View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0713_low_1 (Length: 941)

Name: NF0713_low_1
Description: NF0713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0713_low_1
NF0713_low_1
[»] chr3 (71 HSPs)
chr3 (498-914)||(17936907-17937323)
chr3 (141-403)||(17936907-17937169)
chr3 (485-810)||(11987344-11987667)
chr3 (128-355)||(11987440-11987667)
chr3 (141-357)||(14283970-14284187)
chr3 (498-714)||(14283970-14284187)
chr3 (128-355)||(38166710-38166936)
chr3 (485-712)||(38166710-38166936)
chr3 (128-297)||(11480411-11480580)
chr3 (485-654)||(11480411-11480580)
chr3 (129-355)||(12903132-12903355)
chr3 (486-712)||(12903132-12903355)
chr3 (669-824)||(18738690-18738844)
chr3 (673-805)||(54039725-54039857)
chr3 (673-824)||(51962326-51962477)
chr3 (669-824)||(23174560-23174716)
chr3 (669-796)||(18892840-18892967)
chr3 (173-254)||(9304100-9304181)
chr3 (129-258)||(18738472-18738601)
chr3 (486-615)||(18738472-18738601)
chr3 (531-611)||(9304100-9304180)
chr3 (673-796)||(18889617-18889741)
chr3 (603-712)||(11480311-11480418)
chr3 (246-355)||(11480311-11480418)
chr3 (817-913)||(9591926-9592024)
chr3 (817-909)||(33370040-33370134)
chr3 (486-547)||(9304049-9304110)
chr3 (129-190)||(9304049-9304110)
chr3 (817-913)||(47983791-47983887)
chr3 (817-913)||(47993078-47993174)
chr3 (817-913)||(48002365-48002461)
chr3 (817-913)||(48011651-48011747)
chr3 (542-615)||(51962590-51962663)
chr3 (185-258)||(51962590-51962663)
chr3 (316-403)||(54039770-54039857)
chr3 (312-390)||(18892840-18892918)
chr3 (838-900)||(41660530-41660593)
chr3 (316-403)||(51962390-51962477)
chr3 (145-242)||(54040053-54040151)
chr3 (145-242)||(54049340-54049438)
chr3 (796-906)||(17957525-17957633)
chr3 (312-377)||(23174560-23174625)
chr3 (797-913)||(16819767-16819880)
chr3 (316-376)||(18889617-18889677)
chr3 (669-712)||(9303670-9303713)
chr3 (312-355)||(9303670-9303713)
chr3 (797-912)||(33340704-33340817)
chr3 (817-913)||(34558780-34558876)
chr3 (832-901)||(14284190-14284258)
chr3 (616-715)||(9303952-9304051)
chr3 (259-358)||(9303952-9304051)
chr3 (843-914)||(16259946-16260017)
chr3 (797-912)||(2450513-2450626)
chr3 (843-912)||(7852713-7852782)
chr3 (797-912)||(18909548-18909661)
chr3 (797-912)||(22273903-22274016)
chr3 (797-912)||(53769519-53769632)
chr3 (542-599)||(54040053-54040111)
chr3 (542-599)||(54049340-54049398)
chr3 (817-895)||(12951932-12952011)
chr3 (859-914)||(13327734-13327790)
chr3 (841-900)||(48420582-48420641)
chr3 (185-224)||(10903074-10903113)
chr3 (542-581)||(10903074-10903113)
chr3 (823-901)||(15549428-15549505)
chr3 (817-906)||(16745361-16745451)
chr3 (312-403)||(18738690-18738780)
chr3 (748-806)||(8603655-8603713)
chr3 (797-901)||(51159674-51159775)
chr3 (866-914)||(14079522-14079570)
chr3 (822-913)||(39654797-39654889)
[»] chr7 (40 HSPs)
chr7 (485-824)||(13319959-13320298)
chr7 (128-355)||(13319959-13320187)
chr7 (128-355)||(3048391-3048617)
chr7 (485-712)||(3048391-3048617)
chr7 (669-824)||(47482061-47482216)
chr7 (486-649)||(47482272-47482433)
chr7 (129-292)||(47482272-47482433)
chr7 (486-701)||(48623663-48623875)
chr7 (129-344)||(48623663-48623875)
chr7 (669-810)||(15761333-15761473)
chr7 (669-833)||(7285580-7285743)
chr7 (146-242)||(7285936-7286032)
chr7 (312-403)||(47482125-47482216)
chr7 (542-599)||(7285936-7285993)
chr7 (502-599)||(14252809-14252907)
chr7 (145-242)||(14252809-14252907)
chr7 (312-403)||(7285652-7285743)
chr7 (312-403)||(15761382-15761473)
chr7 (797-913)||(15952282-15952396)
chr7 (817-913)||(9057825-9057921)
chr7 (817-906)||(13912306-13912396)
chr7 (817-913)||(48354254-48354350)
chr7 (669-714)||(14252568-14252613)
chr7 (312-357)||(14252568-14252613)
chr7 (843-914)||(2191881-2191952)
chr7 (838-913)||(9322217-9322293)
chr7 (797-913)||(16480122-16480236)
chr7 (832-898)||(3048622-3048687)
chr7 (817-901)||(11515002-11515087)
chr7 (797-912)||(16417328-16417441)
chr7 (840-913)||(20584056-20584129)
chr7 (817-912)||(2027438-2027534)
chr7 (832-912)||(14252486-14252565)
chr7 (735-806)||(14276135-14276205)
chr7 (817-898)||(15442760-15442842)
chr7 (817-898)||(30263325-30263407)
chr7 (797-912)||(7291717-7291830)
chr7 (797-901)||(11515093-11515193)
chr7 (185-223)||(12246624-12246662)
chr7 (542-580)||(12246624-12246662)
[»] scaffold0342 (2 HSPs)
scaffold0342 (485-824)||(1835-2171)
scaffold0342 (128-355)||(1946-2171)
[»] chr6 (51 HSPs)
chr6 (485-810)||(29664878-29665202)
chr6 (128-355)||(29664878-29665105)
chr6 (485-712)||(32277893-32278119)
chr6 (128-355)||(32277893-32278119)
chr6 (602-833)||(16301154-16301385)
chr6 (669-824)||(35010436-35010591)
chr6 (669-819)||(27739899-27740049)
chr6 (669-824)||(14627172-14627327)
chr6 (669-824)||(222009-222165)
chr6 (671-824)||(14151366-14151519)
chr6 (669-810)||(1554902-1555042)
chr6 (185-355)||(19628056-19628224)
chr6 (542-712)||(19628056-19628224)
chr6 (245-403)||(16301225-16301385)
chr6 (185-258)||(27739744-27739817)
chr6 (542-615)||(27739744-27739817)
chr6 (489-654)||(16301421-16301583)
chr6 (132-297)||(16301421-16301583)
chr6 (817-913)||(22847027-22847125)
chr6 (145-245)||(35010780-35010881)
chr6 (817-914)||(35137175-35137272)
chr6 (312-390)||(14627249-14627327)
chr6 (312-390)||(27739899-27739977)
chr6 (312-390)||(35010513-35010591)
chr6 (602-655)||(16301376-16301429)
chr6 (245-298)||(16301376-16301429)
chr6 (817-895)||(16888945-16889024)
chr6 (312-391)||(222009-222088)
chr6 (185-254)||(14151202-14151272)
chr6 (542-611)||(14151202-14151272)
chr6 (832-914)||(32277807-32277888)
chr6 (542-602)||(35010780-35010841)
chr6 (312-403)||(1554902-1554993)
chr6 (797-913)||(14627793-14627907)
chr6 (797-901)||(18824956-18825058)
chr6 (843-913)||(34965854-34965925)
chr6 (822-901)||(4989784-4989864)
chr6 (817-912)||(13622297-13622393)
chr6 (843-913)||(15736364-15736434)
chr6 (797-913)||(18004156-18004270)
chr6 (843-913)||(19853122-19853192)
chr6 (735-806)||(22594509-22594579)
chr6 (817-894)||(33323659-33323737)
chr6 (797-912)||(16230447-16230560)
chr6 (798-901)||(18843016-18843117)
chr6 (797-912)||(25174419-25174532)
chr6 (822-891)||(25918580-25918648)
chr6 (797-901)||(27655282-27655384)
chr6 (817-906)||(33315772-33315862)
chr6 (145-242)||(19627927-19628025)
chr6 (822-898)||(23976456-23976533)
[»] scaffold0207 (3 HSPs)
scaffold0207 (141-357)||(16611-16827)
scaffold0207 (498-714)||(16611-16827)
scaffold0207 (832-914)||(16830-16911)
[»] scaffold0118 (3 HSPs)
scaffold0118 (485-712)||(35521-35748)
scaffold0118 (128-355)||(35521-35748)
scaffold0118 (832-914)||(35435-35516)
[»] chr4 (80 HSPs)
chr4 (498-714)||(14502868-14503084)
chr4 (141-357)||(14502868-14503084)
chr4 (513-810)||(23271333-23271628)
chr4 (485-712)||(32461807-32462034)
chr4 (128-355)||(32461807-32462034)
chr4 (128-355)||(9793988-9794229)
chr4 (485-712)||(9793988-9794229)
chr4 (156-353)||(23271432-23271628)
chr4 (150-250)||(8043708-8043808)
chr4 (507-607)||(8043708-8043808)
chr4 (669-821)||(14910986-14911138)
chr4 (669-816)||(55377864-55378011)
chr4 (602-712)||(19698737-19698845)
chr4 (245-355)||(19698737-19698845)
chr4 (602-712)||(19709322-19709430)
chr4 (245-355)||(19709322-19709430)
chr4 (817-913)||(15014453-15014551)
chr4 (498-615)||(22737247-22737364)
chr4 (259-324)||(8043861-8043926)
chr4 (616-681)||(8043861-8043926)
chr4 (826-914)||(7187098-7187188)
chr4 (141-258)||(22737247-22737364)
chr4 (129-190)||(8043802-8043863)
chr4 (486-547)||(8043802-8043863)
chr4 (602-654)||(19698892-19698944)
chr4 (245-297)||(19698892-19698944)
chr4 (602-654)||(19709477-19709529)
chr4 (245-297)||(19709477-19709529)
chr4 (503-599)||(55378242-55378338)
chr4 (146-242)||(55378242-55378338)
chr4 (757-820)||(7849123-7849186)
chr4 (312-403)||(55377920-55378011)
chr4 (185-250)||(14570043-14570109)
chr4 (542-607)||(14570043-14570109)
chr4 (542-654)||(19698936-19699048)
chr4 (185-297)||(19698936-19699048)
chr4 (542-654)||(19709521-19709633)
chr4 (185-297)||(19709521-19709633)
chr4 (822-913)||(10238610-10238702)
chr4 (797-901)||(8373214-8373316)
chr4 (832-914)||(14502784-14502865)
chr4 (502-599)||(19699079-19699177)
chr4 (145-242)||(19699079-19699177)
chr4 (502-599)||(19709664-19709762)
chr4 (145-242)||(19709664-19709762)
chr4 (797-906)||(22355755-22355861)
chr4 (841-913)||(34197357-34197429)
chr4 (797-913)||(7133633-7133746)
chr4 (312-356)||(8043974-8044018)
chr4 (669-713)||(8043974-8044018)
chr4 (797-913)||(18167651-18167764)
chr4 (797-912)||(14950879-14950991)
chr4 (797-901)||(15212203-15212305)
chr4 (817-906)||(26678911-26679001)
chr4 (822-912)||(34394080-34394170)
chr4 (798-901)||(9294385-9294486)
chr4 (312-390)||(14910986-14911064)
chr4 (797-912)||(15273944-15274057)
chr4 (832-914)||(32461721-32461802)
chr4 (817-913)||(41257536-41257634)
chr4 (832-901)||(9794234-9794302)
chr4 (817-913)||(14900369-14900465)
chr4 (847-914)||(18110035-18110102)
chr4 (838-913)||(50221117-50221193)
chr4 (817-898)||(10487547-10487629)
chr4 (817-898)||(16329122-16329204)
chr4 (735-806)||(41917931-41918001)
chr4 (797-901)||(8373322-8373422)
chr4 (312-358)||(8373496-8373542)
chr4 (669-715)||(8373496-8373542)
chr4 (797-912)||(18247047-18247160)
chr4 (817-913)||(18275729-18275825)
chr4 (312-358)||(19019455-19019501)
chr4 (669-715)||(19019455-19019501)
chr4 (541-617)||(19082412-19082490)
chr4 (184-260)||(19082412-19082490)
chr4 (822-898)||(19999408-19999485)
chr4 (797-906)||(15288199-15288307)
chr4 (832-901)||(19698664-19698732)
chr4 (832-901)||(19709249-19709317)
[»] chr8 (64 HSPs)
chr8 (485-712)||(21495581-21495809)
chr8 (128-355)||(21495581-21495809)
chr8 (485-654)||(16040966-16041135)
chr8 (128-297)||(16040966-16041135)
chr8 (485-654)||(16042642-16042811)
chr8 (128-297)||(16042642-16042811)
chr8 (128-297)||(22885125-22885294)
chr8 (485-654)||(22885125-22885294)
chr8 (245-355)||(18611189-18611297)
chr8 (602-712)||(18611189-18611297)
chr8 (669-810)||(18618205-18618345)
chr8 (640-712)||(16040850-16040922)
chr8 (283-355)||(16040850-16040922)
chr8 (640-712)||(16042526-16042598)
chr8 (283-355)||(16042526-16042598)
chr8 (246-354)||(22885331-22885438)
chr8 (603-711)||(22885331-22885438)
chr8 (817-914)||(23148784-23148882)
chr8 (669-772)||(41508235-41508336)
chr8 (817-914)||(33612242-33612341)
chr8 (312-389)||(41508259-41508336)
chr8 (185-355)||(18617780-18617962)
chr8 (542-712)||(18617780-18617962)
chr8 (145-242)||(41508567-41508665)
chr8 (245-297)||(18611090-18611142)
chr8 (602-654)||(18611090-18611142)
chr8 (817-901)||(37654831-37654917)
chr8 (185-297)||(18610986-18611098)
chr8 (542-654)||(18610986-18611098)
chr8 (797-900)||(24718613-24718713)
chr8 (826-914)||(22885438-22885525)
chr8 (797-901)||(24107781-24107883)
chr8 (832-914)||(16040764-16040845)
chr8 (145-242)||(18610857-18610955)
chr8 (502-599)||(18610857-18610955)
chr8 (542-599)||(41508567-41508625)
chr8 (246-295)||(22885287-22885336)
chr8 (603-652)||(22885287-22885336)
chr8 (798-912)||(16040544-16040655)
chr8 (838-913)||(33171197-33171273)
chr8 (797-901)||(17151450-17151552)
chr8 (822-913)||(17284159-17284247)
chr8 (797-912)||(24930298-24930410)
chr8 (797-912)||(6775415-6775528)
chr8 (832-914)||(16042440-16042521)
chr8 (312-358)||(18618205-18618251)
chr8 (832-914)||(21495495-21495576)
chr8 (832-893)||(18617967-18618027)
chr8 (797-901)||(13722367-13722468)
chr8 (797-901)||(13722515-13722616)
chr8 (797-901)||(13722663-13722764)
chr8 (797-901)||(13722811-13722912)
chr8 (797-901)||(13722959-13723060)
chr8 (817-898)||(5237072-5237154)
chr8 (735-806)||(17500949-17501019)
chr8 (817-914)||(23227197-23227296)
chr8 (817-898)||(24662444-24662526)
chr8 (797-901)||(28836454-28836556)
chr8 (817-898)||(43684531-43684613)
chr8 (817-913)||(15932236-15932332)
chr8 (185-242)||(18617691-18617749)
chr8 (542-599)||(18617691-18617749)
chr8 (843-913)||(26010374-26010442)
chr8 (832-901)||(18611302-18611370)
[»] scaffold0066 (7 HSPs)
scaffold0066 (128-297)||(44727-44896)
scaffold0066 (128-297)||(52923-53092)
scaffold0066 (485-654)||(44727-44896)
scaffold0066 (485-654)||(52923-53092)
scaffold0066 (669-803)||(53346-53479)
scaffold0066 (245-298)||(53084-53137)
scaffold0066 (602-655)||(53084-53137)
[»] scaffold0032 (4 HSPs)
scaffold0032 (485-712)||(14705-14946)
scaffold0032 (128-355)||(14705-14946)
scaffold0032 (832-901)||(14632-14700)
scaffold0032 (830-878)||(105819-105868)
[»] chr2 (51 HSPs)
chr2 (538-712)||(25266505-25266679)
chr2 (181-355)||(25266505-25266679)
chr2 (497-712)||(28032372-28032586)
chr2 (140-355)||(28032372-28032586)
chr2 (485-712)||(23779185-23779424)
chr2 (128-355)||(23779185-23779424)
chr2 (129-355)||(17203229-17203453)
chr2 (486-712)||(17203229-17203453)
chr2 (669-824)||(32464832-32464987)
chr2 (242-354)||(22255294-22255406)
chr2 (599-711)||(22255294-22255406)
chr2 (185-363)||(22255130-22255309)
chr2 (542-720)||(22255130-22255309)
chr2 (612-712)||(7513256-7513355)
chr2 (255-355)||(7513256-7513355)
chr2 (817-914)||(19658840-19658938)
chr2 (146-242)||(32464580-32464675)
chr2 (822-895)||(19670338-19670412)
chr2 (129-242)||(22254985-22255099)
chr2 (763-824)||(7512982-7513043)
chr2 (542-599)||(32464618-32464675)
chr2 (817-914)||(19665557-19665655)
chr2 (797-912)||(21140735-21140848)
chr2 (797-901)||(34823058-34823160)
chr2 (145-242)||(7513522-7513620)
chr2 (797-912)||(21275711-21275824)
chr2 (486-599)||(22254985-22255099)
chr2 (797-913)||(25600823-25600936)
chr2 (542-599)||(42179877-42179935)
chr2 (185-242)||(42179877-42179935)
chr2 (797-883)||(12726913-12726996)
chr2 (832-898)||(7513186-7513251)
chr2 (542-599)||(7513522-7513580)
chr2 (797-912)||(12643209-12643322)
chr2 (798-901)||(24827764-24827865)
chr2 (841-913)||(66468-66540)
chr2 (542-654)||(7513379-7513491)
chr2 (185-297)||(7513379-7513491)
chr2 (817-901)||(15632274-15632359)
chr2 (669-714)||(42179632-42179677)
chr2 (312-357)||(42179632-42179677)
chr2 (312-356)||(32464832-32464876)
chr2 (832-912)||(42179550-42179629)
chr2 (817-906)||(3800303-3800393)
chr2 (817-898)||(14907636-14907718)
chr2 (817-898)||(23819056-23819138)
chr2 (185-224)||(25593792-25593831)
chr2 (542-581)||(25593792-25593831)
chr2 (860-913)||(22787210-22787264)
chr2 (748-805)||(24561946-24562003)
chr2 (755-807)||(25133133-25133186)
[»] scaffold0173 (2 HSPs)
scaffold0173 (156-355)||(4149-4346)
scaffold0173 (513-712)||(4149-4346)
[»] scaffold0001 (4 HSPs)
scaffold0001 (129-363)||(165717-165950)
scaffold0001 (486-720)||(165717-165950)
scaffold0001 (599-720)||(165612-165732)
scaffold0001 (242-363)||(165612-165732)
[»] chr5 (54 HSPs)
chr5 (128-296)||(32949770-32949939)
chr5 (485-653)||(32949770-32949939)
chr5 (129-355)||(7527801-7528025)
chr5 (486-712)||(7527801-7528025)
chr5 (669-824)||(25003764-25003919)
chr5 (669-824)||(34938338-34938493)
chr5 (669-824)||(23112189-23112345)
chr5 (669-824)||(2030728-2030883)
chr5 (669-824)||(29191306-29191461)
chr5 (129-297)||(17908361-17908528)
chr5 (486-654)||(17908361-17908528)
chr5 (693-820)||(23985506-23985633)
chr5 (245-355)||(17908520-17908629)
chr5 (602-712)||(17908520-17908629)
chr5 (486-624)||(23985739-23985876)
chr5 (129-267)||(23985739-23985876)
chr5 (145-258)||(2030516-2030629)
chr5 (542-615)||(2030556-2030629)
chr5 (145-258)||(25003564-25003677)
chr5 (543-615)||(25003605-25003677)
chr5 (840-914)||(20833171-20833246)
chr5 (312-390)||(34938338-34938416)
chr5 (726-810)||(32949952-32950035)
chr5 (312-403)||(2030728-2030819)
chr5 (312-390)||(29191383-29191461)
chr5 (312-403)||(25003764-25003855)
chr5 (145-242)||(34938048-34938146)
chr5 (502-599)||(34938048-34938146)
chr5 (817-913)||(37982322-37982419)
chr5 (797-901)||(10779494-10779596)
chr5 (797-901)||(11341498-11341600)
chr5 (797-912)||(11582738-11582851)
chr5 (817-913)||(23492930-23493027)
chr5 (797-912)||(25425481-25425594)
chr5 (798-912)||(27185018-27185129)
chr5 (817-912)||(21074793-21074889)
chr5 (843-914)||(35792453-35792524)
chr5 (817-906)||(4201275-4201365)
chr5 (817-898)||(19498670-19498752)
chr5 (797-912)||(11210-11323)
chr5 (817-913)||(431320-431417)
chr5 (797-912)||(1221035-1221148)
chr5 (797-912)||(9731970-9732083)
chr5 (797-912)||(22367788-22367901)
chr5 (817-901)||(25901640-25901725)
chr5 (822-901)||(110297-110377)
chr5 (735-796)||(16836509-16836569)
chr5 (823-901)||(1169857-1169935)
chr5 (817-898)||(21234723-21234805)
chr5 (312-390)||(23112266-23112345)
chr5 (832-914)||(7528030-7528111)
chr5 (797-886)||(25901550-25901634)
chr5 (817-898)||(37051863-37051945)
chr5 (797-906)||(7424539-7424647)
[»] scaffold0615 (2 HSPs)
scaffold0615 (486-712)||(7347-7571)
scaffold0615 (129-355)||(7347-7571)
[»] scaffold0023 (3 HSPs)
scaffold0023 (485-655)||(57859-58029)
scaffold0023 (128-298)||(57859-58029)
scaffold0023 (797-912)||(155541-155654)
[»] scaffold0012 (4 HSPs)
scaffold0012 (498-715)||(35104-35322)
scaffold0012 (141-358)||(35104-35322)
scaffold0012 (669-824)||(223213-223368)
scaffold0012 (312-390)||(223290-223368)
[»] scaffold1666 (2 HSPs)
scaffold1666 (485-712)||(832-1071)
scaffold1666 (128-355)||(832-1071)
[»] scaffold1486 (2 HSPs)
scaffold1486 (128-277)||(1599-1748)
scaffold1486 (485-634)||(1599-1748)
[»] scaffold0162 (6 HSPs)
scaffold0162 (669-824)||(9216-9371)
scaffold0162 (244-326)||(17897-17979)
scaffold0162 (601-683)||(17897-17979)
scaffold0162 (502-615)||(9460-9573)
scaffold0162 (145-258)||(9460-9573)
scaffold0162 (312-403)||(9280-9371)
[»] chr1 (25 HSPs)
chr1 (669-824)||(32650500-32650655)
chr1 (817-914)||(22144567-22144666)
chr1 (245-358)||(20252983-20253096)
chr1 (602-715)||(20252983-20253096)
chr1 (838-913)||(8539135-8539211)
chr1 (838-913)||(8604374-8604450)
chr1 (312-390)||(32650500-32650578)
chr1 (145-297)||(20252795-20252947)
chr1 (502-654)||(20252795-20252947)
chr1 (827-912)||(17607851-17607936)
chr1 (250-297)||(20252944-20252991)
chr1 (607-654)||(20252944-20252991)
chr1 (185-235)||(20192828-20192878)
chr1 (542-592)||(20192828-20192878)
chr1 (797-912)||(20826414-20826527)
chr1 (822-913)||(5769367-5769460)
chr1 (841-913)||(21194077-21194150)
chr1 (841-913)||(27673752-27673824)
chr1 (828-913)||(13377957-13378043)
chr1 (185-224)||(25093480-25093519)
chr1 (542-581)||(25093480-25093519)
chr1 (312-358)||(20253311-20253357)
chr1 (669-715)||(20253311-20253357)
chr1 (822-913)||(5471577-5471669)
chr1 (822-886)||(20956191-20956255)
[»] scaffold0016 (5 HSPs)
scaffold0016 (673-824)||(167355-167506)
scaffold0016 (542-615)||(167597-167670)
scaffold0016 (185-258)||(167597-167670)
scaffold0016 (316-403)||(167419-167506)
scaffold0016 (840-912)||(117792-117863)
[»] scaffold0191 (4 HSPs)
scaffold0191 (486-611)||(140-261)
scaffold0191 (129-254)||(140-261)
scaffold0191 (486-519)||(117-150)
scaffold0191 (129-162)||(117-150)
[»] scaffold0124 (3 HSPs)
scaffold0124 (669-830)||(36429-36590)
scaffold0124 (797-906)||(2768-2875)
scaffold0124 (312-375)||(36527-36590)
[»] scaffold0686 (4 HSPs)
scaffold0686 (673-824)||(7153-7304)
scaffold0686 (542-615)||(7394-7467)
scaffold0686 (185-258)||(7394-7467)
scaffold0686 (316-390)||(7230-7304)
[»] scaffold0132 (5 HSPs)
scaffold0132 (669-824)||(12698-12853)
scaffold0132 (185-258)||(12536-12609)
scaffold0132 (542-615)||(12536-12609)
scaffold0132 (312-390)||(12698-12776)
scaffold0132 (822-912)||(41592-41682)
[»] scaffold0833 (4 HSPs)
scaffold0833 (669-801)||(2055-2187)
scaffold0833 (129-292)||(1836-1997)
scaffold0833 (486-649)||(1836-1997)
scaffold0833 (312-408)||(2055-2151)
[»] scaffold0892 (2 HSPs)
scaffold0892 (185-344)||(2530-2687)
scaffold0892 (542-701)||(2530-2687)
[»] scaffold0244 (8 HSPs)
scaffold0244 (525-611)||(24434-24520)
scaffold0244 (172-254)||(24434-24516)
scaffold0244 (616-705)||(24294-24383)
scaffold0244 (259-348)||(24294-24383)
scaffold0244 (486-547)||(24381-24444)
scaffold0244 (129-190)||(24381-24444)
scaffold0244 (669-713)||(24219-24263)
scaffold0244 (312-356)||(24219-24263)
[»] scaffold0158 (4 HSPs)
scaffold0158 (669-775)||(23755-23861)
scaffold0158 (312-403)||(23755-23846)
scaffold0158 (152-242)||(23472-23563)
scaffold0158 (509-599)||(23472-23563)
[»] scaffold0125 (9 HSPs)
scaffold0125 (259-348)||(34167-34256)
scaffold0125 (616-705)||(34167-34256)
scaffold0125 (748-824)||(34650-34725)
scaffold0125 (129-190)||(34108-34169)
scaffold0125 (486-547)||(34108-34169)
scaffold0125 (486-529)||(30159-30202)
scaffold0125 (129-170)||(30159-30200)
scaffold0125 (312-356)||(34287-34331)
scaffold0125 (669-713)||(34287-34331)
[»] scaffold0029 (6 HSPs)
scaffold0029 (485-579)||(67085-67181)
scaffold0029 (128-222)||(67085-67181)
scaffold0029 (603-712)||(50979-51086)
scaffold0029 (246-355)||(50979-51086)
scaffold0029 (575-654)||(51079-51158)
scaffold0029 (218-297)||(51079-51158)
[»] scaffold0361 (2 HSPs)
scaffold0361 (669-810)||(2620-2759)
scaffold0361 (312-354)||(2620-2662)
[»] scaffold0075 (1 HSPs)
scaffold0075 (722-824)||(24238-24340)
[»] scaffold0017 (2 HSPs)
scaffold0017 (132-242)||(42445-42554)
scaffold0017 (489-599)||(42445-42554)
[»] scaffold0456 (1 HSPs)
scaffold0456 (816-914)||(12122-12221)
[»] scaffold0175 (1 HSPs)
scaffold0175 (822-914)||(6320-6414)
[»] scaffold0786 (2 HSPs)
scaffold0786 (817-901)||(581-666)
scaffold0786 (817-901)||(5636-5721)
[»] scaffold0390 (1 HSPs)
scaffold0390 (817-901)||(4169-4254)
[»] scaffold0503 (1 HSPs)
scaffold0503 (817-914)||(10490-10588)
[»] scaffold0028 (3 HSPs)
scaffold0028 (817-914)||(78570-78667)
scaffold0028 (797-912)||(90070-90183)
scaffold0028 (797-898)||(129246-129345)
[»] scaffold0151 (1 HSPs)
scaffold0151 (817-913)||(23648-23745)
[»] scaffold0025 (1 HSPs)
scaffold0025 (838-913)||(84496-84572)
[»] scaffold1427 (2 HSPs)
scaffold1427 (669-747)||(1408-1486)
scaffold1427 (312-391)||(1408-1487)
[»] scaffold0138 (9 HSPs)
scaffold0138 (145-242)||(27918-28016)
scaffold0138 (502-599)||(27918-28016)
scaffold0138 (145-242)||(39914-40012)
scaffold0138 (502-599)||(39914-40012)
scaffold0138 (312-356)||(28214-28258)
scaffold0138 (669-713)||(28214-28258)
scaffold0138 (312-356)||(40210-40254)
scaffold0138 (669-713)||(40210-40254)
scaffold0138 (838-895)||(23623-23681)
[»] scaffold0005 (2 HSPs)
scaffold0005 (542-607)||(247267-247333)
scaffold0005 (185-250)||(247267-247333)
[»] scaffold0103 (1 HSPs)
scaffold0103 (823-913)||(32469-32560)
[»] scaffold0022 (1 HSPs)
scaffold0022 (843-913)||(130809-130879)
[»] scaffold0080 (1 HSPs)
scaffold0080 (817-909)||(24789-24883)
[»] scaffold0031 (1 HSPs)
scaffold0031 (817-913)||(98344-98440)
[»] scaffold0010 (1 HSPs)
scaffold0010 (817-895)||(30008-30087)
[»] scaffold0561 (1 HSPs)
scaffold0561 (735-806)||(3999-4069)
[»] scaffold0335 (2 HSPs)
scaffold0335 (497-602)||(9517-9623)
scaffold0335 (140-245)||(9517-9623)
[»] scaffold0327 (1 HSPs)
scaffold0327 (838-895)||(4940-4998)
[»] scaffold0251 (1 HSPs)
scaffold0251 (797-912)||(15050-15163)
[»] scaffold0004 (1 HSPs)
scaffold0004 (840-913)||(85328-85402)
[»] scaffold0003 (1 HSPs)
scaffold0003 (797-912)||(6040-6153)
[»] scaffold0597 (1 HSPs)
scaffold0597 (797-906)||(2324-2430)
[»] scaffold0034 (1 HSPs)
scaffold0034 (797-898)||(78415-78513)
[»] scaffold0310 (1 HSPs)
scaffold0310 (817-906)||(1459-1549)
[»] scaffold0165 (2 HSPs)
scaffold0165 (189-232)||(20754-20797)
scaffold0165 (546-589)||(20754-20797)
[»] scaffold0141 (1 HSPs)
scaffold0141 (817-898)||(25780-25862)
[»] scaffold0053 (1 HSPs)
scaffold0053 (822-895)||(78036-78110)
[»] scaffold0243 (1 HSPs)
scaffold0243 (817-913)||(3479-3576)
[»] scaffold0116 (1 HSPs)
scaffold0116 (797-901)||(28747-28848)
[»] scaffold0107 (1 HSPs)
scaffold0107 (817-886)||(12350-12419)
[»] scaffold0078 (1 HSPs)
scaffold0078 (797-912)||(38517-38630)
[»] scaffold0057 (1 HSPs)
scaffold0057 (748-806)||(4889-4947)
[»] scaffold0026 (1 HSPs)
scaffold0026 (817-913)||(91030-91127)
[»] scaffold0009 (1 HSPs)
scaffold0009 (841-909)||(68429-68496)
[»] scaffold0006 (1 HSPs)
scaffold0006 (822-913)||(198542-198633)


Alignment Details
Target: chr3 (Bit Score: 401; Significance: 0; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 401; E-Value: 0
Query Start/End: Original strand, 498 - 914
Target Start/End: Original strand, 17936907 - 17937323
Alignment:
Q  498 atcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcac 597  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17936907 atcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcac 17937006  T
Q  598 catatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatgga 697  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17937007 catatcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatgga 17937106  T
Q  698 ctcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagaggaaaatacatcaccttaagatgaacatcac 797  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17937107 ctcaccaatatcatcaccaatatataatttcacatcaaatacatgatttgctcacattccaagtaaagaggaaaatacatcaccttaagatgaacatcac 17937206  T
Q  798 attcaacactcaactatcaatcaaatagtttcaccatttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgataatatcatatcca 897  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17937207 attcaacactcaactatcaatcaaatagtttcaccatttcaatatttctcatattacaagtaaagagaaaatacaaaatctcatgataatatcatatcca 17937306  T
Q  898 acatttaacaattcatc 914  Q
    |||||||||||||||||    
T  17937307 acatttaacaattcatc 17937323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 141 - 403
Target Start/End: Original strand, 17936907 - 17937169
Alignment:
Q  141 atcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcac 240  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17936907 atcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcac 17937006  T
Q  241 catatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatgga 340  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17937007 catatcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatgga 17937106  T
Q  341 ctcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaag 403  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||| ||  ||||||||    
T  17937107 ctcaccaatatcatcaccaatatataatttcacatcaaatacatgatttgctcacattccaag 17937169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 485 - 810
Target Start/End: Complemental strand, 11987667 - 11987344
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 584  Q
    ||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11987667 catcatcaccaaaatcatcaccaattggatatataaaaatattcgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 11987568  T
Q  585 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaa 684  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||| ||||||||    
T  11987567 cacaacaactcaccatatcatcaccattatttatttgcatttatgcaatcacaccaataattcatcaccacatgcataatcaataccatattataataaa 11987468  T
Q  685 caatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagaggaaaatacatcacctta 784  Q
    ||||||||||| ||||||||||||||||  || |  |  | |||| |||||||||||||||| ||||||||||||||| |  |||||||||||||||||     
T  11987467 caatgtatatgaactcaccaatatcatc-tcattcacataattcatatcaaatacatgatttcctcacattccaagtagaagggaaaatacatcaccttg 11987369  T
Q  785 agatgaacatcacattcaacactcaa 810  Q
    |||| ||| || ||||||||| ||||    
T  11987368 agat-aacttctcattcaacattcaa 11987344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 128 - 355
Target Start/End: Complemental strand, 11987667 - 11987440
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    ||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11987667 catcatcaccaaaatcatcaccaattggatatataaaaatattcgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 11987568  T
Q  228 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaa 327  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||| ||||||||    
T  11987567 cacaacaactcaccatatcatcaccattatttatttgcatttatgcaatcacaccaataattcatcaccacatgcataatcaataccatattataataaa 11987468  T
Q  328 caatgtatatggactcaccaatatcatc 355  Q
    ||||||||||| ||||||||||||||||    
T  11987467 caatgtatatgaactcaccaatatcatc 11987440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 141 - 357
Target Start/End: Original strand, 14283970 - 14284187
Alignment:
Q  141 atcatcaccaattggatatataaacatatct-gtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactca 239  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  14283970 atcatcaccaaatggatatataaacatatctagtcatcaccaaatatgcatgcatgaacatatgactcaataataatgcatatgtcgacacaagaactca 14284069  T
Q  240 ccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatgg 339  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| | || |||||| | ||||||||||||||||||||||||||    
T  14284070 ccatatcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcaccacattcacaatcaacatcatatcataataaacaatgtatatgg 14284169  T
Q  340 actcaccaatatcatcac 357  Q
    ||||||||||||||||||    
T  14284170 actcaccaatatcatcac 14284187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 498 - 714
Target Start/End: Original strand, 14283970 - 14284187
Alignment:
Q  498 atcatcaccaattggatatataaacatatcc-gccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactca 596  Q
    ||||||||||| ||||||||||||||||||  | |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  14283970 atcatcaccaaatggatatataaacatatctagtcatcaccaaatatgcatgcatgaacatatgactcaataataatgcatatgtcgacacaagaactca 14284069  T
Q  597 ccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatgg 696  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| | || |||||| | ||||||||||||||||||||||||||    
T  14284070 ccatatcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcaccacattcacaatcaacatcatatcataataaacaatgtatatgg 14284169  T
Q  697 actcaccaatatcatcac 714  Q
    ||||||||||||||||||    
T  14284170 actcaccaatatcatcac 14284187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 128 - 355
Target Start/End: Original strand, 38166710 - 38166936
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    |||||||| |||||| |||||||||||||| |||||||||||| |||||| ||||||||||||| |||||||||| ||||||||||||| ||||||||||    
T  38166710 catcatcatcaaaattatcaccaattggatgtataaacatatccgtcatcgccaaatatgtatgtatgaacatataactcaataataatacatatgtcca 38166809  T
Q  228 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaa 327  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||| | |||||| |||||| || |||||| ||    
T  38166810 cacaacaactcaccaaatcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcaccacatacataattaataccgtaccataat-aa 38166908  T
Q  328 caatgtatatggactcaccaatatcatc 355  Q
    |||||||||||||| |||||||||||||    
T  38166909 caatgtatatggacgcaccaatatcatc 38166936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 485 - 712
Target Start/End: Original strand, 38166710 - 38166936
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 584  Q
    |||||||| |||||| |||||||||||||| |||||||||||||| |||| ||||||||||||| |||||||||| ||||||||||||| ||||||||||    
T  38166710 catcatcatcaaaattatcaccaattggatgtataaacatatccgtcatcgccaaatatgtatgtatgaacatataactcaataataatacatatgtcca 38166809  T
Q  585 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaa 684  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||| | |||||| |||||| || |||||| ||    
T  38166810 cacaacaactcaccaaatcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcaccacatacataattaataccgtaccataat-aa 38166908  T
Q  685 caatgtatatggactcaccaatatcatc 712  Q
    |||||||||||||| |||||||||||||    
T  38166909 caatgtatatggacgcaccaatatcatc 38166936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 150; E-Value: 8e-79
Query Start/End: Original strand, 128 - 297
Target Start/End: Complemental strand, 11480580 - 11480411
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11480580 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgcatgcatgaacatatgactcaataataatgcatatgtcca 11480481  T
Q  228 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 297  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||| ||||||||    
T  11480480 cacaacaactcaccaaatcatcaccaatatttatttgcatttatgcaatcacaccaataatccatcacca 11480411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 485 - 654
Target Start/End: Complemental strand, 11480580 - 11480411
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 584  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11480580 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgcatgcatgaacatatgactcaataataatgcatatgtcca 11480481  T
Q  585 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 654  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||| ||||||||    
T  11480480 cacaacaactcaccaaatcatcaccaatatttatttgcatttatgcaatcacaccaataatccatcacca 11480411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 129 - 355
Target Start/End: Complemental strand, 12903355 - 12903132
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 228  Q
    |||||||||||| ||||||||| ||||||||||||| |||||||||  || ||   ||||||||||||||||||||||||| || ||||||||||| |||    
T  12903355 atcatcaccaaagtcatcaccacttggatatataaa-atatctgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 12903257  T
Q  229 acaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaac 328  Q
    |||||||||||||| ||  ||||||||| ||||||||||| ||||||||| || |||||||||||||| | | ||||||||||||||||||||||| |||    
T  12903256 acaacaactcaccaaattctcaccaata-ttatttgcattcatgcaatcacaccaataattcatcaccgcatacataatcaataccatatcataat-aac 12903159  T
Q  329 aatgtatatggactcaccaatatcatc 355  Q
    ||| |||||||||||||||||||||||    
T  12903158 aatatatatggactcaccaatatcatc 12903132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 486 - 712
Target Start/End: Complemental strand, 12903355 - 12903132
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 585  Q
    |||||||||||| ||||||||| ||||||||||||| ||||| | |  || ||   ||||||||||||||||||||||||| || ||||||||||| |||    
T  12903355 atcatcaccaaagtcatcaccacttggatatataaa-atatctgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 12903257  T
Q  586 acaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaac 685  Q
    |||||||||||||| ||  ||||||||| ||||||||||| ||||||||| || |||||||||||||| | | ||||||||||||||||||||||| |||    
T  12903256 acaacaactcaccaaattctcaccaata-ttatttgcattcatgcaatcacaccaataattcatcaccgcatacataatcaataccatatcataat-aac 12903159  T
Q  686 aatgtatatggactcaccaatatcatc 712  Q
    ||| |||||||||||||||||||||||    
T  12903158 aatatatatggactcaccaatatcatc 12903132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 669 - 824
Target Start/End: Original strand, 18738690 - 18738844
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagagg 768  Q
    ||||||| ||||||| ||| ||||||||| |||||||||||||||||   |  |||||||||||||| ||||||||||||||||||||||||||||||||    
T  18738690 accatattataataa-caaagtatatggattcaccaatatcatcacctccacataatttcacatcaattacatgatttgctcacattccaagtaaagagg 18738788  T
Q  769 aaaatacatcaccttaagatgaacatcacattcaacactcaactatcaatcaaata 824  Q
    ||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||    
T  18738789 aaaatacgtcaccttaagataaacatcacattgaacactcaactatcaatcaaata 18738844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 673 - 805
Target Start/End: Complemental strand, 54039857 - 54039725
Alignment:
Q  673 tatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagaggaaaa 772  Q
    ||||||||||||||||||||||||| |||||||||||||||||   || || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  54039857 tatcataataaacaatgtatatggattcaccaatatcatcaccttcatatagtttcacatcaaatacatgatttgctcacattccaagtaaagaggaaaa 54039758  T
Q  773 tacatcaccttaagatgaacatcacattcaaca 805  Q
    ||  |||||||||||| |||||||||| |||||    
T  54039757 tatgtcaccttaagataaacatcacatccaaca 54039725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 673 - 824
Target Start/End: Complemental strand, 51962477 - 51962326
Alignment:
Q  673 tatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagaggaaaa 772  Q
    ||||||||||||||||||||||||| |||||||||||||||||   |  |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  51962477 tatcataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacatcaattacatgatttgctcacattccaagtaaagaggaaaa 51962378  T
Q  773 tacatcaccttaagatgaacatcacattcaacactcaactatcaatcaaata 824  Q
    ||| |||||||||||| ||| ||||| || | | ||||||||||||| ||||    
T  51962377 tacgtcaccttaagataaacgtcacaatccatattcaactatcaatccaata 51962326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 669 - 824
Target Start/End: Original strand, 23174560 - 23174716
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgattt-gctcacattccaagtaaagag 767  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||  ||  ||||||||||||| ||| ||||||| || ||| |||||| | |||||    
T  23174560 accatatcataataaacaaagtatatggattcaccaatatcatcacctttacataatttcacatcagatatatgattttgcccactttccaaatcaagag 23174659  T
Q  768 gaaaatacatcaccttaagatgaacatcacattcaacactcaactatcaatcaaata 824  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||    
T  23174660 gaaaatacatcaccttaagataaacatcacattcaacactcatctatcaattaaata 23174716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 669 - 796
Target Start/End: Original strand, 18892840 - 18892967
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagagg 768  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||  ||  ||||| ||||||||||| ||||||||| ||| |||||||| ||||||    
T  18892840 accatatcataataaacaatgtatatggattcaccaatatcatcacctttacataattacacatcaaatatatgatttgcccactttccaagtcaagagg 18892939  T
Q  769 aaaatacatcaccttaagatgaacatca 796  Q
    ||||||||||||||||||||||||||||    
T  18892940 aaaatacatcaccttaagatgaacatca 18892967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 173 - 254
Target Start/End: Complemental strand, 9304181 - 9304100
Alignment:
Q  173 tcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaa 254  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  9304181 tcatcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgtccacacaacaactcaccatatcatcaccaa 9304100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 129 - 258
Target Start/End: Original strand, 18738472 - 18738601
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 228  Q
    ||||||||||| |||||||||| ||||||||||||| ||||| |||  || ||   |||||||||||||||||||||||||||| ||||||||||| ||     
T  18738472 atcatcaccaatatcatcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaataacaatgcatatgttcat 18738571  T
Q  229 acaacaactcaccatatcatcaccaatatt 258  Q
    ||||||||||||||||||||||||| ||||    
T  18738572 acaacaactcaccatatcatcaccactatt 18738601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 486 - 615
Target Start/End: Original strand, 18738472 - 18738601
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 585  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||| |  || ||   |||||||||||||||||||||||||||| ||||||||||| ||     
T  18738472 atcatcaccaatatcatcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaataacaatgcatatgttcat 18738571  T
Q  586 acaacaactcaccatatcatcaccaatatt 615  Q
    ||||||||||||||||||||||||| ||||    
T  18738572 acaacaactcaccatatcatcaccactatt 18738601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 531 - 611
Target Start/End: Complemental strand, 9304180 - 9304100
Alignment:
Q  531 catcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaa 611  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  9304180 catcaccaaatatgtatgcatgaacatatgactcaacaacaatgcatatgtccacacaacaactcaccatatcatcaccaa 9304100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 673 - 796
Target Start/End: Original strand, 18889617 - 18889741
Alignment:
Q  673 tatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatc-aaatacatgatttgctcacattccaagtaaagaggaaa 771  Q
