View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0713_high_24 (Length: 239)
Name: NF0713_high_24
Description: NF0713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0713_high_24 |
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Alignment Details
Target: chr7 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 43007077 - 43006939
Alignment:
| Q |
1 |
ttcccttttcatataaccccttttcctttcctgaaacctagaaaacccaaaagcatcatcatattgatttgatgacctccattcttcttctcagaactct |
100 |
Q |
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| T |
43007077 |
ttcccttttcatagaacccattttccttccctgaaacctagaaaacccaaaagcatcatcatattgatttgatgacctccattcttcttctcataactct |
43006978 |
T |
|
| Q |
101 |
tctnnnnnnnncagattaaaattaagggttttttggctttg |
141 |
Q |
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| T |
43006977 |
cct--aaaaaacagattaaaattaagggttttttggctttg |
43006939 |
T |
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