View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0714_low_22 (Length: 395)

Name: NF0714_low_22
Description: NF0714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0714_low_22
NF0714_low_22
[»] chr2 (45 HSPs)
chr2 (9-319)||(14906280-14906590)
chr2 (9-319)||(23820184-23820494)
chr2 (9-319)||(19689241-19689551)
chr2 (9-319)||(20015124-20015434)
chr2 (9-316)||(17396493-17396799)
chr2 (17-316)||(25265236-25265537)
chr2 (38-300)||(462870-463120)
chr2 (82-317)||(7507756-7507992)
chr2 (38-316)||(36982319-36982588)
chr2 (38-316)||(8891358-8891626)
chr2 (168-316)||(19794703-19794851)
chr2 (169-316)||(20627313-20627460)
chr2 (170-316)||(24341390-24341536)
chr2 (170-316)||(43642958-43643104)
chr2 (9-139)||(12641485-12641615)
chr2 (9-266)||(12728559-12728805)
chr2 (9-266)||(34824642-34824888)
chr2 (14-139)||(8944129-8944254)
chr2 (9-117)||(12635711-12635819)
chr2 (9-120)||(23774438-23774549)
chr2 (9-117)||(3798446-3798554)
chr2 (40-115)||(9652753-9652828)
chr2 (38-115)||(22863235-22863312)
chr2 (181-316)||(19886661-19886796)
chr2 (41-151)||(33128335-33128446)
chr2 (38-137)||(24341264-24341365)
chr2 (38-115)||(21273904-21273980)
chr2 (29-114)||(32466177-32466261)
chr2 (37-139)||(16935876-16935978)
chr2 (37-139)||(17006536-17006638)
chr2 (41-116)||(28031092-28031167)
chr2 (72-139)||(42177875-42177942)
chr2 (83-115)||(22284278-22284310)
chr2 (84-139)||(11231256-11231311)
chr2 (41-151)||(17204622-17204733)
chr2 (84-139)||(22513103-22513158)
chr2 (84-139)||(24685699-24685754)
chr2 (84-115)||(25213372-25213403)
chr2 (84-139)||(28775725-28775780)
chr2 (41-114)||(21142203-21142276)
chr2 (185-265)||(24884852-24884933)
chr2 (186-265)||(68158-68238)
chr2 (83-115)||(19794629-19794661)
chr2 (83-115)||(20627238-20627270)
chr2 (83-115)||(22275045-22275077)
[»] scaffold0141 (2 HSPs)
scaffold0141 (9-319)||(22653-22963)
scaffold0141 (9-319)||(26908-27218)
[»] chr8 (48 HSPs)
chr8 (9-319)||(5238200-5238510)
chr8 (9-319)||(24661088-24661398)
chr8 (9-319)||(43685659-43685969)
chr8 (9-319)||(22907054-22907364)
chr8 (15-301)||(17345700-17345987)
chr8 (38-316)||(43373347-43373615)
chr8 (169-316)||(16193716-16193863)
chr8 (38-316)||(24928671-24928938)
chr8 (169-316)||(16404975-16405122)
chr8 (181-316)||(6774258-6774393)
chr8 (185-316)||(21844576-21844707)
chr8 (181-316)||(24549098-24549233)
chr8 (185-316)||(21851969-21852100)
chr8 (9-139)||(16872894-16873024)
chr8 (38-115)||(24385607-24385684)
chr8 (181-316)||(30120839-30120974)
chr8 (181-316)||(16674392-16674527)
chr8 (38-115)||(16193598-16193674)
chr8 (38-115)||(41506664-41506741)
chr8 (38-114)||(7000475-7000551)
chr8 (41-116)||(21494314-21494389)
chr8 (41-139)||(13662140-13662238)
chr8 (41-139)||(13720803-13720901)
chr8 (41-115)||(22886654-22886728)
chr8 (41-196)||(2545183-2545339)
chr8 (37-266)||(22006129-22006347)
chr8 (41-151)||(3431134-3431245)
chr8 (185-265)||(26011660-26011741)
chr8 (244-316)||(222754-222826)
chr8 (244-316)||(736377-736449)
chr8 (244-316)||(860272-860344)
chr8 (83-115)||(24716762-24716794)
chr8 (84-139)||(271278-271333)
chr8 (84-139)||(644587-644642)
chr8 (84-139)||(830322-830377)
chr8 (84-139)||(15319077-15319132)
chr8 (84-139)||(15499446-15499501)
chr8 (175-266)||(16195398-16195489)
chr8 (185-239)||(23226076-23226131)
chr8 (146-196)||(18612643-18612693)
chr8 (146-196)||(22147675-22147725)
chr8 (72-117)||(16674296-16674341)
chr8 (185-226)||(23149985-23150026)
chr8 (83-115)||(274766-274798)
chr8 (83-115)||(641051-641083)
chr8 (83-115)||(826857-826889)
chr8 (186-265)||(17285370-17285450)
chr8 (81-117)||(24549283-24549319)
[»] chr7 (54 HSPs)
chr7 (9-319)||(15441404-15441714)
chr7 (9-319)||(30261969-30262279)
chr7 (9-319)||(11516340-11516649)
chr7 (9-319)||(7293129-7293439)
chr7 (9-315)||(25292179-25292484)
chr7 (9-211)||(14113829-14114031)
chr7 (9-211)||(14423480-14423681)
chr7 (17-316)||(13321131-13321433)
chr7 (41-300)||(47480902-47481162)
chr7 (38-316)||(16211882-16212148)
chr7 (38-316)||(11580616-11580886)
chr7 (38-316)||(36052780-36053048)
chr7 (37-316)||(13036892-13037161)
chr7 (175-316)||(18253841-18253982)
chr7 (187-316)||(16478968-16479097)
chr7 (169-297)||(3060101-3060229)
chr7 (185-316)||(13572793-13572924)
chr7 (9-139)||(13758653-13758783)
chr7 (181-316)||(10989526-10989661)
chr7 (181-316)||(13911024-13911159)
chr7 (175-300)||(2437590-2437715)
chr7 (38-115)||(42056143-42056220)
chr7 (40-115)||(2029244-2029319)
chr7 (40-115)||(3049905-3049980)
chr7 (168-297)||(295965-296094)
chr7 (38-115)||(25124450-25124527)
chr7 (38-115)||(2190040-2190117)
chr7 (40-266)||(18979895-18980110)
chr7 (40-139)||(15927851-15927950)
chr7 (37-139)||(15759985-15760087)
chr7 (42-266)||(15950667-15950880)
chr7 (175-265)||(48622664-48622754)
chr7 (41-114)||(10000245-10000318)
chr7 (40-117)||(13572979-13573056)
chr7 (74-139)||(14250806-14250871)
chr7 (38-115)||(15709469-15709546)
chr7 (185-265)||(16914928-16915009)
chr7 (41-151)||(371380-371491)
chr7 (84-139)||(7823011-7823066)
chr7 (84-139)||(7830322-7830377)
chr7 (84-139)||(27101555-27101610)
chr7 (84-139)||(27108903-27108958)
chr7 (84-139)||(27176716-27176771)
chr7 (84-139)||(38783647-38783702)
chr7 (38-115)||(36024452-36024530)
chr7 (185-265)||(9611474-9611555)
chr7 (185-265)||(9839045-9839126)
chr7 (41-114)||(48622541-48622614)
chr7 (83-115)||(126738-126770)
chr7 (186-265)||(13377695-13377775)
chr7 (87-115)||(15516765-15516793)
chr7 (38-86)||(17817315-17817363)
chr7 (38-86)||(19049638-19049686)
chr7 (83-115)||(32493946-32493978)
[»] chr5 (54 HSPs)
chr5 (9-319)||(20623082-20623392)
chr5 (9-319)||(21233368-21233678)
chr5 (9-319)||(16536310-16536620)
chr5 (9-319)||(37052857-37053167)
chr5 (16-315)||(25900253-25900552)
chr5 (41-301)||(34939408-34939669)
chr5 (169-316)||(23507081-23507228)
chr5 (170-300)||(18531068-18531198)
chr5 (38-316)||(27182426-27182694)
chr5 (170-316)||(22053834-22053980)
chr5 (17-266)||(32950861-32951111)
chr5 (181-316)||(29188284-29188419)
chr5 (9-139)||(1219363-1219493)
chr5 (185-316)||(27009958-27010089)
chr5 (9-114)||(23328865-23328970)
chr5 (9-114)||(24616469-24616574)
chr5 (9-114)||(24712845-24712950)
chr5 (9-114)||(24745863-24745968)
chr5 (181-316)||(22366481-22366616)
chr5 (184-316)||(18777995-18778127)
chr5 (184-316)||(43443398-43443530)
chr5 (181-316)||(4199985-4200120)
chr5 (181-316)||(19500016-19500151)
chr5 (181-316)||(25426745-25426880)
chr5 (38-115)||(23981360-23981437)
chr5 (181-316)||(12491-12626)
chr5 (181-316)||(21073595-21073730)
chr5 (38-115)||(21651018-21651095)
chr5 (38-113)||(2032135-2032210)
chr5 (38-151)||(108683-108797)
chr5 (15-266)||(23514728-23514968)
chr5 (37-115)||(23507270-23507348)
chr5 (37-139)||(35790969-35791071)
chr5 (38-115)||(21205249-21205325)
chr5 (42-115)||(25005137-25005210)
chr5 (40-139)||(7425607-7425706)
chr5 (44-115)||(7529228-7529299)
chr5 (72-115)||(16105967-16106010)
chr5 (41-196)||(17909742-17909897)
chr5 (38-113)||(18530943-18531018)
chr5 (42-115)||(11343008-11343081)
chr5 (38-115)||(22053708-22053785)
chr5 (84-139)||(36989688-36989743)
chr5 (185-265)||(21310709-21310790)
chr5 (40-117)||(27010144-27010221)
chr5 (185-265)||(29918131-29918212)
chr5 (41-151)||(9730236-9730347)
chr5 (175-266)||(10777968-10778059)
chr5 (84-139)||(11211983-11212038)
chr5 (84-139)||(21932299-21932354)
chr5 (84-139)||(21938469-21938524)
chr5 (84-139)||(35582319-35582374)
chr5 (185-265)||(19862375-19862456)
chr5 (185-226)||(23981516-23981557)
[»] chr4 (50 HSPs)
chr4 (9-319)||(16327766-16328076)
chr4 (9-319)||(10488675-10488985)
chr4 (9-319)||(26680313-26680623)
chr4 (14-301)||(13048066-13048353)
chr4 (9-144)||(16608939-16609074)
chr4 (38-316)||(13246546-13246814)
chr4 (169-316)||(122005-122152)
chr4 (170-316)||(15675090-15675236)
chr4 (170-316)||(10104251-10104397)
chr4 (168-316)||(54118243-54118391)
chr4 (9-139)||(20001006-20001136)
chr4 (196-316)||(31115745-31115865)
chr4 (185-316)||(10644336-10644467)
chr4 (9-114)||(26339327-26339432)
chr4 (170-242)||(33240890-33240962)
chr4 (181-316)||(47357771-47357906)
chr4 (38-115)||(15135862-15135939)
chr4 (38-115)||(15272166-15272243)
chr4 (29-114)||(55376440-55376525)
chr4 (38-115)||(122194-122271)
chr4 (185-265)||(40885570-40885650)
chr4 (40-115)||(14952085-14952160)
chr4 (41-116)||(32460561-32460636)
chr4 (38-137)||(15674964-15675065)
chr4 (82-196)||(9795453-9795566)
chr4 (40-139)||(15287119-15287218)
chr4 (40-139)||(15294228-15294327)
chr4 (72-139)||(17145563-17145630)
chr4 (41-139)||(7131940-7132038)
chr4 (42-116)||(40885418-40885492)
chr4 (38-115)||(10104125-10104202)
chr4 (41-151)||(8045235-8045346)
chr4 (41-196)||(14996364-14996519)
chr4 (41-196)||(19697236-19697391)
chr4 (41-196)||(19707821-19707976)
chr4 (45-115)||(14500074-14500144)
chr4 (40-114)||(22351938-22352012)
chr4 (41-139)||(22738552-22738650)
chr4 (38-112)||(31132628-31132702)
chr4 (38-137)||(33240987-33241088)
chr4 (168-301)||(7850131-7850264)
chr4 (80-121)||(7850308-7850349)
chr4 (37-117)||(47357956-47358035)
chr4 (175-266)||(18169137-18169228)
chr4 (170-201)||(31132545-31132576)
chr4 (82-151)||(16523109-16523179)
chr4 (72-113)||(18248527-18248568)
chr4 (186-226)||(13809511-13809551)
chr4 (186-265)||(15044994-15045074)
chr4 (83-115)||(54118168-54118200)
[»] chr3 (62 HSPs)
chr3 (9-319)||(2449079-2449388)
chr3 (9-316)||(45860922-45861228)
chr3 (9-301)||(13954730-13955021)
chr3 (38-318)||(17912353-17912631)
chr3 (101-316)||(13975654-13975868)
chr3 (169-319)||(16744115-16744265)
chr3 (15-316)||(15614950-15615237)
chr3 (169-316)||(51158018-51158165)
chr3 (37-316)||(14842441-14842708)
chr3 (18-266)||(11986014-11986263)
chr3 (168-316)||(15859023-15859171)
chr3 (169-316)||(12030147-12030294)
chr3 (38-316)||(13839010-13839277)
chr3 (175-316)||(15936633-15936774)
chr3 (169-316)||(2049926-2050073)
chr3 (175-316)||(15938475-15938616)
chr3 (9-196)||(8268575-8268763)
chr3 (9-196)||(8275675-8275863)
chr3 (38-265)||(54651625-54651841)
chr3 (40-115)||(38168237-38168312)
chr3 (181-316)||(55316336-55316471)
chr3 (203-316)||(16821256-16821369)
chr3 (40-115)||(33342204-33342279)
chr3 (181-316)||(41270192-41270327)
chr3 (41-115)||(2050115-2050189)
chr3 (17-115)||(23492696-23492794)
chr3 (38-115)||(53771365-53771442)
chr3 (168-231)||(19231982-19232045)
chr3 (38-115)||(12030028-12030105)
chr3 (38-115)||(16261777-16261854)
chr3 (45-115)||(19260711-19260781)
chr3 (38-115)||(30153265-30153342)
chr3 (41-115)||(14285289-14285363)
chr3 (41-115)||(54685159-54685233)
chr3 (42-115)||(28558494-28558567)
chr3 (185-239)||(14080701-14080756)
chr3 (37-139)||(5228595-5228697)
chr3 (41-139)||(18911276-18911374)
chr3 (41-115)||(19947026-19947100)
chr3 (42-115)||(51960990-51961063)
chr3 (41-196)||(11477053-11477209)
chr3 (37-117)||(18896915-18896995)
chr3 (42-266)||(12264668-12264881)
chr3 (169-215)||(19260823-19260869)
chr3 (82-115)||(16933868-16933901)
chr3 (84-266)||(49232603-49232774)
chr3 (83-115)||(17955884-17955916)
chr3 (37-266)||(25058906-25059124)
chr3 (84-139)||(1467657-1467712)
chr3 (82-266)||(12902006-12902179)
chr3 (175-266)||(15468338-15468429)
chr3 (84-138)||(12812125-12812179)
chr3 (72-117)||(15468246-15468291)
chr3 (83-115)||(2844514-2844546)
chr3 (83-115)||(3992873-3992905)
chr3 (185-265)||(4145814-4145894)
chr3 (38-86)||(5240584-5240632)
chr3 (83-115)||(15857163-15857195)
chr3 (83-115)||(19232089-19232121)
chr3 (186-265)||(47784767-47784847)
chr3 (83-115)||(54038024-54038056)
chr3 (83-115)||(55513193-55513225)
[»] scaffold0124 (1 HSPs)
scaffold0124 (9-319)||(1423-1732)
[»] scaffold0078 (1 HSPs)
scaffold0078 (9-319)||(36906-37216)
[»] chr1 (28 HSPs)
chr1 (9-319)||(51452605-51452914)
chr1 (9-316)||(45051539-45051832)
chr1 (9-316)||(2116371-2116664)
chr1 (38-316)||(20931461-20931727)
chr1 (38-316)||(20913146-20913412)
chr1 (169-316)||(41394338-41394485)
chr1 (38-265)||(37844329-37844546)
chr1 (38-265)||(20445846-20446064)
chr1 (38-316)||(20893506-20893773)
chr1 (168-265)||(20531611-20531708)
chr1 (9-114)||(7640777-7640882)
chr1 (15-300)||(22227941-22228215)
chr1 (9-119)||(46523691-46523801)
chr1 (9-114)||(22035755-22035860)
chr1 (175-300)||(22232638-22232763)
chr1 (181-316)||(5072388-5072523)
chr1 (181-316)||(18601118-18601253)
chr1 (38-115)||(20531751-20531828)
chr1 (83-115)||(41394527-41394559)
chr1 (84-115)||(15861327-15861358)
chr1 (84-139)||(17004921-17004976)
chr1 (84-139)||(19962417-19962472)
chr1 (40-117)||(5072260-5072337)
chr1 (42-139)||(18059634-18059731)
chr1 (185-226)||(22143361-22143402)
chr1 (84-129)||(38055009-38055054)
chr1 (83-115)||(21860334-21860366)
chr1 (83-115)||(44034871-44034903)
[»] scaffold0772 (1 HSPs)
scaffold0772 (9-316)||(5645-5951)
[»] scaffold0132 (1 HSPs)
scaffold0132 (49-301)||(13637-13890)
[»] chr6 (45 HSPs)
chr6 (37-301)||(1657615-1657880)
chr6 (9-316)||(1649947-1650240)
chr6 (37-301)||(15862602-15862867)
chr6 (45-316)||(35009314-35009586)
chr6 (38-252)||(27751605-27751819)
chr6 (38-316)||(23153563-23153831)
chr6 (169-300)||(14626118-14626249)
chr6 (17-266)||(29666040-29666280)
chr6 (9-139)||(23978052-23978182)
chr6 (181-316)||(25175680-25175815)
chr6 (181-316)||(27653983-27654118)
chr6 (38-115)||(23995247-23995324)
chr6 (38-115)||(23148303-23148380)
chr6 (41-196)||(16299844-16299999)
chr6 (181-316)||(16825752-16825889)
chr6 (41-113)||(15742078-15742150)
chr6 (41-115)||(32276617-32276691)
chr6 (40-266)||(16232059-16232274)
chr6 (37-266)||(1556172-1556390)
chr6 (37-117)||(19610323-19610403)
chr6 (41-115)||(18002353-18002427)
chr6 (41-151)||(18823241-18823352)
chr6 (41-151)||(18839096-18839207)
chr6 (41-115)||(26090059-26090133)
chr6 (185-265)||(18629608-18629689)
chr6 (185-265)||(29605616-29605696)
chr6 (84-115)||(4991396-4991427)
chr6 (84-139)||(10488982-10489037)
chr6 (84-139)||(16376291-16376346)
chr6 (84-139)||(16383615-16383670)
chr6 (84-139)||(16556057-16556112)
chr6 (84-139)||(16632613-16632668)
chr6 (185-239)||(16887792-16887847)
chr6 (187-258)||(17083200-17083271)
chr6 (40-139)||(18086697-18086796)
chr6 (84-139)||(19299520-19299575)
chr6 (185-239)||(35136013-35136068)
chr6 (41-139)||(13620669-13620767)
chr6 (146-196)||(19629567-19629617)
chr6 (40-114)||(29869650-29869724)
chr6 (42-139)||(22225614-22225711)
chr6 (42-139)||(22251442-22251539)
chr6 (185-226)||(33324898-33324939)
chr6 (83-115)||(19983192-19983224)
chr6 (83-115)||(35015057-35015089)
[»] scaffold0162 (3 HSPs)
scaffold0162 (42-316)||(8051-8327)
scaffold0162 (38-316)||(26295-26562)
scaffold0162 (19-189)||(11989-12160)