    ||||||||||||||||||||||||| |||||||||||||||||  ||  ||||||||||||   ||| ||||||||| ||| |||||||| || ||||||    
T  18889617 tatcataataaacaatgtatatggattcaccaatatcatcacctttacataatttcacatcttgatatatgatttgcccactttccaagtcaaaaggaaa 18889716  T
Q  772 atacatcaccttaagatgaacatca 796  Q
    ||||||||||||||||| |||||||    
T  18889717 atacatcaccttaagataaacatca 18889741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 603 - 712
Target Start/End: Complemental strand, 11480418 - 11480311
Alignment:
Q  603 catcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcac 702  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||  | ||||||||||||||||||| ||| ||||| ||||| || |||||    
T  11480418 catcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca-atacataatcaataccatatcacaat-aacaacgtatacgggctcac 11480321  T
Q  703 caatatcatc 712  Q
    ||||||||||    
T  11480320 caatatcatc 11480311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 246 - 355
Target Start/End: Complemental strand, 11480418 - 11480311
Alignment:
Q  246 catcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcac 345  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||  | ||||||||||||||||||| ||| ||||| ||||| || |||||    
T  11480418 catcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca-atacataatcaataccatatcacaat-aacaacgtatacgggctcac 11480321  T
Q  346 caatatcatc 355  Q
    ||||||||||    
T  11480320 caatatcatc 11480311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 817 - 913
Target Start/End: Complemental strand, 9592024 - 9591926
Alignment:
Q  817 atcaaatagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattcat 913  Q
    |||| ||||||||| |||| ||| ||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||| |||||||||||    
T  9592024 atcacatagtttcatcattccaaatatttttcatattacaagtaaagagaaaatacaacatcttatgatcaatatcatatccagcatctaacaattcat 9591926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 817 - 909
Target Start/End: Complemental strand, 33370134 - 33370040
Alignment:
Q  817 atcaaatagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaat 909  Q
    |||| |||||||||||| ||||| ||||||||||||| |||||||||||||||||||||| || ||||| ||||||||||||||||| |||||||    
T  33370134 atcatatagtttcaccacttcaaatatttctcatattccaagtaaagagaaaatacaacaccttatgataaatatcatatccaacatataacaat 33370040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 486 - 547
Target Start/End: Complemental strand, 9304110 - 9304049
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtat 547  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  9304110 atcatcaccaaaatcatcaccaattggatatataaacatatccgtcatcaccaaacatgtat 9304049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 9304110 - 9304049
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtat 190  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  9304110 atcatcaccaaaatcatcaccaattggatatataaacatatccgtcatcaccaaacatgtat 9304049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 817 - 913
Target Start/End: Original strand, 47983791 - 47983887
Alignment:
Q  817 atcaaatagtttcaccatttcaatatttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatatccaacatttaacaattcat 913  Q
    |||||||||||||| ||||||||||||||||||||  ||||| ||||||| ||||||||||||||||  ||||||||||| | ||| |||||||||||    
T  47983791 atcaaatagtttcatcatttcaatatttctcatatcccaagt-aagagaacatacaacatctcatgacaaatatcatatcgatcatataacaattcat 47983887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 817 - 913
Target Start/End: Original strand, 47993078 - 47993174
Alignment:
Q  817 atcaaatagtttcaccatttcaatatttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatatccaacatttaacaattcat 913  Q
    |||||||||||||| ||||||||||||||||||||  ||||| ||||||| ||||||||||||||||  ||||||||||| | ||| |||||||||||    
T  47993078 atcaaatagtttcatcatttcaatatttctcatatcccaagt-aagagaacatacaacatctcatgacaaatatcatatcgatcatataacaattcat 47993174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 817 - 913
Target Start/End: Original strand, 48002365 - 48002461
Alignment:
Q  817 atcaaatagtttcaccatttcaatatttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatatccaacatttaacaattcat 913  Q
    |||||||||||||| ||||||||||||||||||||  ||||| ||||||| ||||||||||||||||  ||||||||||| | ||| |||||||||||    
T  48002365 atcaaatagtttcatcatttcaatatttctcatatcccaagt-aagagaacatacaacatctcatgacaaatatcatatcgatcatataacaattcat 48002461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 817 - 913
Target Start/End: Original strand, 48011651 - 48011747
Alignment:
Q  817 atcaaatagtttcaccatttcaatatttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatatccaacatttaacaattcat 913  Q
    |||||||||||||| ||||||||||||||||||||  ||||| ||||||| ||||||||||||||||  ||||||||||| | ||| |||||||||||    
T  48011651 atcaaatagtttcatcatttcaatatttctcatatcccaagt-aagagaacatacaacatctcatgacaaatatcatatcgatcatataacaattcat 48011747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 542 - 615
Target Start/End: Complemental strand, 51962663 - 51962590
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaatatt 615  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||||||||||| ||||||  |||||||||||    
T  51962663 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcgccatattctcaccaatatt 51962590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 185 - 258
Target Start/End: Complemental strand, 51962663 - 51962590
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaatatt 258  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||||||||||| ||||||  |||||||||||    
T  51962663 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcgccatattctcaccaatatt 51962590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 316 - 403
Target Start/End: Complemental strand, 54039857 - 54039770
Alignment:
Q  316 tatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaag 403  Q
    ||||||||||||||||||||||||| |||||||||||||||||   || || ||||||||||||| ||||||||| ||  ||||||||    
T  54039857 tatcataataaacaatgtatatggattcaccaatatcatcaccttcatatagtttcacatcaaatacatgatttgctcacattccaag 54039770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 312 - 390
Target Start/End: Original strand, 18892840 - 18892918
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttg 390  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||  ||  ||||| ||||||||||  ||||||||    
T  18892840 accatatcataataaacaatgtatatggattcaccaatatcatcacctttacataattacacatcaaatatatgatttg 18892918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 838 - 900
Target Start/End: Original strand, 41660530 - 41660593
Alignment:
Q  838 aatatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaaca 900  Q
    ||||||||||||||| |||||||||||||||||||||| || ||||| ||||||||||||||||    
T  41660530 aatatttctcatatttcaagtaaagagaaaatacaacaccttatgataaatatcatatccaaca 41660593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 316 - 403
Target Start/End: Complemental strand, 51962477 - 51962390
Alignment:
Q  316 tatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaag 403  Q
    ||||||||||||||||||||||||| |||||||||||||||||   |  |||||||||||||| | ||||||||| ||  ||||||||    
T  51962477 tatcataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacatcaattacatgatttgctcacattccaag 51962390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 54040151 - 54040053
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 242  Q
    |||||| ||||||||||||| |||||||||  || ||   ||||||| ||||||||||||||||| || ||||||||||| ||||| ||||||||||||    
T  54040151 tcaccatttggatatataaaaatatctgtctccatcagtcatgtatgtatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 54040053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 54049438 - 54049340
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 242  Q
    |||||| ||||||||||||| |||||||||  || ||   ||||||| ||||||||||||||||| || ||||||||||| ||||| ||||||||||||    
T  54049438 tcaccatttggatatataaaaatatctgtctccatcagtcatgtatgtatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 54049340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 796 - 906
Target Start/End: Complemental strand, 17957633 - 17957525
Alignment:
Q  796 acattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcata 893  Q
    |||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||| ||||||| ||||| ||||||||||||||||| |||||||||    
T  17957633 acattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatattccaagtaa-gagaacatacaacatctcatgataaatatcata 17957538  T
Q  894 tccaacatttaac 906  Q
    |||||||| ||||    
T  17957537 tccaacatataac 17957525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 312 - 377
Target Start/End: Original strand, 23174560 - 23174625
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatca 377  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||  ||  |||||||||||||    
T  23174560 accatatcataataaacaaagtatatggattcaccaatatcatcacctttacataatttcacatca 23174625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 797 - 913
Target Start/End: Original strand, 16819767 - 16819880
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcatat 894  Q
    ||||||||| ||||||||||  || ||||||||||||||||||   |||||||||| ||||||| || ||||  ||||||||||||||| ||||||||||    
T  16819767 cattcaaca-tcaactatca--catatagtttcaccatttcaagcattctcatattccaagtaatagggaaa--acaacatctcatgataaatatcatat 16819861  T
Q  895 ccaacatttaacaattcat 913  Q
    ||||||| |||| ||||||    
T  16819862 ccaacatataaccattcat 16819880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 316 - 376
Target Start/End: Original strand, 18889617 - 18889677
Alignment:
Q  316 tatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatc 376  Q
    ||||||||||||||||||||||||| |||||||||||||||||  ||  ||||||||||||    
T  18889617 tatcataataaacaatgtatatggattcaccaatatcatcacctttacataatttcacatc 18889677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 669 - 712
Target Start/End: Complemental strand, 9303713 - 9303670
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatc 712  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  9303713 accatatcataataaacaatgtatatggattcaccaatatcatc 9303670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 312 - 355
Target Start/End: Complemental strand, 9303713 - 9303670
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatc 355  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  9303713 accatatcataataaacaatgtatatggattcaccaatatcatc 9303670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 797 - 912
Target Start/End: Original strand, 33340704 - 33340817
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatat 894  Q
    ||||||||| ||||||||||  || |||||||||||||| |||  | |||||||||| ||||||| ||||| ||||||||||||||||  ||||||||||    
T  33340704 cattcaaca-tcaactatca--catatagtttcaccattccaaacaattctcatattccaagtaa-gagaacatacaacatctcatgacaaatatcatat 33340799  T
Q  895 ccaacatttaacaattca 912  Q
    ||||||| |||| |||||    
T  33340800 ccaacatataaccattca 33340817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 817 - 913
Target Start/End: Original strand, 34558780 - 34558876
Alignment:
Q  817 atcaaatagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattcat 913  Q
    |||| |||||||||||| | ||| ||||||||||||| ||||| ||||||| ||||||||||| ||||| |||||||||| |||||| |||||||||||    
T  34558780 atcatatagtttcaccactccaaatatttctcatattccaagt-aagagaacatacaacatcttatgataaatatcatat-caacatataacaattcat 34558876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 832 - 901
Target Start/End: Original strand, 14284190 - 14284258
Alignment:
Q  832 catttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgataatatcatatccaacat 901  Q
    |||| |||||||||||||||  ||||||| ||||| |||||||| |||||| ||||||||||||||||||    
T  14284190 cattacaatatttctcatataccaagtaa-gagaacatacaacacctcatgttaatatcatatccaacat 14284258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 616 - 715
Target Start/End: Complemental strand, 9304051 - 9303952
Alignment:
Q  616 tatttgcatttatgcaatcatacgaataattcatcaccacttgcataatca-ataccatatcataataaacaatgtatatggactcaccaatatcatcac 714  Q
    |||||||||||||||||||| |  ||||||||||||||||||  ||||||| | ||||| ||||||||||| ||    ||||| ||||||||||||||||    
T  9304051 tatttgcatttatgcaatcacatcaataattcatcaccacttatataatcatacaccatgtcataataaac-atacgcatggattcaccaatatcatcac 9303953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 259 - 358
Target Start/End: Complemental strand, 9304051 - 9303952
Alignment:
Q  259 tatttgcatttatgcaatcatacgaataattcatcaccacttgcataatca-ataccatatcataataaacaatgtatatggactcaccaatatcatcac 357  Q
    |||||||||||||||||||| |  ||||||||||||||||||  ||||||| | ||||| ||||||||||| ||    ||||| ||||||||||||||||    
T  9304051 tatttgcatttatgcaatcacatcaataattcatcaccacttatataatcatacaccatgtcataataaac-atacgcatggattcaccaatatcatcac 9303953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 843 - 914
Target Start/End: Original strand, 16259946 - 16260017
Alignment:
Q  843 ttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatatccaacatttaacaattcatc 914  Q
    |||||||||| ||||||| ||||| |||||||||||||||| || ||||||||||||||| |||| |||||||    
T  16259946 ttctcatattccaagtaa-gagaacatacaacatctcatgacaattatcatatccaacatataaccattcatc 16260017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 797 - 912
Target Start/End: Complemental strand, 2450626 - 2450513
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||  ||||||| ||||| |||||||||||||||| || ||||||||    
T  2450626 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatatcccaagtaa-gagaacatacaacatctcatgacaaatatcatat 2450531  T
Q  895 ccaacatttaacaattca 912  Q
    ||||||| |||| |||||    
T  2450530 ccaacatataaccattca 2450513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 843 - 912
Target Start/End: Original strand, 7852713 - 7852782
Alignment:
Q  843 ttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatatccaacatttaacaattca 912  Q
    |||||||||| ||||||| ||||| ||||||||||||||||  ||||||||||||||||| |||| |||||    
T  7852713 ttctcatattccaagtaa-gagaacatacaacatctcatgacaaatatcatatccaacatataaccattca 7852782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 797 - 912
Target Start/End: Original strand, 18909548 - 18909661
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||| ||||||| ||||| ||||||||| |||||| || ||||||||    
T  18909548 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatattccaagtaa-gagaacatacaacatttcatgacaaatatcatat 18909643  T
Q  895 ccaacatttaacaattca 912  Q
    ||||||| |||| |||||    
T  18909644 ccaacatataaccattca 18909661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 797 - 912
Target Start/End: Original strand, 22273903 - 22274016
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||  ||||||| ||||| ||||||||||||||||  ||||||||||    
T  22273903 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatatcccaagtaa-gagaacatacaacatctcatgacaaatatcatat 22273998  T
Q  895 ccaacatttaacaattca 912  Q
    ||||||| |||| |||||    
T  22273999 ccaacatataaccattca 22274016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 797 - 912
Target Start/End: Original strand, 53769519 - 53769632
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||| ||||||| ||||| ||||||||| |||||| || ||||||||    
T  53769519 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatattccaagtaa-gagaacatacaacatttcatgacaaatatcatat 53769614  T
Q  895 ccaacatttaacaattca 912  Q
    ||||||| |||| |||||    
T  53769615 ccaacatataaccattca 53769632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 542 - 599
Target Start/End: Complemental strand, 54040111 - 54040053
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 599  Q
    ||||||| ||||||||||||||||| || ||||||||||| ||||| ||||||||||||    
T  54040111 atgtatgtatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 54040053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 542 - 599
Target Start/End: Complemental strand, 54049398 - 54049340
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 599  Q
    ||||||| ||||||||||||||||| || ||||||||||| ||||| ||||||||||||    
T  54049398 atgtatgtatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 54049340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 817 - 895
Target Start/End: Original strand, 12951932 - 12952011
Alignment:
Q  817 atcaaatagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatc 895  Q
    |||| |||||||||||| | ||| ||||||||||||| ||||| ||||||| ||||||||||| ||||| |||||||||||    
T  12951932 atcatatagtttcaccactccaaatatttctcatattccaagt-aagagaacatacaacatcttatgataaatatcatatc 12952011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 859 - 914
Target Start/End: Complemental strand, 13327790 - 13327734
Alignment:
Q  859 aaagagaaaatacaacatctcatgataa-tatcatatccaacatttaacaattcatc 914  Q
    |||||||||||||| ||| | ||||||| ||||||||||||||| ||||||||||||    
T  13327790 aaagagaaaatacatcatattatgataaatatcatatccaacatctaacaattcatc 13327734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 841 - 900
Target Start/End: Original strand, 48420582 - 48420641
Alignment:
Q  841 atttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaaca 900  Q
    |||||||||||| ||||||| ||||| ||||||||||| ||||| ||||||||||||||||    
T  48420582 atttctcatattccaagtaa-gagaacatacaacatcttatgataaatatcatatccaaca 48420641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 224
Target Start/End: Original strand, 10903074 - 10903113
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgt 224  Q
    ||||||||||||||||||||||| | ||||||||||||||    
T  10903074 atgtatgcatgaacatatgactcgacaataatgcatatgt 10903113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 542 - 581
Target Start/End: Original strand, 10903074 - 10903113
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatgt 581  Q
    ||||||||||||||||||||||| | ||||||||||||||    
T  10903074 atgtatgcatgaacatatgactcgacaataatgcatatgt 10903113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 823 - 901
Target Start/End: Original strand, 15549428 - 15549505
Alignment:
Q  823 tagtttcaccatttcaatatttctcatattacaagtaaagagaaaatacaacatctcat-gataatatcatatccaacat 901  Q
    ||||||||||| | |||| | ||||||||| ||||||| ||||| |||||||||||||| || |||||||||||||||||    
T  15549428 tagtttcaccaatccaat-tgtctcatattccaagtaa-gagaacatacaacatctcatggaaaatatcatatccaacat 15549505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 817 - 906
Target Start/End: Complemental strand, 16745451 - 16745361
Alignment:
Q  817 atcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatga-taatatcatatccaacatttaac 906  Q
    |||| ||||||||||||||||||   |||||||||| ||||||| || ||||| ||||||||||||||  |||||||||| |||||| ||||    
T  16745451 atcatatagtttcaccatttcaagcattctcatattccaagtaatagggaaaa-acaacatctcatgacaaatatcatattcaacatataac 16745361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 312 - 403
Target Start/End: Original strand, 18738690 - 18738780
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaag 403  Q
    ||||||| ||||||| ||| ||||||||| |||||||||||||||||   |  |||||||||||||| | ||||||||| ||  ||||||||    
T  18738690 accatattataataa-caaagtatatggattcaccaatatcatcacctccacataatttcacatcaattacatgatttgctcacattccaag 18738780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 748 - 806
Target Start/End: Original strand, 8603655 - 8603713
Alignment:
Q  748 ctcacattccaagtaaagaggaaaatacatcaccttaagatgaacatcacattcaacac 806  Q
    |||||| |||||||||||  ||||||||| ||||||| ||| ||||||| |||||||||    
T  8603655 ctcacaatccaagtaaaggagaaaatacaacaccttatgataaacatcatattcaacac 8603713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 797 - 901
Target Start/End: Complemental strand, 51159775 - 51159674
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatc 895  Q
    ||||||||| ||||||||||  || |||||||||||| |||||   |||||||||| |||||||| ||  || ||||||||||||||| ||||||||||     
T  51159775 cattcaaca-tcaactatca--catatagtttcaccaattcaaacattctcatattccaagtaaa-agggaaaacaacatctcatgataaatatcatatt 51159680  T
Q  896 caacat 901  Q
    ||||||    
T  51159679 caacat 51159674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 866 - 914
Target Start/End: Original strand, 14079522 - 14079570
Alignment:
Q  866 aaatacaacatctcatgat-aatatcatatccaacatttaacaattcatc 914  Q
    ||||||||||||||||||| ||||||||||||||||| | ||||||||||    
T  14079522 aaatacaacatctcatgataaatatcatatccaacatct-acaattcatc 14079570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 822 - 913
Target Start/End: Original strand, 39654797 - 39654889
Alignment:
Q  822 atagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatatccaacatttaacaattcat 913  Q
    ||||||| |||||||||| ||||||||| |||  |||||| ||| | ||||||||||| |||| || ||||||||||||||| |||| ||||||    
T  39654797 atagttttaccatttcaagtatttctcacattctaagtaa-gaggacatacaacatcttatgacaaatatcatatccaacatataaccattcat 39654889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 237; Significance: 1e-130; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-130
Query Start/End: Original strand, 485 - 824
Target Start/End: Original strand, 13319959 - 13320298
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaa-tatgtatgcatgaacatatgactcaataataatgcatatgtcc 583  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13319959 catcatcaccaaaatcatcaccaattggatatataaaaatatccgtcatcaccaaaatatgtatgcatgaacatatgactcaataataatgcatatgtcc 13320058  T
Q  584 acacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataa 683  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||| | |||||||| |||||||||||||| |||    
T  13320059 acacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcacaccaatgattcatcacctcatgcataattaataccatatcatagtaa 13320158  T
Q  684 acaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagaggaaaatacatcacctt 783  Q
    |||||||||||||||||||||||||||||  || |  |  | |||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  13320159 acaatgtatatggactcaccaatatcatc-tcattcacataattcatatcaaatacatgatttgctcacattccaagtaaagagaaaaatacgtcacctt 13320257  T
Q  784 aagatgaacatcacattcaacactcaactatcaatcaaata 824  Q
    ||||| |||||||||||| |||||| |||||||||||||||    
T  13320258 aagataaacatcacattcgacactcgactatcaatcaaata 13320298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 128 - 355
Target Start/End: Original strand, 13319959 - 13320187
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaa-tatgtatgcatgaacatatgactcaataataatgcatatgtcc 226  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13319959 catcatcaccaaaatcatcaccaattggatatataaaaatatccgtcatcaccaaaatatgtatgcatgaacatatgactcaataataatgcatatgtcc 13320058  T
Q  227 acacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataa 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||| | |||||||| |||||||||||||| |||    
T  13320059 acacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcacaccaatgattcatcacctcatgcataattaataccatatcatagtaa 13320158  T
Q  327 acaatgtatatggactcaccaatatcatc 355  Q
    |||||||||||||||||||||||||||||    
T  13320159 acaatgtatatggactcaccaatatcatc 13320187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 180; E-Value: 1e-96
Query Start/End: Original strand, 128 - 355
Target Start/End: Original strand, 3048391 - 3048617
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3048391 catcatcaccaaaatcatcatcaattggatatataaacatatccgtcatcaccaaatatgtatgtatgaacatatgactcaataataatgcatatgtcca 3048490  T
Q  228 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaa 327  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||| | |||||||||||||||| |||||| ||    
T  3048491 cacaacaactcaccaaatcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcaccacatacataatcaataccataccataat-aa 3048589  T
Q  328 caatgtatatggactcaccaatatcatc 355  Q
    |||||||||||||| |||||||||||||    
T  3048590 caatgtatatggacgcaccaatatcatc 3048617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 180; E-Value: 1e-96
Query Start/End: Original strand, 485 - 712
Target Start/End: Original strand, 3048391 - 3048617
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 584  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3048391 catcatcaccaaaatcatcatcaattggatatataaacatatccgtcatcaccaaatatgtatgtatgaacatatgactcaataataatgcatatgtcca 3048490  T
Q  585 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaa 684  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||| | |||||||||||||||| |||||| ||    
T  3048491 cacaacaactcaccaaatcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcaccacatacataatcaataccataccataat-aa 3048589  T
Q  685 caatgtatatggactcaccaatatcatc 712  Q
    |||||||||||||| |||||||||||||    
T  3048590 caatgtatatggacgcaccaatatcatc 3048617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 669 - 824
Target Start/End: Complemental strand, 47482216 - 47482061
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagagg 768  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||    || |||||||||||||||||||||||||||||||||||||||||||||||    
T  47482216 accatatcataataaacaatatatatggattcaccaatatcatcacattcatataatttcacatcaaatacatgatttgctcacattccaagtaaagagg 47482117  T
Q  769 aaaatacatcaccttaagatgaacatcacattcaacactcaactatcaatcaaata 824  Q
     |||||| |||||||||||| |||||||||||| | | |||||||||| |||||||    
T  47482116 gaaatacgtcaccttaagataaacatcacattccatattcaactatcagtcaaata 47482061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 486 - 649
Target Start/End: Complemental strand, 47482433 - 47482272
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 585  Q
    |||||||||||||||||||| | ||||||||||||| ||||||| |  || ||   ||||||||||||||||||||||||||||||||||||||||||||    
T  47482433 atcatcaccaaaatcatcacaatttggatatataaa-atatccgtctccatcagtcatgtatgcatgaacatatgactcaataataatgcatatgtccac 47482335  T
Q  586 acaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcat 649  Q
    |||||||||||||| ||  ||||||||| ||||||||||||||||||||| || ||||||||||    
T  47482334 acaacaactcaccaaattctcaccaata-ttatttgcatttatgcaatcacaccaataattcat 47482272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 129 - 292
Target Start/End: Complemental strand, 47482433 - 47482272
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 228  Q
    |||||||||||||||||||| | ||||||||||||| ||||| |||  || ||   ||||||||||||||||||||||||||||||||||||||||||||    
T  47482433 atcatcaccaaaatcatcacaatttggatatataaa-atatccgtctccatcagtcatgtatgcatgaacatatgactcaataataatgcatatgtccac 47482335  T
Q  229 acaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcat 292  Q
    |||||||||||||| ||  ||||||||| ||||||||||||||||||||| || ||||||||||    
T  47482334 acaacaactcaccaaattctcaccaata-ttatttgcatttatgcaatcacaccaataattcat 47482272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 486 - 701
Target Start/End: Complemental strand, 48623875 - 48623663
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 585  Q
    |||||||||||||||||||||| || ||||| |||| ||||||  |  || ||   ||||||||||||||||||||||||||||||||||||||||||||    
T  48623875 atcatcaccaaaatcatcaccatttagatatgtaaa-atatccatctccatcagtcatgtatgcatgaacatatgactcaataataatgcatatgtccac 48623777  T
Q  586 acaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaac 685  Q
    |||||||||||||| ||  ||||||||| ||||||||||||| || |||| || |||||||||||||||| |  |||||||  | ||||||| ||| |||    
T  48623776 acaacaactcaccaaattctcaccaata-ttatttgcatttacgcgatcacaccaataattcatcaccacataaataatcatcatcatatcacaat-aac 48623679  T
Q  686 aatgtatatggactca 701  Q
    ||| |||||| |||||    
T  48623678 aatatatatgaactca 48623663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 129 - 344
Target Start/End: Complemental strand, 48623875 - 48623663
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 228  Q
    |||||||||||||||||||||| || ||||| |||| |||||  ||  || ||   ||||||||||||||||||||||||||||||||||||||||||||    
T  48623875 atcatcaccaaaatcatcaccatttagatatgtaaa-atatccatctccatcagtcatgtatgcatgaacatatgactcaataataatgcatatgtccac 48623777  T
Q  229 acaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaac 328  Q
    |||||||||||||| ||  ||||||||| ||||||||||||| || |||| || |||||||||||||||| |  |||||||  | ||||||| ||| |||    
T  48623776 acaacaactcaccaaattctcaccaata-ttatttgcatttacgcgatcacaccaataattcatcaccacataaataatcatcatcatatcacaat-aac 48623679  T
Q  329 aatgtatatggactca 344  Q
    ||| |||||| |||||    
T  48623678 aatatatatgaactca 48623663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 669 - 810
Target Start/End: Complemental strand, 15761473 - 15761333
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagagg 768  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||   |  |||||||||||||  |||||||||||||||||||||||||||| |||    
T  15761473 accatatcataataaacaatgtatatggattcaccaaaatcatcaccttcacataatttcacatcacttacatgatttgctcacattccaagtaaaaagg 15761374  T
Q  769 aaaatacatcaccttaagatgaacatcacattcaacactcaa 810  Q
    ||||||||||||||| |||| ||| || ||||||||| ||||    
T  15761373 aaaatacatcaccttgagat-aacttctcattcaacattcaa 15761333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 669 - 833
Target Start/End: Complemental strand, 7285743 - 7285580
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagagg 768  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||||   |  ||||||||||||||| |||||||||||||||||||||||||||||||    
T  7285743 accatatcataataaacaatgtatatgaatccaccaatatcatcaccttcacataatttcacatcaaacacatgatttgctcacattccaagtaaagagg 7285644  T
Q  769 aaaat-acatcaccttaagatgaacatcacattcaacactcaactatcaatcaaatagtttcacca 833  Q
    || || || ||| |||||||| |||||||||||| | |  |||||||||  || ||||||||||||    
T  7285643 aagataacgtcatcttaagataaacatcacattccatatccaactatca--catatagtttcacca 7285580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 146 - 242
Target Start/End: Complemental strand, 7286032 - 7285936
Alignment:
Q  146 caccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcacca 242  Q
    ||||| ||||||||||||| |||||||||  || ||   |||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||    
T  7286032 caccatttggatatataaaaatatctgtcgccatcagtcatgtatgcatgaacatatgaatcaacaataatgcatatgttcacacaacaactcacca 7285936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 312 - 403
Target Start/End: Complemental strand, 47482216 - 47482125
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaag 403  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||    || |||||||||||||||| ||||||||| ||  ||||||||    
T  47482216 accatatcataataaacaatatatatggattcaccaatatcatcacattcatataatttcacatcaaatacatgatttgctcacattccaag 47482125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 542 - 599
Target Start/End: Complemental strand, 7285993 - 7285936
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcacca 599  Q
    |||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||    
T  7285993 atgtatgcatgaacatatgaatcaacaataatgcatatgttcacacaacaactcacca 7285936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 502 - 599
Target Start/End: Complemental strand, 14252907 - 14252809
Alignment:
Q  502 tcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 599  Q
    |||||| ||||||||||||| ||||||| |  || ||   ||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||    
T  14252907 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 14252809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 14252907 - 14252809
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 242  Q
    |||||| ||||||||||||| ||||| |||  || ||   ||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||    
T  14252907 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 14252809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 312 - 403
Target Start/End: Complemental strand, 7285743 - 7285652
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaag 403  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||||   |  |||||||||||||||  ||||||||| ||  ||||||||    
T  7285743 accatatcataataaacaatgtatatgaatccaccaatatcatcaccttcacataatttcacatcaaacacatgatttgctcacattccaag 7285652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 312 - 403
Target Start/End: Complemental strand, 15761473 - 15761382
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaag 403  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||   |  |||||||||||||  | ||||||||| ||  ||||||||    
T  15761473 accatatcataataaacaatgtatatggattcaccaaaatcatcaccttcacataatttcacatcacttacatgatttgctcacattccaag 15761382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 797 - 913
Target Start/End: Complemental strand, 15952396 - 15952282
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||| ||||||| ||||| |||||||||||||||| || ||||||||    
T  15952396 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatattccaagtaa-gagaacatacaacatctcatgacaaatatcatat 15952301  T
Q  895 ccaacatttaacaattcat 913  Q
    ||||||| |||| ||||||    
T  15952300 ccaacatataaccattcat 15952282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 817 - 913
Target Start/End: Complemental strand, 9057921 - 9057825
Alignment:
Q  817 atcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatatccaacatttaacaattcat 913  Q
    |||| |||||||||||| | |||| |||||||||||| ||||||| ||||| ||||||||||| ||||||| |||||||| |||||| |||||||||||    
T  9057921 atcatatagtttcaccactccaattatttctcatattccaagtaa-gagaacatacaacatcttatgataagtatcatat-caacatataacaattcat 9057825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 817 - 906
Target Start/End: Complemental strand, 13912396 - 13912306
Alignment:
Q  817 atcaaatagtttcaccatttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaac 906  Q
    |||| ||||||||||||||||||   |||||||||| ||||||| | | ||| ||||||||||||||| |||||||||| |||||| ||||    
T  13912396 atcatatagtttcaccatttcaagcattctcatattccaagtaatggggaaaaacaacatctcatgataaatatcatattcaacatataac 13912306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 817 - 913
Target Start/End: Original strand, 48354254 - 48354350
Alignment:
Q  817 atcaaatagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatatccaacatttaacaattcat 913  Q
    |||| |||||||||||| | ||| ||||||||||||| ||||||| ||||| ||||||||||| ||||||| |||||||| |||||| |||||||||||    
T  48354254 atcatatagtttcaccactccaaatatttctcatattccaagtaa-gagaacatacaacatcttatgataattatcatat-caacatataacaattcat 48354350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 669 - 714
Target Start/End: Complemental strand, 14252613 - 14252568
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcac 714  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||    
T  14252613 accatatcataataaacaatgtatatggattcatcaatatcatcac 14252568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 14252613 - 14252568
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcac 357  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||    
T  14252613 accatatcataataaacaatgtatatggattcatcaatatcatcac 14252568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 843 - 914
Target Start/End: Complemental strand, 2191952 - 2191881
Alignment:
Q  843 ttctcatattacaagtaaagagaaaatacaacatctcatgataat-atcatatccaacatttaacaattcatc 914  Q
    |||||||||| ||||||| ||||| |||||||||||||||| ||| |||||||||||||| |||| |||||||    
T  2191952 ttctcatattccaagtaa-gagaacatacaacatctcatgacaattatcatatccaacatataaccattcatc 2191881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 838 - 913
Target Start/End: Complemental strand, 9322293 - 9322217
Alignment:
Q  838 aatatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattcat 913  Q
    |||| |||||||||| |||||||||||||||| ||||| || ||||| |||||||||| |||||  |||||||||||    
T  9322293 aatacttctcatattccaagtaaagagaaaatgcaacaccttatgataaatatcatattcaacacctaacaattcat 9322217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 797 - 913
Target Start/End: Complemental strand, 16480236 - 16480122
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||| ||||||| ||||| |||||||||| ||||| || ||||||||    
T  16480236 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatattccaagtaa-gagaacatacaacatcacatgacaaatatcatat 16480141  T
Q  895 ccaacatttaacaattcat 913  Q
    ||||||| |||| ||||||    
T  16480140 ccaacatataaccattcat 16480122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 832 - 898
Target Start/End: Original strand, 3048622 - 3048687
Alignment:
Q  832 catttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgataatatcatatccaa 898  Q
    |||| |||||||||||||||  ||||||| ||||| |||||||| |||||| |||||||||||||||    
T  3048622 cattacaatatttctcatataccaagtaa-gagaacatacaacacctcatgttaatatcatatccaa 3048687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 817 - 901
Target Start/End: Original strand, 11515002 - 11515087
Alignment:
Q  817 atcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgata-atatcatatccaacat 901  Q
    |||| ||||||||||||||||||   |||||||||| ||||||| || ||||| |||||||||||||||| ||||||||| ||||||    
T  11515002 atcatatagtttcaccatttcaagcattctcatattccaagtaatagggaaaa-acaacatctcatgatagatatcatattcaacat 11515087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 797 - 912
Target Start/End: Original strand, 16417328 - 16417441
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||  ||||||| ||||| |||||||||||||||| || ||||||||    
T  16417328 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatatcccaagtaa-gagaacatacaacatctcatgacaattatcatat 16417423  T
Q  895 ccaacatttaacaattca 912  Q
    ||||||| |||| |||||    
T  16417424 ccaacatataaccattca 16417441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 840 - 913
Target Start/End: Complemental strand, 20584129 - 20584056
Alignment:
Q  840 tatttctcatattacaagtaaagagaaaatacaacatctcatgataat-atcatatccaacatttaacaattcat 913  Q
    ||||||||||||| ||||||| |||||||||||||| |  |||||||  ||||||||||||| ||||||||||||    
T  20584129 tatttctcatatttcaagtaa-gagaaaatacaacaccctatgataaacatcatatccaacacttaacaattcat 20584056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 817 - 912
Target Start/End: Original strand, 2027438 - 2027534
Alignment:
Q  817 atcaaatagtttcaccatt-tcaatatttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatatccaacatttaacaattca 912  Q
    |||| |||||||||||||| | || | || ||||||| ||||||| ||||| ||||||||||||||||  ||||||||||||||||| |||| |||||    
T  2027438 atcatatagtttcaccattctaaacaattatcatattccaagtaa-gagaacatacaacatctcatgacaaatatcatatccaacatataaccattca 2027534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 832 - 912
Target Start/End: Complemental strand, 14252565 - 14252486
Alignment:
Q  832 catttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgataatatcatatccaacatttaacaattca 912  Q
    |||| |||||||||||||||  ||||||| ||||| |||||||| |||||| ||||||||||| |||| | |||| |||||    
T  14252565 cattacaatatttctcatataccaagtaa-gagaacatacaacacctcatgttaatatcatattcaacttataaccattca 14252486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 735 - 806
Target Start/End: Complemental strand, 14276205 - 14276135
Alignment:
Q  735 aatacatgatttgctcacattccaagtaaagaggaaaatacatcaccttaagatgaacatcacattcaacac 806  Q
    ||||||||| || | ||||||||||||||||| | ||||||| ||||||| ||| ||||||| |||||||||    
T  14276205 aatacatgagttccccacattccaagtaaagatg-aaatacaacaccttatgataaacatcatattcaacac 14276135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 817 - 898
Target Start/End: Complemental strand, 15442842 - 15442760
Alignment:
Q  817 atcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcatatccaa 898  Q
    |||| ||||||||||||||||||   |||||||||| ||||||| || ||||| ||||||||||||||| || |||||||||||    
T  15442842 atcatatagtttcaccatttcaagcattctcatattccaagtaatagggaaaa-acaacatctcatgataaacatcatatccaa 15442760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 817 - 898
Target Start/End: Complemental strand, 30263407 - 30263325
Alignment:
Q  817 atcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcatatccaa 898  Q
    |||| ||||||||||||||||||   |||||||||| ||||||| || ||||| ||||||||||||||| || |||||||||||    
T  30263407 atcatatagtttcaccatttcaagcattctcatattccaagtaatagggaaaa-acaacatctcatgataaacatcatatccaa 30263325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 797 - 912
Target Start/End: Original strand, 7291717 - 7291830
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||  ||||||| ||||| ||||||||||| |||| || ||||||||    
T  7291717 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatatcccaagtaa-gagaacatacaacatcttatgacaaatatcatat 7291812  T
Q  895 ccaacatttaacaattca 912  Q
    ||||||| |||| |||||    
T  7291813 ccaacatataaccattca 7291830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 797 - 901
Target Start/End: Original strand, 11515093 - 11515193
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatatc 895  Q
    ||||||||| ||||||||||  || |||||||||||||| |||   |||||||||| ||||||| ||||| |||||||||||||||  || |||||||||    
T  11515093 cattcaaca-tcaactatca--catatagtttcaccatt-caaggattctcatattccaagtaa-gagaacatacaacatctcatggcaattatcatatc 11515187  T
Q  896 caacat 901  Q
    ||||||    
T  11515188 caacat 11515193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 12246624 - 12246662
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatg 223  Q
    ||||||||||||||||||||||||| || ||||||||||    
T  12246624 atgtatgcatgaacatatgactcaacaacaatgcatatg 12246662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 542 - 580
Target Start/End: Original strand, 12246624 - 12246662
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatg 580  Q
    ||||||||||||||||||||||||| || ||||||||||    
T  12246624 atgtatgcatgaacatatgactcaacaacaatgcatatg 12246662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 224; Significance: 1e-123; HSPs: 2)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 485 - 824
Target Start/End: Complemental strand, 2171 - 1835
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 584  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2171 catcatcaccaaa-tcatcacaaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 2073  T
Q  585 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaa 684  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||| | | ||||||||||||||||||||||| ||    
T  2072 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcacacctataattcatcaccgcatacataatcaataccatatcataat-aa 1974  T
Q  685 caatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagaggaaaatacatcacctta 784  Q
    ||||||||||||||||||||||||||||  || |  |  | |||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  1973 caatgtatatggactcaccaatatcatc-tcattcacataattcatatcaaatacatgatttgcttacattccaagtaaagaggaaaatacgtcacctta 1875  T
Q  785 agatgaacatcacattcaacactcaactatcaatcaaata 824  Q
    |||| |||||||||||| | | ||||||||||||| ||||    
T  1874 agataaacatcacattccatattcaactatcaatccaata 1835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342; HSP #2
Raw Score: 180; E-Value: 1e-96
Query Start/End: Original strand, 128 - 355
Target Start/End: Complemental strand, 2171 - 1946
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    ||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2171 catcatcaccaaa-tcatcacaaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 2073  T
Q  228 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaa 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||| | | ||||||||||||||||||||||| ||    
T  2072 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcacacctataattcatcaccgcatacataatcaataccatatcataat-aa 1974  T
Q  328 caatgtatatggactcaccaatatcatc 355  Q
    ||||||||||||||||||||||||||||    
T  1973 caatgtatatggactcaccaatatcatc 1946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 196; Significance: 1e-106; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 485 - 810
Target Start/End: Original strand, 29664878 - 29665202
Alignment:
Q  485 catcatcaccaaaatcatcaccaat-tggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcc 583  Q
    ||||||||||||||||||||||||| |||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29664878 catcatcaccaaaatcatcaccaatatggatacataaaaatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcc 29664977  T
Q  584 acacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataa 683  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| | |||||||||||| |||||||||| |    
T  29664978 acacaacaactctccatatcatcaccaatatttatttgcatttatgcaatcacacaaataattcatcaccacatacataatcaatactatatcataat-a 29665076  T
Q  684 acaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagaggaa-aatacatcacct 782  Q
    ||||||||| ||||||||||||||||||| |    || ||| || | |||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  29665077 acaatgtatgtggactcaccaatatcatctcattcatgtaa-ttgatatcaaatacatgatttgctcacattccaagtaaaaaggaagaatacatcacct 29665175  T
Q  783 taagatgaacatcacattcaacactcaa 810  Q
    | |||| ||| || ||||||||| ||||    
T  29665176 tgagat-aacttctcattcaacattcaa 29665202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 173; E-Value: 2e-92
Query Start/End: Original strand, 128 - 355
Target Start/End: Original strand, 29664878 - 29665105
Alignment:
Q  128 catcatcaccaaaatcatcaccaat-tggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcc 226  Q
    ||||||||||||||||||||||||| |||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29664878 catcatcaccaaaatcatcaccaatatggatacataaaaatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcc 29664977  T
Q  227 acacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataa 326  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| | |||||||||||| |||||||||| |    
T  29664978 acacaacaactctccatatcatcaccaatatttatttgcatttatgcaatcacacaaataattcatcaccacatacataatcaatactatatcataat-a 29665076  T
Q  327 acaatgtatatggactcaccaatatcatc 355  Q
    ||||||||| |||||||||||||||||||    
T  29665077 acaatgtatgtggactcaccaatatcatc 29665105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 172; E-Value: 6e-92
Query Start/End: Original strand, 485 - 712
Target Start/End: Complemental strand, 32278119 - 32277893
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 584  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32278119 catcatcaccaatatcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 32278020  T
Q  585 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaa 684  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||| |  |||||||||||||||| | ||||||||||| ||||||||||| ||    
T  32278019 cacaaccactcaccaaatcatcaccaatatttatttgcatttatgcaatcacatcaataattcatcaccacatacataatcaatatcatatcataat-aa 32277921  T
Q  685 caatgtatatggactcaccaatatcatc 712  Q
    ||||||||| ||||||||||||| ||||    
T  32277920 caatgtatacggactcaccaataccatc 32277893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 172; E-Value: 6e-92
Query Start/End: Original strand, 128 - 355
Target Start/End: Complemental strand, 32278119 - 32277893
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32278119 catcatcaccaatatcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 32278020  T
Q  228 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaa 327  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||| |  |||||||||||||||| | ||||||||||| ||||||||||| ||    
T  32278019 cacaaccactcaccaaatcatcaccaatatttatttgcatttatgcaatcacatcaataattcatcaccacatacataatcaatatcatatcataat-aa 32277921  T
Q  328 caatgtatatggactcaccaatatcatc 355  Q
    ||||||||| ||||||||||||| ||||    
T  32277920 caatgtatacggactcaccaataccatc 32277893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 602 - 833
Target Start/End: Complemental strand, 16301385 - 16301154
Alignment:
Q  602 tcatcacca-atatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaatacca--tatcataataaacaatgtatatggac 698  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||||||| | ||||||||||||||  ||||||| ||| |||||||||| |||    
T  16301385 tcatcaccacatatttatttgcatttatgcaatcacaccaataattcatcaccacatacataatcaataccaaatatcatattaa-caatgtatatagac 16301287  T
Q  699 tcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagaggaaaatacatcaccttaagatgaacatcaca 798  Q
    |||||||||||||||||   |  |||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||| |||||||| |||||||||    
T  16301286 tcaccaatatcatcaccttcacataatttcacatcaattacatgatttgctcacattccaagtaaagaggaagatacgtcatcttaagataaacatcaca 16301187  T
Q  799 ttcaacactcaactatcaatcaaatagtttcacca 833  Q
    ||| | | ||||||||||  || ||||||||||||    
T  16301186 ttccatattcaactatca--catatagtttcacca 16301154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 669 - 824
Target Start/End: Complemental strand, 35010591 - 35010436
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagagg 768  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||   |  ||||||||||||||||||||||||||||||| |||||||| ||||||    
T  35010591 accatatcataataaacaatgtatatggattcaccaatatcattaccttcacataatttcacatcaaatacatgatttgctcactttccaagtcaagagg 35010492  T
Q  769 aaaatacatcaccttaagatgaacatcacattcaacactcaactatcaatcaaata 824  Q
    |||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||    
T  35010491 aaaatacatcaccttaagataaacatcacattcaaaactcaactaacaatcaaata 35010436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 669 - 819
Target Start/End: Original strand, 27739899 - 27740049
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagagg 768  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||   |  |||||||||||||||||||||||||||||||||||||| ||||||||    
T  27739899 accatattataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacatcaaatacatgatttgctcacattccaaataaagagg 27739998  T
Q  769 aaaatacatcaccttaagatgaacatcacattcaacactcaactatcaatc 819  Q
    ||||||  |||||||||||| |||||||||||||| |||||||||||||||    
T  27739999 aaaatatgtcaccttaagataaacatcacattcaatactcaactatcaatc 27740049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 669 - 824
Target Start/End: Complemental strand, 14627327 - 14627172
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagagg 768  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||   |  |||||||||||||||||||||||||||  || |||||||| ||||||    
T  14627327 accatatcataataaacaatatatatggattcaccaatatcatcaccttcacataatttcacatcaaatacatgatttgcctactttccaagtcaagagg 14627228  T
Q  769 aaaatacatcaccttaagatgaacatcacattcaacactcaactatcaatcaaata 824  Q
    |||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||    
T  14627227 aaaatacatcaccttaagataaacattacattcaacactcaactaacaatcaaata 14627172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 669 - 824
Target Start/End: Original strand, 222009 - 222165
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagagg 768  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||  ||  ||||||||||||| ||| ||||||||  ||| |||||||| ||||||    
T  222009 accatatcataataaacaatgtatatggattcaccaacatcatcacctttacataatttcacatcagatatatgatttgtccactttccaagtcaagagg 222108  T
Q  769 -aaaatacatcaccttaagatgaacatcacattcaacactcaactatcaatcaaata 824  Q
     |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  222109 aaaaatacatcaccttaagataaacatcacattcaacactcaactaacaatcaaata 222165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 671 - 824
Target Start/End: Original strand, 14151366 - 14151519
Alignment:
Q  671 catatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagaggaa 770  Q
    |||||||| ||||||||||||| | || ||||||||||||||| |   |  ||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  14151366 catatcatcataaacaatgtatgtagattcaccaatatcatcatcttcacataattccacatcaaatacatgatttgctcacattccaagcaaagaggaa 14151465  T
Q  771 aatacatcaccttaagatgaacatcacattcaacactcaactatcaatcaaata 824  Q
    |||||||||||||||||| |||||||||||| ||||| |||||||| |||||||    
T  14151466 aatacatcaccttaagataaacatcacattccacacttaactatcattcaaata 14151519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 669 - 810
Target Start/End: Original strand, 1554902 - 1555042
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagagg 768  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||   |  |||||||||||||  |||||||||||||||||||||||||||| |||    
T  1554902 accatatcataataaacaatgtatatggattcaccaaaatcatcaccttcacataatttcacatcacttacatgatttgctcacattccaagtaaaaagg 1555001  T
Q  769 aaaatacatcaccttaagatgaacatcacattcaacactcaa 810  Q
    ||||||||||||||| |||| ||| || ||||||||| ||||    
T  1555002 aaaatacatcaccttgagat-aacttctcattcaacattcaa 1555042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 185 - 355
Target Start/End: Original strand, 19628056 - 19628224
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaa-caactcaccatatcatcaccaatatttatttgcatttatgcaatcatacga 283  Q
    |||||||||| |||||||  ||||| || ||| ||||||| || |||| ||| |||||||||  ||||||||||| | ||||||||||||||||| || |    
T  19628056 atgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatatt-acttgcatttatgcaatcacacca 19628154  T
Q  284 ataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcatc 355  Q
    |||||||||||||| |  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19628155 ataattcatcaccaata-cataatcaataccatatcataataa-caatgtatatggactcaccaatatcatc 19628224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 542 - 712
Target Start/End: Original strand, 19628056 - 19628224
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaa-caactcaccatatcatcaccaatatttatttgcatttatgcaatcatacga 640  Q
    |||||||||| |||||||  ||||| || ||| ||||||| || |||| ||| |||||||||  ||||||||||| | ||||||||||||||||| || |    
T  19628056 atgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatatt-acttgcatttatgcaatcacacca 19628154  T
Q  641 ataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcatc 712  Q
    |||||||||||||| |  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19628155 ataattcatcaccaata-cataatcaataccatatcataataa-caatgtatatggactcaccaatatcatc 19628224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 245 - 403
Target Start/End: Complemental strand, 16301385 - 16301225
Alignment:
Q  245 tcatcacca-atatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaatacc--atatcataataaacaatgtatatggac 341  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||||||| | |||||||||||||  ||||||| || |||||||||||| |||    
T  16301385 tcatcaccacatatttatttgcatttatgcaatcacaccaataattcatcaccacatacataatcaataccaaatatcat-attaacaatgtatatagac 16301287  T
Q  342 tcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaag 403  Q
    |||||||||||||||||   |  |||||||||||||| | ||||||||| ||  ||||||||    
T  16301286 tcaccaatatcatcaccttcacataatttcacatcaattacatgatttgctcacattccaag 16301225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 185 - 258
Target Start/End: Original strand, 27739744 - 27739817
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaatatt 258  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||    
T  27739744 atgtatgcatgaacatatgactcaataacaatgcatatgttcacacaacaactcaccatatcctcaccaatatt 27739817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 542 - 615
Target Start/End: Original strand, 27739744 - 27739817
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaatatt 615  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||    
T  27739744 atgtatgcatgaacatatgactcaataacaatgcatatgttcacacaacaactcaccatatcctcaccaatatt 27739817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 489 - 654
Target Start/End: Complemental strand, 16301583 - 16301421
Alignment:
Q  489 atcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacaca 588  Q
    |||||||| |||||||||| ||||||||||||| ||||||| |  || ||   || |||||||||| ||||||||||| ||    |||||||| |||| |    
T  16301583 atcaccaatatcatcaccatttggatatataaaaatatccgtctccatcagtcatatatgcatgaatatatgactcaacaac---gcatatgttcacata 16301487  T
Q  589 acaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 654  Q
    ||||||||||| ||  |||| ||||||| |||||||||||||||||| || |||||||||||||||    
T  16301486 acaactcaccaaattctcacaaatatttgtttgcatttatgcaatcacaccaataattcatcacca 16301421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 132 - 297
Target Start/End: Complemental strand, 16301583 - 16301421
Alignment:
Q  132 atcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacaca 231  Q
    |||||||| |||||||||| ||||||||||||| ||||| |||  || ||   || |||||||||| ||||||||||| ||    |||||||| |||| |    
T  16301583 atcaccaatatcatcaccatttggatatataaaaatatccgtctccatcagtcatatatgcatgaatatatgactcaacaac---gcatatgttcacata 16301487  T
Q  232 acaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 297  Q
    ||||||||||| ||  |||| ||||||| |||||||||||||||||| || |||||||||||||||    
T  16301486 acaactcaccaaattctcacaaatatttgtttgcatttatgcaatcacaccaataattcatcacca 16301421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 817 - 913
Target Start/End: Original strand, 22847027 - 22847125
Alignment:
Q  817 atcaaatagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattcat 913  Q
    |||| |||||||||||| | ||| |||||||||||||  ||||||||||||||||||||| || ||||| ||||||||||||||||| |||||||||||    
T  22847027 atcatatagtttcaccactccaaatatttctcatattcaaagtaaagagaaaatacaacaacttatgataaatatcatatccaacatataacaattcat 22847125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 145 - 245
Target Start/End: Complemental strand, 35010881 - 35010780
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcaccat 243  Q
    |||||| ||||||||||||| |||||||||  || ||   ||||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||    
T  35010881 tcaccatttggatatataaaaatatctgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcaccat 35010782  T
Q  244 at 245  Q
    ||    
T  35010781 at 35010780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 817 - 914
Target Start/End: Complemental strand, 35137272 - 35137175
Alignment:
Q  817 atcaaatagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatatccaacatttaacaattcatc 914  Q
    |||| |||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||| ||||| |||||||| |||||| | ||||||||||    
T  35137272 atcatatagtttcaccatttcaaatatttctcatattccaagtaa-gagaaaatacaacatctcaggataagtatcatattcaacatct-acaattcatc 35137175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 312 - 390
Target Start/End: Complemental strand, 14627327 - 14627249
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttg 390  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||   |  |||||||||||||||| |||||||||    
T  14627327 accatatcataataaacaatatatatggattcaccaatatcatcaccttcacataatttcacatcaaatacatgatttg 14627249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 312 - 390
Target Start/End: Original strand, 27739899 - 27739977
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttg 390  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||   |  |||||||||||||||| |||||||||    
T  27739899 accatattataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacatcaaatacatgatttg 27739977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 312 - 390
Target Start/End: Complemental strand, 35010591 - 35010513
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttg 390  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||   |  |||||||||||||||| |||||||||    
T  35010591 accatatcataataaacaatgtatatggattcaccaatatcattaccttcacataatttcacatcaaatacatgatttg 35010513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 602 - 655
Target Start/End: Complemental strand, 16301429 - 16301376
Alignment:
Q  602 tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccac 655  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  16301429 tcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcaccac 16301376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 245 - 298
Target Start/End: Complemental strand, 16301429 - 16301376
Alignment:
Q  245 tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccac 298  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  16301429 tcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcaccac 16301376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 817 - 895
Target Start/End: Complemental strand, 16889024 - 16888945
Alignment:
Q  817 atcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatatc 895  Q
    |||| |||||||||||| |||||| |||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||    
T  16889024 atcatatagtttcaccaattcaattatttctcatatttcaagtaa-gagaaaatacaacatctcatgataattatcatatc 16888945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 312 - 391
Target Start/End: Original strand, 222009 - 222088
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgt 391  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||  ||  ||||||||||||| ||  |||||||||    
T  222009 accatatcataataaacaatgtatatggattcaccaacatcatcacctttacataatttcacatcagatatatgatttgt 222088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 254
Target Start/End: Original strand, 14151202 - 14151272
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcaccatatcatcaccaa 254  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||||  |||||||    
T  14151202 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcaccatattctcaccaa 14151272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 542 - 611
Target Start/End: Original strand, 14151202 - 14151272
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcaccatatcatcaccaa 611  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||||  |||||||    
T  14151202 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcaccatattctcaccaa 14151272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 832 - 914
Target Start/End: Complemental strand, 32277888 - 32277807
Alignment:
Q  832 catttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgataatatcatatccaacatttaacaattcatc 914  Q
    |||| |||||||||||||||  ||||||| ||||| |||||||| |||||| |||||||||||||||||| ||| ||||||||    
T  32277888 cattgcaatatttctcatataccaagtaa-gagaacatacaacacctcatgttaatatcatatccaacatataataattcatc 32277807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 542 - 602
Target Start/End: Complemental strand, 35010841 - 35010780
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcaccatat 602  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||||    
T  35010841 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcaccatat 35010780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 312 - 403
Target Start/End: Original strand, 1554902 - 1554993
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaag 403  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||   |  |||||||||||||  | ||||||||| ||  ||||||||    
T  1554902 accatatcataataaacaatgtatatggattcaccaaaatcatcaccttcacataatttcacatcacttacatgatttgctcacattccaag 1554993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 797 - 913
Target Start/End: Complemental strand, 14627907 - 14627793
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaatat-ttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| ||| |  |||||||||| ||||||| ||||| |||||||||||||||| || ||||||||    
T  14627907 cattcaaca-tcaactat--atcatatagtttcaccattccaaaacattctcatattccaagtaa-gagaacatacaacatctcatgacaaatatcatat 14627812  T
Q  895 ccaacatttaacaattcat 913  Q
    ||||||| |||| ||||||    
T  14627811 ccaacatataaccattcat 14627793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 797 - 901
Target Start/End: Complemental strand, 18825058 - 18824956
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatat 894  Q
    ||||||||| ||||||||||  || ||||||||||||||||||  | |||||||||| ||||||| ||||| ||||||||||||||||  ||||||||||    
T  18825058 cattcaaca-tcaactatca--catatagtttcaccatttcaaacaattctcatattccaagtaa-gagaacatacaacatctcatgacaaatatcatat 18824963  T
Q  895 ccaacat 901  Q
    |||||||    
T  18824962 ccaacat 18824956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 843 - 913
Target Start/End: Original strand, 34965854 - 34965925
Alignment:
Q  843 ttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattcat 913  Q
    |||||||||| ||||||||||||||||| |||| || ||||| |||||||||| |||||| |||||||||||    
T  34965854 ttctcatattccaagtaaagagaaaataaaacaccttatgataaatatcatattcaacatctaacaattcat 34965925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 822 - 901
Target Start/End: Original strand, 4989784 - 4989864
Alignment:
Q  822 atagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatatccaacat 901  Q
    ||||||||||||||||||  | |||||||||| ||||||| ||||| ||||||||||||||||  |||||||||||||||||    
T  4989784 atagtttcaccatttcaaacaattctcatattccaagtaa-gagaacatacaacatctcatgacaaatatcatatccaacat 4989864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 817 - 912
Target Start/End: Complemental strand, 13622393 - 13622297
Alignment:
Q  817 atcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatatccaacatttaacaattca 912  Q
    |||| |||||||||||||| |||  | |||||||||| ||||||| ||||| |||||||||||||||| || ||||||||||||||| |||| |||||    
T  13622393 atcatatagtttcaccattccaaacaattctcatattccaagtaa-gagaacatacaacatctcatgacaaatatcatatccaacatataaccattca 13622297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 843 - 913
Target Start/End: Complemental strand, 15736434 - 15736364
Alignment:
Q  843 ttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatatccaacatttaacaattcat 913  Q
    |||||||||| ||||||| ||||| |||||||||||||||| || ||||||||||||||| |||| ||||||    
T  15736434 ttctcatattccaagtaa-gagaacatacaacatctcatgacaaatatcatatccaacatataaccattcat 15736364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 797 - 913
Target Start/End: Complemental strand, 18004270 - 18004156
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||| ||||||| ||||| |||||| ||||||||| || ||||||||    
T  18004270 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatattccaagtaa-gagaacatacaaaatctcatgacaaatatcatat 18004175  T
Q  895 ccaacatttaacaattcat 913  Q
    ||||||| |||| ||||||    
T  18004174 ccaacatataaccattcat 18004156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 843 - 913
Target Start/End: Original strand, 19853122 - 19853192
Alignment:
Q  843 ttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatatccaacatttaacaattcat 913  Q
    |||||||||| ||||||| |||||||||||||| |  ||||||| |||||||||||||| ||||||||||||    
T  19853122 ttctcatatttcaagtaa-gagaaaatacaacaccctatgataaatatcatatccaacacttaacaattcat 19853192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 735 - 806
Target Start/End: Complemental strand, 22594579 - 22594509
Alignment:
Q  735 aatacatgatttgctcacattccaagtaaagaggaaaatacatcaccttaagatgaacatcacattcaacac 806  Q
    ||||||||| || | ||||||||||||||||||| ||||||| ||||||| ||||||||||| || ||||||    
T  22594579 aatacatgaatttcccacattccaagtaaagagg-aaatacaacaccttatgatgaacatcatatccaacac 22594509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 817 - 894
Target Start/End: Original strand, 33323659 - 33323737
Alignment:
Q  817 atcaaatagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatat 894  Q
    |||| ||||||||||| |||||| ||||||||||||| ||||| ||||| ||||||||||||||| ||||| ||||||||    
T  33323659 atcatatagtttcaccgtttcaaatatttctcatattccaagt-aagaggaaatacaacatctcaagataagtatcatat 33323737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 797 - 912
Target Start/End: Original strand, 16230447 - 16230560
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||| ||||||| ||||| ||||||||| |||||| || ||||||||    
T  16230447 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatattccaagtaa-gagaacatacaacatttcatgacaaatatcatat 16230542  T
Q  895 ccaacatttaacaattca 912  Q
    ||||||| |||| |||||    
T  16230543 ccaacatataaccattca 16230560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 798 - 901
Target Start/End: Complemental strand, 18843117 - 18843016
Alignment:
Q  798 attcaacactcaactatcaatcaaatagtttcaccatttc-aatatttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatatc 895  Q
    |||||||| ||||||||||  || |||||||||||||||| || | |||||||||| ||||| ||||||| ||||||||| ||||||  |||||||||||    
T  18843117 attcaaca-tcaactatca--catatagtttcaccatttcaaacaattctcatattccaagt-aagagaacatacaacatatcatgacaaatatcatatc 18843022  T
Q  896 caacat 901  Q
    ||||||    
T  18843021 caacat 18843016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 797 - 912
Target Start/End: Original strand, 25174419 - 25174532
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||  ||||||| ||||| ||||||||||||||||  ||||||||||    
T  25174419 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatatcccaagtaa-gagaacatacaacatctcatgacaaatatcatat 25174514  T
Q  895 ccaacatttaacaattca 912  Q
    ||||||| |||| |||||    
T  25174515 ccaacatataaccattca 25174532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 822 - 891
Target Start/End: Original strand, 25918580 - 25918648
Alignment:
Q  822 atagtttcaccatttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgataatatca 891  Q
    ||||||||||||||  ||||||||||||||| ||| |  |||||| ||||||||||| ||||||||||||    
T  25918580 atagtttcaccattcaaatatttctcatattccaa-tttagagaacatacaacatcttatgataatatca 25918648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 797 - 901
Target Start/End: Complemental strand, 27655384 - 27655282
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||  ||||||| ||||| ||||||||||||||||  ||||||||||    
T  27655384 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatatcccaagtaa-gagaacatacaacatctcatgacaaatatcatat 27655289  T
Q  895 ccaacat 901  Q
    |||||||    
T  27655288 ccaacat 27655282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 817 - 906
Target Start/End: Complemental strand, 33315862 - 33315772
Alignment:
Q  817 atcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcatatccaacatttaac 906  Q
    |||| ||||||||||||||||||   |||||||||| ||||||| || ||||| | ||||||||||||| |||||||||| |||||| ||||    
T  33315862 atcatatagtttcaccatttcaaccattctcatattccaagtaatagggaaaa-aaaacatctcatgataaatatcatattcaacatataac 33315772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 242
Target Start/End: Original strand, 19627927 - 19628025
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 242  Q
    |||||| ||||||||||||| ||||| |||  || ||   || ||||||||||||||||||| || || ||| ||||||| ||||| ||||||||||||    
T  19627927 tcaccatttggatatataaaaatatccgtctccatcagtcatatatgcatgaacatatgacttaacaacaatacatatgttcacacaaacaactcacca 19628025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 822 - 898
Target Start/End: Original strand, 23976456 - 23976533
Alignment:
Q  822 atagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatatccaa 898  Q
    |||||||||||||| |||  | |||||||||| ||||||| ||||| ||||||||||||||||  ||||||||||||||    
T  23976456 atagtttcaccattccaaacaattctcatattccaagtaa-gagaacatacaacatctcatgacaaatatcatatccaa 23976533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 189; Significance: 1e-102; HSPs: 3)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 141 - 357
Target Start/End: Original strand, 16611 - 16827
Alignment:
Q  141 atcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcac 240  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16611 atcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcac 16710  T
Q  241 catatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatgga 340  Q
    |||||||||||||||||||||||||||||||| ||||| || |||||||||||||||| | || ||||||||||||||||||||||||||||||||||||    
T  16711 catatcatcaccaatatttatttgcatttatgaaatcacaccaataattcatcaccacattcacaatcaataccatatcataataaacaatgtatatgga 16810  T
Q  341 ctcaccaatatcatcac 357  Q
    |||||||||||||||||    
T  16811 ctcaccaatatcatcac 16827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 498 - 714
Target Start/End: Original strand, 16611 - 16827
Alignment:
Q  498 atcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcac 597  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16611 atcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcac 16710  T
Q  598 catatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatgga 697  Q
    |||||||||||||||||||||||||||||||| ||||| || |||||||||||||||| | || ||||||||||||||||||||||||||||||||||||    
T  16711 catatcatcaccaatatttatttgcatttatgaaatcacaccaataattcatcaccacattcacaatcaataccatatcataataaacaatgtatatgga 16810  T
Q  698 ctcaccaatatcatcac 714  Q
    |||||||||||||||||    
T  16811 ctcaccaatatcatcac 16827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 832 - 914
Target Start/End: Original strand, 16830 - 16911
Alignment:
Q  832 catttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgataatatcatatccaacatttaacaattcatc 914  Q
    |||| |||||||||||||||  ||||||| ||||| |||||||| |||||| |||||||||||||||||| | | ||||||||    
T  16830 cattacaatatttctcatataccaagtaa-gagaacatacaacacctcatgttaatatcatatccaacatatcataattcatc 16911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 185; Significance: 1e-99; HSPs: 3)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 485 - 712
Target Start/End: Complemental strand, 35748 - 35521
Alignment:
Q  485 catcatcaccaaaatcatcaccaatt-ggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcc 583  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  35748 catcatcaccaaaatcatcaccaatttggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgacttaataataatgcatatgtcc 35649  T
Q  584 acacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataa 683  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| || |||||||||||||||||||||| |    
T  35648 acacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcacaccaacaattcatcaccacatggataatcaataccatatcataat-a 35550  T
Q  684 acaatgtatatggactcaccaatatcatc 712  Q
    |||||||||||||||||||||||||||||    
T  35549 acaatgtatatggactcaccaatatcatc 35521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 128 - 355
Target Start/End: Complemental strand, 35748 - 35521
Alignment:
Q  128 catcatcaccaaaatcatcaccaatt-ggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcc 226  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  35748 catcatcaccaaaatcatcaccaatttggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgacttaataataatgcatatgtcc 35649  T
Q  227 acacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataa 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||| || |||||||||||||||||||||| |    
T  35648 acacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcacaccaacaattcatcaccacatggataatcaataccatatcataat-a 35550  T
Q  327 acaatgtatatggactcaccaatatcatc 355  Q
    |||||||||||||||||||||||||||||    
T  35549 acaatgtatatggactcaccaatatcatc 35521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 832 - 914
Target Start/End: Complemental strand, 35516 - 35435
Alignment:
Q  832 catttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgataatatcatatccaacatttaacaattcatc 914  Q
    |||| |||||||||||||||  ||||||| ||||| |||||||| |||||| |||||||||||||||||| | | ||||||||    
T  35516 cattacaatatttctcatataccaagtaa-gagaacatacaacacctcatgttaatatcatatccaacatatcataattcatc 35435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 185; Significance: 1e-99; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 498 - 714
Target Start/End: Complemental strand, 14503084 - 14502868
Alignment:
Q  498 atcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcac 597  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14503084 atcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcac 14502985  T
Q  598 catatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatgga 697  Q
    || ||||||||||||||||||||||| ||||||||||| || |||||||||||||||| | || ||||||||||||||||||||||||||||||||||||    
T  14502984 caaatcatcaccaatatttatttgcagttatgcaatcacaccaataattcatcaccacattcacaatcaataccatatcataataaacaatgtatatgga 14502885  T
Q  698 ctcaccaatatcatcac 714  Q
    |||||||||||||||||    
T  14502884 ctcaccaatatcatcac 14502868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 141 - 357
Target Start/End: Complemental strand, 14503084 - 14502868
Alignment:
Q  141 atcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcac 240  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14503084 atcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcac 14502985  T
Q  241 catatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatgga 340  Q
    || ||||||||||||||||||||||| ||||||||||| || |||||||||||||||| | || ||||||||||||||||||||||||||||||||||||    
T  14502984 caaatcatcaccaatatttatttgcagttatgcaatcacaccaataattcatcaccacattcacaatcaataccatatcataataaacaatgtatatgga 14502885  T
Q  341 ctcaccaatatcatcac 357  Q
    |||||||||||||||||    
T  14502884 ctcaccaatatcatcac 14502868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 182; E-Value: 7e-98
Query Start/End: Original strand, 513 - 810
Target Start/End: Complemental strand, 23271628 - 23271333
Alignment:
Q  513 atatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaat 612  Q
    ||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23271628 atatataaaaatatccgtcatcaccaaaaatgtatgcatgaacatatgactcaataacaatgcatatgtccacacaacaactcaccatatcatcaccaat 23271529  T
Q  613 atttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcatc 712  Q
    | ||||||||||||||||||| | || |||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||| |||||||||||| |    
T  23271528 a-ttatttgcatttatgcaattacaccaataattcatcaccacatacataatcaacaccatatcataataaacaatgtatatggattcaccaatatca-c 23271431  T
Q  713 accaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagaggaaaatacatcaccttaagatgaacatcacattcaacactcaa 810  Q
     ||   |  |||| ||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||| ||| |||||||||||| ||||    
T  23271430 cccttcacataatctcatatcaaatacatgatttgctcacattccaggtaaagaggaaagtacatcaccttgagataaacctcacattcaacattcaa 23271333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 485 - 712
Target Start/End: Complemental strand, 32462034 - 32461807
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 584  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  32462034 catcatcaccaaaatcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatggacatatgactcaataataatgcatatgtcca 32461935  T
Q  585 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaata--ccatatcataata 682  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||| | ||||||||| |   |||||||| ||     
T  32461934 cacaacaactcatcatatcatcaccaatatttatttgcatttatgcaatcaaaccaataattcatcaccacatacataatcaacaatacatatcat-att 32461836  T
Q  683 aacaatgtatatggactcaccaatatcatc 712  Q
    ||||||| ||||||| ||||||||||||||    
T  32461835 aacaatg-atatggattcaccaatatcatc 32461807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 128 - 355
Target Start/End: Complemental strand, 32462034 - 32461807
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  32462034 catcatcaccaaaatcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatggacatatgactcaataataatgcatatgtcca 32461935  T
Q  228 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaata--ccatatcataata 325  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||| | ||||||||| |   |||||||| ||     
T  32461934 cacaacaactcatcatatcatcaccaatatttatttgcatttatgcaatcaaaccaataattcatcaccacatacataatcaacaatacatatcat-att 32461836  T
Q  326 aacaatgtatatggactcaccaatatcatc 355  Q
    ||||||| ||||||| ||||||||||||||    
T  32461835 aacaatg-atatggattcaccaatatcatc 32461807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 155; E-Value: 9e-82
Query Start/End: Original strand, 128 - 355
Target Start/End: Original strand, 9793988 - 9794229
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9793988 catcatcaccaaaatcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 9794087  T
Q  228 cacaacaactcaccata--------------tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaatac 313  Q
