View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0713_low_50 (Length: 264)
Name: NF0713_low_50
Description: NF0713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0713_low_50 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 27 - 264
Target Start/End: Original strand, 34489095 - 34489332
Alignment:
| Q |
27 |
atcaaccttcagatacagaatcttccaagcaaccaccacaatctcatcattctcaccttttttcctcttcaaccaaaaacgatggaaaaaacccaccatt |
126 |
Q |
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| T |
34489095 |
atcaaccttcagatacagaatcttccaagcaaccaccacaatctcatcattctcaccttttttcctcttcaaccaaaaacgatggaaaaaacccaccatt |
34489194 |
T |
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| Q |
127 |
tccgcacaaacccgtttagaagaccgaataagagacacccactttgacaaattaacaacccacttcaaaaaactcagccttgttctcaaaacccgcaacc |
226 |
Q |
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| T |
34489195 |
tcagcacaaacccgtttagaagaccgaataagagacacccactttgacaaattaacaacccacttcaaaaaactcagccttgttctcaaaacccgcaacc |
34489294 |
T |
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| Q |
227 |
tcatatcaaatcgaaaacgtggttcttttgtctctctt |
264 |
Q |
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| T |
34489295 |
tcatatcaaatcgaaaacgtggttcttttgtctctctt |
34489332 |
T |
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