[»] scaffold0125 (1 HSPs)
scaffold0125 (41-300)||(41780-42039)
[»] scaffold0266 (3 HSPs)
scaffold0266 (38-301)||(3463-3714)
scaffold0266 (169-316)||(1240-1387)
scaffold0266 (38-115)||(1430-1507)
[»] scaffold0075 (1 HSPs)
scaffold0075 (82-265)||(34372-34556)
[»] scaffold0049 (1 HSPs)
scaffold0049 (41-316)||(48303-48578)
[»] scaffold0195 (2 HSPs)
scaffold0195 (168-316)||(19322-19470)
scaffold0195 (169-316)||(21406-21553)
[»] scaffold0302 (2 HSPs)
scaffold0302 (169-316)||(12229-12376)
scaffold0302 (38-115)||(12418-12495)
[»] scaffold0413 (1 HSPs)
scaffold0413 (37-316)||(5944-6211)
[»] scaffold0175 (2 HSPs)
scaffold0175 (169-301)||(956-1088)
scaffold0175 (72-120)||(871-919)
[»] scaffold0077 (2 HSPs)
scaffold0077 (168-316)||(36912-37060)
scaffold0077 (38-115)||(36789-36869)
[»] scaffold0023 (5 HSPs)
scaffold0023 (169-301)||(48729-48861)
scaffold0023 (203-316)||(36210-36323)
scaffold0023 (37-139)||(153878-153980)
scaffold0023 (82-115)||(48903-48936)
scaffold0023 (82-151)||(61121-61191)
[»] scaffold0025 (4 HSPs)
scaffold0025 (170-316)||(8965-9111)
scaffold0025 (172-316)||(148837-148981)
scaffold0025 (38-115)||(146906-146983)
scaffold0025 (38-137)||(9136-9237)
[»] scaffold0018 (2 HSPs)
scaffold0018 (169-315)||(51182-51328)
scaffold0018 (38-115)||(51063-51140)
[»] scaffold0012 (2 HSPs)
scaffold0012 (38-301)||(247321-247574)
scaffold0012 (37-159)||(34029-34150)
[»] scaffold0011 (2 HSPs)
scaffold0011 (168-316)||(123163-123311)
scaffold0011 (38-115)||(123042-123119)
[»] scaffold0008 (2 HSPs)
scaffold0008 (41-265)||(128053-128265)
scaffold0008 (203-316)||(31697-31810)
[»] scaffold1542 (1 HSPs)
scaffold1542 (168-265)||(533-630)
[»] scaffold0001 (2 HSPs)
scaffold0001 (38-316)||(172021-172287)
scaffold0001 (38-316)||(177724-177990)
[»] scaffold0498 (1 HSPs)
scaffold0498 (38-316)||(8994-9260)
[»] scaffold0218 (1 HSPs)
scaffold0218 (168-316)||(5060-5208)
[»] scaffold0106 (2 HSPs)
scaffold0106 (169-316)||(41845-41992)
scaffold0106 (38-115)||(42034-42111)
[»] scaffold0028 (6 HSPs)
scaffold0028 (168-315)||(89453-89600)
scaffold0028 (38-115)||(89333-89410)
scaffold0028 (38-115)||(107663-107740)
scaffold0028 (168-220)||(107783-107835)
scaffold0028 (42-115)||(130880-130953)
scaffold0028 (185-239)||(79731-79786)
[»] scaffold0361 (1 HSPs)
scaffold0361 (41-262)||(3360-3578)
[»] scaffold0026 (4 HSPs)
scaffold0026 (175-316)||(107863-108004)
scaffold0026 (185-316)||(64527-64663)
scaffold0026 (184-226)||(89863-89905)
scaffold0026 (40-117)||(64395-64472)
[»] scaffold0084 (1 HSPs)
scaffold0084 (40-266)||(55970-56196)
[»] scaffold0420 (1 HSPs)
scaffold0420 (181-316)||(13325-13460)
[»] scaffold0116 (2 HSPs)
scaffold0116 (185-316)||(152-283)
scaffold0116 (37-117)||(336-416)
[»] scaffold0529 (1 HSPs)
scaffold0529 (17-316)||(3079-3366)
[»] scaffold0215 (4 HSPs)
scaffold0215 (203-316)||(9371-9484)
scaffold0215 (203-316)||(16269-16382)
scaffold0215 (41-117)||(9223-9299)
scaffold0215 (41-117)||(16121-16197)
[»] scaffold0009 (1 HSPs)
scaffold0009 (38-316)||(272141-272407)
[»] scaffold0076 (2 HSPs)
scaffold0076 (204-316)||(43114-43226)
scaffold0076 (84-139)||(39386-39441)
[»] scaffold1711 (1 HSPs)
scaffold1711 (181-316)||(1304-1439)
[»] scaffold0597 (1 HSPs)
scaffold0597 (40-115)||(835-910)
[»] scaffold0465 (1 HSPs)
scaffold0465 (40-115)||(9839-9914)
[»] scaffold0139 (2 HSPs)
scaffold0139 (203-316)||(14083-14196)
scaffold0139 (175-316)||(21110-21251)
[»] scaffold0022 (2 HSPs)
scaffold0022 (219-300)||(5254-5335)
scaffold0022 (186-226)||(102923-102963)
[»] scaffold0467 (1 HSPs)
scaffold0467 (37-266)||(10210-10428)
[»] scaffold0066 (3 HSPs)
scaffold0066 (38-266)||(45197-45415)
scaffold0066 (38-138)||(54701-54801)
scaffold0066 (219-266)||(54583-54630)
[»] scaffold0032 (5 HSPs)
scaffold0032 (37-115)||(108029-108107)
scaffold0032 (38-115)||(55904-55981)
scaffold0032 (82-196)||(13266-13379)
scaffold0032 (185-226)||(93773-93814)
scaffold0032 (185-252)||(104623-104691)
[»] scaffold0251 (1 HSPs)
scaffold0251 (38-115)||(13240-13317)
[»] scaffold0004 (1 HSPs)
scaffold0004 (38-115)||(193352-193429)
[»] scaffold0158 (1 HSPs)
scaffold0158 (38-114)||(25532-25608)
[»] scaffold0234 (1 HSPs)
scaffold0234 (40-115)||(17261-17336)
[»] scaffold0761 (1 HSPs)
scaffold0761 (37-139)||(1446-1548)
[»] scaffold0160 (1 HSPs)
scaffold0160 (40-114)||(339-413)
[»] scaffold0706 (1 HSPs)
scaffold0706 (38-115)||(6398-6475)
[»] scaffold0058 (2 HSPs)
scaffold0058 (38-115)||(57347-57424)
scaffold0058 (185-238)||(70307-70361)
[»] scaffold0369 (1 HSPs)
scaffold0369 (37-300)||(3854-4107)
[»] scaffold0118 (1 HSPs)
scaffold0118 (41-115)||(34266-34340)
[»] scaffold0039 (1 HSPs)
scaffold0039 (38-115)||(12373-12450)
[»] scaffold0037 (1 HSPs)
scaffold0037 (41-116)||(95297-95372)
[»] scaffold0207 (1 HSPs)
scaffold0207 (41-115)||(18026-18100)
[»] scaffold0029 (1 HSPs)
scaffold0029 (41-187)||(49710-49856)
[»] scaffold0173 (1 HSPs)
scaffold0173 (41-116)||(5548-5623)
[»] scaffold0335 (1 HSPs)
scaffold0335 (41-115)||(5434-5508)
[»] scaffold0123 (1 HSPs)
scaffold0123 (185-265)||(8176-8257)
[»] scaffold1500 (1 HSPs)
scaffold1500 (72-139)||(1420-1487)
[»] scaffold0383 (1 HSPs)
scaffold0383 (42-117)||(2698-2773)
[»] scaffold0303 (1 HSPs)
scaffold0303 (41-115)||(4304-4378)
[»] scaffold0183 (1 HSPs)
scaffold0183 (40-114)||(6905-6979)
[»] scaffold0456 (2 HSPs)
scaffold0456 (185-226)||(1546-1587)
scaffold0456 (185-226)||(8691-8732)
[»] scaffold0034 (1 HSPs)
scaffold0034 (83-115)||(80187-80219)
[»] scaffold0409 (2 HSPs)
scaffold0409 (185-263)||(1348-1427)
scaffold0409 (185-263)||(9603-9682)
[»] scaffold0367 (1 HSPs)
scaffold0367 (81-151)||(17207-17278)
[»] scaffold0213 (1 HSPs)
scaffold0213 (84-139)||(29445-29500)
[»] scaffold0191 (1 HSPs)
scaffold0191 (72-119)||(7362-7409)
[»] scaffold0107 (1 HSPs)
scaffold0107 (84-139)||(31592-31647)
[»] scaffold0389 (1 HSPs)
scaffold0389 (186-239)||(10854-10908)
[»] scaffold0151 (1 HSPs)
scaffold0151 (185-238)||(22422-22476)
[»] scaffold0700 (1 HSPs)
scaffold0700 (185-265)||(2691-2772)
[»] scaffold0516 (1 HSPs)
scaffold0516 (41-114)||(12002-12075)
[»] scaffold0138 (1 HSPs)
scaffold0138 (185-265)||(22429-22510)
[»] scaffold0243 (1 HSPs)
scaffold0243 (186-265)||(2317-2397)
[»] scaffold0013 (1 HSPs)
scaffold0013 (40-100)||(154305-154365)


Alignment Details
Target: chr2 (Bit Score: 303; Significance: 1e-170; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 9 - 319
Target Start/End: Original strand, 14906280 - 14906590
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14906280 gagaagaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 14906379  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14906380 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 14906479  T
Q  209 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14906480 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 14906579  T
Q  309 gtgaatttgac 319  Q
     ||||||||||    
T  14906580 atgaatttgac 14906590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 9 - 319
Target Start/End: Complemental strand, 23820494 - 23820184
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23820494 gagaagaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 23820395  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23820394 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 23820295  T
Q  209 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  23820294 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 23820195  T
Q  309 gtgaatttgac 319  Q
     ||||||||||    
T  23820194 atgaatttgac 23820184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 9 - 319
Target Start/End: Original strand, 19689241 - 19689551
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19689241 gagaagaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatttaaggtaagggggttagtctttatca 19689340  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19689341 taatcatgttcattctttgcaatttttcatgatttgtatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 19689440  T
Q  209 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19689441 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 19689540  T
Q  309 gtgaatttgac 319  Q
     ||||||||||    
T  19689541 atgaatttgac 19689551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 9 - 319
Target Start/End: Complemental strand, 20015434 - 20015124
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20015434 gagaagaacttgaagaatccaattgggaaaacttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 20015335  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    | ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20015334 tgatcatgttcattctttgcaatttttcatgatttagatgaaattggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 20015235  T
Q  209 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 308  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20015234 tatgtttgcatgcatgaattgataataattgtgtgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 20015135  T
Q  309 gtgaatttgac 319  Q
     ||||||||||    
T  20015134 atgaatttgac 20015124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 9 - 316
Target Start/End: Original strand, 17396493 - 17396799
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| ||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  17396493 gagaagaacttgaagaatccaattgggtgagcttaggagctaaattaaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttacca 17396592  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17396593 taatcatgttcattctttgcaatttttcatgatttgtatgaaatgggttgacatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 17396692  T
Q  209 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 308  Q
    |||| |||||||||||||||| | || ||||||||||||||||| ||||||||||||| |||| || ||||||| |||||||||| |||||||  ||| |    
T  17396693 tatg-ttgtatgcatgaattgttgatgattgtatgattgttggtgaaattacatgtttaaataagtaaaaatgataagttatgaatattgtgctcaattg 17396791  T
Q  309 gtgaattt 316  Q
    ||||||||    
T  17396792 gtgaattt 17396799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 17 - 316
Target Start/End: Original strand, 25265236 - 25265537
Alignment:
Q  17 cttgaagaatccaattggga-aagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||| |||||||  |||||||||||||||| ||||||||||||||||  ||||| | |||||| ||||||||||||||||| |||||||||||    
T  25265236 cttgaagaatcaaattggggtaagcttaggagctaaagtgaagcctaggtttggattaatcattatctaatgtaagggggttagtcttcatcataatcat 25265335  T
Q  116 gttcattctttgcaatttttcatgatttggatgaa-atgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtt 214  Q
    |||||||  ||||||||| ||||   ||| ||||| |||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||| ||||||    
T  25265336 gttcatttattgcaatttctcatttgttgtatgaatatgggttgaattgaataaatggataattgttgctaaattcgtgctctaactttgatgttatgtt 25265435  T
Q  215 tgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaat 314  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||  | ||||| ||||||  ||||| ||||||||||||  ||| |||||||    
T  25265436 tgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaattatgtaaaaatgtgaagttgtgaaaattgtgctcaattggtgaat 25265535  T
Q  315 tt 316  Q
    ||    
T  25265536 tt 25265537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 38 - 300
Target Start/End: Complemental strand, 463120 - 462870
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 137  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||  |||||  ||| || ||||||    
T  463120 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcatcatt--ttgtaaattttca 463023  T
Q  138 tgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataat 237  Q
        ||| ||||| |  | | |          |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||    
T  463022 aatgttgtatgaattttgctta----------tggataattgttgctaaattcgtgctccaactgtgatgatatatttgtatgcatgaattgatgataat 462933  T
Q  238 tgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtg 300  Q
    |||| |||||||||| ||||||||||||  ||||||| ||||||| ||||| |||||||||||    
T  462932 tgtaagattgttggtgaaattacatgttcaaatatgtaaaaatgataagttgtgaaaattgtg 462870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 82 - 317
Target Start/End: Original strand, 7507756 - 7507992
Alignment:
Q  82 ctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaa-atgggttgaaatgaatgaatggataattgt 180  Q
    |||||||||||||||||||||| ||||||||||||||||||  ||||||||| ||||   ||| ||||| |||||||||| |||||||||| |||||| |    
T  7507756 ctaaggtaagggggttagtcttcatcataatcatgttcatttattgcaatttctcatttgttgtatgaatatgggttgaattgaatgaatgaataattat 7507855  T
Q  181 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 280  Q
    ||||||||||||||||    | ||||| ||| ||  | ||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||| |||||    
T  7507856 tgctaaattcgtgctcttgttgtgatgctattttcttgtgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaat 7507955  T
Q  281 gaaaagttatgaaaattgtgcaaaatgggtgaatttg 317  Q
     | |||||||||||||||||   ||| ||||||||||    
T  7507956 aataagttatgaaaattgtgttcaattggtgaatttg 7507992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 38 - 316
Target Start/End: Original strand, 36982319 - 36982588
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 137  Q
    |||| |||||||||||||||||||| ||| |   || |||| ||||||||||||||||||||||||||||||||||||  ||||| |||| || ||||||    
T  36982319 agctgaggagctaaattgaagcctaagttggtattagtctttatctaaggtaagggggttagtctttatcataatcatcatcatt-tttgtaaattttca 36982417  T
Q  138 tgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataat 237  Q
        ||| ||||| |   ||    || || |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||    
T  36982418 aatgttgtatgaatt---tt----tgcat-aatggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtattcatgaattgatgataat 36982509  T
Q  238 tgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||| ||||| |||| ||||||||||||  ||||||| ||||||| ||||| ||||||||||||  ||| |||||||||    
T  36982510 tgtaagattgctggtgaaattacatgttcaaatatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattt 36982588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 38 - 316
Target Start/End: Complemental strand, 8891626 - 8891358
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 137  Q
    ||||||||| ||||||||||||||| ||| ||  ||||||| ||||||||||| ||||||||||||||||||||||||  |||||  ||| || ||||||    
T  8891626 agcttaggaactaaattgaagcctaagttgggattaatctttatctaaggtaaaggggttagtctttatcataatcatcatcatt--ttgtaaattttca 8891529  T
Q  138 tgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataat 237  Q
