View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0714_high_32 (Length: 226)
Name: NF0714_high_32
Description: NF0714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0714_high_32 |
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Alignment Details
Target: chr8 (Bit Score: 139; Significance: 7e-73; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 7871570 - 7871428
Alignment:
| Q |
1 |
tggattcatgagttttttccctatgatttagttagtcatggttgtgttgaaatatgctgcatactggtgcagtatcttgtaattttggcagtagtggcat |
100 |
Q |
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| T |
7871570 |
tggattcatgagttttttccctatgatttagttagtcatggttgtgttgaaatatgctgcatactggtgcagtatcttgtaattttggcagtagtggcat |
7871471 |
T |
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| Q |
101 |
tctttttacgcgtttttactttggtttacttgtgtgatgatgt |
143 |
Q |
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| T |
7871470 |
tctttttatgcgtttttactttggtttacttgtgtgatgatgt |
7871428 |
T |
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