View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0714_high_25 (Length: 251)
Name: NF0714_high_25
Description: NF0714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0714_high_25 |
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Alignment Details
Target: chr1 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 11 - 250
Target Start/End: Original strand, 48820964 - 48821203
Alignment:
| Q |
11 |
cacagacctagtgtcttgataatttatgaagtttatgaaaacttagatataactatcagcactgctaaatttctctattcatcgttcttactagaatttt |
110 |
Q |
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| T |
48820964 |
cacagacctagtgtcttgataatttatgaagtttatgaaaacttagatataactatcagcactgctaaatttctctattcatcgttcttactagaatttt |
48821063 |
T |
|
| Q |
111 |
atagctgataaggtttatccagccttaattcgctcatttgggttcatctgttgatgaaccaatcaatagtagtggtgcatatgtatgcattctattcttg |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48821064 |
atagctgataaggtttatccagccttaattcgctcatttgggttcatctgttgatgaaccaatcaatagtagtggtgcatatgtatgcattctattcttg |
48821163 |
T |
|
| Q |
211 |
gaggctgttgtcaccatttgacaaataatatatagttaat |
250 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
48821164 |
gaggctgttgtcaccatttgacaaataatatatagttaat |
48821203 |
T |
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