        ||| ||||| |   ||    || || |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||    
T  8891528 aatgttgtatgaatt---tt----tgcat-aatggataattgttgctaaattcgtgctccaactgtgataatatgtttgtatgcatgaattgatgataat 8891437  T
Q  238 tgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    ||||||||||||||  ||||||||||||  |||| |   |||||| ||||| ||||||||||||  ||| |||||||||    
T  8891436 tgtatgattgttggcgaaattacatgttcaaataggaacaaatgataagttgtgaaaattgtgctcaattggtgaattt 8891358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 168 - 316
Target Start/End: Original strand, 19794703 - 19794851
Alignment:
Q  168 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttg 267  Q
    ||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||      
T  19794703 aatggataattgtcgttaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgataataattgtatgattgttggtgaaattacatgttca 19794802  T
Q  268 aatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||| |   |||||| ||||| ||||||||||||  ||| |||||||||    
T  19794803 aataggaacaaatgataagttgtgaaaattgtgctcaattggtgaattt 19794851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 169 - 316
Target Start/End: Original strand, 20627313 - 20627460
Alignment:
Q  169 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 268  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||   |    
T  20627313 atggataattgttgttaaattcgtgctccaactgtgatgatatgtttgtatgcacgaattgatgataattgtatgattgttggtgaaattacatgtccaa 20627412  T
Q  269 atatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||||| ||||||| || || ||||||||||||  ||| |||||||||    
T  20627413 atatgtaaaaatgataacttgtgaaaattgtgctcaattggtgaattt 20627460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 170 - 316
Target Start/End: Original strand, 24341390 - 24341536
Alignment:
Q  170 tggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaa 269  Q
    ||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||  |     
T  24341390 tggataattgttgctaaattcatgcttcaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattatatgttcaat 24341489  T
Q  270 tatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    ||||| ||||||  ||||| ||||||||||||  ||| |||||||||    
T  24341490 tatgtaaaaatgtgaagttgtgaaaattgtgctcaattggtgaattt 24341536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 170 - 316
Target Start/End: Original strand, 43642958 - 43643104
Alignment:
Q  170 tggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaa 269  Q
    |||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||    
T  43642958 tggataattgttgctaaatttgtgctccaattgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaa 43643057  T
Q  270 tatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    || |   |||||  ||||| ||||||||||||  ||| |||||||||    
T  43643058 taggaacaaatgttaagttgtgaaaattgtgctcaattggtgaattt 43643104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 12641485 - 12641615
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||    ||||||  |||||||||||||||||||||||||||||  ||||||    
T  12641485 gagaagaacttgaagaatccaattgggtaagcttaggagctaaattgaagcaagagtttgggttaatcttcatctaaggtaagggggttagttattatca 12641584  T
Q  109 taatcatgttcattctttgcaatttttcatg 139  Q
    ||||||||| || | |||||| ||| |||||    
T  12641585 taatcatgtacaatttttgcattttctcatg 12641615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 9 - 266
Target Start/End: Complemental strand, 12728805 - 12728559
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||    ||||||  |||||||| ||||||||||||||||||||  ||||||    
T  12728805 gagaagaacttgaagaatccaattgggtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatca 12728706  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatg-aaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatg 207  Q
    ||||||||| || | |||||| ||| |||||  ||| ||| ||||||||||          ||| | ||||||||||||||||||||||   || |||||    
T  12728705 taatcatgtacaatttttgcattttctcatg--ttgtatgaaaatgggttg----------atgaacaattgttgctaaattcgtgctcttgctgtgatg 12728618  T
Q  208 atatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 266  Q
     ||| ||  | ||||||||||||| || || ||||| |||| ||| |||||||||||||    
T  12728617 ctattttcttgtgcatgaattgatgattatggtatgtttgtgggtgaaattacatgttt 12728559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 9 - 266
Target Start/End: Complemental strand, 34824888 - 34824642
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||    ||||||  |||||||| ||||||||||||||||||||  ||||||    
T  34824888 gagaagaacttgaagaatccaattgggtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagtgattatca 34824789  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatg-aaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatg 207  Q
    ||||||||| || | |||||| ||| |||||  ||| ||| ||||||||||          ||| | ||||||||||||||||||||||   || |||||    
T  34824788 taatcatgtacaatttttgcattttctcatg--ttgtatgaaaatgggttg----------atgaacaattgttgctaaattcgtgctcttgctgtgatg 34824701  T
Q  208 atatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 266  Q
     ||| ||  | ||||||||||||| || || ||||| |||| ||| |||||||||||||    
T  34824700 ctattttcttgtgcatgaattgatgattatggtatgtttgtgggtgaaattacatgttt 34824642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 8944254 - 8944129
Alignment:
Q  14 gaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatc 113  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    ||||||  |||||||| ||||||||||||||||||||  |||||||||||    
T  8944254 gaacttgaagaatccaattgggtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatc 8944155  T
Q  114 atgttcattctttgcaatttttcatg 139  Q
    |||| || | |||||| ||| |||||    
T  8944154 atgtacaatttttgcattttctcatg 8944129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 117
Target Start/End: Original strand, 12635711 - 12635819
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||    ||||||  |||||||| ||||||||||||||||||||  ||||||    
T  12635711 gagaagaacttgaagaatccaattgggtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatca 12635810  T
Q  109 taatcatgt 117  Q
    |||||||||    
T  12635811 taatcatgt 12635819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 23774549 - 23774438
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||    ||||||  |||||||| ||||||||||||||||||||  ||||||    
T  23774549 gagaagaacttgaagaatccaattgggtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatca 23774450  T
Q  109 taatcatgttca 120  Q
    |||||| |||||    
T  23774449 taatcaagttca 23774438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 9 - 117
Target Start/End: Original strand, 3798446 - 3798554
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||| ||||||| |||||||||||||||    ||||||  |||||||| ||||||||||||||||||||  ||||||    
T  3798446 gagaagaacttgaagaatccaattgggtaagcttatgagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatca 3798545  T
Q  109 taatcatgt 117  Q
    |||||||||    
T  3798546 taatcatgt 3798554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 40 - 115
Target Start/End: Original strand, 9652753 - 9652828
Alignment:
Q  40 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||||||||| |||| ||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  9652753 cttaggagctaaattgaaacctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 9652828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 22863312 - 22863235
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||||||||| |||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  22863312 agcttaggagctaaattgcagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 22863235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 19886661 - 19886796
Alignment:
Q  181 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 280  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||||  || |||||| ||||||||| ||||||||||||   |||||  ||| |    
T  19886661 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaagt 19886760  T
Q  281 gaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    || |||||||||| ||||||| |||  |||||||||    
T  19886761 gataagttatgaagattgtgctaaagtggtgaattt 19886796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 33128446 - 33128335
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat-gttcattctttgcaatttttcatg 139  Q
    |||||||||||| ||||||||| ||||||  ||||| | | |||||||||||||||||||||| |||||||||||  ||  || ||||||||||||| ||    
T  33128446 ttaggagctaaagtgaagcctaagtttggattaatcataacctaaggtaagggggttagtcttcatcataatcataattgtttgtttgcaatttttcttg 33128347  T
Q  140 atttggatgaaa 151  Q
     |||| ||||||    
T  33128346 gtttgtatgaaa 33128335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 137
Target Start/End: Original strand, 24341264 - 24341365
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcat--tctttgcaattttt 135  Q
    ||||||||||||||| ||||||||| |||  |  ||||| | |||||||||||||||||||||||| |||||||||||  ||||  | ||||||||||||    
T  24341264 agcttaggagctaaaatgaagcctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataatcatcatcatcatttttgcaattttt 24341363  T
Q  136 ca 137  Q
    ||    
T  24341364 ca 24341365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 21273904 - 21273980
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||||| |||||||| ||||||||| ||| ||  ||||||| ||||||||||| ||||||||||||||||||||||||    
T  21273904 agcttatgagctaaagtgaagcctaagttgggattaatctttatctaaggtaa-ggggttagtctttatcataatcat 21273980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 32466261 - 32466177
Alignment:
Q  29 aattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatca 114  Q
    |||||||  ||||||||||||||||||||||||| ||||||  | ||| | ||||||||||| |||||||||||| ||||||||||    
T  32466261 aattgggtgagcttaggagctaaattgaagcctaagtttgggttgatccttatctaaggtaa-ggggttagtcttcatcataatca 32466177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 37 - 139
Target Start/End: Complemental strand, 16935978 - 16935876
Alignment:
Q  37 aagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttc 136  Q
    ||||||||||||| ||||||||     ||||||  |||||||| ||||||||||||||||||||  ||||||||||||||| || | |||||| ||| ||    
T  16935978 aagcttaggagctgaattgaagaaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctc 16935879  T
Q  137 atg 139  Q
    |||    
T  16935878 atg 16935876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 37 - 139
Target Start/End: Complemental strand, 17006638 - 17006536
Alignment:
Q  37 aagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttc 136  Q
    ||||||||||||| ||||||||     ||||||  |||||||| ||||||||||||||||||||  ||||||||||||||| || | |||||| ||| ||    
T  17006638 aagcttaggagctgaattgaagaaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctc 17006539  T
Q  137 atg 139  Q
    |||    
T  17006538 atg 17006536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 116
Target Start/End: Original strand, 28031092 - 28031167
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatg 116  Q
    ||||||| |||| ||||||||| |||||   ||||| | | |||||||||||||||||||||| ||||||||||||    
T  28031092 ttaggagttaaagtgaagcctaagtttgaattaatcattacctaaggtaagggggttagtcttcatcataatcatg 28031167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 42177875 - 42177942
Alignment:
Q  72 taatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||| ||||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  42177875 taatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 42177942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 115
Target Start/End: Complemental strand, 22284310 - 22284278
Alignment:
Q  83 taaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||||||||||||||||||||||||    
T  22284310 taaggtaagggggttagtctttatcataatcat 22284278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 11231256 - 11231311
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  11231256 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 11231311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 17204733 - 17204622
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat-gttcattctttgcaatttttcatg 139  Q
    ||||||| |||| ||||| ||| ||||||  ||||| | | |||| ||||||||||||||||| |||||||||||  ||  || ||||||||||||| ||    
T  17204733 ttaggagttaaagtgaagtctaagtttggattaatcataacctaaagtaagggggttagtcttcatcataatcataattgtttgtttgcaatttttcttg 17204634  T
Q  140 atttggatgaaa 151  Q
     |||| ||||||    
T  17204633 gtttgtatgaaa 17204622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 22513103 - 22513158
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  22513103 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 22513158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 24685699 - 24685754
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  24685699 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 24685754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 115
Target Start/End: Complemental strand, 25213403 - 25213372
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||||||||||||||||||||    
T  25213403 aaggtaagggggttagtctttatcataatcat 25213372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 28775725 - 28775780
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  28775725 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 28775780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 114
Target Start/End: Complemental strand, 21142276 - 21142203
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatca 114  Q
    |||||||||||| ||||||||| |||  |  ||| | |||||||||||||||||||| || || ||||||||||    
T  21142276 ttaggagctaaagtgaagcctaagttaagattaaacatcatctaaggtaagggggtttgttttcatcataatca 21142203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 265
Target Start/End: Complemental strand, 24884933 - 24884852
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcat-gaattgataataattgtatgattgttggttaaattacatgtt 265  Q
    ||||| |||||| |||| |||||||||||||| |||||| |||||| | ||||||| ||  |||||||| ||||| ||||||    
T  24884933 aaatttgtgctctaactatgatgatatgtttgaatgcatggaattggtgataattgaattgttgttggtgaaattgcatgtt 24884852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 265
Target Start/End: Complemental strand, 68238 - 68158
Alignment:
Q  186 aattcgtgctccaactttgatgatatgtttgtatgcatgaa-ttgataataattgtatgattgttggttaaattacatgtt 265  Q
    |||||||||||||| | ||||| |||||||| ||||||||| ||| | ||||||| ||  |||||||| ||||| ||||||    
T  68238 aattcgtgctccaattatgatgttatgtttgaatgcatgaagttgttgataattgaattgttgttggtgaaatttcatgtt 68158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 115