    ||||||||||||||| |              ||||||||||| ||||||||||||||||| |||| || ||||||||||||| || | || |||||||||    
T  9794088 cacaacaactcaccaaaacatcaccaataattcatcaccaatttttatttgcatttatgcgatcacaccaataattcatcactacattcacaatcaatac 9794187  T
Q  314 catatcataataaacaatgtatatggactcaccaatatcatc 355  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  9794188 catatcataataaacaatgtatatggactcaccaatatcatc 9794229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 155; E-Value: 9e-82
Query Start/End: Original strand, 485 - 712
Target Start/End: Original strand, 9793988 - 9794229
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 584  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9793988 catcatcaccaaaatcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 9794087  T
Q  585 cacaacaactcaccata--------------tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaatac 670  Q
    ||||||||||||||| |              ||||||||||| ||||||||||||||||| |||| || ||||||||||||| || | || |||||||||    
T  9794088 cacaacaactcaccaaaacatcaccaataattcatcaccaatttttatttgcatttatgcgatcacaccaataattcatcactacattcacaatcaatac 9794187  T
Q  671 catatcataataaacaatgtatatggactcaccaatatcatc 712  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  9794188 catatcataataaacaatgtatatggactcaccaatatcatc 9794229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 156 - 353
Target Start/End: Complemental strand, 23271628 - 23271432
Alignment:
Q  156 atatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaat 255  Q
    ||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23271628 atatataaaaatatccgtcatcaccaaaaatgtatgcatgaacatatgactcaataacaatgcatatgtccacacaacaactcaccatatcatcaccaat 23271529  T
Q  256 atttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaatatca 353  Q
    | ||||||||||||||||||| | || |||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  23271528 a-ttatttgcatttatgcaattacaccaataattcatcaccacatacataatcaacaccatatcataataaacaatgtatatggattcaccaatatca 23271432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 150 - 250
Target Start/End: Original strand, 8043708 - 8043808
Alignment:
Q  150 aattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatc 249  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8043708 aattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaatattaatgcatatgtccacacaacaactcaccatatcatc 8043807  T
Q  250 a 250  Q
    |    
T  8043808 a 8043808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 507 - 607
Target Start/End: Original strand, 8043708 - 8043808
Alignment:
Q  507 aattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatc 606  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8043708 aattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaatattaatgcatatgtccacacaacaactcaccatatcatc 8043807  T
Q  607 a 607  Q
    |    
T  8043808 a 8043808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 669 - 821
Target Start/End: Original strand, 14910986 - 14911138
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagagg 768  Q
    |||| ||||||||||||||||||||| ||  ||||||||||||||||  ||  ||||||||||||| ||| ||||||||| ||| |||||||| ||||||    
T  14910986 accaaatcataataaacaatgtatatcgatacaccaatatcatcacctttacataatttcacatcagatatatgatttgcccactttccaagtcaagagg 14911085  T
Q  769 aaaatacatcaccttaagatgaacatcacattcaacactcaactatcaatcaa 821  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  14911086 aaaatacatcaccttaagataaacatcacattcaacactcatctatcaatcaa 14911138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 669 - 816
Target Start/End: Complemental strand, 55378011 - 55377864
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagagg 768  Q
    |||||||||||||||| ||||||||||||  ||||||||||||||||   |  |||||||||||||||||||||||||||||||||||||||||||||||    
T  55378011 accatatcataataaataatgtatatggatccaccaatatcatcaccttcacataatttcacatcaaatacatgatttgctcacattccaagtaaagagg 55377912  T
Q  769 aaaatacatcaccttaagatgaacatcacattcaacactcaactatca 816  Q
    ||||||| ||| |||||||| |||||||||||| | | ||||||||||    
T  55377911 aaaatacgtcatcttaagataaacatcacattccatattcaactatca 55377864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 602 - 712
Target Start/End: Complemental strand, 19698845 - 19698737
Alignment:
Q  602 tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactca 701  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||  | ||||||||||||||||||||||| |||||||||||||||||||    
T  19698845 tcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca-atacataatcaataccatatcataat-aacaatgtatatggactca 19698748  T
Q  702 ccaatatcatc 712  Q
    |||||||||||    
T  19698747 ccaatatcatc 19698737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 245 - 355
Target Start/End: Complemental strand, 19698845 - 19698737
Alignment:
Q  245 tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactca 344  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||  | ||||||||||||||||||||||| |||||||||||||||||||    
T  19698845 tcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca-atacataatcaataccatatcataat-aacaatgtatatggactca 19698748  T
Q  345 ccaatatcatc 355  Q
    |||||||||||    
T  19698747 ccaatatcatc 19698737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 602 - 712
Target Start/End: Complemental strand, 19709430 - 19709322
Alignment:
Q  602 tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactca 701  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||  | ||||||||||||||||||||||| |||||||||||||||||||    
T  19709430 tcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca-atacataatcaataccatatcataat-aacaatgtatatggactca 19709333  T
Q  702 ccaatatcatc 712  Q
    |||||||||||    
T  19709332 ccaatatcatc 19709322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 245 - 355
Target Start/End: Complemental strand, 19709430 - 19709322
Alignment:
Q  245 tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactca 344  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||  | ||||||||||||||||||||||| |||||||||||||||||||    
T  19709430 tcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca-atacataatcaataccatatcataat-aacaatgtatatggactca 19709333  T
Q  345 ccaatatcatc 355  Q
    |||||||||||    
T  19709332 ccaatatcatc 19709322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 817 - 913
Target Start/End: Complemental strand, 15014551 - 15014453
Alignment:
Q  817 atcaaatagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattcat 913  Q
    |||| |||||||||||| | ||| ||||||||||||| |||||||||||||||||||||| || ||||| ||||||||||||||||| |||||||||||    
T  15014551 atcatatagtttcaccactccaaatatttctcatattccaagtaaagagaaaatacaacaacttatgataaatatcatatccaacatataacaattcat 15014453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 498 - 615
Target Start/End: Original strand, 22737247 - 22737364
Alignment:
Q  498 atcatcaccaat-tggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactca 596  Q
    |||||||||||| |||||||||||| |||||||||| || ||   ||||||||||||||||||||||||| || ||||||||||| | ||||||||||||    
T  22737247 atcatcaccaatatggatatataaa-atatccgccaccatcaggcatgtatgcatgaacatatgactcaacaacaatgcatatgttcccacaacaactca 22737345  T
Q  597 ccatatcatcaccaatatt 615  Q
    ||||||   ||||||||||    
T  22737346 ccatattcacaccaatatt 22737364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 259 - 324
Target Start/End: Original strand, 8043861 - 8043926
Alignment:
Q  259 tatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataat 324  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||    
T  8043861 tatttgcatttatgcaatcacaccaataattcatcaccacttgcataatcaatatcatatcataat 8043926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 616 - 681
Target Start/End: Original strand, 8043861 - 8043926
Alignment:
Q  616 tatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataat 681  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||    
T  8043861 tatttgcatttatgcaatcacaccaataattcatcaccacttgcataatcaatatcatatcataat 8043926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 826 - 914
Target Start/End: Complemental strand, 7187188 - 7187098
Alignment:
Q  826 tttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattcatc 914  Q
    |||||||||||||| |||||||||| |||||| ||| ||||||| ||||||||| ||||| ||||||||||||||||| ||||||||||||    
T  7187188 tttcaccatttcaaatatttctcatgttacaaataacgagaaaacacaacatcttatgatcaatatcatatccaacatctaacaattcatc 7187098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 141 - 258
Target Start/End: Original strand, 22737247 - 22737364
Alignment:
Q  141 atcatcaccaat-tggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactca 239  Q
    |||||||||||| |||||||||||| ||||| | || || ||   ||||||||||||||||||||||||| || ||||||||||| | ||||||||||||    
T  22737247 atcatcaccaatatggatatataaa-atatccgccaccatcaggcatgtatgcatgaacatatgactcaacaacaatgcatatgttcccacaacaactca 22737345  T
Q  240 ccatatcatcaccaatatt 258  Q
    ||||||   ||||||||||    
T  22737346 ccatattcacaccaatatt 22737364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 8043802 - 8043863
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtat 190  Q
    ||||||| |||||||||||||||||||||||||||||||| | |||||||||||| ||||||    
T  8043802 atcatcatcaaaatcatcaccaattggatatataaacatacccgtcatcaccaaacatgtat 8043863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 486 - 547
Target Start/End: Original strand, 8043802 - 8043863
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtat 547  Q
    ||||||| |||||||||||||||||||||||||||||||| ||| |||||||||| ||||||    
T  8043802 atcatcatcaaaatcatcaccaattggatatataaacatacccgtcatcaccaaacatgtat 8043863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 602 - 654
Target Start/End: Complemental strand, 19698944 - 19698892
Alignment:
Q  602 tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 654  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  19698944 tcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca 19698892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 19698944 - 19698892
Alignment:
Q  245 tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 297  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  19698944 tcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca 19698892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 602 - 654
Target Start/End: Complemental strand, 19709529 - 19709477
Alignment:
Q  602 tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 654  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  19709529 tcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca 19709477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 19709529 - 19709477
Alignment:
Q  245 tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 297  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  19709529 tcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca 19709477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 503 - 599
Target Start/End: Complemental strand, 55378338 - 55378242
Alignment:
Q  503 caccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcacca 599  Q
    ||||| ||||||||||||| ||||||| || || ||   |||||||||||||| |||||||||| || ||||||||||| ||||||| |||||||||    
T  55378338 caccatttggatatataaaaatatccgtcaccatcagtcatgtatgcatgaacgtatgactcaacaacaatgcatatgttcacacaataactcacca 55378242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 146 - 242
Target Start/End: Complemental strand, 55378338 - 55378242
Alignment:
Q  146 caccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcacca 242  Q
    ||||| ||||||||||||| ||||| |||| || ||   |||||||||||||| |||||||||| || ||||||||||| ||||||| |||||||||    
T  55378338 caccatttggatatataaaaatatccgtcaccatcagtcatgtatgcatgaacgtatgactcaacaacaatgcatatgttcacacaataactcacca 55378242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 757 - 820
Target Start/End: Original strand, 7849123 - 7849186
Alignment:
Q  757 caagtaaagaggaaaatacatcaccttaagatgaacatcacattcaacactcaactatcaatca 820  Q
    |||| ||||||||||||||||||||||||||| ||||||  | |||||||||||||||||||||    
T  7849123 caagcaaagaggaaaatacatcaccttaagataaacatctaagtcaacactcaactatcaatca 7849186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 312 - 403
Target Start/End: Complemental strand, 55378011 - 55377920
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaag 403  Q
    |||||||||||||||| ||||||||||||  ||||||||||||||||   |  |||||||||||||||| ||||||||| ||  ||||||||    
T  55378011 accatatcataataaataatgtatatggatccaccaatatcatcaccttcacataatttcacatcaaatacatgatttgctcacattccaag 55377920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 250
Target Start/End: Original strand, 14570043 - 14570109
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcaccatatcatca 250  Q
    ||||||||||||||||||||||||| || ||||||||||||||||| ||||| |||||| |||||||    
T  14570043 atgtatgcatgaacatatgactcaacaacaatgcatatgtccacacaaacaattcaccacatcatca 14570109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 542 - 607
Target Start/End: Original strand, 14570043 - 14570109
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcaccatatcatca 607  Q
    ||||||||||||||||||||||||| || ||||||||||||||||| ||||| |||||| |||||||    
T  14570043 atgtatgcatgaacatatgactcaacaacaatgcatatgtccacacaaacaattcaccacatcatca 14570109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 542 - 654
Target Start/End: Complemental strand, 19699048 - 19698936
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaa-caactcaccatatcatcaccaatatttatttgcatttatgcaatcatacga 640  Q
    |||||||||| |||||||  ||||| || ||| ||||||| || |||| ||| |||||||||  ||||||||||| | ||||||||||||||||| || |    
T  19699048 atgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatatt-acttgcatttatgcaatcacacca 19698950  T
Q  641 ataattcatcacca 654  Q
    ||||||||||||||    
T  19698949 ataattcatcacca 19698936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 297
Target Start/End: Complemental strand, 19699048 - 19698936
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaa-caactcaccatatcatcaccaatatttatttgcatttatgcaatcatacga 283  Q
    |||||||||| |||||||  ||||| || ||| ||||||| || |||| ||| |||||||||  ||||||||||| | ||||||||||||||||| || |    
T  19699048 atgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatatt-acttgcatttatgcaatcacacca 19698950  T
Q  284 ataattcatcacca 297  Q
    ||||||||||||||    
T  19698949 ataattcatcacca 19698936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 542 - 654
Target Start/End: Complemental strand, 19709633 - 19709521
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaa-caactcaccatatcatcaccaatatttatttgcatttatgcaatcatacga 640  Q
    |||||||||| |||||||  ||||| || ||| ||||||| || |||| ||| |||||||||  ||||||||||| | ||||||||||||||||| || |    
T  19709633 atgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatatt-acttgcatttatgcaatcacacca 19709535  T
Q  641 ataattcatcacca 654  Q
    ||||||||||||||    
T  19709534 ataattcatcacca 19709521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 297
Target Start/End: Complemental strand, 19709633 - 19709521
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaa-caactcaccatatcatcaccaatatttatttgcatttatgcaatcatacga 283  Q
    |||||||||| |||||||  ||||| || ||| ||||||| || |||| ||| |||||||||  ||||||||||| | ||||||||||||||||| || |    
T  19709633 atgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatatt-acttgcatttatgcaatcacacca 19709535  T
Q  284 ataattcatcacca 297  Q
    ||||||||||||||    
T  19709534 ataattcatcacca 19709521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 822 - 913
Target Start/End: Complemental strand, 10238702 - 10238610
Alignment:
Q  822 atagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgataatatcatatccaacatttaacaattcat 913  Q
    |||||| ||||||| ||| || || ||||||| |||||||||||||||| ||||| || ||||||||||||||| ||||| |||| |||||||    
T  10238702 atagttccaccattccaaatacttatcatattccaagtaaagagaaaatgcaacaccttatgataatatcatattcaacaattaaaaattcat 10238610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 797 - 901
Target Start/End: Original strand, 8373214 - 8373316
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatat 894  Q
    ||||||||| ||||||||||  || ||||||||||||||||||  | |||||||||| ||||||| ||||| ||||||||||||||||  ||||||||||    
T  8373214 cattcaaca-tcaactatca--catatagtttcaccatttcaaacaattctcatattccaagtaa-gagaacatacaacatctcatgacaaatatcatat 8373309  T
Q  895 ccaacat 901  Q
    |||||||    
T  8373310 ccaacat 8373316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 832 - 914
Target Start/End: Complemental strand, 14502865 - 14502784
Alignment:
Q  832 catttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgataatatcatatccaacatttaacaattcatc 914  Q
    |||| |||||||||||||||  ||||||| ||||| |||||||| |||||| |||||||||||||||||| | | ||||||||    
T  14502865 cattacaatatttctcatataccaagtaa-gagaacatacaacacctcatgttaatatcatatccaacatatcataattcatc 14502784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 502 - 599
Target Start/End: Complemental strand, 19699177 - 19699079
Alignment:
Q  502 tcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 599  Q
    |||||| ||||||||||||| ||||||| |  || ||   ||||||||||||||||||||||||| || ||| ||||||| ||||| ||||||||||||    
T  19699177 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatacatatgttcacacaaacaactcacca 19699079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 19699177 - 19699079
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 242  Q
    |||||| ||||||||||||| ||||| |||  || ||   ||||||||||||||||||||||||| || ||| ||||||| ||||| ||||||||||||    
T  19699177 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatacatatgttcacacaaacaactcacca 19699079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 502 - 599
Target Start/End: Complemental strand, 19709762 - 19709664
Alignment:
Q  502 tcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 599  Q
    |||||| ||||||||||||| ||||||| |  || ||   ||||||||||||||||||||||||| || ||| ||||||| ||||| ||||||||||||    
T  19709762 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatacatatgttcacacaaacaactcacca 19709664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 19709762 - 19709664
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 242  Q
    |||||| ||||||||||||| ||||| |||  || ||   ||||||||||||||||||||||||| || ||| ||||||| ||||| ||||||||||||    
T  19709762 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatacatatgttcacacaaacaactcacca 19709664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 797 - 906
Target Start/End: Complemental strand, 22355861 - 22355755
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcatat 894  Q
    ||||||||| ||||||||  |||| ||||||||||||||||||   |||||||||| ||||||| |||||||  ||||||||||||||| ||||||||||    
T  22355861 cattcaaca-tcaactat--atcatatagtttcaccatttcaagcattctcatattccaagtaatagagaaa--acaacatctcatgataaatatcatat 22355767  T
Q  895 ccaacatttaac 906  Q
     |||||| ||||    
T  22355766 tcaacatataac 22355755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 841 - 913
Target Start/End: Complemental strand, 34197429 - 34197357
Alignment:
Q  841 atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatatccaacatttaacaattcat 913  Q
    |||||||||||| ||||||| ||||| ||||||||||| ||||||| ||||||||||||||  |||||||||||    
T  34197429 atttctcatattccaagtaa-gagaacatacaacatcttatgataaatatcatatccaacacataacaattcat 34197357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 797 - 913
Target Start/End: Complemental strand, 7133746 - 7133633
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcatat 894  Q
    ||||||||| ||||||||||  || ||||||||||||||||||   |||||||||| ||||||| || ||||  ||||||||||||||| |||||||||     
T  7133746 cattcaaca-tcaactatca--catatagtttcaccatttcaagcattctcatattccaagtaatagggaaa--acaacatctcatgataaatatcataa 7133652  T
Q  895 ccaacatttaacaattcat 913  Q
    ||||||| |||| ||||||    
T  7133651 ccaacatataaccattcat 7133633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 312 - 356
Target Start/End: Original strand, 8043974 - 8044018
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatca 356  Q
    |||| |||||||||||||||||||||||| |||||||||||||||    
T  8043974 accacatcataataaacaatgtatatggattcaccaatatcatca 8044018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 669 - 713
Target Start/End: Original strand, 8043974 - 8044018
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatca 713  Q
    |||| |||||||||||||||||||||||| |||||||||||||||    
T  8043974 accacatcataataaacaatgtatatggattcaccaatatcatca 8044018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 797 - 913
Target Start/End: Original strand, 18167651 - 18167764
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcatat 894  Q
    ||||||||| ||||||||||  || ||||||||||||||||||   |||||||||| ||||||| || ||||  ||||||| ||||||| ||||||||||    
T  18167651 cattcaaca-tcaactatca--catatagtttcaccatttcaaccattctcatattccaagtaatagggaaa--acaacatatcatgataaatatcatat 18167745  T
Q  895 ccaacatttaacaattcat 913  Q
    ||||||| |||| ||||||    
T  18167746 ccaacatataaccattcat 18167764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 797 - 912
Target Start/End: Original strand, 14950879 - 14950991
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcatat 894  Q
    ||||||||| ||||||||||  || ||||||||||||||||||   |||||||||| ||||||| || ||||  ||||||||||||||| ||||||||||    
T  14950879 cattcaaca-tcaactatca--catatagtttcaccatttcaagcattctcatattccaagtaatagggaaa--acaacatctcatgataaatatcatat 14950973  T
Q  895 ccaacatttaacaattca 912  Q
     |||||| |||| |||||    
T  14950974 tcaacatataaccattca 14950991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 797 - 901
Target Start/End: Original strand, 15212203 - 15212305
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  |||| ||||||| ||||||| ||||| ||||||||||||||||  ||||||||||    
T  15212203 cattcaaca-tcaactat--atcatatagtttcaccattccaaacatttatcatattccaagtaa-gagaacatacaacatctcatgacaaatatcatat 15212298  T
Q  895 ccaacat 901  Q
    |||||||    
T  15212299 ccaacat 15212305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 817 - 906
Target Start/End: Original strand, 26678911 - 26679001
Alignment:
Q  817 atcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcatatccaacatttaac 906  Q
    |||| ||||||||||||||||||   |||||||||| ||||||| || ||||| ||||||||||||||| |||||||||| |||||| ||||    
T  26678911 atcatatagtttcaccatttcaagcattctcatattccaagtaatagggaaaa-acaacatctcatgataaatatcatattcaacatataac 26679001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 822 - 912
Target Start/End: Original strand, 34394080 - 34394170
Alignment:
Q  822 atagtttcaccatttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattca 912  Q
    ||||||||||||||||||   |||||||||| ||||| |||||  || ||||||||||||||| || |||||||||||||| |||| |||||    
T  34394080 atagtttcaccatttcaagcattctcatattccaagt-aagagggaaaacaacatctcatgataaacatcatatccaacatgtaaccattca 34394170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 798 - 901
Target Start/End: Original strand, 9294385 - 9294486
Alignment:
Q  798 attcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatatc 895  Q
    |||||||| ||||||||||  || ||||||||||||||||||  | |||| ||||| ||||||| ||||| ||||||||||||||||  |||||||||||    
T  9294385 attcaaca-tcaactatca--catatagtttcaccatttcaaacaattctaatattccaagtaa-gagaacatacaacatctcatgacaaatatcatatc 9294480  T
Q  896 caacat 901  Q
    ||||||    
T  9294481 caacat 9294486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 312 - 390
Target Start/End: Original strand, 14910986 - 14911064
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttg 390  Q
    |||| ||||||||||||||||||||| ||  ||||||||||||||||  ||  ||||||||||||| ||  ||||||||    
T  14910986 accaaatcataataaacaatgtatatcgatacaccaatatcatcacctttacataatttcacatcagatatatgatttg 14911064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 797 - 912
Target Start/End: Complemental strand, 15274057 - 15273944
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||| ||||||| ||||| ||||||||| |||||| || ||||||||    
T  15274057 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatattccaagtaa-gagaacatacaacatttcatgacaaatatcatat 15273962  T
Q  895 ccaacatttaacaattca 912  Q
    ||||||| |||| |||||    
T  15273961 ccaacatataaccattca 15273944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 832 - 914
Target Start/End: Complemental strand, 32461802 - 32461721
Alignment:
Q  832 catttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgataatatcatatccaacatttaacaattcatc 914  Q
    |||| |||||||||||||||  ||| ||| ||||| |||||||| |||||| |||||||||||||||||| | | ||||||||    
T  32461802 cattacaatatttctcatatatcaaataa-gagaacatacaacacctcatgttaatatcatatccaacatatcataattcatc 32461721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 817 - 913
Target Start/End: Complemental strand, 41257634 - 41257536
Alignment:
Q  817 atcaaatagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgataat-atcatatccaacatttaacaattcat 913  Q
    |||| |||||||||||| | ||| ||||| ||||||| |||| |||| |||||| | ||| || |||||||| |||||||||||||| |||||||||||    
T  41257634 atcatatagtttcaccactccaaatatttttcatattccaagcaaagggaaaatgccacaccttatgataattatcatatccaacatataacaattcat 41257536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 832 - 901
Target Start/End: Original strand, 9794234 - 9794302
Alignment:
Q  832 catttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgataatatcatatccaacat 901  Q
    |||| ||| |||||||||||  ||||||| ||||| |||||||| |||||| ||||||||||||||||||    
T  9794234 cattccaacatttctcatataccaagtaa-gagaacatacaacacctcatgttaatatcatatccaacat 9794302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 817 - 913
Target Start/End: Original strand, 14900369 - 14900465
Alignment:
Q  817 atcaaatagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgataatatcatatccaacatttaacaattcat 913  Q
    |||| |||||||||||||| ||| || ||||| |||| ||| ||| ||||| | |||||||||||||| ||||||| ||||||||| |||| ||||||    
T  14900369 atcacatagtttcaccattccaaataattctcgtatttcaaataa-gagaacacacaacatctcatgacaatatcacatccaacatataaccattcat 14900465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 847 - 914
Target Start/End: Complemental strand, 18110102 - 18110035
Alignment:
Q  847 catattacaagtaaagagaaaatacaacatctcatgataat-atcatatccaacatttaacaattcatc 914  Q
    |||||| ||||||| ||||| |||||||||||||||| ||| |||||||||||||| |||| |||||||    
T  18110102 catattccaagtaa-gagaacatacaacatctcatgacaattatcatatccaacatataaccattcatc 18110035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 838 - 913
Target Start/End: Complemental strand, 50221193 - 50221117
Alignment:
Q  838 aatatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattcat 913  Q
    |||| |||||||||| |||||||||||||||| ||||| || ||||| ||||||||||  ||||  |||||||||||    
T  50221193 aatacttctcatattccaagtaaagagaaaatgcaacaccttatgataaatatcatattaaacacctaacaattcat 50221117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 817 - 898
Target Start/End: Original strand, 10487547 - 10487629
Alignment:
Q  817 atcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcatatccaa 898  Q
    |||| ||||||||||||||||||   |||||||||| ||||||| || ||||| ||||||||||||||| || |||||||||||    
T  10487547 atcatatagtttcaccatttcaagcattctcatattccaagtaatagggaaaa-acaacatctcatgataaacatcatatccaa 10487629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 817 - 898
Target Start/End: Complemental strand, 16329204 - 16329122
Alignment:
Q  817 atcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcatatccaa 898  Q
    |||| ||||||||||||||||||   |||||||||| ||||||| || ||||| ||||||||||||||| || |||||||||||    
T  16329204 atcatatagtttcaccatttcaagcattctcatattccaagtaatagggaaaa-acaacatctcatgataaacatcatatccaa 16329122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 735 - 806
Target Start/End: Complemental strand, 41918001 - 41917931
Alignment:
Q  735 aatacatgatttgctcacattccaagtaaagaggaaaatacatcaccttaagatgaacatcacattcaacac 806  Q
    ||||||||| || | ||||||||||||||||| |||| |||| ||||||| ||||||||||| || ||||||    
T  41918001 aatacatgaatttcccacattccaagtaaagatgaaa-tacaacaccttatgatgaacatcatatccaacac 41917931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 797 - 901
Target Start/End: Original strand, 8373322 - 8373422
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatc 895  Q
    ||||||||| ||||||||||  || |||||||||||||| ||  ||| |||||||| ||||||| |||| || ||||||||||||||| ||||||||||     
T  8373322 cattcaaca-tcaactatca--catatagtttcaccattccagcatt-ctcatattccaagtaa-gagagaaaacaacatctcatgataaatatcatatt 8373416  T
Q  896 caacat 901  Q
    ||||||    
T  8373417 caacat 8373422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 8373496 - 8373542
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcacc 358  Q
    |||||||||||||||  |||||||||||| ||||||| |||||||||    
T  8373496 accatatcataataaggaatgtatatggattcaccaaaatcatcacc 8373542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 669 - 715
Target Start/End: Original strand, 8373496 - 8373542
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcacc 715  Q
    |||||||||||||||  |||||||||||| ||||||| |||||||||    
T  8373496 accatatcataataaggaatgtatatggattcaccaaaatcatcacc 8373542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 797 - 912
Target Start/End: Original strand, 18247047 - 18247160
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||   |||||| ||||| ||||||||||||||||  ||||||||||    
T  18247047 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatatcctaagtaa-gagaacatacaacatctcatgacaaatatcatat 18247142  T
Q  895 ccaacatttaacaattca 912  Q
    ||||||| |||| |||||    
T  18247143 ccaacatataaccattca 18247160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 817 - 913
Target Start/End: Original strand, 18275729 - 18275825
Alignment:
Q  817 atcaaatagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattcat 913  Q
    |||| |||||||||||| | ||| |||||||||||||  |||||| ||||| ||||||||||| ||||| |||||||||| |||| | |||||||||||    
T  18275729 atcacatagtttcaccactccaaatatttctcatattctaagtaa-gagaacatacaacatcttatgataaatatcatat-caacgtataacaattcat 18275825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 19019455 - 19019501
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcacc 358  Q
    |||||||||||||||  |||||||||||| ||||||| |||||||||    
T  19019455 accatatcataataaggaatgtatatggattcaccaaaatcatcacc 19019501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 669 - 715
Target Start/End: Original strand, 19019455 - 19019501
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcacc 715  Q
    |||||||||||||||  |||||||||||| ||||||| |||||||||    
T  19019455 accatatcataataaggaatgtatatggattcaccaaaatcatcacc 19019501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 541 - 617
Target Start/End: Complemental strand, 19082490 - 19082412
Alignment:
Q  541 tatgtatgcatgaacatatgactc-aataataatgcatatgtccacac-aacaactcaccatatcatcaccaatattta 617  Q
    |||||||||||||||||||| ||| || || || |||||||| ||||| ||||| |||||| |||||||||| ||||||    
T  19082490 tatgtatgcatgaacatatgcctcaaacaacaaagcatatgttcacacaaacaattcaccacatcatcaccagtattta 19082412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 19082490 - 19082412
Alignment:
Q  184 tatgtatgcatgaacatatgactc-aataataatgcatatgtccacac-aacaactcaccatatcatcaccaatattta 260  Q
    |||||||||||||||||||| ||| || || || |||||||| ||||| ||||| |||||| |||||||||| ||||||    
T  19082490 tatgtatgcatgaacatatgcctcaaacaacaaagcatatgttcacacaaacaattcaccacatcatcaccagtattta 19082412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 822 - 898
Target Start/End: Original strand, 19999408 - 19999485
Alignment:
Q  822 atagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatatccaa 898  Q
    |||||||||||||| |||  | |||||||||| ||||||| ||||| ||||||||||||||||  ||||||||||||||    
T  19999408 atagtttcaccattccaaacaattctcatattccaagtaa-gagaacatacaacatctcatgacaaatatcatatccaa 19999485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 797 - 906
Target Start/End: Complemental strand, 15288307 - 15288199
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcata 893  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||| ||||||| || ||||| ||||||||||||||| |||||||||    
T  15288307 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatattccaagtaatagggaaaa-acaacatctcatgataaatatcata 15288212  T
Q  894 tccaacatttaac 906  Q
    | |||||| ||||    
T  15288211 ttcaacatataac 15288199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 832 - 901
Target Start/End: Complemental strand, 19698732 - 19698664
Alignment:
Q  832 catttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgataatatcatatccaacat 901  Q
    |||| |||||||||||||||  ||||| ||||||| ||| |||| |||||| ||||||||| ||||||||    
T  19698732 cattccaatatttctcatataccaagt-aagagaacatataacacctcatgttaatatcatgtccaacat 19698664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 832 - 901
Target Start/End: Complemental strand, 19709317 - 19709249
Alignment:
Q  832 catttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgataatatcatatccaacat 901  Q
    |||| |||||||||||||||  ||||| ||||||| ||| |||| |||||| ||||||||| ||||||||    
T  19709317 cattccaatatttctcatataccaagt-aagagaacatataacacctcatgttaatatcatgtccaacat 19709249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 171; Significance: 2e-91; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 485 - 712
Target Start/End: Complemental strand, 21495809 - 21495581
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 584  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  21495809 catcatcaccaaaatcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcta 21495710  T
Q  585 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaata--ccatatcataata 682  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||| |  ||||||||||   |||||||| ||     
T  21495709 cacaacaactcaccaaatcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcaccacatatataatcaataatacatatcat-att 21495611  T
Q  683 aacaatgtatatggactcaccaatatcatc 712  Q
    ||||||||||||||||||||||||||||||    
T  21495610 aacaatgtatatggactcaccaatatcatc 21495581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 128 - 355
Target Start/End: Complemental strand, 21495809 - 21495581
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  21495809 catcatcaccaaaatcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcta 21495710  T
Q  228 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaata--ccatatcataata 325  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||| |  ||||||||||   |||||||| ||     
T  21495709 cacaacaactcaccaaatcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcaccacatatataatcaataatacatatcat-att 21495611  T
Q  326 aacaatgtatatggactcaccaatatcatc 355  Q
    ||||||||||||||||||||||||||||||    
T  21495610 aacaatgtatatggactcaccaatatcatc 21495581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 485 - 654
Target Start/End: Complemental strand, 16041135 - 16040966
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 584  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16041135 catcatcaccaaaatcatcgccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 16041036  T
Q  585 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 654  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  16041035 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca 16040966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 128 - 297
Target Start/End: Complemental strand, 16041135 - 16040966
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16041135 catcatcaccaaaatcatcgccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 16041036  T
Q  228 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  16041035 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca 16040966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 485 - 654
Target Start/End: Complemental strand, 16042811 - 16042642
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 584  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16042811 catcatcaccaaaatcatcgccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 16042712  T
Q  585 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 654  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  16042711 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca 16042642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 128 - 297
Target Start/End: Complemental strand, 16042811 - 16042642
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16042811 catcatcaccaaaatcatcgccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 16042712  T
Q  228 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  16042711 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca 16042642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 128 - 297
Target Start/End: Original strand, 22885125 - 22885294
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22885125 catcatcaccaaaatcatcaccaattggatatataaacatatttgtcatcaccaaatatgcatgcatgaacatatgactcaataataatgcatatgtcca 22885224  T
Q  228 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 297  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||| ||||||||    
T  22885225 cacaacaactcaccaaatcatcaccaatatttatttgcatttatgcaatcacaccaataatccatcacca 22885294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 485 - 654
Target Start/End: Original strand, 22885125 - 22885294
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 584  Q
    ||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22885125 catcatcaccaaaatcatcaccaattggatatataaacatatttgtcatcaccaaatatgcatgcatgaacatatgactcaataataatgcatatgtcca 22885224  T
Q  585 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 654  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||| ||||||||    
T  22885225 cacaacaactcaccaaatcatcaccaatatttatttgcatttatgcaatcacaccaataatccatcacca 22885294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 245 - 355
Target Start/End: Original strand, 18611189 - 18611297
Alignment:
Q  245 tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactca 344  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||  | ||||||||||||||||||||||| |||||||||||||||||||    
T  18611189 tcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca-atacataatcaataccatatcataat-aacaatgtatatggactca 18611286  T
Q  345 ccaatatcatc 355  Q
    |||||||||||    
T  18611287 ccaatatcatc 18611297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 602 - 712
Target Start/End: Original strand, 18611189 - 18611297
Alignment:
Q  602 tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactca 701  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||  | ||||||||||||||||||||||| |||||||||||||||||||    
T  18611189 tcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca-atacataatcaataccatatcataat-aacaatgtatatggactca 18611286  T
Q  702 ccaatatcatc 712  Q
    |||||||||||    
T  18611287 ccaatatcatc 18611297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 669 - 810
Target Start/End: Original strand, 18618205 - 18618345
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagagg 768  Q
    ||||||||||||||||||||||||||||| |||| || |||||||||   |  |||||| ||||||  |||||||||||||||||||||||||||| |||    
T  18618205 accatatcataataaacaatgtatatggattcacaaaaatcatcaccttcacataatttgacatcacttacatgatttgctcacattccaagtaaaaagg 18618304  T
Q  769 aaaatacatcaccttaagatgaacatcacattcaacactcaa 810  Q
    ||||||||||||||| |||| ||| || ||||||||| ||||    
