaccatgggaaagtaaatttaaaccattggatcaaat |
45501271 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 47
Target Start/End: Complemental strand, 49161847 - 49161808
Alignment:
Q |
8 |
tagcataggaaagaggaattgtttcccaccatgggaaagt |
47 |
Q |
|
|
|||||| |||||| |||||||||||||||||||||||||| |
|
|
T |
49161847 |
tagcatgggaaaggggaattgtttcccaccatgggaaagt |
49161808 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 51421706 - 51421656
Alignment:
Q |
16 |
gaaagaggaattgtttcccaccatgggaaagtaattttcaaccattgaatc |
66 |
Q |
|
|
||||| |||||||||||||||||||||||||| | ||| ||||||| |||| |
|
|
T |
51421706 |
gaaaggggaattgtttcccaccatgggaaagtcaatttgaaccattaaatc |
51421656 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0189 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0189
Description:
Target: scaffold0189; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 104
Target Start/End: Complemental strand, 12880 - 12802
Alignment:
Q |
26 |
ttgtttcccaccatgggaaagtaattttcaaccattgaatcaaatagataacatagttttatcatatacattcaacacc |
104 |
Q |
|
|
|||||||||||||||||||||| | ||| |||||| || || |||| |||||| |||||||||| ||| |||||||| |
|
|
T |
12880 |
ttgtttcccaccatgggaaagttaattttgaccattagataaactagagaacatacttttatcatagacactcaacacc |
12802 |
T |
 |
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Target: chr5 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 6804900 - 6804945
Alignment:
Q |
8 |
tagcataggaaagaggaattgtttcccaccatgggaaagtaatttt |
53 |
Q |
|
|
|||||| |||||||||| |||||||||||||||| |||||| |||| |
|
|
T |
6804900 |
tagcatgggaaagaggagttgtttcccaccatggaaaagtactttt |
6804945 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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