Target Start/End: Original strand, 19794629 - 19794661
Alignment:
Q  83 taaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||||||||| |||||||||||    
T  19794629 taaggtaagggggttagtcttcatcataatcat 19794661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 115
Target Start/End: Original strand, 20627238 - 20627270
Alignment:
Q  83 taaggtaagggggttagtctttatcataatcat 115  Q
    |||||||| ||||||||||||||||||||||||    
T  20627238 taaggtaacggggttagtctttatcataatcat 20627270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 115
Target Start/End: Complemental strand, 22275077 - 22275045
Alignment:
Q  83 taaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||||| |||||||||||||||    
T  22275077 taaggtaagggggttagcctttatcataatcat 22275045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 299; Significance: 1e-168; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 9 - 319
Target Start/End: Complemental strand, 22963 - 22653
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22963 gagaagaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 22864  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22863 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatgaataattgttgctaaattcgtgctccaactttgatga 22764  T
Q  209 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22763 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 22664  T
Q  309 gtgaatttgac 319  Q
     ||||||||||    
T  22663 atgaatttgac 22653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 9 - 319
Target Start/End: Complemental strand, 27218 - 26908
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27218 gagaagaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 27119  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27118 taatcatgttccttctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 27019  T
Q  209 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27018 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 26919  T
Q  309 gtgaatttgac 319  Q
     ||||||||||    
T  26918 atgaatttgac 26908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 299; Significance: 1e-168; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 9 - 319
Target Start/End: Complemental strand, 5238510 - 5238200
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5238510 gagaagaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 5238411  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5238410 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 5238311  T
Q  209 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  5238310 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 5238211  T
Q  309 gtgaatttgac 319  Q
     ||||||||||    
T  5238210 atgaatttgac 5238200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 9 - 319
Target Start/End: Original strand, 24661088 - 24661398
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24661088 gagaagaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 24661187  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24661188 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 24661287  T
Q  209 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24661288 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 24661387  T
Q  309 gtgaatttgac 319  Q
     ||||||||||    
T  24661388 atgaatttgac 24661398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 9 - 319
Target Start/End: Complemental strand, 43685969 - 43685659
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43685969 gagaagaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 43685870  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43685869 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 43685770  T
Q  209 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  43685769 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 43685670  T
Q  309 gtgaatttgac 319  Q
     ||||||||||    
T  43685669 atgaatttgac 43685659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 9 - 319
Target Start/End: Original strand, 22907054 - 22907364
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22907054 gagaagaacttgaagaatccaattgggtaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 22907153  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22907154 taatcatgttcattctttgcaatttttcatgatttgtatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 22907253  T
Q  209 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22907254 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 22907353  T
Q  309 gtgaatttgac 319  Q
     ||||||||||    
T  22907354 atgaatttgac 22907364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 15 - 301
Target Start/End: Complemental strand, 17345987 - 17345700
Alignment:
Q  15 aacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatca 114  Q
    ||||||| ||||| | | ||| ||||||||||||| |||||||||    ||||||  |||||||| ||| ||||||||||||||||||| ||||||||||    
T  17345987 aacttgaggaatcaattggggtaagcttaggagctgaattgaagcaagagtttgggttaatcttcttcttaggtaagggggttagtcttcatcataatca 17345888  T
Q  115 tgttcattctttgcaatttttcatgatttggatgaa-atgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgt 213  Q
    ||||||||  ||||||||| ||||   ||| ||||| |||||||||| ||||| |||||||||||||||| |||||||||||| |||| ||||| |||||    
T  17345887 tgttcatttattgcaatttctcatttgttgtatgaatatgggttgaattgaataaatggataattgttgcgaaattcgtgctctaactgtgatgttatgt 17345788  T
Q  214 ttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgc 301  Q
    || ||||||||||||||| |||||||||||||||||||| |||| |||||||  | ||||| ||||||  ||||||||||||||||||    
T  17345787 ttatatgcatgaattgatgataattgtatgattgttggtgaaatcacatgttcaattatgtaaaaatgtgaagttatgaaaattgtgc 17345700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 38 - 316
Target Start/End: Original strand, 43373347 - 43373615
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 137  Q
    ||||||||||||||| ||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||  ||||| | || |||||   |    
T  43373347 agcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcatcattttgtgaaatttcaaa 43373446  T
Q  138 tgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataat 237  Q
    ||  ||| ||||| |   ||    || || |||||||||||  ||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||    
T  43373447 tg--ttgtatgaatt---tt----tgtat-aatggataattaatgctaaattcgtgctccaactgtgatgatacgtttgtatgcatgaattgatgataat 43373536  T
Q  238 tgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    | ||||||||||||| ||||||||||||  ||||||| ||||||| ||||| ||||||||||||  ||| |||||||||    
T  43373537 tatatgattgttggtgaaattacatgttcaaatatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattt 43373615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 169 - 316
Target Start/End: Original strand, 16193716 - 16193863
Alignment:
Q  169 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 268  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||  |    
T  16193716 atggatgattgttgctaaattcgtgctccaactatgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggggaaattacatgttcaa 16193815  T
Q  269 atatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||||| ||||||| ||||| ||||||||||||  ||| |||||||||    
T  16193816 atatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattt 16193863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 38 - 316
Target Start/End: Original strand, 24928671 - 24928938
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 137  Q
    ||||||||||||||||||||| ||| ||| ||  ||||||| ||||||||||| ||||||||||||||||||||||||  ||||| | || |||||| ||    
T  24928671 agcttaggagctaaattgaagtctaagttgggattaatctttatctaaggtaatggggttagtctttatcataatcatcgtcattttgtgaaatttt-ca 24928769  T
Q  138 tgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataat 237  Q
        ||| ||||| |         ||| |  ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||    
T  24928770 aatgttgtatgaattt--------tgatt--atggataattgttgctaaattcgtgctccaactgtgattatatgtttgtatgcatgaattgatgataat 24928859  T
Q  238 tgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    ||||||||||||||| ||||||||||||  |||| |   |||||| ||||| ||||||||||||  ||| |||||||||    
T  24928860 tgtatgattgttggtgaaattacatgttcaaataggaacaaatgataagttgtgaaaattgtgctcaattggtgaattt 24928938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 169 - 316
Target Start/End: Original strand, 16404975 - 16405122
Alignment:
Q  169 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 268  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  |    
T  16404975 atggataattattgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaa 16405074  T
Q  269 atatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    ||| |   |||||  ||||| ||||||||||||  ||| |||||||||    
T  16405075 ataggaacaaatgttaagttgtgaaaattgtgctcaattggtgaattt 16405122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 6774258 - 6774393
Alignment:
Q  181 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 280  Q
    ||||| ||||||||||  ||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||| |||||    
T  6774258 tgctagattcgtgctcttactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaat 6774357  T
Q  281 gaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    || ||||| ||||||||||||  ||| |||||||||    
T  6774358 gataagttgtgaaaattgtgctcaattggtgaattt 6774393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 185 - 316
Target Start/End: Original strand, 21844576 - 21844707
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaa 284  Q
    ||||||||||||   || ||||| ||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||| ||||||| ||||||| |    
T  21844576 aaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgatgattgtatgattgttggtgaaattacatgtttaaatatgtaaaaatgata 21844675  T
Q  285 agttatgaaaattgtgcaaaatgggtgaattt 316  Q
    ||||||||| |||||||  ||| |||||||||    
T  21844676 agttatgaatattgtgctcaattggtgaattt 21844707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 181 - 316
Target Start/End: Complemental strand, 24549233 - 24549098
Alignment:
Q  181 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 280  Q
    ||||| ||||||||||  ||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||| |||||    
T  24549233 tgctagattcgtgctcttactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaat 24549134  T
Q  281 gaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    || ||||| ||||||| ||||  ||| |||||||||    
T  24549133 gataagttgtgaaaatggtgctcaattggtgaattt 24549098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 185 - 316
Target Start/End: Original strand, 21851969 - 21852100
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaa 284  Q
    ||||||||||||   || ||||| ||||||||||||||||||||||| || ||||||||||||||||| |||||| |||||| ||||||| ||||||| |    
T  21851969 aaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgatgattgtatgattgttggtgaaattaaatgtttaaatatgtaaaaatgata 21852068  T
Q  285 agttatgaaaattgtgcaaaatgggtgaattt 316  Q
    ||||||||| |||||||  ||| |||||||||    
T  21852069 agttatgaatattgtgctcaattggtgaattt 21852100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 16872894 - 16873024
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||    |||||   |||||||| ||||||||||||||||||||  ||||||    
T  16872894 gagaagaacttgaagaatccaattgggtaagcttaggagctaaattgaagcaagagtttgagttaatcttcttctaaggtaagggggttagttattatca 16872993  T
Q  109 taatcatgttcattctttgcaatttttcatg 139  Q
    ||||||||| || | |||||| ||| |||||    
T  16872994 taatcatgtacaatttttgcattttctcatg 16873024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 24385607 - 24385684
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||| ||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  24385607 agcttaggagctaaagtgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 24385684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 181 - 316
Target Start/End: Complemental strand, 30120974 - 30120839
Alignment:
Q  181 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 280  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||| ||  || |||||||||||||||| ||||||||||||   |||||  |||||    
T  30120974 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaatttatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 30120875  T
Q  281 gaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    || |||||||||| |||||||  ||| |||||||||    
T  30120874 gataagttatgaatattgtgctcaattggtgaattt 30120839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 16674392 - 16674527
Alignment:
Q  181 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 280  Q
    ||||||||||||||||   || ||||| ||||||| |||||||||||| ||  || |||||||||||||||| ||||||||||||   |||||  |||||    
T  16674392 tgctaaattcgtgctctttctgtgatgttatgtttttatgcatgaatttatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 16674491  T
Q  281 gaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    || |||||||||| |||||||  ||| |||||||||    
T  16674492 gataagttatgaatattgtgcttaattggtgaattt 16674527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 16193598 - 16193674
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||||||||||||| ||| ||  | ||||| ||||||||||| ||||||||||||||||||||||||    
T  16193598 agcttaggagctaaattgaagcctaagttgggattcatctttatctaaggtaa-ggggttagtctttatcataatcat 16193674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 41506664 - 41506741
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||||| |||||||||||||||||| ||||||  ||||| | ||||||||||||||||||||| || |||||||||||    
T  41506664 agcttaagagctaaattgaagcctaagtttgggttaatccttatctaaggtaagggggttagttttcatcataatcat 41506741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 38 - 114
Target Start/End: Original strand, 7000475 - 7000551
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatca 114  Q
    ||||||||||||||||||||||||| ||||||  ||||| | |||||| |||||||||||||| || ||||||||||    
T  7000475 agcttaggagctaaattgaagcctaagtttgggttaatccttatctaaagtaagggggttagttttcatcataatca 7000551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 41 - 116
Target Start/End: Original strand, 21494314 - 21494389
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatg 116  Q
    |||||||||||| ||||||||| ||||||  ||||| | ||||||||||||||||||||||||  |||||||||||    
T  21494314 ttaggagctaaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcttcataatcatg 21494389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 41 - 139
Target Start/End: Original strand, 13662140 - 13662238