T  18618305 aaaatacatcaccttgagat-aacttctcattcaacattcaa 18618345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 640 - 712
Target Start/End: Complemental strand, 16040922 - 16040850
Alignment:
Q  640 aataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcatc 712  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16040922 aatatttcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcatc 16040850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 283 - 355
Target Start/End: Complemental strand, 16040922 - 16040850
Alignment:
Q  283 aataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcatc 355  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16040922 aatatttcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcatc 16040850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 640 - 712
Target Start/End: Complemental strand, 16042598 - 16042526
Alignment:
Q  640 aataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcatc 712  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16042598 aatatttcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcatc 16042526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 283 - 355
Target Start/End: Complemental strand, 16042598 - 16042526
Alignment:
Q  283 aataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcatc 355  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16042598 aatatttcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcatc 16042526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 246 - 354
Target Start/End: Original strand, 22885331 - 22885438
Alignment:
Q  246 catcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcac 345  Q
    |||||| |||||||||||||||||||||||||| || |||||||||||| |||   | ||||||||||||||||| ||| ||||||||||||||||||||    
T  22885331 catcactaatatttatttgcatttatgcaatcacaccaataattcatcatcacacacttaatcaataccatatcacaat-aacaatgtatatggactcac 22885429  T
Q  346 caatatcat 354  Q
    |||||||||    
T  22885430 caatatcat 22885438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 603 - 711
Target Start/End: Original strand, 22885331 - 22885438
Alignment:
Q  603 catcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcac 702  Q
    |||||| |||||||||||||||||||||||||| || |||||||||||| |||   | ||||||||||||||||| ||| ||||||||||||||||||||    
T  22885331 catcactaatatttatttgcatttatgcaatcacaccaataattcatcatcacacacttaatcaataccatatcacaat-aacaatgtatatggactcac 22885429  T
Q  703 caatatcat 711  Q
    |||||||||    
T  22885430 caatatcat 22885438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 817 - 914
Target Start/End: Original strand, 23148784 - 23148882
Alignment:
Q  817 atcaaatagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattcatc 914  Q
    |||| |||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| |||||| ||||||||||||    
T  23148784 atcatatagtttcaccatttcaaatatttctcatattccaagtaa-gagaaaatacaacatctcatgataaatatcatatacaacatctaacaattcatc 23148882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 669 - 772
Target Start/End: Complemental strand, 41508336 - 41508235
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagagg 768  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||   |  |||||||||||||| | |||||||| ||  |||||||||||||||||    
T  41508336 accatatcataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacatcaattgcatgatttact--cattccaagtaaagagg 41508239  T
Q  769 aaaa 772  Q
    ||||    
T  41508238 aaaa 41508235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 817 - 914
Target Start/End: Complemental strand, 33612341 - 33612242
Alignment:
Q  817 atcaaatagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattcatc 914  Q
    |||| ||||||||| |||||||| ||||||||||||||||||||| ||||||| ||||||||| ||||| |||||||||||||||||  |||||||||||    
T  33612341 atcatatagtttcatcatttcaaatatttctcatattacaagtaacgagaaaacacaacatcttatgatcaatatcatatccaacatccaacaattcatc 33612242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 312 - 389
Target Start/End: Complemental strand, 41508336 - 41508259
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgattt 389  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||   |  |||||||||||||| ||||||||||    
T  41508336 accatatcataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacatcaattgcatgattt 41508259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 185 - 355
Target Start/End: Original strand, 18617780 - 18617962
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaa-caactcaccatatcatcaccaatatttatttgcatttatgcaatcatacga 283  Q
    |||||||||| |||||||  ||||| || ||| ||||||| || |||| ||| |||||||||  ||||||||||| | ||||||||||||||||| || |    
T  18617780 atgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatatt-acttgcatttatgcaatcacacca 18617878  T
Q  284 ataattcatcaccact-------------tgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcatc 355  Q
    |||||||||||||| |             | ||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  18617879 ataattcatcaccaatatcatcaccaatatacataatcaataccatatcataat-aacaatatatatggactcaccaatatcatc 18617962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 542 - 712
Target Start/End: Original strand, 18617780 - 18617962
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaa-caactcaccatatcatcaccaatatttatttgcatttatgcaatcatacga 640  Q
    |||||||||| |||||||  ||||| || ||| ||||||| || |||| ||| |||||||||  ||||||||||| | ||||||||||||||||| || |    
T  18617780 atgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatatt-acttgcatttatgcaatcacacca 18617878  T
Q  641 ataattcatcaccact-------------tgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcatc 712  Q
    |||||||||||||| |             | ||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  18617879 ataattcatcaccaatatcatcaccaatatacataatcaataccatatcataat-aacaatatatatggactcaccaatatcatc 18617962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 41508665 - 41508567
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 242  Q
    |||||| ||||||||||||| |||||||||  || ||   ||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||    
T  41508665 tcaccatttggatatataaaaatatctgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 41508567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 18611090 - 18611142
Alignment:
Q  245 tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 297  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  18611090 tcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca 18611142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 602 - 654
Target Start/End: Original strand, 18611090 - 18611142
Alignment:
Q  602 tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 654  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  18611090 tcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca 18611142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 817 - 901
Target Start/End: Complemental strand, 37654917 - 37654831
Alignment:
Q  817 atcaaatagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacat 901  Q
    |||| |||||||||||| | ||| ||||||||||||| |||||||||||||||||||||| || ||||| |||||||||| ||||||    
T  37654917 atcatatagtttcaccactccaaatatttctcatattccaagtaaagagaaaatacaacaccttatgataaatatcatattcaacat 37654831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 297
Target Start/End: Original strand, 18610986 - 18611098
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaa-caactcaccatatcatcaccaatatttatttgcatttatgcaatcatacga 283  Q
    |||||||||| |||||||  ||||| || ||| ||||||| || |||| ||| |||||||||  ||||||||||| | ||||||||||||||||| || |    
T  18610986 atgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatatt-acttgcatttatgcaatcacacca 18611084  T
Q  284 ataattcatcacca 297  Q
    ||||||||||||||    
T  18611085 ataattcatcacca 18611098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 542 - 654
Target Start/End: Original strand, 18610986 - 18611098
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaa-caactcaccatatcatcaccaatatttatttgcatttatgcaatcatacga 640  Q
    |||||||||| |||||||  ||||| || ||| ||||||| || |||| ||| |||||||||  ||||||||||| | ||||||||||||||||| || |    
T  18610986 atgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaatatt-acttgcatttatgcaatcacacca 18611084  T
Q  641 ataattcatcacca 654  Q
    ||||||||||||||    
T  18611085 ataattcatcacca 18611098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 797 - 900
Target Start/End: Complemental strand, 24718713 - 24718613
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaatatttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatatc 895  Q
    ||||||||| ||||||||||  || ||||||||||||||||||   |||||||||| ||||| ||||||| ||||||||||||||||  |||||||||||    
T  24718713 cattcaaca-tcaactatca--catatagtttcaccatttcaagcattctcatattccaagt-aagagaacatacaacatctcatgacaaatatcatatc 24718618  T
Q  896 caaca 900  Q
    |||||    
T  24718617 caaca 24718613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 826 - 914
Target Start/End: Original strand, 22885438 - 22885525
Alignment:
Q  826 tttcaccatttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgataatatcatatccaacatttaacaattcatc 914  Q
    ||||| |||| |||||||||||||||  ||||||| ||||| |||||||| |||||| |||||||||||||||||| | | ||||||||    
T  22885438 tttcatcattacaatatttctcatatatcaagtaa-gagaacatacaacacctcatgttaatatcatatccaacatatcataattcatc 22885525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 797 - 901
Target Start/End: Complemental strand, 24107883 - 24107781
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatat 894  Q
    ||||||||| ||||||||||  || ||||||||||||||||||  | |||||||||| ||||||| ||||| ||||||||||||||||  ||||||||||    
T  24107883 cattcaaca-tcaactatca--catatagtttcaccatttcaaacaattctcatattccaagtaa-gagaacatacaacatctcatgacaaatatcatat 24107788  T
Q  895 ccaacat 901  Q
    |||||||    
T  24107787 ccaacat 24107781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 832 - 914
Target Start/End: Complemental strand, 16040845 - 16040764
Alignment:
Q  832 catttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgataatatcatatccaacatttaacaattcatc 914  Q
    |||| |||||||||||||||  ||||||| ||||| |||||||| |||||| |||||||||||||||||| | | ||||||||    
T  16040845 cattacaatatttctcatataccaagtaa-gagaacatacaacacctcatgttaatatcatatccaacatatcataattcatc 16040764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 242
Target Start/End: Original strand, 18610857 - 18610955
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 242  Q
    |||||| ||||||||||||| ||||| |||  || ||   ||||||||||||||||||||||||| || ||| ||||||| ||||| ||||||||||||    
T  18610857 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatacatatgttcacacaaacaactcacca 18610955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 502 - 599
Target Start/End: Original strand, 18610857 - 18610955
Alignment:
Q  502 tcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 599  Q
    |||||| ||||||||||||| ||||||| |  || ||   ||||||||||||||||||||||||| || ||| ||||||| ||||| ||||||||||||    
T  18610857 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatacatatgttcacacaaacaactcacca 18610955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 542 - 599
Target Start/End: Complemental strand, 41508625 - 41508567
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 599  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||    
T  41508625 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 41508567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 246 - 295
Target Start/End: Original strand, 22885287 - 22885336
Alignment:
Q  246 catcaccaatatttatttgcatttatgcaatcatacgaataattcatcac 295  Q
    ||||||||||||||||||||||||||||||||| || |||||| ||||||    
T  22885287 catcaccaatatttatttgcatttatgcaatcacaccaataatccatcac 22885336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 603 - 652
Target Start/End: Original strand, 22885287 - 22885336
Alignment:
Q  603 catcaccaatatttatttgcatttatgcaatcatacgaataattcatcac 652  Q
    ||||||||||||||||||||||||||||||||| || |||||| ||||||    
T  22885287 catcaccaatatttatttgcatttatgcaatcacaccaataatccatcac 22885336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 798 - 912
Target Start/End: Complemental strand, 16040655 - 16040544
Alignment:
Q  798 attcaacactcaactatcaatcaaatagtttcaccatttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatcc 896  Q
    |||||||| ||||||||||  || ||||||||||||||||||   |||||||||| |||||||  || ||| ||||||||||||||| |||||||||| |    
T  16040655 attcaaca-tcaactatca--catatagtttcaccatttcaagcattctcatattccaagtaataaggaaa-acaacatctcatgataaatatcatattc 16040560  T
Q  897 aacatttaacaattca 912  Q
    ||||| |||| |||||    
T  16040559 aacatataaccattca 16040544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 838 - 913
Target Start/End: Original strand, 33171197 - 33171273
Alignment:
Q  838 aatatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattcat 913  Q
    |||| |||||||||| |||||||||||||||| ||||| || ||||| |||||||||| |||||  |||||||||||    
T  33171197 aatacttctcatattccaagtaaagagaaaatgcaacaccttatgataaatatcatattcaacacctaacaattcat 33171273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 797 - 901
Target Start/End: Complemental strand, 17151552 - 17151450
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatat 894  Q
    ||||||||| ||||||||||  || |||||||||| |||||||  | |||||||||| ||||||| ||||| ||||||||||||||||  ||||||||||    
T  17151552 cattcaaca-tcaactatca--catatagtttcactatttcaaacaattctcatattccaagtaa-gagaacatacaacatctcatgacaaatatcatat 17151457  T
Q  895 ccaacat 901  Q
    |||||||    
T  17151456 ccaacat 17151450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 822 - 913
Target Start/End: Original strand, 17284159 - 17284247
Alignment:
Q  822 atagtttcaccatttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgataatatcatatccaacatttaacaattcat 913  Q
    |||||||||||| | |||| | ||||||||| ||||||| ||||| ||||||||||||||||| ||||||||| |||||| | |||||||||    
T  17284159 atagtttcaccaatccaat-tgtctcatattccaagtaa-gagaacatacaacatctcatgatcatatcatat-caacatgtcacaattcat 17284247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 797 - 912
Target Start/End: Complemental strand, 24930410 - 24930298
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcatat 894  Q
    ||||||||| ||||||||||  || ||||||||||||||||||   |||||||||| ||||||| || ||||  ||||||||||||||| ||||||||||    
T  24930410 cattcaaca-tcaactatca--catatagtttcaccatttcaagcattctcatattccaagtaatagggaaa--acaacatctcatgataaatatcatat 24930316  T
Q  895 ccaacatttaacaattca 912  Q
     |||||| |||| |||||    
T  24930315 tcaacatataactattca 24930298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 797 - 912
Target Start/End: Complemental strand, 6775528 - 6775415
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||  ||||||| ||||| |||||||||||||||| || ||||||||    
T  6775528 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatataccaagtaa-gagaacatacaacatctcatgacaaatatcatat 6775433  T
Q  895 ccaacatttaacaattca 912  Q
    ||||||| |||| |||||    
T  6775432 ccaacatataaccattca 6775415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 832 - 914
Target Start/End: Complemental strand, 16042521 - 16042440
Alignment:
Q  832 catttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgataatatcatatccaacatttaacaattcatc 914  Q
    |||| |||||||||||||||  ||||| ||||||| |||||||| |||||| |||||||||| ||||||| | | ||||||||    
T  16042521 cattacaatatttctcatataccaagt-aagagaacatacaacacctcatgttaatatcataaccaacatatcataattcatc 16042440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 18618205 - 18618251
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcacc 358  Q
    ||||||||||||||||||||||||||||| |||| || |||||||||    
T  18618205 accatatcataataaacaatgtatatggattcacaaaaatcatcacc 18618251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 832 - 914
Target Start/End: Complemental strand, 21495576 - 21495495
Alignment:
Q  832 catttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgataatatcatatccaacatttaacaattcatc 914  Q
    |||| |||||||||||||||  ||||||| ||||| ||||||||  ||||| |||||||||||||||||| | | ||||||||    
T  21495576 cattacaatatttctcatatatcaagtaa-gagaacatacaacacatcatgttaatatcatatccaacatatcataattcatc 21495495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 832 - 893
Target Start/End: Original strand, 18617967 - 18618027
Alignment:
Q  832 catttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgataatatcata 893  Q
    |||| ||||||||||||||| |||||| ||||||| |||||||| |||||| ||||||||||    
T  18617967 cattacaatatttctcatataacaagt-aagagaacatacaacacctcatgttaatatcata 18618027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 797 - 901
Target Start/End: Complemental strand, 13722468 - 13722367
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcatat 894  Q
    ||||||||| ||||||||||  || ||||||||||||||||||   |||||||||| ||||||| || ||||  ||||||||||||||| ||||||||||    
T  13722468 cattcaaca-tcaactatca--catatagtttcaccatttcaagcattctcatattccaagtaatagggaaa--acaacatctcatgataaatatcatat 13722374  T
Q  895 ccaacat 901  Q
     ||||||    
T  13722373 tcaacat 13722367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 797 - 901
Target Start/End: Complemental strand, 13722616 - 13722515
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcatat 894  Q
    ||||||||| ||||||||||  || ||||||||||||||||||   |||||||||| ||||||| || ||||  ||||||||||||||| ||||||||||    
T  13722616 cattcaaca-tcaactatca--catatagtttcaccatttcaagcattctcatattccaagtaatagggaaa--acaacatctcatgataaatatcatat 13722522  T
Q  895 ccaacat 901  Q
     ||||||    
T  13722521 tcaacat 13722515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 797 - 901
Target Start/End: Complemental strand, 13722764 - 13722663
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcatat 894  Q
    ||||||||| ||||||||||  || ||||||||||||||||||   |||||||||| ||||||| || ||||  ||||||||||||||| ||||||||||    
T  13722764 cattcaaca-tcaactatca--catatagtttcaccatttcaagcattctcatattccaagtaatagggaaa--acaacatctcatgataaatatcatat 13722670  T
Q  895 ccaacat 901  Q
     ||||||    
T  13722669 tcaacat 13722663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 797 - 901
Target Start/End: Complemental strand, 13722912 - 13722811
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcatat 894  Q
    ||||||||| ||||||||||  || ||||||||||||||||||   |||||||||| ||||||| || ||||  ||||||||||||||| ||||||||||    
T  13722912 cattcaaca-tcaactatca--catatagtttcaccatttcaagcattctcatattccaagtaatagggaaa--acaacatctcatgataaatatcatat 13722818  T
Q  895 ccaacat 901  Q
     ||||||    
T  13722817 tcaacat 13722811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 797 - 901
Target Start/End: Complemental strand, 13723060 - 13722959
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcatat 894  Q
    ||||||||| ||||||||||  || ||||||||||||||||||   |||||||||| ||||||| || ||||  ||||||||||||||| ||||||||||    
T  13723060 cattcaaca-tcaactatca--catatagtttcaccatttcaagcattctcatattccaagtaatagggaaa--acaacatctcatgataaatatcatat 13722966  T
Q  895 ccaacat 901  Q
     ||||||    
T  13722965 tcaacat 13722959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 817 - 898
Target Start/End: Original strand, 5237072 - 5237154
Alignment:
Q  817 atcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcatatccaa 898  Q
    |||| ||||||||||||||||||   |||||||||| ||||||| || ||||| ||||||||||||||| || |||||||||||    
T  5237072 atcatatagtttcaccatttcaagcattctcatattccaagtaatagggaaaa-acaacatctcatgataaacatcatatccaa 5237154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 735 - 806
Target Start/End: Original strand, 17500949 - 17501019
Alignment:
Q  735 aatacatgatttgctcacattccaagtaaagaggaaaatacatcaccttaagatgaacatcacattcaacac 806  Q
    ||||||||| || | ||||||||||||||||| | ||||||| ||||||| ||| ||||||| |||||||||    
T  17500949 aatacatgaatttcccacattccaagtaaagatg-aaatacaacaccttatgataaacatcatattcaacac 17501019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 817 - 914
Target Start/End: Complemental strand, 23227296 - 23227197
Alignment:
Q  817 atcaaatagtttcaccatttcaatatttc-tcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattcatc 914  Q
    |||| |||||||||||| |||||   ||| ||||||| ||| ||| ||||||| ||||| ||| ||||| ||||||| ||||||||| ||||||||||||    
T  23227296 atcatatagtttcaccaattcaaacgttcctcatattgcaaataacgagaaaacacaacttcttatgatcaatatcacatccaacatctaacaattcatc 23227197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 817 - 898
Target Start/End: Complemental strand, 24662526 - 24662444
Alignment:
Q  817 atcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcatatccaa 898  Q
    |||| ||||||||||||||||||   |||||||||| ||||||| || ||||| ||||||||||||||| || |||||||||||    
T  24662526 atcatatagtttcaccatttcaagcattctcatattccaagtaatagggaaaa-acaacatctcatgataaacatcatatccaa 24662444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 797 - 901
Target Start/End: Original strand, 28836454 - 28836556
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||  ||||||| ||||| ||||||||||||||||  ||||||||||    
T  28836454 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatatcccaagtaa-gagaacatacaacatctcatgacaaatatcatat 28836549  T
Q  895 ccaacat 901  Q
    |||||||    
T  28836550 ccaacat 28836556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 817 - 898
Target Start/End: Original strand, 43684531 - 43684613
Alignment:
Q  817 atcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcatatccaa 898  Q
    |||| ||||||||||||||||||   |||||||||| ||||||| || ||||| ||||||||||||||| || |||||||||||    
T  43684531 atcatatagtttcaccatttcaagcattctcatattccaagtaatagggaaaa-acaacatctcatgataaacatcatatccaa 43684613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 817 - 913
Target Start/End: Original strand, 15932236 - 15932332
Alignment:
Q  817 atcaaatagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattcat 913  Q
    |||| |||||||||||| | ||| ||||||||||||  ||||||| ||||| ||||||||||| ||||| |||||||||| ||| || |||||||||||    
T  15932236 atcacatagtttcaccactccaaatatttctcatatgccaagtaa-gagaacatacaacatcttatgataaatatcatat-caatatataacaattcat 15932332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 242
Target Start/End: Original strand, 18617691 - 18617749
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 242  Q
    ||||||||||||||||||||||||| || |||  |||||| ||||| ||||||||||||    
T  18617691 atgtatgcatgaacatatgactcaacaacaatatatatgttcacacaaacaactcacca 18617749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 542 - 599
Target Start/End: Original strand, 18617691 - 18617749
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 599  Q
    ||||||||||||||||||||||||| || |||  |||||| ||||| ||||||||||||    
T  18617691 atgtatgcatgaacatatgactcaacaacaatatatatgttcacacaaacaactcacca 18617749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 843 - 913
Target Start/End: Original strand, 26010374 - 26010442
Alignment:
Q  843 ttctcatattacaagtaaagagaaaatacaacatctcatgataatatcatatccaacatttaacaattcat 913  Q
    |||||||||| | ||||| ||||| ||||||||||| ||||||| ||||||| |||||| |||||||||||    
T  26010374 ttctcatattcccagtaa-gagaacatacaacatcttatgataaaatcatat-caacatataacaattcat 26010442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 832 - 901
Target Start/End: Original strand, 18611302 - 18611370
Alignment:
Q  832 catttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgataatatcatatccaacat 901  Q
    |||| |||||||||||||||  ||||| ||||||| ||| |||| |||||| ||||||||| ||||||||    
T  18611302 cattccaatatttctcatataccaagt-aagagaacatataacacctcatgttaatatcatgtccaacat 18611370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 158; Significance: 1e-83; HSPs: 7)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 128 - 297
Target Start/End: Original strand, 44727 - 44896
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44727 catcatcaccaaaatcatcaccaattggatatataaacataactgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 44826  T
Q  228 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  44827 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca 44896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 128 - 297
Target Start/End: Original strand, 52923 - 53092
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52923 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 53022  T
Q  228 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 297  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  53023 cacaacaactcaccaaatcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca 53092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #3
Raw Score: 150; E-Value: 8e-79
Query Start/End: Original strand, 485 - 654
Target Start/End: Original strand, 44727 - 44896
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 584  Q
    ||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44727 catcatcaccaaaatcatcaccaattggatatataaacataactgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 44826  T
Q  585 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 654  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  44827 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca 44896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #4
Raw Score: 150; E-Value: 8e-79
Query Start/End: Original strand, 485 - 654
Target Start/End: Original strand, 52923 - 53092
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 584  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52923 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 53022  T
Q  585 cacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 654  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  53023 cacaacaactcaccaaatcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca 53092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #5
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 669 - 803
Target Start/End: Original strand, 53346 - 53479
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatc-taatttcacatcaaatacatgatttgctcacattccaagtaaagag 767  Q
    |||||||||||||||| |||||||||||| | | ||| |||||||||  | || |||||||||||||  |||||||||||||||||||||||||||||||    
T  53346 accatatcataataaagaatgtatatggattaatcaaaatcatcacct-tctcataatttcacatcacttacatgatttgctcacattccaagtaaagag 53444  T
Q  768 gaaaatacatcaccttaagatgaacatcacattcaa 803  Q
    || || ||||||||||||||| ||||||||||||||    
T  53445 gagaa-acatcaccttaagataaacatcacattcaa 53479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 245 - 298
Target Start/End: Original strand, 53084 - 53137
Alignment:
Q  245 tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccac 298  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  53084 tcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcaccac 53137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 602 - 655
Target Start/End: Original strand, 53084 - 53137
Alignment:
Q  602 tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccac 655  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  53084 tcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcaccac 53137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 155; Significance: 9e-82; HSPs: 4)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 155; E-Value: 9e-82
Query Start/End: Original strand, 485 - 712
Target Start/End: Complemental strand, 14946 - 14705
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 584  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14946 catcatcaccaaaatcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 14847  T
Q  585 cacaacaactcaccatatcatcaccaata--------------tttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaatac 670  Q
    ||||||||||||||| | |||||||||||              ||||||||||| ||||| |||| || |||||||||||||||| | || |||||||||    
T  14846 cacaacaactcaccaaaacatcaccaataattcatcaccaatttttatttgcatgtatgcgatcacaccaataattcatcaccacattcacaatcaatac 14747  T
Q  671 catatcataataaacaatgtatatggactcaccaatatcatc 712  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14746 catatcataataaacaatgtatatggactcaccaatatcatc 14705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 155; E-Value: 9e-82
Query Start/End: Original strand, 128 - 355
Target Start/End: Complemental strand, 14946 - 14705
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14946 catcatcaccaaaatcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 14847  T
Q  228 cacaacaactcaccatatcatcaccaata--------------tttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaatac 313  Q
    ||||||||||||||| | |||||||||||              ||||||||||| ||||| |||| || |||||||||||||||| | || |||||||||    
T  14846 cacaacaactcaccaaaacatcaccaataattcatcaccaatttttatttgcatgtatgcgatcacaccaataattcatcaccacattcacaatcaatac 14747  T
Q  314 catatcataataaacaatgtatatggactcaccaatatcatc 355  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14746 catatcataataaacaatgtatatggactcaccaatatcatc 14705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 832 - 901
Target Start/End: Complemental strand, 14700 - 14632
Alignment:
Q  832 catttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgataatatcatatccaacat 901  Q
    |||| |||||||||||||||  ||||||| | ||| ||||| || |||||| ||||||||||||||||||    
T  14700 cattccaatatttctcatataccaagtaa-gtgaacatacagcacctcatgttaatatcatatccaacat 14632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 830 - 878
Target Start/End: Complemental strand, 105868 - 105819
Alignment:
Q  830 accatttcaat-atttctcatattacaagtaaagagaaaatacaacatct 878  Q
    ||||||||||| |||||||||||| ||||||| ||||||| |||||||||    
T  105868 accatttcaattatttctcatattgcaagtaacgagaaaacacaacatct 105819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 139; Significance: 3e-72; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 538 - 712
Target Start/End: Complemental strand, 25266679 - 25266505
Alignment:
Q  538 aaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcata 637  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  25266679 aaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcaca 25266580  T
Q  638 cgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcatc 712  Q
      |||||||||||||| | |||||||| ||||  |||||||| ||||||||||||||||||||||||||||||||    
T  25266579 tcaataattcatcacctcatgcataattaatattatatcatagtaaacaatgtatatggactcaccaatatcatc 25266505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 181 - 355
Target Start/End: Complemental strand, 25266679 - 25266505
Alignment:
Q  181 aaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcata 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  25266679 aaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcaca 25266580  T
Q  281 cgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcatc 355  Q
      |||||||||||||| | |||||||| ||||  |||||||| ||||||||||||||||||||||||||||||||    
T  25266579 tcaataattcatcacctcatgcataattaatattatatcatagtaaacaatgtatatggactcaccaatatcatc 25266505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 497 - 712
Target Start/End: Complemental strand, 28032586 - 28032372
Alignment:
Q  497 aatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactca 596  Q
    ||||||||||| ||||||||||||| ||||||| |  || ||   ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  28032586 aatcatcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactca 28032487  T
Q  597 ccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatgg 696  Q
    ||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||| || |||||||||||||||||||||| ||||||||||||||    
T  28032486 ccatatcatcaccaatatttatttgcatttatgcattcacaccaataattcatcaccacatggataatcaataccatatcataat-aacaatgtatatgg 28032388  T
Q  697 actcaccaatatcatc 712  Q
    ||||||||| ||||||    
T  28032387 actcaccaacatcatc 28032372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 140 - 355
Target Start/End: Complemental strand, 28032586 - 28032372
Alignment:
Q  140 aatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactca 239  Q
    ||||||||||| ||||||||||||| ||||| |||  || ||   ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  28032586 aatcatcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactca 28032487  T
Q  240 ccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatgg 339  Q
    ||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||| || |||||||||||||||||||||| ||||||||||||||    
T  28032486 ccatatcatcaccaatatttatttgcatttatgcattcacaccaataattcatcaccacatggataatcaataccatatcataat-aacaatgtatatgg 28032388  T
Q  340 actcaccaatatcatc 355  Q
    ||||||||| ||||||    
T  28032387 actcaccaacatcatc 28032372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 485 - 712
Target Start/End: Complemental strand, 23779424 - 23779185
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 584  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23779424 catcatcaccaaaatcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaatattaatgcatatgtcca 23779325  T
Q  585 cacaacaactcaccatatcatca------------ccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaatacca 672  Q
    ||||| |||||| ||||||||||            ||||||| |||||||||||||||||||  || |||||||||||||||  | |||||| |||  ||    
T  23779324 cacaaaaactcatcatatcatcaccaaaatcgtcaccaatatatatttgcatttatgcaatcgcaccaataattcatcaccaagtacataattaatctca 23779225  T
Q  673 tatcataataaacaatgtatatggactcaccaatatcatc 712  Q
    ||||| |||||| || ||||||||||||||||| ||||||    
T  23779224 tatcacaataaataaggtatatggactcaccaacatcatc 23779185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 128 - 355
Target Start/End: Complemental strand, 23779424 - 23779185
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23779424 catcatcaccaaaatcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaatattaatgcatatgtcca 23779325  T
Q  228 cacaacaactcaccatatcatca------------ccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaatacca 315  Q
    ||||| |||||| ||||||||||            ||||||| |||||||||||||||||||  || |||||||||||||||  | |||||| |||  ||    
T  23779324 cacaaaaactcatcatatcatcaccaaaatcgtcaccaatatatatttgcatttatgcaatcgcaccaataattcatcaccaagtacataattaatctca 23779225  T
Q  316 tatcataataaacaatgtatatggactcaccaatatcatc 355  Q
    ||||| |||||| || ||||||||||||||||| ||||||    
T  23779224 tatcacaataaataaggtatatggactcaccaacatcatc 23779185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 129 - 355
Target Start/End: Original strand, 17203229 - 17203453
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 228  Q
    ||||||||||| |||||||||| || |||||||||| ||||| |||  || ||   ||||||||||||||||||||||||| || ||||||||||| |||    
T  17203229 atcatcaccaatatcatcaccatttagatatataaaaatatccgtctccatcactcatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 17203328  T
Q  229 acaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaac 328  Q
    ||||||| |||||| ||  ||||||||||| ||||||||||||||||||| || |||||||||||||||| | ||| ||||||||||||||||||| | |    
T  17203329 acaacaattcaccaaattctcaccaatatt-atttgcatttatgcaatcacaccaataattcatcaccacatacattatcaataccatatcataat-agc 17203426  T
Q  329 aatgtatatggactcaccaatatcatc 355  Q
    ||| |||||||||||||||||||||||    
T  17203427 aatatatatggactcaccaatatcatc 17203453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 486 - 712
Target Start/End: Original strand, 17203229 - 17203453
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 585  Q
    ||||||||||| |||||||||| || |||||||||| ||||||| |  || ||   ||||||||||||||||||||||||| || ||||||||||| |||    
T  17203229 atcatcaccaatatcatcaccatttagatatataaaaatatccgtctccatcactcatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 17203328  T
Q  586 acaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaac 685  Q
    ||||||| |||||| ||  ||||||||||| ||||||||||||||||||| || |||||||||||||||| | ||| ||||||||||||||||||| | |    
T  17203329 acaacaattcaccaaattctcaccaatatt-atttgcatttatgcaatcacaccaataattcatcaccacatacattatcaataccatatcataat-agc 17203426  T
Q  686 aatgtatatggactcaccaatatcatc 712  Q
    ||| |||||||||||||||||||||||    
T  17203427 aatatatatggactcaccaatatcatc 17203453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 669 - 824
Target Start/End: Original strand, 32464832 - 32464987
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagagg 768  Q
    |||||||||||||||||||  |||||||| |||||||||||||||     |  |||||||||||||| ||||||||||||||||||||||||||||||||    
T  32464832 accatatcataataaacaacatatatggattcaccaatatcatcaatttcacataatttcacatcaattacatgatttgctcacattccaagtaaagagg 32464931  T
Q  769 aaaatacatcaccttaagatgaacatcacattcaacactcaactatcaatcaaata 824  Q
    |||||||||||||||||||| ||||||| |||||| |||||||| |||||||||||    
T  32464932 aaaatacatcaccttaagataaacatcatattcaatactcaactgtcaatcaaata 32464987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 242 - 354
Target Start/End: Original strand, 22255294 - 22255406
Alignment:
Q  242 atatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggac 341  Q
    ||||||||||||||||| ||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22255294 atatcatcaccaatattcatttgcatttatgcaatcacaccgataattcatcaccacttgcataatcaataccatatcacaataaacaatgtatatggac 22255393  T
Q  342 tcaccaatatcat 354  Q
     ||||||||||||    
T  22255394 ccaccaatatcat 22255406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 599 - 711
Target Start/End: Original strand, 22255294 - 22255406
Alignment:
Q  599 atatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggac 698  Q
    ||||||||||||||||| ||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22255294 atatcatcaccaatattcatttgcatttatgcaatcacaccgataattcatcaccacttgcataatcaataccatatcacaataaacaatgtatatggac 22255393  T
Q  699 tcaccaatatcat 711  Q
     ||||||||||||    
T  22255394 ccaccaatatcat 22255406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 185 - 363
Target Start/End: Original strand, 22255130 - 22255309
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaa-caactcaccatatcatcaccaatatttatttgcatttatgcaatcatacga 283  Q
    |||||||||| |||||||  ||||| || ||| ||||||| || |||| ||| |||||||||  ||||||||  ||| ||||||||||||||||| || |    
T  22255130 atgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaattattacttgcatttatgcaatcacacca 22255229  T
Q  284 ataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcatcaccaatat 363  Q
    | ||||||||||||||||||||||||||||||||| | |||||||||| ||||| |||||||||||||||||||||||||    
T  22255230 acaattcatcaccacttgcataatcaataccatattacaataaacaatatatattgactcaccaatatcatcaccaatat 22255309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 542 - 720
Target Start/End: Original strand, 22255130 - 22255309
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaa-caactcaccatatcatcaccaatatttatttgcatttatgcaatcatacga 640  Q
    |||||||||| |||||||  ||||| || ||| ||||||| || |||| ||| |||||||||  ||||||||  ||| ||||||||||||||||| || |    
T  22255130 atgtatgcataaacatatatctcaacaacaatacatatgttcatacaaacaattcaccatattctcaccaattattacttgcatttatgcaatcacacca 22255229  T
Q  641 ataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcatcaccaatat 720  Q
    | ||||||||||||||||||||||||||||||||| | |||||||||| ||||| |||||||||||||||||||||||||    
T  22255230 acaattcatcaccacttgcataatcaataccatattacaataaacaatatatattgactcaccaatatcatcaccaatat 22255309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 612 - 712
Target Start/End: Complemental strand, 7513355 - 7513256
Alignment:
Q  612 tatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcat 711  Q
    |||||||||||||||| | ||||| || |||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7513355 tatttatttgcatttaggtaatcacaccaataattcatcaccacatacataatcaataccatatcataat-aacaatgtatatggactcaccaatatcat 7513257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 255 - 355
