View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0713-Insertion-2 (Length: 471)
Name: NF0713-Insertion-2
Description: NF0713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0713-Insertion-2 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 341; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 87 - 471
Target Start/End: Complemental strand, 31786329 - 31785942
Alignment:
| Q |
87 |
catgaacaaaagtaaataagatctatatttccaagtatattaggcacacttagaaaaatatgagtataaa--atgaaaaattatcactagaa-gatcaaa |
183 |
Q |
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| T |
31786329 |
catgaacaaaagtaaataagatctatcttttcaagtatattaaacccacttacaaaaatatgagtataaattatgaaaaattatcactagaatgatcaaa |
31786230 |
T |
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| Q |
184 |
attacaaaatttagtgttattctaatgatttaaaagtggcaatttgttgtgtattgaactctatggttgagggcaggcatttctctctttgtttctatca |
283 |
Q |
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| T |
31786229 |
attacaaaatttagtgttattctaatgatttaaaagtggcaatttgttgtgtattgaactctatgattgagggcaggcatttctctctttgtttctatca |
31786130 |
T |
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| Q |
284 |
atccaaacatatttctttcaattggcttttgggggctagtgcttggtttctgttcttctatattttcagcattgttttcactcaaatcttgtatgtccaa |
383 |
Q |
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| T |
31786129 |
atccaaacatatttctttcaattggcttttgggggctagtgcttggtttctgttcttctatattttcagcattgttttcactcaaatcttgtatgtccaa |
31786030 |
T |
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| Q |
384 |
tatctcaactcttcgatttgttttcttttttatcttgattgcaacatcttgagggatgaaactgccacacacaattaccctggtttgc |
471 |
Q |
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| T |
31786029 |
tatctcaactcttcgatttgttttcttttttatcttgattgcaacatcttgagggatgaaactgccacacacaattaccctggtttgc |
31785942 |
T |
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