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    ||||||||| |||||||||    ||||||  |||||||| ||||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  13662140 ttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 13662238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 41 - 139
Target Start/End: Original strand, 13720803 - 13720901
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    ||||||||| |||||||||    ||||||  |||||||| ||||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  13720803 ttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 13720901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 41 - 115
Target Start/End: Complemental strand, 22886728 - 22886654
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||| |||||| || ||||||  ||||| | | |||||||||||||||||||||| |||||||||||    
T  22886728 ttaggagctaaagtgaagcttaagtttggattaatcattacctaaggtaagggggttagtcttaatcataatcat 22886654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 41 - 196
Target Start/End: Complemental strand, 2545339 - 2545183
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatg--ttcattctttgcaatttttcat 138  Q
    |||||||||||| |||||| ||  ||||   ||||| | | |||||||||||||||||||||| ||||||||||||  |   || ||||||||||| | |    
T  2545339 ttaggagctaaagtgaagcttaaatttgaattaatcataacctaaggtaagggggttagtcttcatcataatcatgattgttttgtttgcaattttcctt 2545240  T
Q  139 gatttggatgaaatgggttgaaatgaatgaatggataattgttgct-aaattcgtgctc 196  Q
    |  ||| ||||||||||||||   |||||||| ||||||||||| | ||||||||||||    
T  2545239 g--ttgtatgaaatgggttgattggaatgaattgataattgttgttaaaattcgtgctc 2545183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 37 - 266
Target Start/End: Original strand, 22006129 - 22006347
Alignment:
Q  37 aagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttc 136  Q
    ||||||||||||| |||||||||    |||||   |||||||| || |||||||||||||||||  ||||||||||||||| || | |||||| ||| ||    
T  22006129 aagcttaggagctgaattgaagcaagagtttgagttaatcttcttcaaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctc 22006228  T
Q  137 atgatttggatg-aaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataata 235  Q
    |||  ||| ||| ||||||||||          ||| | ||||||||||||||||||||||   || ||||| ||| ||  | ||||||||||||| ||     
T  22006229 atg--ttgtatgaaaatgggttg----------atgaacaattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattgatgatt 22006316  T
Q  236 attgtatgattgttggttaaattacatgttt 266  Q
    || ||||| |||| ||| |||||||||||||    
T  22006317 atggtatgtttgtgggtgaaattacatgttt 22006347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 3431134 - 3431245
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat-gttcattctttgcaatttttcatg 139  Q
    |||||||||||| ||||||| | ||||||  | ||| | | |||||||||||||||||||||| |||||||||||  ||  || ||||||||||||| ||    
T  3431134 ttaggagctaaagtgaagcccaagtttggattgatcataacctaaggtaagggggttagtcttcatcataatcataattgtttgtttgcaatttttcttg 3431233  T
Q  140 atttggatgaaa 151  Q
     |||| ||||||    
T  3431234 gtttgtatgaaa 3431245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 265
Target Start/End: Complemental strand, 26011741 - 26011660
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattgtatgattgttggttaaattacatgtt 265  Q
    |||||||||||| || | |||||||||||||| ||||||| ||||| | ||||||| ||  |||||||| ||||||||||||    
T  26011741 aaattcgtgctctaattatgatgatatgtttgaatgcatgaaattggtgataattgaattgttgttggtgaaattacatgtt 26011660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 316
Target Start/End: Original strand, 222754 - 222826
Alignment:
Q  244 attgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    ||||||||| ||||||||||||   |||||  ||||||| |||||||||| ||||||| |||| |||||||||    
T  222754 attgttggtgaaattacatgttcatatatgcaaaaatgataagttatgaagattgtgctaaattggtgaattt 222826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 316
Target Start/End: Original strand, 736377 - 736449
Alignment:
Q  244 attgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    ||||||||| ||||||||||||   |||||  ||||||| |||||||||| ||||||| |||| |||||||||    
T  736377 attgttggtgaaattacatgttcatatatgcaaaaatgataagttatgaagattgtgctaaattggtgaattt 736449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 316
Target Start/End: Original strand, 860272 - 860344
Alignment:
Q  244 attgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    ||||||||| ||||||||||||   |||||  ||||||| |||||||||| ||||||| |||| |||||||||    
T  860272 attgttggtgaaattacatgttcatatatgcaaaaatgataagttatgaagattgtgctaaattggtgaattt 860344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 115
Target Start/End: Original strand, 24716762 - 24716794
Alignment:
Q  83 taaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||||||||||||||||||||||||    
T  24716762 taaggtaagggggttagtctttatcataatcat 24716794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 271278 - 271333
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  271278 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 271333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Complemental strand, 644642 - 644587
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  644642 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 644587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Complemental strand, 830377 - 830322
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  830377 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 830322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 15319077 - 15319132
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  15319077 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 15319132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 15499446 - 15499501
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  15499446 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 15499501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 266
Target Start/End: Complemental strand, 16195489 - 16195398
Alignment:
Q  175 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 266  Q
    |||||||||||||||||| |||   || ||||| ||||||  | ||||||||||||| || || ||||| |||| ||| |||||||||||||    
T  16195489 aattgttgctaaattcgttctcgtgctgtgatgctatgttcttgtgcatgaattgatgattatggtatgtttgtgggtgaaattacatgttt 16195398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 23226076 - 23226131
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattg 239  Q
    ||||| |||||| |||| |||||||||||||||||||||| ||||||| |||||||    
T  23226076 aaatttgtgctctaactatgatgatatgtttgtatgcatgaaattgatgataattg 23226131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 196
Target Start/End: Complemental strand, 18612693 - 18612643
Alignment:
Q  146 atgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 196  Q
    ||||||||||||||   |||||||| ||||||||||| |||||||||||||    
T  18612693 atgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 18612643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 196
Target Start/End: Complemental strand, 22147725 - 22147675
Alignment:
Q  146 atgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 196  Q
    ||||||||||||||   |||||||| ||||||||||| |||||||||||||    
T  22147725 atgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 22147675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 16674296 - 16674341
Alignment:
Q  72 taatcttcatctaaggtaagggggttagtctttatcataatcatgt 117  Q
    |||||||| ||||||||||||||||||||  |||||| ||||||||    
T  16674296 taatcttcttctaaggtaagggggttagttattatcacaatcatgt 16674341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 23150026 - 23149985
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa 226  Q
    ||||||||||||||| | |||||||||||||| |||||||||    
T  23150026 aaattcgtgctccaattatgatgatatgtttgaatgcatgaa 23149985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 115
Target Start/End: Complemental strand, 274798 - 274766
Alignment:
Q  83 taaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||||||||| ||||||||||||||    
T  274798 taaggtaagggggttagtttttatcataatcat 274766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 115
Target Start/End: Original strand, 641051 - 641083
Alignment:
Q  83 taaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||||||||| ||||||||||||||    
T  641051 taaggtaagggggttagtttttatcataatcat 641083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 115
Target Start/End: Original strand, 826857 - 826889
Alignment:
Q  83 taaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||||||||| ||||||||||||||    
T  826857 taaggtaagggggttagtttttatcataatcat 826889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 265
Target Start/End: Complemental strand, 17285450 - 17285370
Alignment:
Q  186 aattcgtgctccaactttgatgatatgtttgtatgcatgaa-ttgataataattgtatgattgttggttaaattacatgtt 265  Q
    |||||||||||||| | |||||||||||||  ||||||||| ||| | ||||||| ||  |||||||| ||||| ||||||    
T  17285450 aattcgtgctccaattatgatgatatgtttaaatgcatgaagttgttgataattgaattgttgttggtgaaatttcatgtt 17285370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 117
Target Start/End: Complemental strand, 24549319 - 24549283
Alignment:
Q  81 tctaaggtaagggggttagtctttatcataatcatgt 117  Q
    ||||||||||||||||||||  |||||||||||||||    
T  24549319 tctaaggtaagggggttagtgattatcataatcatgt 24549283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 299; Significance: 1e-168; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 9 - 319
Target Start/End: Original strand, 15441404 - 15441714
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15441404 gagaagaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 15441503  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15441504 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 15441603  T
Q  209 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15441604 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 15441703  T
Q  309 gtgaatttgac 319  Q
     ||||||||||    
T  15441704 atgaatttgac 15441714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 9 - 319
Target Start/End: Original strand, 30261969 - 30262279
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30261969 gagaagaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 30262068  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30262069 taatcatgttcattctttgcaatttttcatgatttgtatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 30262168  T
Q  209 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  30262169 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 30262268  T
Q  309 gtgaatttgac 319  Q
     ||||||||||    
T  30262269 atgaatttgac 30262279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 9 - 319
Target Start/End: Complemental strand, 11516649 - 11516340
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11516649 gagaagaacttgaagaatcca-ttgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 11516551  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11516550 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 11516451  T
Q  209 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  11516450 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 11516351  T
Q  309 gtgaatttgac 319  Q
     ||||||||||    
T  11516350 atgaatttgac 11516340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 9 - 319
Target Start/End: Complemental strand, 7293439 - 7293129
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7293439 gagaagaacttgaagaatccaattgggtaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 7293340  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7293339 taatcatgttcattctttgcaatttttcatgatttgtatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 7293240  T
Q  209 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 308  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7293239 tatgtttgtatgcatgaattaataataattgtatgattgttggttaaattacatgtttaaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 7293140  T
Q  309 gtgaatttgac 319  Q
     ||||||||||    
T  7293139 atgaatttgac 7293129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 9 - 315
Target Start/End: Original strand, 25292179 - 25292484
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25292179 gagaagaacttgaggaatc-aattgggtaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaagataagggggttagtctttatca 25292277  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    |||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25292278 taatcaagttcattctttgcaatttttcaagatttgtatgaaatgggttgaaatgaatgaatggataattgttgctaaatttgtgctccaactttgatga 25292377  T
Q  209 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 308  Q
    |||||||||||| |||||||| | || ||||||||||||||||| ||||||||||||| ||||||| |||| || ||| |||||| |||||||  ||| |    
T  25292378 tatgtttgtatgtatgaattgttgatgattgtatgattgttggtgaaattacatgtttaaatatgtaaaaaggataagctatgaatattgtgctcaattg 25292477  T
Q  309 gtgaatt 315  Q
    |||||||    
T  25292478 gtgaatt 25292484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 9 - 211
Target Start/End: Original strand, 14113829 - 14114031
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14113829 gagaagaacttgaagaatccaattgggtaagcttagaagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 14113928  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14113929 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 14114028  T
Q  209 tat 211  Q
    |||    
T  14114029 tat 14114031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 9 - 211
Target Start/End: Original strand, 14423480 - 14423681
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  14423480 gagaagaacttgaagaatccaattgggtaagcttagaagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctt-atca 14423578  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14423579 taatcatgttcattctttgcaatttttcatgatttgtatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 14423678  T
Q  209 tat 211  Q
    |||    
T  14423679 tat 14423681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 17 - 316
Target Start/End: Complemental strand, 13321433 - 13321131
Alignment:
Q  17 cttgaagaatccaattggga-aagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||| |||||||  |||||||||||||||| ||||||||||||||||  ||||| | |||||||||||||||||||||||| |||||||||||    
T  13321433 cttgaagaatcaaattggggtaagcttaggagctaaagtgaagcctaggtttggattaatcattatctaaggtaagggggttagtcttcatcataatcat 13321334  T
Q  116 gttcattctttgcaatttttcatgatttggatgaa-atgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtt 214  Q
    |||||||  ||||||||| ||||   ||| ||||| |||||||||| ||||| | ||||||||||||||||||||||||||| |||| ||||| ||||||    