Target Start/End: Complemental strand, 7513355 - 7513256
Alignment:
Q  255 tatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcat 354  Q
    |||||||||||||||| | ||||| || |||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7513355 tatttatttgcatttaggtaatcacaccaataattcatcaccacatacataatcaataccatatcataat-aacaatgtatatggactcaccaatatcat 7513257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 817 - 914
Target Start/End: Original strand, 19658840 - 19658938
Alignment:
Q  817 atcaaatagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatatccaacatttaacaattcatc 914  Q
    |||| |||||||||||| ||||| ||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19658840 atcatatagtttcaccaattcaaatatttctcatattccaagtaaa-agaaaatacaacatctcatgataaatatcatatccaacatttaacaattcatc 19658938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 146 - 242
Target Start/End: Original strand, 32464580 - 32464675
Alignment:
Q  146 caccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcacca 242  Q
    ||||| ||||||||||||| |||||||||| || ||   ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||    
T  32464580 caccatttggatatataaa-atatctgtcaccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcacca 32464675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 822 - 895
Target Start/End: Complemental strand, 19670412 - 19670338
Alignment:
Q  822 atagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatc 895  Q
    |||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||    
T  19670412 atagtttcaccatttcaaatatttctcatattccaagtaa-gagaaaatacaacatctcatgataaatatcatatc 19670338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 129 - 242
Target Start/End: Original strand, 22254985 - 22255099
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 228  Q
    |||||||| || |||||||||| ||||||||||||| |||| ||||  || ||   ||||||||||||||||||||||||| || ||| ||||||| |||    
T  22254985 atcatcactaatatcatcaccatttggatatataaaaatatttgtctccatcagtcatgtatgcatgaacatatgactcaacaacaattcatatgttcac 22255084  T
Q  229 ac-aacaactcacca 242  Q
    || ||||||||||||    
T  22255085 acaaacaactcacca 22255099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 763 - 824
Target Start/End: Complemental strand, 7513043 - 7512982
Alignment:
Q  763 aagaggaaaatacatcaccttaagatgaacatcacattcaacactcaactatcaatcaaata 824  Q
    |||||||||| ||||||| ||||||| |||||||||||||||||||||||| ||||||||||    
T  7513043 aagaggaaaagacatcactttaagataaacatcacattcaacactcaactaacaatcaaata 7512982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 542 - 599
Target Start/End: Original strand, 32464618 - 32464675
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcacca 599  Q
    ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||    
T  32464618 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcacca 32464675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 817 - 914
Target Start/End: Original strand, 19665557 - 19665655
Alignment:
Q  817 atcaaatagtttcaccatttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattcatc 914  Q
    |||| ||||||||| ||||||||  ||||||||||| ||||||| ||||||| ||||| ||| ||| | ||||||| ||||||||| ||||||||||||    
T  19665557 atcatatagtttcaacatttcaacgtttctcatattgcaagtaacgagaaaacacaacttcttatgttcaatatcacatccaacatctaacaattcatc 19665655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 797 - 912
Target Start/End: Original strand, 21140735 - 21140848
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| ||| || |||||||||| ||||||| ||||| ||||||||||||||||  ||||||||||    
T  21140735 cattcaaca-tcaactat--atcatatagtttcaccattccaaataattctcatattccaagtaa-gagaacatacaacatctcatgacaaatatcatat 21140830  T
Q  895 ccaacatttaacaattca 912  Q
    ||||||| |||| |||||    
T  21140831 ccaacatataaccattca 21140848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 797 - 901
Target Start/End: Original strand, 34823058 - 34823160
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatat 894  Q
    ||||||||| ||||||||  |||| ||||||||||||||||||  |||||||||||| ||||| ||| ||| ||||||||||||||||  ||||||||||    
T  34823058 cattcaaca-tcaactat--atcatatagtttcaccatttcaagcatttctcatattccaagt-aagcgaacatacaacatctcatgacaaatatcatat 34823153  T
Q  895 ccaacat 901  Q
    |||||||    
T  34823154 ccaacat 34823160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 7513620 - 7513522
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 242  Q
    |||||| ||||||||||||| |||| ||||  || ||   ||||||||||||||||||||||||| || ||| ||||||| ||||| ||||||||||||    
T  7513620 tcaccatttggatatataaaaatatttgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatacatatgttcacacaaacaactcacca 7513522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 797 - 912
Target Start/End: Complemental strand, 21275824 - 21275711
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||| ||||||| ||||| |||||||||||||||| || ||||||||    
T  21275824 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatattccaagtaa-gagaacatacaacatctcatgacaaatatcatat 21275729  T
Q  895 ccaacatttaacaattca 912  Q
    ||||||| |||| |||||    
T  21275728 ccaacatataaccattca 21275711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 486 - 599
Target Start/End: Original strand, 22254985 - 22255099
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 585  Q
    |||||||| || |||||||||| ||||||||||||| ||||  | |  || ||   ||||||||||||||||||||||||| || ||| ||||||| |||    
T  22254985 atcatcactaatatcatcaccatttggatatataaaaatatttgtctccatcagtcatgtatgcatgaacatatgactcaacaacaattcatatgttcac 22255084  T
Q  586 ac-aacaactcacca 599  Q
    || ||||||||||||    
T  22255085 acaaacaactcacca 22255099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 797 - 913
Target Start/End: Original strand, 25600823 - 25600936
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatc 895  Q
    ||||||||| ||||||||||  || ||||||||||||||||||   |||||||||| ||||| ||||||| |||||| |||| ||||| |||||||||||    
T  25600823 cattcaaca-tcaactatca--catatagtttcaccatttcaagcattctcatattccaagt-aagagaacatacaatatcttatgataaatatcatatc 25600918  T
Q  896 caacatttaacaattcat 913  Q
    || ||  |||||||||||    
T  25600919 cagcacataacaattcat 25600936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 542 - 599
Target Start/End: Complemental strand, 42179935 - 42179877
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 599  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||    
T  42179935 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 42179877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 242
Target Start/End: Complemental strand, 42179935 - 42179877
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 242  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||    
T  42179935 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 42179877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 797 - 883
Target Start/End: Original strand, 12726913 - 12726996
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatga 883  Q
    ||||||||| ||||||||  |||| ||||||||||||||||||  |||||||||||| ||||||| ||||| ||||||||||||||||    
T  12726913 cattcaaca-tcaactat--atcatatagtttcaccatttcaagcatttctcatattccaagtaa-gagaacatacaacatctcatga 12726996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 832 - 898
Target Start/End: Complemental strand, 7513251 - 7513186
Alignment:
Q  832 catttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgataatatcatatccaa 898  Q
    ||||||||||||||||||||  ||||| ||||||| |||||||| |||||| |||||| ||||||||    
T  7513251 catttcaatatttctcatataccaagt-aagagaacatacaacacctcatgttaatatgatatccaa 7513186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 542 - 599
Target Start/End: Complemental strand, 7513580 - 7513522
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 599  Q
    ||||||||||||||||||||||||| || ||| ||||||| ||||| ||||||||||||    
T  7513580 atgtatgcatgaacatatgactcaacaacaatacatatgttcacacaaacaactcacca 7513522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 797 - 912
Target Start/End: Complemental strand, 12643322 - 12643209
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||| ||||||| ||||| ||||||||| |||||| || ||||||||    
T  12643322 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatattccaagtaa-gagaacatacaacatttcatgacaaatatcatat 12643227  T
Q  895 ccaacatttaacaattca 912  Q
    ||||||| |||| |||||    
T  12643226 ccaacatataaccattca 12643209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 798 - 901
Target Start/End: Complemental strand, 24827865 - 24827764
Alignment:
Q  798 attcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatatc 895  Q
    |||||||| ||||||||||  || ||||||||||||||||||  | ||||| |||| ||||||| ||||| ||||||||||||||||  |||||||||||    
T  24827865 attcaaca-tcaactatca--catatagtttcaccatttcaaacaattctcctattccaagtaa-gagaacatacaacatctcatgacaaatatcatatc 24827770  T
Q  896 caacat 901  Q
    ||||||    
T  24827769 caacat 24827764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 841 - 913
Target Start/End: Original strand, 66468 - 66540
Alignment:
Q  841 atttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattcat 913  Q
    |||||||||||| ||||||| ||||| ||||||||||| ||||| |||||||||| |||||  |||||||||||    
T  66468 atttctcatattccaagtaa-gagaacatacaacatcttatgataaatatcatatacaacacataacaattcat 66540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 542 - 654
Target Start/End: Complemental strand, 7513491 - 7513379
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaa-caactcaccatatcatcaccaatatttatttgcatttatgcaatcatacga 640  Q
    |||||||||| |||||||  ||||| || ||| ||||||| || |||| ||| | |||||||  ||||||||||| | ||||||||||||||||| || |    
T  7513491 atgtatgcataaacatatttctcaacaacaatacatatgttcatacaaacaatttaccatattctcaccaatatt-acttgcatttatgcaatcacacca 7513393  T
Q  641 ataattcatcacca 654  Q
    ||||||||| ||||    
T  7513392 ataattcattacca 7513379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 297
Target Start/End: Complemental strand, 7513491 - 7513379
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaa-caactcaccatatcatcaccaatatttatttgcatttatgcaatcatacga 283  Q
    |||||||||| |||||||  ||||| || ||| ||||||| || |||| ||| | |||||||  ||||||||||| | ||||||||||||||||| || |    
T  7513491 atgtatgcataaacatatttctcaacaacaatacatatgttcatacaaacaatttaccatattctcaccaatatt-acttgcatttatgcaatcacacca 7513393  T
Q  284 ataattcatcacca 297  Q
    ||||||||| ||||    
T  7513392 ataattcattacca 7513379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 817 - 901
Target Start/End: Original strand, 15632274 - 15632359
Alignment:
Q  817 atcaaatagtttcaccatttcaatatttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatatccaacat 901  Q
    |||||||||||||| ||||||| ||| ||||||||  |||||||  |||||| ||||| | | |||| ||||||||||||||||||    
T  15632274 atcaaatagtttcatcatttcattatatctcatatcccaagtaacaagaaaacacaacgtattatgattaatatcatatccaacat 15632359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 669 - 714
Target Start/End: Complemental strand, 42179677 - 42179632
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcac 714  Q
    ||||||||||||||||||||||||||||| ||| || |||||||||    
T  42179677 accatatcataataaacaatgtatatggattcatcattatcatcac 42179632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 42179677 - 42179632
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcac 357  Q
    ||||||||||||||||||||||||||||| ||| || |||||||||    
T  42179677 accatatcataataaacaatgtatatggattcatcattatcatcac 42179632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 312 - 356
Target Start/End: Original strand, 32464832 - 32464876
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatca 356  Q
    |||||||||||||||||||  |||||||| |||||||||||||||    
T  32464832 accatatcataataaacaacatatatggattcaccaatatcatca 32464876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 832 - 912
Target Start/End: Complemental strand, 42179629 - 42179550
Alignment:
Q  832 catttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgataatatcatatccaacatttaacaattca 912  Q
    |||| |||||||||||||||  ||||||| ||||| |||||||| |||||| ||||||||||| |||| | |||| |||||    
T  42179629 cattacaatatttctcatataccaagtaa-gagaacatacaacacctcatgttaatatcatattcaacgtataaccattca 42179550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 817 - 906
Target Start/End: Complemental strand, 3800393 - 3800303
Alignment:
Q  817 atcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcatatccaacatttaac 906  Q
    |||| ||||||||||||||||||   |||||||||| ||||||| || ||||| |||||||||| |||| |||||||||| |||||| ||||    
T  3800393 atcatatagtttcaccatttcaagcattctcatattccaagtaatagggaaaa-acaacatctcttgataaatatcatattcaacatataac 3800303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 817 - 898
Target Start/End: Complemental strand, 14907718 - 14907636
Alignment:
Q  817 atcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcatatccaa 898  Q
    |||| ||||||||||||||||||   |||||||||| ||||||| || ||||| ||||||||||||||| || |||||||||||    
T  14907718 atcatatagtttcaccatttcaagcattctcatattccaagtaatagggaaaa-acaacatctcatgataaacatcatatccaa 14907636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 817 - 898
Target Start/End: Original strand, 23819056 - 23819138
Alignment:
Q  817 atcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcatatccaa 898  Q
    |||| ||||||||||||||||||   |||||||||| ||||||| || ||||| ||||||||||||||| || |||||||||||    
T  23819056 atcatatagtttcaccatttcaagcattctcatattccaagtaatagggaaaa-acaacatctcatgataaacatcatatccaa 23819138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 224
Target Start/End: Original strand, 25593792 - 25593831
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgt 224  Q
    ||||||||||||||||||||||| | ||||||||||||||    
T  25593792 atgtatgcatgaacatatgactcgacaataatgcatatgt 25593831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 542 - 581
Target Start/End: Original strand, 25593792 - 25593831
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatgt 581  Q
    ||||||||||||||||||||||| | ||||||||||||||    
T  25593792 atgtatgcatgaacatatgactcgacaataatgcatatgt 25593831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 860 - 913
Target Start/End: Complemental strand, 22787264 - 22787210
Alignment:
Q  860 aagagaaaatacaacatctcatgataa-tatcatatccaacatttaacaattcat 913  Q
    ||||||| ||||||||||| ||||||| |||||||| |||||| |||||||||||    
T  22787264 aagagaacatacaacatcttatgataaatatcatattcaacatataacaattcat 22787210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 748 - 805
Target Start/End: Complemental strand, 24562003 - 24561946
Alignment:
Q  748 ctcacattccaagtaaagaggaaaatacatcaccttaagatgaacatcacattcaaca 805  Q
    |||||| |||||||||||  ||||||||| ||||||| ||| ||||||| ||||||||    
T  24562003 ctcacaatccaagtaaaggagaaaatacaacaccttatgataaacatcatattcaaca 24561946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 755 - 807
Target Start/End: Original strand, 25133133 - 25133186
Alignment:
Q  755 tccaagtaaag-aggaaaatacatcaccttaagatgaacatcacattcaacact 807  Q
    ||||||||||| ||||||||||| ||||||  ||| ||||||||||||||||||    
T  25133133 tccaagtaaaggaggaaaatacaacaccttgtgataaacatcacattcaacact 25133186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 136; Significance: 2e-70; HSPs: 2)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 156 - 355
Target Start/End: Original strand, 4149 - 4346
Alignment:
Q  156 atatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaat 255  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  4149 atatataaacatatccgtcatcaccaaatatgcatgcatgaacatatgactcgataataatgcatatgtccacacaacaactcaccaaatcatcaccaat 4248  T
Q  256 atttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcatc 355  Q
    ||||||||||||||||||||||| || |||||||||||||||  | ||||||||||||||||||| ||| ||||| ||||| || |||||||||||||||    
T  4249 atttatttgcatttatgcaatcacaccaataattcatcacca-atacataatcaataccatatcacaat-aacaacgtatacgggctcaccaatatcatc 4346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173; HSP #2
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 513 - 712
Target Start/End: Original strand, 4149 - 4346
Alignment:
Q  513 atatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaat 612  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  4149 atatataaacatatccgtcatcaccaaatatgcatgcatgaacatatgactcgataataatgcatatgtccacacaacaactcaccaaatcatcaccaat 4248  T
Q  613 atttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaatatcatc 712  Q
    ||||||||||||||||||||||| || |||||||||||||||  | ||||||||||||||||||| ||| ||||| ||||| || |||||||||||||||    
T  4249 atttatttgcatttatgcaatcacaccaataattcatcacca-atacataatcaataccatatcacaat-aacaacgtatacgggctcaccaatatcatc 4346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 135; Significance: 7e-70; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 129 - 363
Target Start/End: Complemental strand, 165950 - 165717
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 228  Q
    ||||||||||| |||||||||| ||||||||||||| |||| ||||  || ||   ||||||||||||||||||||||||| || ||||||||||| |||    
T  165950 atcatcaccaatatcatcaccatttggatatataaaaatatttgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 165851  T
Q  229 acaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaac 328  Q
    |||||||||||||| ||  ||||||||||||||||||||||||||||||| || |||||||||||||||  | |||||||||| |||||||| |||||||    
T  165850 acaacaactcaccaaattctcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca-atacataatcaatcccatatcacaataaac 165752  T
Q  329 aatgtatatggactcaccaatatcatcaccaatat 363  Q
    |||||||||||||||| ||||||||||||||||||    
T  165751 aatgtatatggactcatcaatatcatcaccaatat 165717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 486 - 720
Target Start/End: Complemental strand, 165950 - 165717
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 585  Q
    ||||||||||| |||||||||| ||||||||||||| ||||  | |  || ||   ||||||||||||||||||||||||| || ||||||||||| |||    
T  165950 atcatcaccaatatcatcaccatttggatatataaaaatatttgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 165851  T
Q  586 acaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaac 685  Q
    |||||||||||||| ||  ||||||||||||||||||||||||||||||| || |||||||||||||||  | |||||||||| |||||||| |||||||    
T  165850 acaacaactcaccaaattctcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca-atacataatcaatcccatatcacaataaac 165752  T
Q  686 aatgtatatggactcaccaatatcatcaccaatat 720  Q
    |||||||||||||||| ||||||||||||||||||    
T  165751 aatgtatatggactcatcaatatcatcaccaatat 165717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 599 - 720
Target Start/End: Complemental strand, 165732 - 165612
Alignment:
Q  599 atatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggac 698  Q
    ||||||||||||||||||||||||||| ||| ||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  165732 atatcatcaccaatatttatttgcatt-atgaaatcacaccggtaattcatcaccacttgcataatcaataccatatcataataaacaatgtatttggac 165634  T
Q  699 tcaccaatatcatcaccaatat 720  Q
    ||||||||||||||||||||||    
T  165633 tcaccaatatcatcaccaatat 165612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 242 - 363
Target Start/End: Complemental strand, 165732 - 165612
Alignment:
Q  242 atatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggac 341  Q
    ||||||||||||||||||||||||||| ||| ||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  165732 atatcatcaccaatatttatttgcatt-atgaaatcacaccggtaattcatcaccacttgcataatcaataccatatcataataaacaatgtatttggac 165634  T
Q  342 tcaccaatatcatcaccaatat 363  Q
    ||||||||||||||||||||||    
T  165633 tcaccaatatcatcaccaatat 165612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 134; Significance: 3e-69; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 128 - 296
Target Start/End: Original strand, 32949770 - 32949939
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaa-tatgtatgcatgaacatatgactcaataataatgcatatgtcc 226  Q
    ||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  32949770 catcatcaccaaaatcatcaccaattgaatatataaaaatatccgtcatcaccaaaatatgtatgcatgaacatatgactcaataataatgcatatgtcc 32949869  T
Q  227 acacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacc 296  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| || | ||||||||||||    
T  32949870 acacaacaactcaccatatcttcaccaatatttatttgcatttatgcaatcacaccattaattcatcacc 32949939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 485 - 653
Target Start/End: Original strand, 32949770 - 32949939
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaa-tatgtatgcatgaacatatgactcaataataatgcatatgtcc 583  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  32949770 catcatcaccaaaatcatcaccaattgaatatataaaaatatccgtcatcaccaaaatatgtatgcatgaacatatgactcaataataatgcatatgtcc 32949869  T
Q  584 acacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacc 653  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| || | ||||||||||||    
T  32949870 acacaacaactcaccatatcttcaccaatatttatttgcatttatgcaatcacaccattaattcatcacc 32949939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 129 - 355
Target Start/End: Original strand, 7527801 - 7528025
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 228  Q
    ||||||||||| |||||||||| ||||||||||||| ||||| |||  || ||   |||||||||||||||||||||||||||||||||||||| |||||    
T  7527801 atcatcaccaatatcatcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaataataatgcatatatccac 7527900  T
Q  229 acaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaac 328  Q
    |||||||||||||| ||  ||||||||| ||||||||||||||||||||| || || ||||||||||||| || |||||||  ||||||||||||| |||    
T  7527901 acaacaactcaccaaattctcaccaata-ttatttgcatttatgcaatcacaccaacaattcatcaccacatggataatcagcaccatatcataat-aac 7527998  T
Q  329 aatgtatatggactcaccaatatcatc 355  Q
    |||||||||||||||||||||||||||    
T  7527999 aatgtatatggactcaccaatatcatc 7528025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 486 - 712
Target Start/End: Original strand, 7527801 - 7528025
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 585  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||| |  || ||   |||||||||||||||||||||||||||||||||||||| |||||    
T  7527801 atcatcaccaatatcatcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaataataatgcatatatccac 7527900  T
Q  586 acaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaac 685  Q
    |||||||||||||| ||  ||||||||| ||||||||||||||||||||| || || ||||||||||||| || |||||||  ||||||||||||| |||    
T  7527901 acaacaactcaccaaattctcaccaata-ttatttgcatttatgcaatcacaccaacaattcatcaccacatggataatcagcaccatatcataat-aac 7527998  T
Q  686 aatgtatatggactcaccaatatcatc 712  Q
    |||||||||||||||||||||||||||    
T  7527999 aatgtatatggactcaccaatatcatc 7528025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 669 - 824
Target Start/End: Original strand, 25003764 - 25003919
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagagg 768  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||   |  |||||||| ||||||||||||||||||||||||||||||||||||||    
T  25003764 accatatcataacaaacaatgtatatggattcaccaatatcatcaccttcacgtaatttcatatcaaatacatgatttgctcacattccaagtaaagagg 25003863  T
Q  769 aaaatacatcaccttaagatgaacatcacattcaacactcaactatcaatcaaata 824  Q
    ||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  25003864 aaaatacgtcaccttaagataaacatcacattcaatactcaactatcaatcaaata 25003919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 669 - 824
Target Start/End: Original strand, 34938338 - 34938493
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagagg 768  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||   |  ||||||||||||||||||||||||||| ||| |||||||| ||||||    
T  34938338 accatatcataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacatcaaatacatgatttgcccactttccaagtcaagagg 34938437  T
Q  769 aaaatacatcaccttaagatgaacatcacattcaacactcaactatcaatcaaata 824  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  34938438 aaaatacatcaccttaagataaacatcacattcaacactcaactaacaatcaaata 34938493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 669 - 824
Target Start/End: Complemental strand, 23112345 - 23112189
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaat-atcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagag 767  Q
    ||||||||||||||||||||||| ||| | |||||||| |||||||||  ||  ||||||||||||| ||| ||||||||||||| |||||||| |||||    
T  23112345 accatatcataataaacaatgtagatgtattcaccaattatcatcacctttacataatttcacatcagatatatgatttgctcactttccaagtcaagag 23112246  T
Q  768 gaaaatacatcaccttaagatgaacatcacattcaacactcaactatcaatcaaata 824  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  23112245 gaaaatacatcaccttaagataaacatcacattcaacactcatctatcaatcaaata 23112189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 669 - 824
Target Start/End: Original strand, 2030728 - 2030883
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagagg 768  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||   |  |||||||||||||| ||||||||||||||||||||||||||||||||    
T  2030728 accatatcataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacatcaattacatgatttgctcacattccaagtaaagagg 2030827  T
Q  769 aaaatacatcaccttaagatgaacatcacattcaacactcaactatcaatcaaata 824  Q
    | ||||| |||||||||||| |||||| ||||| | | ||||||||||||| ||||    
T  2030828 ataatacgtcaccttaagataaacatctcattccatattcaactatcaatccaata 2030883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 669 - 824
Target Start/End: Complemental strand, 29191461 - 29191306
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagagg 768  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||   |  |||||||||||||||||||||||||||  || || ||||| ||||||    
T  29191461 accatatcataataaacaatatatatggattcaccaatatcatcaccttcacataatttcacatcaaatacatgatttgcctacttttcaagtcaagagg 29191362  T
Q  769 aaaatacatcaccttaagatgaacatcacattcaacactcaactatcaatcaaata 824  Q
    |||||||||||||||||||| |||||||||||||| ||||||||| | ||||||||    
T  29191361 aaaatacatcaccttaagataaacatcacattcaatactcaactaaccatcaaata 29191306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 129 - 297
Target Start/End: Original strand, 17908361 - 17908528
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 228  Q
    ||||||||||| |||||||||| ||||||||||||| ||||| |||  || ||   ||||||||||||||||||||||||| || ||||||||||| |||    
T  17908361 atcatcaccaatatcatcaccatttggatatataaa-atatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 17908459  T
Q  229 acaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 297  Q
    |||||||||||| | ||  |||||||||||||||||||||||||| |||| || |||||||||||||||    
T  17908460 acaacaactcacaaaattctcaccaatatttatttgcatttatgcgatcacaccaataattcatcacca 17908528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 486 - 654
Target Start/End: Original strand, 17908361 - 17908528
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 585  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||| |  || ||   ||||||||||||||||||||||||| || ||||||||||| |||    
T  17908361 atcatcaccaatatcatcaccatttggatatataaa-atatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 17908459  T
Q  586 acaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 654  Q
    |||||||||||| | ||  |||||||||||||||||||||||||| |||| || |||||||||||||||    
T  17908460 acaacaactcacaaaattctcaccaatatttatttgcatttatgcgatcacaccaataattcatcacca 17908528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 693 - 820
Target Start/End: Complemental strand, 23985633 - 23985506
Alignment:
Q  693 atggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagaggaaaatacatcaccttaagatgaac 792  Q
    ||||| |||||||||||||||||   |  ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  23985633 atggattcaccaatatcatcaccttcacataacttcatatcaaatacatgatttgctcacattccaagtaaagaggaaaatacatcaccttaagataaac 23985534  T
Q  793 atcacattcaacactcaactatcaatca 820  Q
    |||||||||||  |||||||||||||||    
T  23985533 atcacattcaattctcaactatcaatca 23985506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 245 - 355
Target Start/End: Original strand, 17908520 - 17908629
Alignment:
Q  245 tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactca 344  Q
    ||||||||||||||| |||||||||||||||||| || |||||||||||||||  | |||||||||| |||||||| |||||||||||||||| ||||||    
T  17908520 tcatcaccaatatttgtttgcatttatgcaatcacaccaataattcatcacca-atacataatcaatcccatatcacaataaacaatgtatatagactca 17908618  T
Q  345 ccaatatcatc 355  Q
     ||||||||||    
T  17908619 tcaatatcatc 17908629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 602 - 712
Target Start/End: Original strand, 17908520 - 17908629
Alignment:
Q  602 tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactca 701  Q
    ||||||||||||||| |||||||||||||||||| || |||||||||||||||  | |||||||||| |||||||| |||||||||||||||| ||||||    
T  17908520 tcatcaccaatatttgtttgcatttatgcaatcacaccaataattcatcacca-atacataatcaatcccatatcacaataaacaatgtatatagactca 17908618  T
Q  702 ccaatatcatc 712  Q
     ||||||||||    
T  17908619 tcaatatcatc 17908629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 486 - 624
Target Start/End: Complemental strand, 23985876 - 23985739
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 585  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||| |  || ||   ||||||||||||||||||||||||| || ||||||||||| |||    
T  23985876 atcatcaccaatatcatcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 23985777  T
Q  586 acaacaactcaccatatcatcaccaatatttatttgcat 624  Q
    |||||||||||||| ||  |||||| || ||||||||||    
T  23985776 acaacaactcaccaaattctcaccatta-ttatttgcat 23985739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 129 - 267
Target Start/End: Complemental strand, 23985876 - 23985739
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 228  Q
    ||||||||||| |||||||||| ||||||||||||| ||||| |||  || ||   ||||||||||||||||||||||||| || ||||||||||| |||    
T  23985876 atcatcaccaatatcatcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcac 23985777  T
Q  229 acaacaactcaccatatcatcaccaatatttatttgcat 267  Q
    |||||||||||||| ||  |||||| || ||||||||||    
T  23985776 acaacaactcaccaaattctcaccatta-ttatttgcat 23985739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 145 - 258
Target Start/End: Original strand, 2030516 - 2030629
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccata 244  Q
    |||||| ||||||||||||| |||| ||||  || ||   ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  2030516 tcaccatttggatatataaaaatatttgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccata 2030615  T
Q  245 tcatcaccaatatt 258  Q
    |  |||||||||||    
T  2030616 ttctcaccaatatt 2030629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 542 - 615
Target Start/End: Original strand, 2030556 - 2030629
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaatatt 615  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||  |||||||||||    
T  2030556 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatattctcaccaatatt 2030629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 145 - 258
Target Start/End: Original strand, 25003564 - 25003677
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccata 244  Q
    |||||| ||||||||||||| |||| ||||  || ||    |||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  25003564 tcaccatttggatatataaaaatatatgtctccatcattcgtgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccata 25003663  T
Q  245 tcatcaccaatatt 258  Q
    |  |||||||||||    
T  25003664 ttctcaccaatatt 25003677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 543 - 615
Target Start/End: Original strand, 25003605 - 25003677
Alignment:
Q  543 tgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaatatt 615  Q
    |||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||  |||||||||||    
T  25003605 tgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatattctcaccaatatt 25003677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 840 - 914
Target Start/End: Complemental strand, 20833246 - 20833171
Alignment:
Q  840 tatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattcatc 914  Q
    ||||||||| | ||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||    
T  20833246 tatttctcacaatacaagtaaagagaaaatacatcatcttatgataaatatcatatccaacatttaacaattcatc 20833171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 312 - 390
Target Start/End: Original strand, 34938338 - 34938416
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttg 390  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||   |  |||||||||||||||| |||||||||    
T  34938338 accatatcataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacatcaaatacatgatttg 34938416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 726 - 810
Target Start/End: Original strand, 32949952 - 32950035
Alignment:
Q  726 ttcacatcaaatacatgatttgctcacattccaagtaaagaggaaaatacatcaccttaagatgaacatcacattcaacactcaa 810  Q
    |||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||| ||| || ||||||||| ||||    
T  32949952 ttcatatcaaatacatgatttgctcacattccaagtaaaaaggaaagtacatcaccttgagat-aacttctcattcaacattcaa 32950035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 312 - 403
Target Start/End: Original strand, 2030728 - 2030819
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaag 403  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||   |  |||||||||||||| | ||||||||| ||  ||||||||    
T  2030728 accatatcataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacatcaattacatgatttgctcacattccaag 2030819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 312 - 390
Target Start/End: Complemental strand, 29191461 - 29191383
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttg 390  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||   |  |||||||||||||||| |||||||||    
T  29191461 accatatcataataaacaatatatatggattcaccaatatcatcaccttcacataatttcacatcaaatacatgatttg 29191383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 312 - 403
Target Start/End: Original strand, 25003764 - 25003855
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaag 403  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||   |  |||||||| ||||||| ||||||||| ||  ||||||||    
T  25003764 accatatcataacaaacaatgtatatggattcaccaatatcatcaccttcacgtaatttcatatcaaatacatgatttgctcacattccaag 25003855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 242
Target Start/End: Original strand, 34938048 - 34938146
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 242  Q
    |||||| ||||||||||||| ||||| |||  || ||   ||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||    
T  34938048 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 34938146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 502 - 599
Target Start/End: Original strand, 34938048 - 34938146
Alignment:
Q  502 tcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 599  Q
    |||||| ||||||||||||| ||||||| |  || ||   ||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||    
T  34938048 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 34938146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 817 - 913
Target Start/End: Original strand, 37982322 - 37982419
Alignment:
Q  817 atcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatatccaacatttaacaattcat 913  Q
    |||| |||||||||||| | |||| |||||||||||| ||||||| ||||| ||||||||||| ||||||| |||||||||| |||| |||||||||||    
T  37982322 atcatatagtttcaccactccaattatttctcatattccaagtaa-gagaacatacaacatcttatgataaatatcatatcctacatataacaattcat 37982419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 797 - 901
Target Start/End: Complemental strand, 10779596 - 10779494
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| ||| || |||||||||| ||||||| ||||| ||||||||||||||||  ||||||||||    
T  10779596 cattcaaca-tcaactat--atcatatagtttcaccattccaaataattctcatattccaagtaa-gagaacatacaacatctcatgacaaatatcatat 10779501  T
Q  895 ccaacat 901  Q
    |||||||    
T  10779500 ccaacat 10779494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 797 - 901
Target Start/End: Original strand, 11341498 - 11341600
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatat 894  Q
    ||||||||| ||||||||  |||| ||||||||||||||||||  |||||||||||| ||||||| ||||| ||||||||||||||||  || |||||||    
T  11341498 cattcaaca-tcaactat--atcatatagtttcaccatttcaagcatttctcatattccaagtaa-gagaacatacaacatctcatgacaaacatcatat 11341593  T
Q  895 ccaacat 901  Q
    |||||||    
T  11341594 ccaacat 11341600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 797 - 912
Target Start/End: Original strand, 11582738 - 11582851
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||||||||||| ||||| ||| |||||||||||| || ||||||||    
T  11582738 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatattacaagtaa-gagaacatataacatctcatgacaaatatcatat 11582833  T
Q  895 ccaacatttaacaattca 912  Q
    ||||||| |||| |||||    
T  11582834 ccaacatataaccattca 11582851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 817 - 913
Target Start/End: Original strand, 23492930 - 23493027
Alignment:
Q  817 atcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatatccaacatttaacaattcat 913  Q
    |||| ||||||||| || | |||| |||||||||||| ||||||| ||||| ||||||||||| ||||||| ||||||||||||||  |||||||||||    
T  23492930 atcatatagtttcatcactccaatcatttctcatattccaagtaa-gagaacatacaacatcttatgataaatatcatatccaacacataacaattcat 23493027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 797 - 912
Target Start/End: Original strand, 25425481 - 25425594
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| ||| || |||||||||| ||||||| || || |||||||||||||||| || ||||||||    
T  25425481 cattcaaca-tcaactat--atcatatagtttcaccattccaaataattctcatattccaagtaa-gataacatacaacatctcatgacaaatatcatat 25425576  T
Q  895 ccaacatttaacaattca 912  Q
    ||||||| |||| |||||    
T  25425577 ccaacatataaccattca 25425594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 798 - 912
Target Start/End: Complemental strand, 27185129 - 27185018
Alignment:
Q  798 attcaacactcaactatcaatcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcatatc 895  Q
    |||||||| ||||||||||  || ||||||||||||||||||   |||||||||| ||||||| |||||||  ||||||||||||||| ||||||||||     
T  27185129 attcaaca-tcaactatca--catatagtttcaccatttcaaacattctcatattccaagtaatagagaaa--acaacatctcatgataaatatcatatt 27185035  T
Q  896 caacatttaacaattca 912  Q
    |||||| |||| |||||    
T  27185034 caacatataaccattca 27185018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 817 - 912
Target Start/End: Complemental strand, 21074889 - 21074793
Alignment:
Q  817 atcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatatccaacatttaacaattca 912  Q
    |||| |||||||||||||| |||  | |||||||||| ||||||| ||||| |||||||||||||||| || ||||||||||||||| |||| |||||    
T  21074889 atcatatagtttcaccattccaaacaattctcatattccaagtaa-gagaacatacaacatctcatgacaaatatcatatccaacatataaccattca 21074793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 843 - 914
Target Start/End: Complemental strand, 35792524 - 35792453
Alignment:
Q  843 ttctcatattacaagtaaagagaaaatacaacatctcatgataat-atcatatccaacatttaacaattcatc 914  Q
    |||||||||| ||||||| ||||| |||||||||||||||| ||| |||||||||||||| |||| |||||||    
T  35792524 ttctcatattccaagtaa-gagaacatacaacatctcatgacaattatcatatccaacatataaccattcatc 35792453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 817 - 906
Target Start/End: Complemental strand, 4201365 - 4201275
Alignment:
Q  817 atcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcatatccaacatttaac 906  Q
    |||| ||||||||||||||||||   |||||||||| ||||||| || ||||| ||||||||||||||| |||||||||| |||||| ||||    
T  4201365 atcatatagtttcaccatttcaagcattctcatattccaagtaatagggaaaa-acaacatctcatgataaatatcatattcaacatataac 4201275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 817 - 898
Target Start/End: Original strand, 19498670 - 19498752
Alignment:
Q  817 atcaaatagtttcaccatttca-atatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaa 898  Q
    |||| |||||||||||||| || ||| |||||||||| ||||||| ||||| ||||||||||||||||| || |||||||||||    
T  19498670 atcatatagtttcaccattccagataattctcatattccaagtaa-gagaacatacaacatctcatgataaacatcatatccaa 19498752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 797 - 912
Target Start/End: Original strand, 11210 - 11323
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||  ||||||| ||||| ||||||||||||||||  ||||||||||    
T  11210 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatatcccaagtaa-gagaacatacaacatctcatgacaaatatcatat 11305  T
Q  895 ccaacatttaacaattca 912  Q
    ||||||| |||| |||||    
T  11306 ccaacatataaccattca 11323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 817 - 913
Target Start/End: Original strand, 431320 - 431417
Alignment:
Q  817 atcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatatccaacatttaacaattcat 913  Q
    |||| ||||||||| || | |||| |||||||| ||| |||||||| |||| ||||||||||| ||||||| ||||||||||||||  |||||||||||    
T  431320 atcatatagtttcatcactccaatcatttctcacattccaagtaaa-agaacatacaacatctaatgataaatatcatatccaacacataacaattcat 431417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 797 - 912
Target Start/End: Complemental strand, 1221148 - 1221035
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||| ||||||| ||||| ||| |||||||||||| || ||||||||    
T  1221148 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatattccaagtaa-gagaacatataacatctcatgacaaatatcatat 1221053  T
Q  895 ccaacatttaacaattca 912  Q
    ||||||| |||| |||||    
T  1221052 ccaacatataaccattca 1221035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 797 - 912
Target Start/End: Complemental strand, 9732083 - 9731970
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||| ||||||| ||||| ||||||||| |||||| || ||||||||    
T  9732083 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatattccaagtaa-gagaacatacaacatttcatgacaaatatcatat 9731988  T
Q  895 ccaacatttaacaattca 912  Q
    ||||||| |||| |||||    
T  9731987 ccaacatataaccattca 9731970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 797 - 912
Target Start/End: Complemental strand, 22367901 - 22367788
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||| ||||||| ||||| |||||||| ||||||| || ||||||||    
T  22367901 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatattccaagtaa-gagaacatacaacagctcatgacaaatatcatat 22367806  T
Q  895 ccaacatttaacaattca 912  Q
    ||||||| |||| |||||    
T  22367805 ccaacatataaccattca 22367788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 817 - 901
Target Start/End: Complemental strand, 25901725 - 25901640
Alignment:
Q  817 atcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgata-atatcatatccaacat 901  Q
    |||| ||||||||||||||||||   |||||||||| ||||||| || ||||| |||||||||||||||| ||||||||| ||||||    
T  25901725 atcatatagtttcaccatttcaagcattctcatattccaagtaatagggaaaa-acaacatctcatgatagatatcatattcaacat 25901640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 822 - 901
Target Start/End: Complemental strand, 110377 - 110297
Alignment:
Q  822 atagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatatccaacat 901  Q
    ||||||||||||||||||  | |||||||||| |||| || ||||| ||||||||||||||||  |||||||||||||||||    
T  110377 atagtttcaccatttcaaacaattctcatattccaaggaa-gagaacatacaacatctcatgacaaatatcatatccaacat 110297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 735 - 796
Target Start/End: Complemental strand, 16836569 - 16836509
Alignment:
Q  735 aatacatgatttgctcacattccaagtaaagaggaaaatacatcaccttaagatgaacatca 796  Q
    ||||||||| || | ||||||||||||||||||| ||||||| ||||||| |||||||||||    
T  16836569 aatacatgaatttcccacattccaagtaaagagg-aaatacaacaccttatgatgaacatca 16836509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 823 - 901
Target Start/End: Complemental strand, 1169935 - 1169857
Alignment:
Q  823 tagtttcaccatttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacat 901  Q
    |||||||||||||||||   |||||||||| ||||| |||||  || ||||||||||||||| |||||||||| ||||||    
T  1169935 tagtttcaccatttcaagcattctcatattccaagt-aagagggaaaacaacatctcatgataaatatcatattcaacat 1169857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 817 - 898
Target Start/End: Complemental strand, 21234805 - 21234723
Alignment:
Q  817 atcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcatatccaa 898  Q
    |||| ||||||||||||||||||   |||||||||| ||||||| || ||||| ||||||||||||||| || |||||||||||    
T  21234805 atcatatagtttcaccatttcaagcattctcatattccaagtaatagggaaaa-acaacatctcatgataaacatcatatccaa 21234723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 312 - 390
Target Start/End: Complemental strand, 23112345 - 23112266
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaa-tatcatcaccaatatctaatttcacatcaaatgcatgatttg 390  Q
    ||||||||||||||||||||||| ||| | ||||||| ||||||||||  ||  ||||||||||||| ||  ||||||||    
T  23112345 accatatcataataaacaatgtagatgtattcaccaattatcatcacctttacataatttcacatcagatatatgatttg 23112266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 832 - 914
Target Start/End: Original strand, 7528030 - 7528111
Alignment:
Q  832 catttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgataatatcatatccaacatttaacaattcatc 914  Q
    |||| |||||||||||||||   |||||| ||||| ||||||||  ||||| |||||||||||||||||| | | ||||||||    
T  7528030 cattacaatatttctcatatactaagtaa-gagaacatacaacacttcatgttaatatcatatccaacatatcataattcatc 7528111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 797 - 886
Target Start/End: Complemental strand, 25901634 - 25901550
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgataa 886  Q
    ||||||||| ||||||||||  || |||||||||||||| |||   |||||||||| ||||||| ||||| |||||||||||||||||||    
T  25901634 cattcaaca-tcaactatca--catatagtttcaccatt-caaggattctcatattccaagtaa-gagaacatacaacatctcatgataa 25901550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 817 - 898
Target Start/End: Original strand, 37051863 - 37051945
Alignment:
Q  817 atcaaatagtttcaccatttcaatatttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatatccaa 898  Q
    |||| |||||||||||||| |||   |||||||||| |||||||   ||||| ||||||||||||||  ||||||||||||||    
T  37051863 atcatatagtttcaccattccaagcattctcatattccaagtaataggaaaaaacaacatctcatgagaaatatcatatccaa 37051945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 797 - 906
Target Start/End: Original strand, 7424539 - 7424647
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcata 893  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||| ||||||| || ||||| ||||||||||||||| |||||||||    
T  7424539 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatattccaagtaatagggaaaa-acaacatctcatgataaatatcata 7424634  T
Q  894 tccaacatttaac 906  Q
    | |||||| ||||    
T  7424635 ttcaacatataac 7424647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 127; Significance: 4e-65; HSPs: 2)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 486 - 712
Target Start/End: Complemental strand, 7571 - 7347
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 585  Q
    |||||||||||||||||||||| ||||||||||||| ||||||  |   | ||   ||||||||||||||||||||||||||||||||||||||||||||    
T  7571 atcatcaccaaaatcatcaccatttggatatataaa-atatccatctcgatcagtcatgtatgcatgaacatatgactcaataataatgcatatgtccac 7473  T
Q  586 acaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaac 685  Q
    |||||||||||||| ||  ||||||||||  ||||||||||||||||||| |||||||| |||||||||| | ||||||||||| ||||||| |||||||    
T  7472 acaacaactcaccaaattctcaccaatatc-atttgcatttatgcaatcacacgaataaatcatcaccacatacataatcaatatcatatcacaataaac 7374  T
Q  686 aatgtatatggactcaccaatatcatc 712  Q
    |||||||||||||||||||| ||||||    
T  7373 aatgtatatggactcaccaacatcatc 7347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615; HSP #2
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 129 - 355
Target Start/End: Complemental strand, 7571 - 7347
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 228  Q
    |||||||||||||||||||||| ||||||||||||| |||||  ||   | ||   ||||||||||||||||||||||||||||||||||||||||||||    
T  7571 atcatcaccaaaatcatcaccatttggatatataaa-atatccatctcgatcagtcatgtatgcatgaacatatgactcaataataatgcatatgtccac 7473  T
Q  229 acaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaac 328  Q
    |||||||||||||| ||  ||||||||||  ||||||||||||||||||| |||||||| |||||||||| | ||||||||||| ||||||| |||||||    
T  7472 acaacaactcaccaaattctcaccaatatc-atttgcatttatgcaatcacacgaataaatcatcaccacatacataatcaatatcatatcacaataaac 7374  T
Q  329 aatgtatatggactcaccaatatcatc 355  Q
    |||||||||||||||||||| ||||||    
T  7373 aatgtatatggactcaccaacatcatc 7347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 124; Significance: 3e-63; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 485 - 655
Target Start/End: Complemental strand, 58029 - 57859
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 584  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| || ||||||||||| ||    
T  58029 catcatcaccaaa-tcagcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcattaacatatgactcaacaacaatgcatatgttca 57931  T
Q  585 cacaacaactcaccatatcatcaccaata-tttatttgcatttatgcaatcatacgaataattcatcaccac 655  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||    
T  57930 cacaacaactcaccatatcatcaccaatattttatttgcatttatgcaatcacaccaataattcatcaccac 57859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 128 - 298
Target Start/End: Complemental strand, 58029 - 57859
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    ||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || ||||||||||| ||    
T  58029 catcatcaccaaa-tcagcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcattaacatatgactcaacaacaatgcatatgttca 57931  T
Q  228 cacaacaactcaccatatcatcaccaata-tttatttgcatttatgcaatcatacgaataattcatcaccac 298  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||    
T  57930 cacaacaactcaccatatcatcaccaatattttatttgcatttatgcaatcacaccaataattcatcaccac 57859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 797 - 912
Target Start/End: Complemental strand, 155654 - 155541
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||| ||||||| ||||| ||||||||| |||||| || ||||||||    
T  155654 cattcaaca-tcaactat--atcatatagtttcaccattccaagcaattctcatattccaagtaa-gagaacatacaacatgtcatgacaaatatcatat 155559  T
Q  895 ccaacatttaacaattca 912  Q
    ||||||| |||| |||||    
T  155558 ccaacatataaccattca 155541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 120; Significance: 7e-61; HSPs: 4)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 498 - 715
Target Start/End: Complemental strand, 35322 - 35104
Alignment:
Q  498 atcatcaccaat-tggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactca 596  Q
    |||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  35322 atcatcaccaatatggatatataaacatatccgtcatcaccaattatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactca 35223  T
Q  597 ccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatca-ataccatatcataataaacaatgtatatg 695  Q
    | ||||||||||||||| ||||||||||||||||||||  || |||||||||||||||| |  ||||||| | ||||||||||||  ||| ||  |||||    
T  35222 ctatatcatcaccaataattatttgcatttatgcaatcgcaccaataattcatcaccacgtatataatcatacaccatatcataaataac-atacatatg 35124  T
Q  696 gactcaccaatatcatcacc 715  Q
    || |||||||||||||||||    
T  35123 gattcaccaatatcatcacc 35104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 141 - 358
Target Start/End: Complemental strand, 35322 - 35104
Alignment:
Q  141 atcatcaccaat-tggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactca 239  Q
    |||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  35322 atcatcaccaatatggatatataaacatatccgtcatcaccaattatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactca 35223  T
Q  240 ccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatca-ataccatatcataataaacaatgtatatg 338  Q
    | ||||||||||||||| ||||||||||||||||||||  || |||||||||||||||| |  ||||||| | ||||||||||||  ||| ||  |||||    
T  35222 ctatatcatcaccaataattatttgcatttatgcaatcgcaccaataattcatcaccacgtatataatcatacaccatatcataaataac-atacatatg 35124  T
Q  339 gactcaccaatatcatcacc 358  Q
    || |||||||||||||||||    
T  35123 gattcaccaatatcatcacc 35104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 669 - 824
Target Start/End: Complemental strand, 223368 - 223213
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagagg 768  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||  ||  ||||||||||||| ||| ||||||||| ||| |||||||| ||||||    
T  223368 accatatcataataaacaatgtatatggattcaccaatatcatcacctttacataatttcacatcagatatatgatttgcccactttccaagtcaagagg 223269  T
Q  769 aaaatacatcaccttaagatgaacatcacattcaacactcaactatcaatcaaata 824  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  223268 aaaatacatcaccttaagataaacatcacattcaacactcaactaacaatcaaata 223213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 312 - 390
Target Start/End: Complemental strand, 223368 - 223290
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttg 390  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||  ||  ||||||||||||| ||  ||||||||    
T  223368 accatatcataataaacaatgtatatggattcaccaatatcatcacctttacataatttcacatcagatatatgatttg 223290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1666 (Bit Score: 119; Significance: 3e-60; HSPs: 2)
Name: scaffold1666
Description:

Target: scaffold1666; HSP #1
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 485 - 712
Target Start/End: Complemental strand, 1071 - 832
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 584  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  1071 catcatcaccaaaatcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaagatatgaatcaataataatgcatatgtcca 972  T
Q  585 cacaacaactcaccatatcatca------------ccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaatacca 672  Q
    ||||| |||||||||||||||||            ||||||| |||||||| ||||||||||  || ||||||| |||||||  | | |||  |||||||    
T  971 cacaaaaactcaccatatcatcaccaaaatcatcaccaatatatatttgcaattatgcaatcgcaccaataatttatcaccaagtacttaaataatacca 872  T
Q  673 tatcataataaacaatgtatatggactcaccaatatcatc 712  Q
    ||||| ||||||||| |||||||||||||| || ||||||    
T  871 tatcacaataaacaaggtatatggactcactaacatcatc 832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1666; HSP #2
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 128 - 355
Target Start/End: Complemental strand, 1071 - 832
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  1071 catcatcaccaaaatcatcaccaattggatatataaacatatccgtcatcaccaaatatgtatgcatgaagatatgaatcaataataatgcatatgtcca 972  T
Q  228 cacaacaactcaccatatcatca------------ccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaatacca 315  Q
    ||||| |||||||||||||||||            ||||||| |||||||| ||||||||||  || ||||||| |||||||  | | |||  |||||||    
T  971 cacaaaaactcaccatatcatcaccaaaatcatcaccaatatatatttgcaattatgcaatcgcaccaataatttatcaccaagtacttaaataatacca 872  T
Q  316 tatcataataaacaatgtatatggactcaccaatatcatc 355  Q
    ||||| ||||||||| |||||||||||||| || ||||||    
T  871 tatcacaataaacaaggtatatggactcactaacatcatc 832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1486 (Bit Score: 111; Significance: 2e-55; HSPs: 2)
Name: scaffold1486
Description:

Target: scaffold1486; HSP #1
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 128 - 277
Target Start/End: Original strand, 1599 - 1748
Alignment:
Q  128 catcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 227  Q
    ||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || ||||||||||| ||    
T  1599 catcatcaccaaa-tcaacaccaattggatatataaacatatccgtcatcaccaaatatgtatgcattaacatatgactcaacaacaatgcatatgttca 1697  T
Q  228 cacaacaactcaccatatcatcaccaata-tttatttgcatttatgcaatc 277  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1698 cacaacaactcaccatatcatcaccaatattttatttgcatttatgcaatc 1748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1486; HSP #2
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 485 - 634
Target Start/End: Original strand, 1599 - 1748
Alignment:
Q  485 catcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtcca 584  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| || ||||||||||| ||    
T  1599 catcatcaccaaa-tcaacaccaattggatatataaacatatccgtcatcaccaaatatgtatgcattaacatatgactcaacaacaatgcatatgttca 1697  T
Q  585 cacaacaactcaccatatcatcaccaata-tttatttgcatttatgcaatc 634  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1698 cacaacaactcaccatatcatcaccaatattttatttgcatttatgcaatc 1748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 108; Significance: 1e-53; HSPs: 6)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 669 - 824
Target Start/End: Complemental strand, 9371 - 9216
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagagg 768  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||   |  ||||||||||| || | ||||||||||||||||||||||||||||||    
T  9371 accatatcataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacattaatttcatgatttgctcacattccaagtaaagagg 9272  T
Q  769 aaaatacatcaccttaagatgaacatcacattcaacactcaactatcaatcaaata 824  Q
    ||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||    
T  9271 aaaatacgtcaccttaagataaacatcacattcgacactcaactatcaatcaaata 9216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 244 - 326
Target Start/End: Original strand, 17897 - 17979
Alignment:
Q  244 atcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataa 326  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||| | |||||||||||||||||||||||||||    
T  17897 atcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacctcatgcataatcaataccatatcataataa 17979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 601 - 683
Target Start/End: Original strand, 17897 - 17979
Alignment:
Q  601 atcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataa 683  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||| | |||||||||||||||||||||||||||    
T  17897 atcatcaccaatatttatttgcatttatgcaatcacaccaataattcatcacctcatgcataatcaataccatatcataataa 17979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 502 - 615
Target Start/End: Complemental strand, 9573 - 9460
Alignment:
Q  502 tcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccata 601  Q
    |||||| ||||||||||||| ||||||| |  || | |  ||||||||||||||||| ||||||| || ||||||||||| |||||||||| ||||||||    
T  9573 tcaccatttggatatataaaaatatccgtctccatctatcatgtatgcatgaacatacgactcaacaacaatgcatatgttcacacaacaattcaccata 9474  T
Q  602 tcatcaccaatatt 615  Q
    |  |||||||||||    
T  9473 ttctcaccaatatt 9460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 145 - 258
Target Start/End: Complemental strand, 9573 - 9460
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccata 244  Q
    |||||| ||||||||||||| ||||| |||  || | |  ||||||||||||||||| ||||||| || ||||||||||| |||||||||| ||||||||    
T  9573 tcaccatttggatatataaaaatatccgtctccatctatcatgtatgcatgaacatacgactcaacaacaatgcatatgttcacacaacaattcaccata 9474  T
Q  245 tcatcaccaatatt 258  Q
    |  |||||||||||    
T  9473 ttctcaccaatatt 9460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 312 - 403
Target Start/End: Complemental strand, 9371 - 9280
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaag 403  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||   |  ||||||||||| || | ||||||||| ||  ||||||||    
T  9371 accatatcataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacattaatttcatgatttgctcacattccaag 9280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 2e-51; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 669 - 824
Target Start/End: Original strand, 32650500 - 32650655
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagagg 768  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||  ||  ||||||||||||| ||| ||||||||| ||| |||||||| |||||     
T  32650500 accatatcataataaacaatgtatatggattcaccaatatcatcacccttacataatttcacatcagatatatgatttgcccactttccaagtcaagaga 32650599  T
Q  769 aaaatacatcaccttaagatgaacatcacattcaacactcaactatcaatcaaata 824  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  32650600 aaaatacatcaccttaagataaacatcacattcaacactcatctatcaatcaaata 32650655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 817 - 914
Target Start/End: Complemental strand, 22144666 - 22144567
Alignment:
Q  817 atcaaatagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattcatc 914  Q
    |||| ||||||| |||||||||| |||||||| |||| | ||||||||||||||||||||||| ||||| ||||||||| ||||||| ||||||||||||    
T  22144666 atcatatagttttaccatttcaaatatttctcctatttcgagtaaagagaaaatacaacatcttatgatcaatatcataaccaacatctaacaattcatc 22144567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 245 - 358
Target Start/End: Original strand, 20252983 - 20253096
Alignment:
Q  245 tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatca-ataccatatcataataaacaatgtatatggactc 343  Q
    |||| ||||||||||||||||||||||||||||| || ||||||||||||||||||  ||||||| | ||||| ||||||||||| ||  | ||||| ||    
T  20252983 tcattaccaatatttatttgcatttatgcaatcacaccaataattcatcaccacttatataatcatacaccatgtcataataaac-atacacatggattc 20253081  T
Q  344 accaatatcatcacc 358  Q
    |||||| ||||||||    
T  20253082 accaatgtcatcacc 20253096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 602 - 715
Target Start/End: Original strand, 20252983 - 20253096
Alignment:
Q  602 tcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatca-ataccatatcataataaacaatgtatatggactc 700  Q
    |||| ||||||||||||||||||||||||||||| || ||||||||||||||||||  ||||||| | ||||| ||||||||||| ||  | ||||| ||    
T  20252983 tcattaccaatatttatttgcatttatgcaatcacaccaataattcatcaccacttatataatcatacaccatgtcataataaac-atacacatggattc 20253081  T
Q  701 accaatatcatcacc 715  Q
    |||||| ||||||||    
T  20253082 accaatgtcatcacc 20253096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 838 - 913
Target Start/End: Complemental strand, 8539211 - 8539135
Alignment:
Q  838 aatatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattcat 913  Q
    ||||||||||||||| ||||||||||||||||||||||  | ||||| ||||||||||||||||| |||||||||||    
T  8539211 aatatttctcatattccaagtaaagagaaaatacaacacgttatgataaatatcatatccaacatataacaattcat 8539135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 838 - 913
Target Start/End: Complemental strand, 8604450 - 8604374
Alignment:
Q  838 aatatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattcat 913  Q
    ||||||||||||||| ||||||||||||||||||||||  | ||||| ||||||||||||||||| |||||||||||    
T  8604450 aatatttctcatattccaagtaaagagaaaatacaacacgttatgataaatatcatatccaacatataacaattcat 8604374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 312 - 390
Target Start/End: Original strand, 32650500 - 32650578
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttg 390  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||  ||  ||||||||||||| ||  ||||||||    
T  32650500 accatatcataataaacaatgtatatggattcaccaatatcatcacccttacataatttcacatcagatatatgatttg 32650578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 297
Target Start/End: Original strand, 20252795 - 20252947
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaa-caactcaccat 243  Q
    |||||| ||||||||||||| ||||| |||  || ||   ||||||||||||||||||  || || || ||| ||||||| || |||| |||||||||||    
T  20252795 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatatcttaacaacaatacatatgttcatacaaacaactcaccat 20252894  T
Q  244 atcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 297  Q
    ||  ||||||||| ||| ||||||||||||||||| || |||||| ||| ||||    
T  20252895 attctcaccaata-ttacttgcatttatgcaatcacaccaataatccattacca 20252947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 502 - 654
Target Start/End: Original strand, 20252795 - 20252947
Alignment:
Q  502 tcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaa-caactcaccat 600  Q
    |||||| ||||||||||||| ||||||| |  || ||   ||||||||||||||||||  || || || ||| ||||||| || |||| |||||||||||    
T  20252795 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatatcttaacaacaatacatatgttcatacaaacaactcaccat 20252894  T
Q  601 atcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 654  Q
    ||  ||||||||| ||| ||||||||||||||||| || |||||| ||| ||||    
T  20252895 attctcaccaata-ttacttgcatttatgcaatcacaccaataatccattacca 20252947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 827 - 912
Target Start/End: Original strand, 17607851 - 17607936
Alignment:
Q  827 ttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattca 912  Q
    ||||||| |||||| |||||||||||| ||||||| ||||| ||||||||||||||||| |||||||||| |||||| ||||||||||    
T  17607851 ttcaccaattcaattatttctcatattccaagtaa-gagaacatacaacatctcatgataaatatcatat-caacatataacaattca 17607936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 20252944 - 20252991
Alignment:
Q  250 accaatatttatttgcatttatgcaatcatacgaataattcatcacca 297  Q
    ||||||||||||||||||||||||||||| || |||||||||| ||||    
T  20252944 accaatatttatttgcatttatgcaatcacaccaataattcattacca 20252991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 607 - 654
Target Start/End: Original strand, 20252944 - 20252991
Alignment:
Q  607 accaatatttatttgcatttatgcaatcatacgaataattcatcacca 654  Q
    ||||||||||||||||||||||||||||| || |||||||||| ||||    
T  20252944 accaatatttatttgcatttatgcaatcacaccaataattcattacca 20252991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 20192828 - 20192878
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaa 235  Q
    ||||||||||||||||||||||| | |||||||||||||| ||| ||||||    
T  20192828 atgtatgcatgaacatatgactcgacaataatgcatatgttcacccaacaa 20192878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 542 - 592
Target Start/End: Original strand, 20192828 - 20192878
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaa 592  Q
    ||||||||||||||||||||||| | |||||||||||||| ||| ||||||    
T  20192828 atgtatgcatgaacatatgactcgacaataatgcatatgttcacccaacaa 20192878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 797 - 912
Target Start/End: Complemental strand, 20826527 - 20826414
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||| ||||||| ||||| ||||||||| |||||| || ||||||||    
T  20826527 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatattccaagtaa-gagaacatacaacatttcatgacaaatatcatat 20826432  T
Q  895 ccaacatttaacaattca 912  Q
    ||||||| |||| |||||    
T  20826431 ccaacatataaccattca 20826414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 822 - 913
Target Start/End: Complemental strand, 5769460 - 5769367
Alignment:
Q  822 atagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattcat 913  Q
    |||||| ||||| ||||| || |||||||||| |||||||||||||||| ||||| || ||||| |||||||||| | |||| |||||| ||||    
T  5769460 atagttccaccacttcaaatacttctcatattccaagtaaagagaaaatgcaacaccttatgataaatatcatattcgacatctaacaactcat 5769367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 841 - 913
Target Start/End: Original strand, 21194077 - 21194150
Alignment:
Q  841 atttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattcat 913  Q
    |||||||||||  ||||||| ||||||||||||||  | ||||| ||||||||||||||||| || ||||||||    
T  21194077 atttctcatatcccaagtaatgagaaaatacaacactttatgataaatatcatatccaacatatatcaattcat 21194150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 841 - 913
Target Start/End: Original strand, 27673752 - 27673824
Alignment:
Q  841 atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatatccaacatttaacaattcat 913  Q
    |||||||||||| ||||||| ||||| |||| |||||| ||||||| ||||||||||||||  |||||||||||    
T  27673752 atttctcatattccaagtaa-gagaacatacgacatcttatgataaatatcatatccaacacataacaattcat 27673824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 828 - 913
Target Start/End: Complemental strand, 13378043 - 13377957
Alignment:
Q  828 tcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattcat 913  Q
    ||||||||||| | |||||||||||| ||||| ||||||| |||||||||| |||||| ||||||||||||  ||| |||||| ||||    
T  13378043 tcaccatttcatttatttctcatattccaagt-aagagaacatacaacatcacatgataaatatcatatccttcatgtaacaaatcat 13377957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 224
Target Start/End: Original strand, 25093480 - 25093519
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgt 224  Q
    ||||||||||||||||||||||| | ||||||||||||||    
T  25093480 atgtatgcatgaacatatgactcgacaataatgcatatgt 25093519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 542 - 581
Target Start/End: Original strand, 25093480 - 25093519
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatgt 581  Q
    ||||||||||||||||||||||| | ||||||||||||||    
T  25093480 atgtatgcatgaacatatgactcgacaataatgcatatgt 25093519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 20253311 - 20253357
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcacc 358  Q
    |||||||||||||||  |||||||||||| ||||||| |||||||||    
T  20253311 accatatcataataaggaatgtatatggattcaccaaaatcatcacc 20253357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 669 - 715
Target Start/End: Original strand, 20253311 - 20253357
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcacc 715  Q
    |||||||||||||||  |||||||||||| ||||||| |||||||||    
T  20253311 accatatcataataaggaatgtatatggattcaccaaaatcatcacc 20253357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 822 - 913
Target Start/End: Complemental strand, 5471669 - 5471577
Alignment:
Q  822 atagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgataat-atcatatccaacatttaacaattcat 913  Q
    |||||||||||| | ||| |||| |||||||| ||| |||||||| ||||||||| || |||||||  ||||||||||| | ||||||||||||    
T  5471669 atagtttcaccactccaaatattcctcatatt-caaataaagagataatacaacaccttatgataaacatcatatccaaaacttaacaattcat 5471577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 822 - 886
Target Start/End: Complemental strand, 20956255 - 20956191
Alignment:
Q  822 atagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgataa 886  Q
    ||||||| |||||||||| ||||||||| |||  |||||| ||||| |||||||||||||||||||    
T  20956255 atagttttaccatttcaagtatttctcacattctaagtaa-gagaacatacaacatctcatgataa 20956191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 100; Significance: 6e-49; HSPs: 5)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 673 - 824
Target Start/End: Complemental strand, 167506 - 167355
Alignment:
Q  673 tatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagaggaaaa 772  Q
    ||||||||||||||||||||||||| |||||||||||||||||   |  |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  167506 tatcataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacatcaattacatgatttgctcacattccaagtaaagaggaaaa 167407  T
Q  773 tacatcaccttaagatgaacatcacattcaacactcaactatcaatcaaata 824  Q
    |||||||||||||||| ||||||||| || | | ||||||||||||| ||||    
T  167406 tacatcaccttaagataaacatcacaatccatattcaactatcaatccaata 167355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 542 - 615
Target Start/End: Complemental strand, 167670 - 167597
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaatatt 615  Q
    ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||| |  |||||||||||    
T  167670 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccattttctcaccaatatt 167597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 185 - 258
Target Start/End: Complemental strand, 167670 - 167597
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaatatt 258  Q
    ||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||| |  |||||||||||    
T  167670 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccattttctcaccaatatt 167597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 316 - 403
Target Start/End: Complemental strand, 167506 - 167419
Alignment:
Q  316 tatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaag 403  Q
    ||||||||||||||||||||||||| |||||||||||||||||   |  |||||||||||||| | ||||||||| ||  ||||||||    
T  167506 tatcataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacatcaattacatgatttgctcacattccaag 167419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 840 - 912
Target Start/End: Complemental strand, 117863 - 117792
Alignment:
Q  840 tatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattca 912  Q
    ||||||||||||| ||||||| ||||||||| ||||||| ||||| ||||||||||||||||| |||| |||||    
T  117863 tatttctcatattccaagtaa-gagaaaatataacatct-atgatgaatatcatatccaacatgtaaccattca 117792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 96; Significance: 1e-46; HSPs: 4)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 486 - 611
Target Start/End: Complemental strand, 261 - 140
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 585  Q
    |||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||   ||||||||||||||||||||||||||||||||    
T  261 atcatcaccaaatt-atcaccaattggatatataaacatatccgtcatcaccaaatatgtatgca---acatatgactcaataataatgcatatgtccac 166  T
Q  586 acaacaactcaccatatcatcaccaa 611  Q
    ||||||||||||||||||||||||||    
T  165 acaacaactcaccatatcatcaccaa 140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191; HSP #2
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 261 - 140
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 228  Q
    |||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||   ||||||||||||||||||||||||||||||||    
T  261 atcatcaccaaatt-atcaccaattggatatataaacatatccgtcatcaccaaatatgtatgca---acatatgactcaataataatgcatatgtccac 166  T
Q  229 acaacaactcaccatatcatcaccaa 254  Q
    ||||||||||||||||||||||||||    
T  165 acaacaactcaccatatcatcaccaa 140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 486 - 519
Target Start/End: Complemental strand, 150 - 117
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatata 519  Q
    ||||||||||||||||||||||||||||||||||    
T  150 atcatcaccaaaatcatcaccaattggatatata 117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 150 - 117
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatata 162  Q
    ||||||||||||||||||||||||||||||||||    
T  150 atcatcaccaaaatcatcaccaattggatatata 117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 94; Significance: 2e-45; HSPs: 3)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 669 - 830
Target Start/End: Complemental strand, 36590 - 36429
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagagg 768  Q
    |||| ||||||||||||||||||||| ||  ||||||||||||||||  ||  ||||||||||| | ||| ||||||||| ||| |||||||| ||||||    
T  36590 accaaatcataataaacaatgtatatcgatacaccaatatcatcacctttacataatttcacattagatatatgatttgcccactttccaagtcaagagg 36491  T
Q  769 aaaatacatcaccttaagatgaacatcacattcaacactcaactatcaatcaaatagtttca 830  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||    
T  36490 aaaatacatcaccttaagataaacatcacattcaacactcatctatcaatcaaatactttca 36429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 797 - 906
Target Start/End: Complemental strand, 2875 - 2768
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||  ||||||| ||||| ||||||||||||||||  ||||||||||    
T  2875 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatatcccaagtaa-gagaacatacaacatctcatgacaaatatcatat 2780  T
Q  895 ccaacatttaac 906  Q
    ||||||| ||||    
T  2779 ccaacatataac 2768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 312 - 375
Target Start/End: Complemental strand, 36590 - 36527
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacat 375  Q
    |||| ||||||||||||||||||||| ||  ||||||||||||||||  ||  |||||||||||    
T  36590 accaaatcataataaacaatgtatatcgatacaccaatatcatcacctttacataatttcacat 36527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 92; Significance: 3e-44; HSPs: 4)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 673 - 824
Target Start/End: Complemental strand, 7304 - 7153
Alignment:
Q  673 tatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagaggaaaa 772  Q
    ||||||||||||||||||||||||| |||||||||||||||||   |  |||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  7304 tatcataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacatcaattacatgatttgctcacattccaaataaagaggaaaa 7205  T
Q  773 tacatcaccttaagatgaacatcacattcaacactcaactatcaatcaaata 824  Q
    ||| |||||||||||| ||||||||| || | | ||||||||||||| ||||    
T  7204 tacgtcaccttaagataaacatcacaatccatattcaactatcaatccaata 7153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 542 - 615
Target Start/End: Complemental strand, 7467 - 7394
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaatatt 615  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||  |||||||||||    
T  7467 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatattctcaccaatatt 7394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 185 - 258
Target Start/End: Complemental strand, 7467 - 7394
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaatatt 258  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||  |||||||||||    
T  7467 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatattctcaccaatatt 7394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 316 - 390
Target Start/End: Complemental strand, 7304 - 7230
Alignment:
Q  316 tatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttg 390  Q
    ||||||||||||||||||||||||| |||||||||||||||||   |  |||||||||||||| | |||||||||    
T  7304 tatcataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacatcaattacatgatttg 7230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 92; Significance: 3e-44; HSPs: 5)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 669 - 824
Target Start/End: Original strand, 12698 - 12853
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagagg 768  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||   |  |||||||||||||| |||||||||||||||||||| |||||||||||    
T  12698 accatatcataataaacaatgtatatggattcaccaatatcatcacctgcacataatttcacatcaattacatgatttgctcacattctaagtaaagagg 12797  T
Q  769 aaaatacatcaccttaagatgaacatcacattcaacactcaactatcaatcaaata 824  Q
    ||||||| |||||||||||| |||||| |||||   | ||||||||||||| ||||    
T  12798 aaaatacgtcaccttaagataaacatctcattccgtattcaactatcaatccaata 12853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 185 - 258
Target Start/End: Original strand, 12536 - 12609
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaatatt 258  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||  |||||||||||    
T  12536 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatattctcaccaatatt 12609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 542 - 615
Target Start/End: Original strand, 12536 - 12609
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaatatt 615  Q
    ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||  |||||||||||    
T  12536 atgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaacaactcaccatattctcaccaatatt 12609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 312 - 390
Target Start/End: Original strand, 12698 - 12776
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttg 390  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||   |  |||||||||||||| | |||||||||    