T  13321333 gttcatttattgcaatttctcatttgttgtatgaatatgggttgaattgaataagtggataattgttgctaaattcgtgctctaactgtgatgttatgtt 13321234  T
Q  215 tgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaa--tatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtga 312  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||  |||||  |||||  |||||||| |||||||||  ||| |||||    
T  13321233 tgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgtttcaaagtatgtataaatgtcaagttatg-aaattgtgctcaattggtga 13321135  T
Q  313 attt 316  Q
    ||||    
T  13321134 attt 13321131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 41 - 300
Target Start/End: Original strand, 47480902 - 47481162
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatga 140  Q
    ||||||| |||| ||||||||| ||||||  ||||| | |||||||||||||||||||||||| ||||||||||| ||||||  ||||||||| ||||      
T  47480902 ttaggaggtaaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcatattcatttattgcaatttctcattt 47481001  T
Q  141 tttggatgaa-atgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattg 239  Q
     ||| ||||| |||||||||| ||||| ||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||| |||||||    
T  47481002 gttgtatgaatatgggttgaattgaataaatggataattgttgctaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattgatgataattg 47481101  T
Q  240 tatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtg 300  Q
    |||||||||| || ||||||||||||  ||||||| ||||||| ||||| |||||||||||    
T  47481102 tatgattgttagtgaaattacatgttcaaatatgtaaaaatgataagttgtgaaaattgtg 47481162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 38 - 316
Target Start/End: Complemental strand, 16212148 - 16211882
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 137  Q
    ||||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||||||  ||||| | || |||||   |    
T  16212148 agcttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcatcatcattttgtgaaatttcaaa 16212049  T
Q  138 tgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataat 237  Q
    ||  ||| ||||| |  | | |          |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  16212048 tg--ttgtatgaattttgctta----------tggacaattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataat 16211961  T
Q  238 tgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||| ||||||| || ||||| ||||||  ||||||| ||||||| ||||| ||||||||||||  ||| |||||||||    
T  16211960 tgtaagattgtttgtgaaattgcatgttcaaatatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattt 16211882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 38 - 316
Target Start/End: Original strand, 11580616 - 11580886
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 137  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| ||||||||||||||| ||||||||||||||||||||  ||||| |||| || ||||||    
T  11580616 agcttaggagctaaattgaagcctaagttgggattaatcttaatctaaggtaaggggattagtctttatcataatcatcatcatt-tttgtaaattttca 11580714  T
Q  138 tgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataat 237  Q
        ||| ||||| |   ||    || || ||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||    
T  11580715 aatgttgtatgaattt--tt----tgcat-aatggataattattgctaaattcgtgctccaactgtgataatatgtttgtatgcatgaattgatgataat 11580807  T
Q  238 tgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    ||||||||||||||| ||||||||||||  |||| |   |||||| ||||| ||||||||||||  ||| |||||||||    
T  11580808 tgtatgattgttggtgaaattacatgttcaaataggaacaaatgataagttgtgaaaattgtgctcaattggtgaattt 11580886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 38 - 316
Target Start/End: Complemental strand, 36053048 - 36052780
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 137  Q
    ||||||||||||||| ||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||  ||||| | || |||||   |    
T  36053048 agcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcatcattttgtgaaatttcaaa 36052949  T
Q  138 tgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataat 237  Q
    ||  ||| ||||| |   ||    || || ||||||||||||||||||||||  | |||||||| |||||||| |||||||||||||||||||| |||||    
T  36052948 tg--ttgtatgaatt---tt----tgtat-aatggataattgttgctaaatttatactccaactgtgatgatacgtttgtatgcatgaattgatgataat 36052859  T
Q  238 tgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    | ||||||||||||| ||||||||||||  ||||||| ||||||| ||||| ||||||||||||  ||| |||||||||    
T  36052858 tatatgattgttggtaaaattacatgttcaaatatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattt 36052780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 37 - 316
Target Start/End: Original strand, 13036892 - 13037161
Alignment:
Q  37 aagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttc 136  Q
    |||||||||||||||||||||||||| ||| ||  ||||||| |||||||||||||||||||||||| | |||||||||  |||||  ||| || |||||    
T  13036892 aagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtcttcaccataatcatcatcatt--ttgtaaattttc 13036989  T
Q  137 atgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataa 236  Q
    |    ||| ||||| |   ||    || || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  13036990 aaatgttgtatgaatt---tt----tgcat-aatggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataa 13037081  T
Q  237 ttgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||||||||||||| | ||||| ||||||  |||| |   |||||| ||||| ||||||||||||  ||| |||||||||    
T  13037082 ttgtatgattgttgatgaaattgcatgttcaaataggaacaaatgataagttgtgaaaattgtgctcaattggtgaattt 13037161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 175 - 316
Target Start/End: Original strand, 18253841 - 18253982
Alignment:
Q  175 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgt 274  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||| |||    
T  18253841 aattgttactaaattcgtgctccaactgtaatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatgtgt 18253940  T
Q  275 gaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
     ||||||| ||||| ||||||||||||  ||| |||||||||    
T  18253941 aaaaatgataagttgtgaaaattgtgctcaattggtgaattt 18253982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 187 - 316
Target Start/End: Original strand, 16478968 - 16479097
Alignment:
Q  187 attcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaag 286  Q
    ||||||||||  |||  |||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||| ||||||| |||    
T  16478968 attcgtgctcttactgcgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgataag 16479067  T
Q  287 ttatgaaaattgtgcaaaatgggtgaattt 316  Q
    || ||||||||||||  ||| |||||||||    
T  16479068 ttgtgaaaattgtgctcaattggtgaattt 16479097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 169 - 297
Target Start/End: Complemental strand, 3060229 - 3060101
Alignment:
Q  169 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 268  Q
    ||||||||||||||||||||||||||||||||| |||| |||| ||||||||||| ||||||| |||||||||  | ||||||| ||||||||||||  |    
T  3060229 atggataattgttgctaaattcgtgctccaactgtgataatatatttgtatgcattaattgatgataattgtaatactgttggtgaaattacatgttcaa 3060130  T
Q  269 atatgtgaaaatgaaaagttatgaaaatt 297  Q
    |||||| ||||||| || || ||||||||    
T  3060129 atatgtaaaaatgataaattgtgaaaatt 3060101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 185 - 316
Target Start/End: Complemental strand, 13572924 - 13572793
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaa 284  Q
    ||||||||||||   || ||||| ||||||||||||||||||||||| || ||||| ||||||||||| ||||||||||||| ||||||| ||||||| |    
T  13572924 aaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgatgattgtgtgattgttggtgaaattacatgtttaaatatgtaaaaatgata 13572825  T
Q  285 agttatgaaaattgtgcaaaatgggtgaattt 316  Q
    ||||||||| |||||||  ||| |||||||||    
T  13572824 agttatgaatattgtgctcaattggtgaattt 13572793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 139
Target Start/End: Complemental strand, 13758783 - 13758653
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||    ||||||  |||||||| ||||||||||||||||||||  ||||||    
T  13758783 gagaagaacttgaagaatccaattgggtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatca 13758684  T
Q  109 taatcatgttcattctttgcaatttttcatg 139  Q
    ||||||||| || | |||||| ||| |||||    
T  13758683 taatcatgtacaatttttgcattttctcatg 13758653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 181 - 316
Target Start/End: Complemental strand, 10989661 - 10989526
Alignment:
Q  181 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 280  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||||  || |||||||||||||||| ||||||||||||   |||||  |||||    
T  10989661 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 10989562  T
Q  281 gaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    || |||||||||| |||||||  ||| |||||||||    
T  10989561 gataagttatgaatattgtgctcaattggtgaattt 10989526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 13911024 - 13911159
Alignment:
Q  181 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 280  Q
    ||||||||||||||||    | ||||| |||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||   |||||  |||||    
T  13911024 tgctaaattcgtgctcttgttgtgatgttatgtttgtatgcatgaattgatgttaattgtatgattgttggtgaaattacatgttcatatatgcaaaaat 13911123  T
Q  281 gaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    || |||||||||| ||| |||  ||| |||||||||    
T  13911124 gataagttatgaatattatgctcaattggtgaattt 13911159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 175 - 300
Target Start/End: Complemental strand, 2437715 - 2437590
Alignment:
Q  175 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgt 274  Q
    |||| |||||||||||||||||    | ||||| |||||||||||||||||||||||  || |||||||||||||||| ||||||||||||   |||||     
T  2437715 aattcttgctaaattcgtgctcttgttgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgc 2437616  T
Q  275 gaaaatgaaaagttatgaaaattgtg 300  Q
     ||||||| |||||||||| ||||||    
T  2437615 aaaaatgataagttatgaagattgtg 2437590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 42056143 - 42056220
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||| ||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  42056143 agcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 42056220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 2029319 - 2029244
Alignment:
Q  40 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||||||||||| ||| |   ||||||| ||||||||||||||||||||||||||||||||||||    
T  2029319 cttaggagctaaattgaagcctaagttggaattaatctttatctaaggtaagggggttagtctttatcataatcat 2029244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 3049980 - 3049905
Alignment:
Q  40 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||| |||||||||||||||||| ||| ||  ||||||| ||||||||||||||||||||| ||||||||||||||    
T  3049980 cttaagagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtttttatcataatcat 3049905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 168 - 297
Target Start/End: Original strand, 295965 - 296094
Alignment:
Q  168 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttg 267  Q
    |||| ||||||||||||||||||||| || || |  | || ||||||||| ||||||||| ||| |||||  ||||||||||||| ||||| ||||||      
T  295965 aatgaataattgttgctaaattcgtgttctaattgaggtgttatgtttgtgtgcatgaatcgatgataatgttatgattgttggtgaaatttcatgttga 296064  T
Q  268 aatatgtgaaaatgaaaagttatgaaaatt 297  Q
    | ||||| ||||||| ||||||| ||||||    
T  296065 attatgtaaaaatgagaagttataaaaatt 296094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 25124527 - 25124450
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||| ||||||||| |||| |  ||||| | |||||||||||||||||||||||| |||||||||||    
T  25124527 agcttaggagctaaagtgaagcctaagtttagattaatcattatctaaggtaagggggttagtcttcatcataatcat 25124450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 2190040 - 2190117
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||| |||| ||||||||| ||| ||  ||||||| ||||||||||||| ||||||| ||||||||||||||    
T  2190040 agcttaggagttaaagtgaagcctaagttgggattaatctttatctaaggtaaggcggttagtttttatcataatcat 2190117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 266
Target Start/End: Original strand, 18979895 - 18980110
Alignment:
Q  40 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||| |||||||||    ||||||  |||||||| ||||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  18979895 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 18979994  T
Q  140 atttggatg-aaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataatt 238  Q
      ||| ||| ||||||||||          ||| | ||||||||||||||||||||||   || ||||| ||| ||  | ||||||||||||| || ||     
T  18979995 --ttgtatgaaaatgggttg----------atgaacaattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattgatgattatg 18980082  T
Q  239 gtatgattgttggttaaattacatgttt 266  Q
    ||||| |||| ||| |||||||||||||    
T  18980083 gtatgtttgtgggtgaaattacatgttt 18980110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 139
Target Start/End: Complemental strand, 15927950 - 15927851
Alignment:
Q  40 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||| |||||||||    ||||||  |||||||| ||||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  15927950 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 15927851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 37 - 139
Target Start/End: Original strand, 15759985 - 15760087
Alignment:
Q  37 aagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttc 136  Q
    ||||||||||||| |||||||||    |||||   |||||||| ||||||||||||||||||||  | |||||||||||||||| | |||||| ||| ||    
T  15759985 aagcttaggagctgaattgaagcaagagtttgtgttaatcttcttctaaggtaagggggttagttatcatcataatcatgttcaatttttgcattttctc 15760084  T
Q  137 atg 139  Q
    |||    
T  15760085 atg 15760087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 266
Target Start/End: Original strand, 15950667 - 15950880
Alignment:
Q  42 taggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgat 141  Q
    |||||||| |||||||||    ||||||  |||||||| || |||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||      
T  15950667 taggagctgaattgaagcaagagtttgggttaatcttcttcaaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg-- 15950764  T
Q  142 ttggatg-aaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgt 240  Q
    ||| ||| ||||||||||          ||| | ||||||||||||||||||||||   || ||||| ||| ||  | ||||||||||||| || || ||    
T  15950765 ttgtatgaaaatgggttg----------atgaacaattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattgatgattatggt 15950854  T
Q  241 atgattgttggttaaattacatgttt 266  Q
    ||| |||| ||| |||||||||||||    
T  15950855 atgtttgtgggtgaaattacatgttt 15950880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 265
Target Start/End: Original strand, 48622664 - 48622754
Alignment:
Q  175 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtt 265  Q
    ||||| ||||||||||||||||  ||| ||||||||| ||  | ||||||||||||| || || ||||| |||| ||| ||||||||||||    
T  48622664 aattgatgctaaattcgtgctcttactgtgatgatattttcttgtgcatgaattgatgattatggtatgtttgtgggtgaaattacatgtt 48622754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 10000245 - 10000318
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatca 114  Q
    |||||||||||| ||||||||| |||  |  ||| | |||||||||||||||||||| ||||| ||||||||||    
T  10000245 ttaggagctaaagtgaagcctaagttaagattaaacatcatctaaggtaagggggtttgtcttcatcataatca 10000318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 13573056 - 13572979
Alignment:
Q  40 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgt 117  Q
    |||||||||| |||||||||    ||||||  |||||||| ||||||||||||||||||||  |||||| ||||||||    
T  13573056 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcacaatcatgt 13572979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 139
Target Start/End: Original strand, 14250806 - 14250871
Alignment:
Q  74 atcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||| ||||||||||||||||||||  | ||| |||||||||||||| |||||| ||| |||||    
T  14250806 atcttcttctaaggtaagggggttagttatcatcgtaatcatgttcattttttgcattttctcatg 14250871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 15709546 - 15709469
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||| ||||||||| |||  |  ||||| | |||||||||||| || |||||||| |||||||||||    
T  15709546 agcttaggagctaaagtgaagcctaagttgaggttaatcataatctaaggtaagaggattagtcttcatcataatcat 15709469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 265
Target Start/End: Original strand, 16914928 - 16915009
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattgtatgattgttggttaaattacatgtt 265  Q
    |||||||||||| || | |||||||||||||| ||||||| ||||||| ||||||| ||  |||||||| ||||| ||||||    
T  16914928 aaattcgtgctctaattatgatgatatgtttgaatgcatgaaattgatgataattgaattgttgttggtgaaattgcatgtt 16915009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 371491 - 371380
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat-gttcattctttgcaatttttcatg 139  Q
    |||||||||||| ||||||| | |||||   | ||| | | |||||||||||||||||||||| |||||||||||  ||  || ||||||||||||| ||    
T  371491 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttagtcttcatcataatcataattgtttgtttgcaatttttcttg 371392  T
Q  140 atttggatgaaa 151  Q
     |||| ||||||    
T  371391 gtttgtatgaaa 371380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Complemental strand, 7823066 - 7823011
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  7823066 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 7823011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Complemental strand, 7830377 - 7830322
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  7830377 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 7830322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 27101555 - 27101610
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  27101555 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 27101610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 27108903 - 27108958
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  27108903 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 27108958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Complemental strand, 27176771 - 27176716
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  27176771 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 27176716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 38783647 - 38783702
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  38783647 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 38783702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 36024530 - 36024452
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaag-ggggttagtctttatcataatcat 115  Q
    |||||| |||||||| ||||||||| |||  |  ||||| | |||||||||||| |||||||||||| |||||||||||    
T  36024530 agcttatgagctaaagtgaagcctaagttgaggttaatcataatctaaggtaaggggggttagtcttcatcataatcat 36024452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 265
Target Start/End: Complemental strand, 9611555 - 9611474
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattgtatgattgttggttaaattacatgtt 265  Q
    |||||||||||| || | |||||||||||||| ||||||| ||||| | ||||||| ||  |||||||| ||||| ||||||    
T  9611555 aaattcgtgctctaattatgatgatatgtttgaatgcatgaaattggtgataattgaattgttgttggtgaaattgcatgtt 9611474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 265
Target Start/End: Complemental strand, 9839126 - 9839045
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattgtatgattgttggttaaattacatgtt 265  Q
    |||||||||||| || | |||||||||||||| ||||||| ||||| | ||||||| ||  |||||||| ||||| ||||||    
T  9839126 aaattcgtgctctaattatgatgatatgtttgaatgcatgaaattggtgataattgaattgttgttggtgaaattgcatgtt 9839045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 48622541 - 48622614
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatca 114  Q
    |||||||||||| ||||||||| |||  |  ||| | |||||||||||||||||||| || || ||||||||||    
T  48622541 ttaggagctaaagtgaagcctaagttaagattaaacatcatctaaggtaagggggtttgttttcatcataatca 48622614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 115
Target Start/End: Complemental strand, 126770 - 126738
Alignment:
Q  83 taaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||||||||| ||||||||||||||    
T  126770 taaggtaagggggttagtttttatcataatcat 126738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 265
Target Start/End: Complemental strand, 13377775 - 13377695
Alignment:
Q  186 aattcgtgctccaactttgatgatatgtttgtatgcatgaa-ttgataataattgtatgattgttggttaaattacatgtt 265  Q
    |||||||||||||| | ||||| |||||||| ||||||||| ||| | ||||||| ||  |||||||| ||||| ||||||    
T  13377775 aattcgtgctccaattatgatgttatgtttgaatgcatgaagttgttgataattgaattgttgttggtgaaatttcatgtt 13377695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 115
Target Start/End: Original strand, 15516765 - 15516793
Alignment:
Q  87 gtaagggggttagtctttatcataatcat 115  Q
    |||||||||||||||||||||||||||||    
T  15516765 gtaagggggttagtctttatcataatcat 15516793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 17817315 - 17817363
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaag 86  Q
    |||||| |||||||||||||||||| ||| ||  |||||||||||||||    
T  17817315 agcttacgagctaaattgaagcctaagttgggattaatcttcatctaag 17817363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 19049686 - 19049638
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaag 86  Q
    |||||| |||||||||||||||||| ||| ||  |||||||||||||||    
T  19049686 agcttacgagctaaattgaagcctaagttgggattaatcttcatctaag 19049638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 115
Target Start/End: Original strand, 32493946 - 32493978
Alignment:
Q  83 taaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||||||||| ||||||||||||||    
T  32493946 taaggtaagggggttagtttttatcataatcat 32493978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 299; Significance: 1e-168; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 9 - 319
Target Start/End: Complemental strand, 20623392 - 20623082
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20623392 gagaagaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 20623293  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20623292 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 20623193  T
Q  209 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20623192 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 20623093  T
Q  309 gtgaatttgac 319  Q
     ||||||||||    
T  20623092 atgaatttgac 20623082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 9 - 319
Target Start/End: Original strand, 21233368 - 21233678
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21233368 gagaagaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 21233467  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21233468 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 21233567  T
Q  209 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21233568 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 21233667  T
Q  309 gtgaatttgac 319  Q
     ||||||||||    
T  21233668 atgaatttgac 21233678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 9 - 319
Target Start/End: Complemental strand, 16536620 - 16536310
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16536620 gagaagaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaagataagggggttagtctttatca 16536521  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16536520 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 16536421  T
Q  209 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 308  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16536420 tatgtttgtatgcatgaatttataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 16536321  T
Q  309 gtgaatttgac 319  Q
     ||||||||||    
T  16536320 atgaatttgac 16536310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 9 - 319
Target Start/End: Complemental strand, 37053167 - 37052857
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37053167 gagaagaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 37053068  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37053067 taatcatgttcattctttgcaatttttcatgatttggatgagatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 37052968  T
Q  209 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  37052967 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtggaaatgaaaagttatgaaaattgtgcaaaatgg 37052868  T
Q  309 gtgaatttgac 319  Q
     ||||||||||    
T  37052867 atgaatttgac 37052857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 16 - 315
Target Start/End: Original strand, 25900253 - 25900552
Alignment:
Q  16 acttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25900253 acttgaagaatccaattgggaaagcttaggagctaaattaaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 25900352  T
Q  116 gttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgttt 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25900353 gttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaacggataattgttgctaaattcgtgctccaactttgatgatatgttt 25900452  T
Q  216 gtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaatt 315  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  25900453 gtatgcatgaattgatgataattgtatgattgttggttaaattatatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatggatgaatt 25900552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 41 - 301
Target Start/End: Complemental strand, 34939669 - 34939408
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatga 140  Q
    |||||||||||| ||||| ||| || ||   ||||| | | ||||||||||||||||||| ||  |||||||||||||||||  ||||||||| ||||      
T  34939669 ttaggagctaaagtgaagtctaagtgtgaattaatcataacctaaggtaagggggttagtgttcttcataatcatgttcatttattgcaatttctcattt 34939570  T
Q  141 tttggatgaa-atgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattg 239  Q
     ||| ||||| |||||||||| ||||| ||||||||| ||||||||||||||||||| |||| ||||| ||||||||||||||||||||||| |||||||    
T  34939569 gttgtatgaatatgggttgaattgaataaatggataactgttgctaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattgatgataattg 34939470  T
Q  240 tatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgc 301  Q
    ||||||||||||| |||| |||||||  | ||||| ||||||  ||||||||||||||||||    
T  34939469 tatgattgttggtgaaatcacatgttcaattatgtaaaaatgtgaagttatgaaaattgtgc 34939408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 169 - 316
Target Start/End: Complemental strand, 23507228 - 23507081
Alignment:
Q  169 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 268  Q
    ||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  |    
T  23507228 atggataattgttgctaaattcgtgctccatttgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaa 23507129  T
Q  269 atatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||||| ||||||| ||||| ||||||||||||  ||| |||||||||    
T  23507128 atatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattt 23507081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 170 - 300
Target Start/End: Original strand, 18531068 - 18531198
Alignment:
Q  170 tggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaa 269  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  |     
T  18531068 tggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaat 18531167  T
Q  270 tatgtgaaaatgaaaagttatgaaaattgtg 300  Q
    ||||| ||||||  ||||| |||||||||||    
T  18531168 tatgtaaaaatgtgaagttgtgaaaattgtg 18531198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 38 - 316
Target Start/End: Original strand, 27182426 - 27182694
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 137  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| | |||||||||||||||||||||| |||||||||||  |||||  ||| || ||||||    
T  27182426 agcttaggagctaaattgaagcctaagttgggattaatctttacctaaggtaagggggttagtcttcatcataatcatcatcatt--ttgtaaattttca 27182523  T
Q  138 tgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataat 237  Q
        ||| ||||| |   ||    || || ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||| |||||    
T  27182524 aatgttgtatgaatt---tt----tgcat-aatggataattgttgctaaattcatgctccaactgtgatgatatgtttgtatgcatgaactgatgataat 27182615  T
Q  238 tgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    ||||||||||||| | ||||||||||||  |||| |   |||||| ||||| ||||||||||||  ||| |||||||||    
T  27182616 tgtatgattgttgatgaaattacatgttcaaataggaacaaatgataagttgtgaaaattgtgctcaattggtgaattt 27182694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 170 - 316
Target Start/End: Original strand, 22053834 - 22053980
Alignment:
Q  170 tggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaa 269  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||| |||||||||||||||| ||||||||||||  |     
T  22053834 tggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgtatgaattgatgatagttgtatgattgttggtgaaattacatgttcaat 22053933  T
Q  270 tatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    ||||| ||||||  ||||| ||||||||||||  ||| |||||||||    
T  22053934 tatgtaaaaatgtgaagttgtgaaaattgtgctcaattggtgaattt 22053980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 17 - 266