T  12698 accatatcataataaacaatgtatatggattcaccaatatcatcacctgcacataatttcacatcaattacatgatttg 12776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 822 - 912
Target Start/End: Original strand, 41592 - 41682
Alignment:
Q  822 atagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattca 912  Q
    ||||||||||||||||||   |||||||||| ||||||| || ||||  |||| |||||||||| |||||||||| |||||| |||| |||||    
T  41592 atagtttcaccatttcaagcattctcatattccaagtaatagggaaa--acaatatctcatgataaatatcatattcaacatataaccattca 41682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0833 (Bit Score: 85; Significance: 5e-40; HSPs: 4)
Name: scaffold0833
Description:

Target: scaffold0833; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 669 - 801
Target Start/End: Original strand, 2055 - 2187
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagagg 768  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||   || ||||||||| |||||||| |||||||||||||||||||||| ||| |    
T  2055 accatatcataataaacaatatatatggattcaccaatatcatcaccttcatataatttcacgtcaaatacgtgatttgctcacattccaagtagagaag 2154  T
Q  769 aaaatacatcaccttaagatgaacatcacattc 801  Q
    ||||||| |||||||||||| ||||||||||||    
T  2155 aaaatacgtcaccttaagataaacatcacattc 2187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0833; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 129 - 292
Target Start/End: Original strand, 1836 - 1997
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 228  Q
    ||||||||||| |||||||||| ||||||||||||| ||||  |||  || ||   |||||||||||||||||||||||||||||||||||||||| |||    
T  1836 atcatcaccaatatcatcaccatttggatatataaa-atattcgtctccatcagtcatgtatgcatgaacatatgactcaataataatgcatatgttcac 1934  T
Q  229 acaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcat 292  Q
    |||||||||||||| ||  ||||||||| ||||||||||||||||||||| || ||||||||||    
T  1935 acaacaactcaccaaattctcaccaata-ttatttgcatttatgcaatcacaccaataattcat 1997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0833; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 486 - 649
Target Start/End: Original strand, 1836 - 1997
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccac 585  Q
    ||||||||||| |||||||||| ||||||||||||| |||| || |  || ||   |||||||||||||||||||||||||||||||||||||||| |||    
T  1836 atcatcaccaatatcatcaccatttggatatataaa-atattcgtctccatcagtcatgtatgcatgaacatatgactcaataataatgcatatgttcac 1934  T
Q  586 acaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcat 649  Q
    |||||||||||||| ||  ||||||||| ||||||||||||||||||||| || ||||||||||    
T  1935 acaacaactcaccaaattctcaccaata-ttatttgcatttatgcaatcacaccaataattcat 1997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0833; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 312 - 408
Target Start/End: Original strand, 2055 - 2151
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaagcagag 408  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||   || ||||||||| |||||| | ||||||| ||  |||||||| ||||    
T  2055 accatatcataataaacaatatatatggattcaccaatatcatcaccttcatataatttcacgtcaaatacgtgatttgctcacattccaagtagag 2151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892 (Bit Score: 84; Significance: 2e-39; HSPs: 2)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 185 - 344
Target Start/End: Original strand, 2530 - 2687
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaa 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||| ||||||||| |||| |||||| || ||    
T  2530 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccaaattctcaccaata-ttatttgcaattatacaatcaaaccaa 2628  T
Q  285 taattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactca 344  Q
    |||||||||||||| |  |||||||  | ||||||| ||| ||||||||||||| |||||    
T  2629 taattcatcaccacataaataatcatcatcatatcacaat-aacaatgtatatgaactca 2687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 542 - 701
Target Start/End: Original strand, 2530 - 2687
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaa 641  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||| ||||||||| |||| |||||| || ||    
T  2530 atgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccaaattctcaccaata-ttatttgcaattatacaatcaaaccaa 2628  T
Q  642 taattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactca 701  Q
    |||||||||||||| |  |||||||  | ||||||| ||| ||||||||||||| |||||    
T  2629 taattcatcaccacataaataatcatcatcatatcacaat-aacaatgtatatgaactca 2687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 83; Significance: 8e-39; HSPs: 8)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 525 - 611
Target Start/End: Complemental strand, 24520 - 24434
Alignment:
Q  525 atccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaa 611  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24520 atccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaa 24434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 172 - 254
Target Start/End: Complemental strand, 24516 - 24434
Alignment:
Q  172 gtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaa 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24516 gtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacacaacaactcaccatatcatcaccaa 24434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #3
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 616 - 705
Target Start/End: Complemental strand, 24383 - 24294
Alignment:
Q  616 tatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaa 705  Q
    |||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24383 tatttgcatttatgcaatcacaccaataattcatcaccacttacataatcaataccatatcataataaacaatgtatatggactcaccaa 24294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #4
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 259 - 348
Target Start/End: Complemental strand, 24383 - 24294
Alignment:
Q  259 tatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaa 348  Q
    |||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24383 tatttgcatttatgcaatcacaccaataattcatcaccacttacataatcaataccatatcataataaacaatgtatatggactcaccaa 24294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 486 - 547
Target Start/End: Complemental strand, 24444 - 24381
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggata--tataaacatatccgccatcaccaaatatgtat 547  Q
    ||||||||||||||||||||||||||||||  |||||||||||||| ||||||| || ||||||    
T  24444 atcatcaccaaaatcatcaccaattggatatatataaacatatccgtcatcacccaacatgtat 24381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #6
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 24444 - 24381
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggata--tataaacatatctgtcatcaccaaatatgtat 190  Q
    ||||||||||||||||||||||||||||||  |||||||||||| ||||||||| || ||||||    
T  24444 atcatcaccaaaatcatcaccaattggatatatataaacatatccgtcatcacccaacatgtat 24381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 669 - 713
Target Start/End: Complemental strand, 24263 - 24219
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatca 713  Q
    |||| |||||||||||||||||||||||| |||||||||||||||    
T  24263 accacatcataataaacaatgtatatggattcaccaatatcatca 24219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 312 - 356
Target Start/End: Complemental strand, 24263 - 24219
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatca 356  Q
    |||| |||||||||||||||||||||||| |||||||||||||||    
T  24263 accacatcataataaacaatgtatatggattcaccaatatcatca 24219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 79; Significance: 2e-36; HSPs: 4)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 669 - 775
Target Start/End: Original strand, 23755 - 23861
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagagg 768  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||   |  |||||||||||||| ||||||||||||||||||||||||||||||||    
T  23755 accatatcataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacatcaattacatgatttgctcacattccaagtaaagagg 23854  T
Q  769 aaaatac 775  Q
    |||||||    
T  23855 aaaatac 23861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 312 - 403
Target Start/End: Original strand, 23755 - 23846
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgttcttattccaag 403  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||   |  |||||||||||||| | ||||||||| ||  ||||||||    
T  23755 accatatcataataaacaatgtatatggattcaccaatatcatcaccttcacataatttcacatcaattacatgatttgctcacattccaag 23846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 242
Target Start/End: Original strand, 23472 - 23563
Alignment:
Q  152 ttggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 242  Q
    ||||||||||||| ||||| |||  || ||   ||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||    
T  23472 ttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 23563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 509 - 599
Target Start/End: Original strand, 23472 - 23563
Alignment:
Q  509 ttggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 599  Q
    ||||||||||||| ||||||| |  || ||   ||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||    
T  23472 ttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 23563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 78; Significance: 8e-36; HSPs: 9)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 259 - 348
Target Start/End: Original strand, 34167 - 34256
Alignment:
Q  259 tatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaa 348  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34167 tatttgcatttatgcaatcacaccaataattcatcaccacttgcataatcaataccatatcataataaagaatgtatatggactcaccaa 34256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 616 - 705
Target Start/End: Original strand, 34167 - 34256
Alignment:
Q  616 tatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcaccaa 705  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34167 tatttgcatttatgcaatcacaccaataattcatcaccacttgcataatcaataccatatcataataaagaatgtatatggactcaccaa 34256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 748 - 824
Target Start/End: Original strand, 34650 - 34725
Alignment:
Q  748 ctcacattccaagtaaagaggaaaatacatcaccttaagatgaacatcacattcaacactcaactatcaatcaaata 824  Q
    |||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  34650 ctcatattccaagtaa-gaggaaaatacatcaccttaagataaacatcacattcaacactcaactaacaatcaaata 34725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 34108 - 34169
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtat 190  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||    
T  34108 atcatcaccaaaatcatcaccaattggatatataaacatatccatcatcaccaaacatgtat 34169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 486 - 547
Target Start/End: Original strand, 34108 - 34169
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtat 547  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||    
T  34108 atcatcaccaaaatcatcaccaattggatatataaacatatccatcatcaccaaacatgtat 34169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 486 - 529
Target Start/End: Original strand, 30159 - 30202
Alignment:
Q  486 atcatcaccaaaatcatcaccaattggatatataaacatatccg 529  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  30159 atcatcaccaaaatcatcaccaattggatatataaacatatccg 30202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 30159 - 30200
Alignment:
Q  129 atcatcaccaaaatcatcaccaattggatatataaacatatc 170  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  30159 atcatcaccaaaatcatcaccaattggatatataaacatatc 30200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 312 - 356
Target Start/End: Original strand, 34287 - 34331
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatca 356  Q
    |||| |||||||||| ||||||||||||| |||||||||||||||    
T  34287 accacatcataataaccaatgtatatggattcaccaatatcatca 34331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 669 - 713
Target Start/End: Original strand, 34287 - 34331
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatca 713  Q
    |||| |||||||||| ||||||||||||| |||||||||||||||    
T  34287 accacatcataataaccaatgtatatggattcaccaatatcatca 34331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 78; Significance: 8e-36; HSPs: 6)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 485 - 579
Target Start/End: Complemental strand, 67181 - 67085
Alignment:
Q  485 catcatcaccaaaat--catcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatat 579  Q
    |||||||||||||||  |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  67181 catcatcaccaaaatatcatcaccagttggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatat 67085  T

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Target: scaffold0029; HSP #2
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 128 - 222
Target Start/End: Complemental strand, 67181 - 67085
Alignment:
Q  128 catcatcaccaaaat--catcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatat 222  Q
    |||||||||||||||  |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  67181 catcatcaccaaaatatcatcaccagttggatatataaacatatccgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatat 67085  T

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Target: scaffold0029; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 603 - 712
Target Start/End: Complemental strand, 51086 - 50979
Alignment:
Q  603 catcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcac 702  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||  | ||||||||||||||||||| ||| ||||||||||| || |||||    
T  51086 catcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca-atacataatcaataccatatcacaat-aacaatgtatacgggctcac 50989  T
Q  703 caatatcatc 712  Q
    ||||||||||    
T  50988 caatatcatc 50979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 246 - 355
Target Start/End: Complemental strand, 51086 - 50979
Alignment:
Q  246 catcaccaatatttatttgcatttatgcaatcatacgaataattcatcaccacttgcataatcaataccatatcataataaacaatgtatatggactcac 345  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||  | ||||||||||||||||||| ||| ||||||||||| || |||||    
T  51086 catcaccaatatttatttgcatttatgcaatcacaccaataattcatcacca-atacataatcaataccatatcacaat-aacaatgtatacgggctcac 50989  T
Q  346 caatatcatc 355  Q
    ||||||||||    
T  50988 caatatcatc 50979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 575 - 654
Target Start/End: Complemental strand, 51158 - 51079
Alignment:
Q  575 catatgtccacacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 654  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| || |||||| ||||||||    
T  51158 catatgtccacacaacaactcaccaaatcatcaccaatatctatttgcatttatgcaatcacaccaataatccatcacca 51079  T

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Target: scaffold0029; HSP #6
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 218 - 297
Target Start/End: Complemental strand, 51158 - 51079
Alignment:
Q  218 catatgtccacacaacaactcaccatatcatcaccaatatttatttgcatttatgcaatcatacgaataattcatcacca 297  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| || |||||| ||||||||    
T  51158 catatgtccacacaacaactcaccaaatcatcaccaatatctatttgcatttatgcaatcacaccaataatccatcacca 51079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 70; Significance: 5e-31; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 669 - 810
Target Start/End: Original strand, 2620 - 2759
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttgctcacattccaagtaaagagg 768  Q
    |||||||||||||||||||||||||||||||||||||||||||  | | |  |  | |||| |||||||||||||||| |||||||||||||||||||||    
T  2620 accatatcataataaacaatgtatatggactcaccaatatcatttc-attcacacaattcatatcaaatacatgatttactcacattccaagtaaagagg 2718  T
Q  769 aaaatacatcaccttaagatgaacatcacattcaacactcaa 810  Q
    ||||||||||||||| |||| ||| || ||||||||| ||||    
T  2719 aaaatacatcaccttgagat-aacttctcattcaacattcaa 2759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 312 - 354
Target Start/End: Original strand, 2620 - 2662
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcat 354  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  2620 accatatcataataaacaatgtatatggactcaccaatatcat 2662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 67; Significance: 3e-29; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 722 - 824
Target Start/End: Complemental strand, 24340 - 24238
Alignment:
Q  722 taatttcacatcaaatacatgatttgctcacattccaagtaaagaggaaaatacatcaccttaagatgaacatcacattcaacactcaactatcaatcaa 821  Q
    |||||| ||||||||||||||||||||  || |||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||| | |||||    
T  24340 taattttacatcaaatacatgatttgcctactttccaagtcaagaggaaaatacatcaccttaagataaacatcacattcaacagtcaactaaccatcaa 24241  T
Q  822 ata 824  Q
    |||    
T  24240 ata 24238  T

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Target: scaffold0017 (Bit Score: 59; Significance: 2e-24; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 132 - 242
Target Start/End: Original strand, 42445 - 42554
Alignment:
Q  132 atcaccaaaatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacaca 231  Q
    ||||||||||||||||||| || ||||| |||| |||||  ||  || ||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  42445 atcaccaaaatcatcaccatttagatatgtaaa-atatccatctccatcagtcatgtatgcatgaacatatgactcaataataatgcatatgtccacaca 42543  T
Q  232 acaactcacca 242  Q
    |||||||||||    
T  42544 acaactcacca 42554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 489 - 599
Target Start/End: Original strand, 42445 - 42554
Alignment:
Q  489 atcaccaaaatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacaca 588  Q
    ||||||||||||||||||| || ||||| |||| ||||||  |  || ||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  42445 atcaccaaaatcatcaccatttagatatgtaaa-atatccatctccatcagtcatgtatgcatgaacatatgactcaataataatgcatatgtccacaca 42543  T
Q  589 acaactcacca 599  Q
    |||||||||||    
T  42544 acaactcacca 42554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 57; Significance: 3e-23; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 816 - 914
Target Start/End: Complemental strand, 12221 - 12122
Alignment:
Q  816 aatcaaatagtttcaccatttca-atatttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatatccaacatttaacaattcat 913  Q
    ||||| || ||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||| ||||    
T  12221 aatcatatggtttcaccattacacatatttctcatattacaagtaa-gagaaaatacaacatctcatgattaatatcatatccaacatctaacaaatcat 12123  T

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Target: scaffold0175 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 822 - 914
Target Start/End: Complemental strand, 6414 - 6320
Alignment:
Q  822 atagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattcatc 914  Q
    |||||||||||||| |||| |||||||||||| ||||||| ||||||| ||||||||| ||||| ||||||||||||||||| ||||||||||||    
T  6414 atagtttcaccattccaattatttctcatattgcaagtaacgagaaaacacaacatcttatgatcaatatcatatccaacatctaacaattcatc 6320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786 (Bit Score: 54; Significance: 2e-21; HSPs: 2)
Name: scaffold0786
Description:

Target: scaffold0786; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 817 - 901
Target Start/End: Original strand, 581 - 666
Alignment:
Q  817 atcaaatagtttcaccatttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacat 901  Q
    |||| |||||||||||||| ||||||||||||||||| |||||||||||||| | |||| |||||||| |||||||||||||||||    
T  581 atcatatagtttcaccattccaatatttctcatattataagtaaagagaaaacaaaacacctcatgataaatatcatatccaacat 666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 817 - 901
Target Start/End: Original strand, 5636 - 5721
Alignment:
Q  817 atcaaatagtttcaccatttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacat 901  Q
    |||| |||||||||||||| ||||||||||||||||| |||||||||||||| | |||| |||||||| |||||||||||||||||    
T  5636 atcatatagtttcaccattccaatatttctcatattataagtaaagagaaaacaaaacacctcatgataaatatcatatccaacat 5721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 817 - 901
Target Start/End: Original strand, 4169 - 4254
Alignment:
Q  817 atcaaatagtttcaccatttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacat 901  Q
    |||| |||||||||||||| ||||||||||||||||| |||||||||||||| | |||| |||||||| |||||||||||||||||    
T  4169 atcatatagtttcaccattccaatatttctcatattataagtaaagagaaaacaaaacacctcatgataaatatcatatccaacat 4254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 52; Significance: 3e-20; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 817 - 914
Target Start/End: Original strand, 10490 - 10588
Alignment:
Q  817 atcaaatagtttcaccatttca-atatttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatatccaacatttaacaattcatc 914  Q
    |||| |||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||| || ||||||| |||||||||| |||||| |||||    
T  10490 atcatatagtttcaccattccacatatttctcatattacaagt-aagagaaaatacaacatctcacgattaatatcctatccaacatctaacaaatcatc 10588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 52; Significance: 3e-20; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 817 - 914
Target Start/End: Original strand, 78570 - 78667
Alignment:
Q  817 atcaaatagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatatccaacatttaacaattcatc 914  Q
    |||| |||||||||||| ||||| ||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||| | ||||||||||    
T  78570 atcatatagtttcaccaattcaaatatttctcatatttcaagtaa-gagaaaatacaacatctcatgataattatcatatccaacatct-acaattcatc 78667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 797 - 912
Target Start/End: Complemental strand, 90183 - 90070
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||| ||||||| ||||| |||||||||||||||| || ||||||||    
T  90183 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatattccaagtaa-gagaacatacaacatctcatgacaaatatcatat 90088  T
Q  895 ccaacatttaacaattca 912  Q
    ||||||| |||| |||||    
T  90087 ccaacatataaccattca 90070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 797 - 898
Target Start/End: Original strand, 129246 - 129345
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatga-taatatcatat 894  Q
    ||||||||| ||||||||||  || ||||||||||||||||||  | |||||||||| ||||||| ||||| ||||||||||||||||  ||||||||||    
T  129246 cattcaaca-tcaactatca--catatagtttcaccatttcaaacaattctcatattccaagtaa-gagaacatacaacatctcatgacaaatatcatat 129341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 51; Significance: 1e-19; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 817 - 913
Target Start/End: Complemental strand, 23745 - 23648
Alignment:
Q  817 atcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatatccaacatttaacaattcat 913  Q
    |||| |||||||||||| |||||| |||||||||||| ||||||| ||||| ||||||||||| ||||||| ||||||||||||||| |||||||||||    
T  23745 atcagatagtttcaccacttcaattatttctcatattccaagtaa-gagaacatacaacatcttatgataaatatcatatccaacatataacaattcat 23648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 838 - 913
Target Start/End: Original strand, 84496 - 84572
Alignment:
Q  838 aatatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattcat 913  Q
    ||||||||||||||| |||||||||||||||||||| | || ||||| ||||||||||||||||| ||| |||||||    
T  84496 aatatttctcatatttcaagtaaagagaaaatacaataccttatgataaatatcatatccaacatataataattcat 84572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 669 - 747
Target Start/End: Original strand, 1408 - 1486
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatacatgatttg 747  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||  ||  ||||||||||||| ||| ||||||||    
T  1408 accatatcataataaacaatgtatatcgatacaccaatatcatcacccttacataatttcacatcagatatatgatttg 1486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 312 - 391
Target Start/End: Original strand, 1408 - 1487
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatcaccaatatctaatttcacatcaaatgcatgatttgt 391  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||  ||  ||||||||||||| ||  |||||||||    
T  1408 accatatcataataaacaatgtatatcgatacaccaatatcatcacccttacataatttcacatcagatatatgatttgt 1487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 9)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 242
Target Start/End: Original strand, 27918 - 28016
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 242  Q
    |||||| ||||||||||||| ||||| |||  || ||   ||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||    
T  27918 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 28016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 502 - 599
Target Start/End: Original strand, 27918 - 28016
Alignment:
Q  502 tcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 599  Q
    |||||| ||||||||||||| ||||||| |  || ||   ||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||    
T  27918 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 28016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 242
Target Start/End: Original strand, 39914 - 40012
Alignment:
Q  145 tcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 242  Q
    |||||| ||||||||||||| ||||| |||  || ||   ||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||    
T  39914 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 40012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 502 - 599
Target Start/End: Original strand, 39914 - 40012
Alignment:
Q  502 tcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcacca 599  Q
    |||||| ||||||||||||| ||||||| |  || ||   ||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||    
T  39914 tcaccatttggatatataaaaatatccgtctccatcagtcatgtatgcatgaacatatgactcaacaacaatgcatatgttcacacaaacaactcacca 40012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 312 - 356
Target Start/End: Original strand, 28214 - 28258
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatca 356  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  28214 accatatcataataaacaatgtatatggattcaccaatatcatca 28258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #6
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 669 - 713
Target Start/End: Original strand, 28214 - 28258
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatca 713  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  28214 accatatcataataaacaatgtatatggattcaccaatatcatca 28258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #7
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 312 - 356
Target Start/End: Original strand, 40210 - 40254
Alignment:
Q  312 accatatcataataaacaatgtatatggactcaccaatatcatca 356  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  40210 accatatcataataaacaatgtatatggattcaccaatatcatca 40254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #8
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 669 - 713
Target Start/End: Original strand, 40210 - 40254
Alignment:
Q  669 accatatcataataaacaatgtatatggactcaccaatatcatca 713  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  40210 accatatcataataaacaatgtatatggattcaccaatatcatca 40254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #9
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 838 - 895
Target Start/End: Complemental strand, 23681 - 23623
Alignment:
Q  838 aatatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatc 895  Q
    |||||||||||||| |||||||||||| |||||   ||||||||||| |||||||||||    
T  23681 aatatttctcatataacaagtaaagagtaaatatgtcatctcatgataaatatcatatc 23623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 542 - 607
Target Start/End: Complemental strand, 247333 - 247267
Alignment:
Q  542 atgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcaccatatcatca 607  Q
    ||||||||||||||||||||||||| || ||||||||||||||||| ||||| |||||| |||||||    
T  247333 atgtatgcatgaacatatgactcaacaacaatgcatatgtccacacaaacaattcaccacatcatca 247267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 247333 - 247267
Alignment:
Q  185 atgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactcaccatatcatca 250  Q
    ||||||||||||||||||||||||| || ||||||||||||||||| ||||| |||||| |||||||    
T  247333 atgtatgcatgaacatatgactcaacaacaatgcatatgtccacacaaacaattcaccacatcatca 247267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 823 - 913
Target Start/End: Original strand, 32469 - 32560
Alignment:
Q  823 tagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattcat 913  Q
    ||||||||||||||||| ||||||||| |||  |||||| ||||| ||||||||||||||||| |||||||||| |||||  |||||||||||    
T  32469 tagtttcaccatttcaagtatttctcacattctaagtaa-gagaacatacaacatctcatgataaatatcatattcaacacataacaattcat 32560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 843 - 913
Target Start/End: Original strand, 130809 - 130879
Alignment:
Q  843 ttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatatccaacatttaacaattcat 913  Q
    |||||||||| ||||||| |||||||||||||| | |||||||| |||||||||||||| ||||||||||||    
T  130809 ttctcatatttcaagtaa-gagaaaatacaacaccccatgataaatatcatatccaacaattaacaattcat 130879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 817 - 909
Target Start/End: Complemental strand, 24883 - 24789
Alignment:
Q  817 atcaaatagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaat 909  Q
    |||| |||||||||||| | ||| ||||| ||||||| ||||||| |||||||||||||| |||||||| ||||| |||| |||||| |||||||    
T  24883 atcatatagtttcaccactccaaatatttatcatatttcaagtaacgagaaaatacaacacctcatgataaatattatattcaacatataacaat 24789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 817 - 913
Target Start/End: Complemental strand, 98440 - 98344
Alignment:
Q  817 atcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattcat 913  Q
    |||| |||||||||||| | |||| |||||||||||| ||||||| ||||| ||||||||||| ||||| |||||||||| |||||| |||||||||||    
T  98440 atcatatagtttcaccactccaattatttctcatattccaagtaa-gagaacatacaacatcttatgataaatatcatat-caacatataacaattcat 98344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 817 - 895
Target Start/End: Original strand, 30008 - 30087
Alignment:
Q  817 atcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatc 895  Q
    |||| |||||||||||| | |||| |||||||||||| ||||||| ||||| ||||||||||||||||| |||||||||||    
T  30008 atcatatagtttcaccactccaattatttctcatattccaagtaa-gagaacatacaacatctcatgataaatatcatatc 30087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 735 - 806
Target Start/End: Complemental strand, 4069 - 3999
Alignment:
Q  735 aatacatgatttgctcacattccaagtaaagaggaaaatacatcaccttaagatgaacatcacattcaacac 806  Q
    ||||||||| || | ||||||||||||||||||| ||||||  ||||||| ||||||||||| |||||||||    
T  4069 aatacatgaatttcccacattccaagtaaagagg-aaataccacaccttatgatgaacatcatattcaacac 3999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 35; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 497 - 602
Target Start/End: Complemental strand, 9623 - 9517
Alignment:
Q  497 aatcatcaccaattggatatataaacatatccgccatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactc 595  Q
    ||||||||||| ||||||||||||| |||| |  |  || ||   |||||||||||||| ||||||||||  | ||||||||||| ||||| ||||||||    
T  9623 aatcatcaccatttggatatataaaaatatacatctccatcagtcatgtatgcatgaacgtatgactcaacgacaatgcatatgttcacacaaacaactc 9524  T
Q  596 accatat 602  Q
    |||||||    
T  9523 accatat 9517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 245
Target Start/End: Complemental strand, 9623 - 9517
Alignment:
Q  140 aatcatcaccaattggatatataaacatatctgtcatcaccaaatatgtatgcatgaacatatgactcaataataatgcatatgtccacac-aacaactc 238  Q
    ||||||||||| ||||||||||||| ||||   ||  || ||   |||||||||||||| ||||||||||  | ||||||||||| ||||| ||||||||    
T  9623 aatcatcaccatttggatatataaaaatatacatctccatcagtcatgtatgcatgaacgtatgactcaacgacaatgcatatgttcacacaaacaactc 9524  T
Q  239 accatat 245  Q
    |||||||    
T  9523 accatat 9517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 838 - 895
Target Start/End: Original strand, 4940 - 4998
Alignment:
Q  838 aatatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatc 895  Q
    |||||||||||||| ||||||||||||||||||   ||||||||||| |||||||||||    
T  4940 aatatttctcatataacaagtaaagagaaaatatgtcatctcatgataaatatcatatc 4998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 797 - 912
Target Start/End: Complemental strand, 15163 - 15050
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||| ||||||| ||||| ||||||||| |||||| || ||||||||    
T  15163 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatattccaagtaa-gagaacatacaacatttcatgacaaatatcatat 15068  T
Q  895 ccaacatttaacaattca 912  Q
    ||||||| |||| |||||    
T  15067 ccaacatataaccattca 15050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 840 - 913
Target Start/End: Original strand, 85328 - 85402
Alignment:
Q  840 tatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattcat 913  Q
    |||||||||||||  || ||||||||||||| ||||  ||||||| ||||||||||||||||  |||||||||||    
T  85328 tatttctcatattcaaattaaagagaaaatataacaagtcatgataaatatcatatccaacacctaacaattcat 85402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 797 - 912
Target Start/End: Original strand, 6040 - 6153
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||  ||||||| ||||| |||||||||||||||| || ||||||||    
T  6040 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatatcccaagtaa-gagaacatacaacatctcatgacaattatcatat 6135  T
Q  895 ccaacatttaacaattca 912  Q
    ||||||| |||| |||||    
T  6136 ccaacatataaccattca 6153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 797 - 906
Target Start/End: Complemental strand, 2430 - 2324
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcatat 894  Q
    ||||||||| ||||||||||  || ||||||||||||||||||   |||||||||| ||||||| || ||||  ||||||||||||||| ||||||||||    
T  2430 cattcaaca-tcaactatca--catatagtttcaccatttcaagcattctcatattccaagtaatagggaaa--acaacatctcatgataaatatcatat 2336  T
Q  895 ccaacatttaac 906  Q
     |||||| ||||    
T  2335 tcaacatataac 2324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 797 - 898
Target Start/End: Original strand, 78415 - 78513
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgataat-atcatat 894  Q
    ||||||||| ||||||||||  || ||||||||||||||||||   |||||||||| ||||||| || ||||  |||||||||||||||||| |||||||    
T  78415 cattcaaca-tcaactatca--catatagtttcaccatttcaagcattctcatattccaagtaatagggaaa--acaacatctcatgataatcatcatat 78509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 817 - 906
Target Start/End: Complemental strand, 1549 - 1459
Alignment:
Q  817 atcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatatccaacatttaac 906  Q
    |||| |||||||||||||| |||  | |||||||||| ||||||| || || |||||||||||||||| || ||||||||||||||| ||||    
T  1549 atcatatagtttcaccattccaaacaattctcatattccaagtaa-gataacatacaacatctcatgacaaatatcatatccaacatataac 1459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 232
Target Start/End: Original strand, 20754 - 20797
Alignment:
Q  189 atgcatgaacatatgactcaataataatgcatatgtccacacaa 232  Q
    ||||||||||||||||||||| || ||||||||||| |||||||    
T  20754 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 20797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 546 - 589
Target Start/End: Original strand, 20754 - 20797
Alignment:
Q  546 atgcatgaacatatgactcaataataatgcatatgtccacacaa 589  Q
    ||||||||||||||||||||| || ||||||||||| |||||||    
T  20754 atgcatgaacatatgactcaacaacaatgcatatgttcacacaa 20797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 817 - 898
Target Start/End: Original strand, 25780 - 25862
Alignment:
Q  817 atcaaatagtttcaccatttcaatatttctcatattacaagtaa-agagaaaatacaacatctcatgat-aatatcatatccaa 898  Q
    |||| ||||||||||||||||||   |||||||||| ||||||| || ||||| ||||||||||||||| || |||||||||||    
T  25780 atcatatagtttcaccatttcaagcattctcatattccaagtaatagggaaaa-acaacatctcatgataaacatcatatccaa 25862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 822 - 895
Target Start/End: Complemental strand, 78110 - 78036
Alignment:
Q  822 atagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatc 895  Q
    |||||||||||| |||||| |||||||||||| ||||| ||| ||| |||||||||| |||||| |||||||||||    
T  78110 atagtttcaccacttcaattatttctcatattccaagt-aagggaacatacaacatcacatgataaatatcatatc 78036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 817 - 913
Target Start/End: Complemental strand, 3576 - 3479
Alignment:
Q  817 atcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattcat 913  Q
    |||| ||||||||| || | |||| |||| ||||||| ||||||| ||||| ||||||||||| ||||| |||||||||||||||   |||||||||||    
T  3576 atcatatagtttcatcactccaatcatttgtcatattccaagtaa-gagaacatacaacatcttatgataaatatcatatccaactcataacaattcat 3479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 797 - 901
Target Start/End: Original strand, 28747 - 28848
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaatatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatc 895  Q
    ||||||||| ||||||||||  || |||||||||||| |||||   |||||||||| ||||| |||||  || ||||||||||||||| ||||||||||     
T  28747 cattcaaca-tcaactatca--catatagtttcaccaattcaaacattctcatattccaagt-aagagggaaaacaacatctcatgataaatatcatatt 28842  T
Q  896 caacat 901  Q
    ||||||    
T  28843 caacat 28848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 817 - 886
Target Start/End: Original strand, 12350 - 12419
Alignment:
Q  817 atcaaatagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgataa 886  Q
    |||| |||||||||||| | ||| ||||||||||||| ||||| ||||||| ||||||||||| |||||||    
T  12350 atcatatagtttcaccactccaaatatttctcatattccaagt-aagagaacatacaacatcttatgataa 12419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 797 - 912
Target Start/End: Complemental strand, 38630 - 38517
Alignment:
Q  797 cattcaacactcaactatcaatcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatat 894  Q
    ||||||||| ||||||||  |||| |||||||||||||| |||  | |||||||||  ||||||| ||||| ||||||||||| |||| || ||||||||    
T  38630 cattcaaca-tcaactat--atcatatagtttcaccattccaaacaattctcatatcccaagtaa-gagaacatacaacatcttatgacaaatatcatat 38535  T
Q  895 ccaacatttaacaattca 912  Q
    ||||||| |||| |||||    
T  38534 ccaacatataaccattca 38517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 748 - 806
Target Start/End: Original strand, 4889 - 4947
Alignment:
Q  748 ctcacattccaagtaaagaggaaaatacatcaccttaagatgaacatcacattcaacac 806  Q
    |||||| |||||||||||  ||||||||| ||||||| ||| ||||||| |||||||||    
T  4889 ctcacaatccaagtaaaggagaaaatacaacaccttatgataaacatcatattcaacac 4947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 817 - 913
Target Start/End: Complemental strand, 91127 - 91030
Alignment:
Q  817 atcaaatagtttcaccatttcaat-atttctcatattacaagtaaagagaaaatacaacatctcatgataa-tatcatatccaacatttaacaattcat 913  Q
    |||| ||||||||| || | |||| |||||||||||| || |||| || || ||||||||||| ||||||| ||||||||||||||  |||||||||||    
T  91127 atcatatagtttcatcactccaatcatttctcatattccaggtaa-gaaaacatacaacatcttatgataaatatcatatccaacacataacaattcat 91030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 841 - 909
Target Start/End: Original strand, 68429 - 68496
Alignment:
Q  841 atttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaat 909  Q
    |||||||||||| ||||||| ||||| ||||||||||| ||||| |||||||||| |||||| |||||||    
T  68429 atttctcatatttcaagtaa-gagaacatacaacatcttatgataaatatcatat-caacatgtaacaat 68496  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 822 - 913
Target Start/End: Complemental strand, 198633 - 198542
Alignment:
Q  822 atagtttcaccatttcaa-tatttctcatattacaagtaaagagaaaatacaacatctcatgat-aatatcatatccaacatttaacaattcat 913  Q
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T  198633 atagtttcaccactccaaatatttctcatattccaagt-aagagaacatacaacattttatgataaatatcatat-caacatacaacaattcat 198542  T

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