Target Start/End: Complemental strand, 32951111 - 32950861
Alignment:
Q  17 cttgaagaatccaattggga-aagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||| |||||||  |||||||||||||||||||||| ||| |||||   ||||| | || ||||||||||||||||||||| ||||||| |||    
T  32951111 cttgaagaatcaaattggggtaagcttaggagctaaattgaagtctaagtttgaattaatcattatttaaggtaagggggttagtcttcatcataaccat 32951012  T
Q  116 gttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgttt 215  Q
    ||||| |  |||||| || || |   ||| ||||||||||||||   |||||||| ||||||||||| ||||||||||||| |||| ||||| ||| ||     
T  32951011 gttcaattattgcaacttctcctttgttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctctaactgtgatgttattttc 32950912  T
Q  216 gtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 266  Q
    || || |||| ||||| |||||||||||||||| | | |||||||||||||    
T  32950911 gtgtgtatgatttgatgataattgtatgattgtggttgaaattacatgttt 32950861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 29188284 - 29188419
Alignment:
Q  181 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 280  Q
    ||||| ||||||||||  ||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||| |||||    
T  29188284 tgctagattcgtgctcttactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaat 29188383  T
Q  281 gaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    || ||||| ||||||| ||||  ||| |||||||||    
T  29188384 gataagttgtgaaaatggtgctcaattggtgaattt 29188419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 1219363 - 1219493
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||    ||||||  |||||||| ||||||||||||||||||||  ||||||    
T  1219363 gagaagaacttgaagaatccaattgggtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagtgattatca 1219462  T
Q  109 taatcatgttcattctttgcaatttttcatg 139  Q
    ||||||||| || | |||||| ||| |||||    
T  1219463 taatcatgtacaatttttgcattttctcatg 1219493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 185 - 316
Target Start/End: Complemental strand, 27010089 - 27009958
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaa 284  Q
    ||||||||||||   || ||||| ||||||||||||||||||||||| || ||||||||| ||||||| ||||||||||||| ||||||| ||||||| |    
T  27010089 aaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgatgattgtatgagtgttggtgaaattacatgtttaaatatgtaaaaatgata 27009990  T
Q  285 agttatgaaaattgtgcaaaatgggtgaattt 316  Q
    ||||||||| ||||| |  ||| |||||||||    
T  27009989 agttatgaatattgtactcaattggtgaattt 27009958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 23328970 - 23328865
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||    ||||||  |||||||| ||||||||||||||||||||  ||||||    
T  23328970 gagaagaacttgaagaatccaattgggtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatca 23328871  T
Q  109 taatca 114  Q
    ||||||    
T  23328870 taatca 23328865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 24616574 - 24616469
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||    ||||||  |||||||| ||||||||||||||||||||  ||||||    
T  24616574 gagaagaacttgaagaatccaattgggtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatca 24616475  T
Q  109 taatca 114  Q
    ||||||    
T  24616474 taatca 24616469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 24712950 - 24712845
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||    ||||||  |||||||| ||||||||||||||||||||  ||||||    
T  24712950 gagaagaacttgaagaatccaattgggtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatca 24712851  T
Q  109 taatca 114  Q
    ||||||    
T  24712850 taatca 24712845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 24745968 - 24745863
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||    ||||||  |||||||| ||||||||||||||||||||  ||||||    
T  24745968 gagaagaacttgaagaatccaattgggtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatca 24745869  T
Q  109 taatca 114  Q
    ||||||    
T  24745868 taatca 24745863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 22366481 - 22366616
Alignment:
Q  181 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 280  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||||  || |||||| ||||||||| ||||||||||||   |||||  |||||    
T  22366481 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaat 22366580  T
Q  281 gaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    || |||||||||| ||||||| |||| |||||||||    
T  22366581 gataagttatgaagattgtgctaaattggtgaattt 22366616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 184 - 316
Target Start/End: Original strand, 18777995 - 18778127
Alignment:
Q  184 taaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaa 283  Q
    |||||||||||||   || ||||| |||||||||||||||||||||||  || |||||| ||||||||| ||||||||||||   |||||  |||||||     
T  18777995 taaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaatgat 18778094  T
Q  284 aagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||||||||| ||||||| |||| |||||||||    
T  18778095 aagttatgaagattgtgctaaattggtgaattt 18778127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 184 - 316
Target Start/End: Original strand, 43443398 - 43443530
Alignment:
Q  184 taaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaa 283  Q
    |||||||||||||   || ||||| |||||||||||||||||||||||  || |||||||||||||||| ||||||||||||   |||||  |||||||     
T  43443398 taaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaatgat 43443497  T
Q  284 aagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||||||||| |||||||  ||| |||||||||    
T  43443498 aagttatgaatattgtgctcaattggtgaattt 43443530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 4199985 - 4200120
Alignment:
Q  181 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 280  Q
    ||||||||||||||||    | ||||| |||||||||||||||||||||||  || |||||||||||||||| ||||||||||||   |||||  |||||    
T  4199985 tgctaaattcgtgctcttgttgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 4200084  T
Q  281 gaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    || |||||||||| ||| ||| |||| |||||||||    
T  4200085 gataagttatgaatattatgctaaattggtgaattt 4200120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 181 - 316
Target Start/End: Complemental strand, 19500151 - 19500016
Alignment:
Q  181 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 280  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||||  || |||||| ||||||||| ||||||||||||   |||||  |||||    
T  19500151 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaat 19500052  T
Q  281 gaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    || |||||||||| ||||||| |||  |||||||||    
T  19500051 gataagttatgaagattgtgctaaagtggtgaattt 19500016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 181 - 316
Target Start/End: Complemental strand, 25426880 - 25426745
Alignment:
Q  181 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 280  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||||  || |||||| ||||||||| ||||||||||||   |||||  |||||    
T  25426880 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaat 25426781  T
Q  281 gaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    || |||||||||| ||||||| |||  |||||||||    
T  25426780 gataagttatgaagattgtgctaaagtggtgaattt 25426745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 23981360 - 23981437
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||||||||||||| ||||||  |||||||||||| ||||||||||||||||||| |||| ||||||    
T  23981360 agcttaggagctaaattgaagcctaagtttggattaatcttcatcttaggtaagggggttagtcttcatcaaaatcat 23981437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 181 - 316
Target Start/End: Complemental strand, 12626 - 12491
Alignment:
Q  181 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 280  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||||  || |||||| ||||||||| ||||||||||||   |||||  ||| |    
T  12626 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaagt 12527  T
Q  281 gaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    || |||||||||| ||||||| |||  |||||||||    
T  12526 gataagttatgaagattgtgctaaagtggtgaattt 12491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 21073595 - 21073730
Alignment:
Q  181 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 280  Q
    ||||||||||||||||   || ||||| ||||||||||||||||||| |||  || |||||| ||||||||| ||||||||||||   |||||  |||||    
T  21073595 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaatggatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaat 21073694  T
Q  281 gaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    || |||||||||| ||||||| |||  |||||||||    
T  21073695 gataagttatgaagattgtgctaaagtggtgaattt 21073730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 21651095 - 21651018
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||||||||| ||| ||| ||  ||||||||||||||||||||||||||| | ||||||||||||||    
T  21651095 agcttaggagctaaattgaagtctaagttgggattaatcttcatctaaggtaagggggttaatatttatcataatcat 21651018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 113
Target Start/End: Complemental strand, 2032210 - 2032135
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatc 113  Q
    ||||||||||||||||||||||||| ||||||  ||||| | ||||||||||||||||||||| || |||||||||    
T  2032210 agcttaggagctaaattgaagcctaagtttgggttaatccttatctaaggtaagggggttagttttcatcataatc 2032135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 38 - 151
Target Start/End: Original strand, 108683 - 108797
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat-gttcattctttgcaatttttc 136  Q
    |||||||||| |||| ||||||||| ||| ||  ||||||| |||||||||||||||||||||||| |||||||||||  ||  || |||||||||||||    
T  108683 agcttaggaggtaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtcttcatcataatcataattgtttgtttgcaatttttc 108782  T
Q  137 atgatttggatgaaa 151  Q
     || |||| ||||||    
T  108783 ttggtttgtatgaaa 108797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 266
Target Start/End: Complemental strand, 23514968 - 23514728
Alignment:
Q  15 aacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatca 114  Q
    ||||||| ||||| | | ||| ||||||||||||| |||||||||    ||||||  |||||||| ||||||||||||||||||||  | ||||||||||    
T  23514968 aacttgaggaatcaattggggtaagcttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttatcatcataatca 23514869  T
Q  115 tgttcattctttgcaatttttcatgatttggatg-aaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgt 213  Q
    |||||| | |||||| ||| |||||  ||| ||| ||||||||||          ||| | ||||||||||||||||||||||   || ||||| ||| |    
T  23514868 tgttcaatttttgcattttctcatg--ttgtatgaaaatgggttg----------atgaacaattgttgctaaattcgtgctcttgctgtgatgctattt 23514781  T
Q  214 ttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 266  Q
    |  | ||||||||||||| || || ||||| |||| ||| |||||||||||||    
T  23514780 tcttgtgcatgaattgatgattatggtatgtttgtgggtgaaattacatgttt 23514728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 23507348 - 23507270
Alignment:
Q  37 aagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||| |||| |||||| || ||| |   ||||||| ||||||||||||||||||||||||||||||||||||    
T  23507348 aagcttaggagttaaagtgaagcataagttggaattaatctttatctaaggtaagggggttagtctttatcataatcat 23507270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 139
Target Start/End: Original strand, 35790969 - 35791071
Alignment:
Q  37 aagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttc 136  Q
    ||||||||||||| |||||||||    ||||||  |||||||| ||||||||||||||||||||  ||||||||||||||| || | |||||| ||| ||    
T  35790969 aagcttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctc 35791068  T
Q  137 atg 139  Q
    |||    
T  35791069 atg 35791071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 21205325 - 21205249
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||||||||||||| ||| |   ||||||||||||||| ||| ||| ||||||||||||||||||||    
T  21205325 agcttaggagctaaattgaagcctaagttggaattaatcttcatctaagataa-gggattagtctttatcataatcat 21205249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 25005210 - 25005137
Alignment:
Q  42 taggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||| ||||||||| ||||||  ||||| | |||||| ||||||||||||||||| |||||||||||    
T  25005210 taggagctaaagtgaagcctaagtttggattaatcattatctaaagtaagggggttagtcttcatcataatcat 25005137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 139
Target Start/End: Complemental strand, 7425706 - 7425607
Alignment:
Q  40 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||| |||||||||    ||||||  |||||||| ||||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  7425706 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 7425607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 7529299 - 7529228
Alignment:
Q  44 ggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||| ||||||||| ||||||  ||||| | ||||||||||||||||||||||||  ||||||||||    
T  7529299 ggagctaaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcttcataatcat 7529228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 115
Target Start/End: Complemental strand, 16106010 - 16105967
Alignment:
Q  72 taatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  16106010 taatcttcttctaaggtaagggggttagtctttatcataatcat 16105967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 196
Target Start/End: Complemental strand, 17909897 - 17909742
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatg--ttcattctttgcaatttttcat 138  Q
    ||||||| |||| ||||||||| ||||||  ||||| | | ||||||||||||||||||| ||  |||||||||||  |   || || |||||||| | |    
T  17909897 ttaggagttaaagtgaagcctaagtttggattaatcataacctaaggtaagggggttagtgttcttcataatcatgattgttttgttagcaattttcctt 17909798  T
Q  139 gatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 196  Q
    |  ||| ||||||||||||||   |||||||| ||||||||||| |||||||||||||    
T  17909797 g--ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 17909742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 113
Target Start/End: Original strand, 18530943 - 18531018
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatc 113  Q
    ||||||||||||||| ||||||||| |||  |  ||||| | |||||||||||||||||||||||| |||||||||    
T  18530943 agcttaggagctaaagtgaagcctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataatc 18531018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 11343081 - 11343008
Alignment:
Q  42 taggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||||||| |||||||||  ||||| ||  |||||||| || ||||||||||||||||| ||||||||||||||    
T  11343081 taggagctgaattgaagcagaggttagggttaatcttcttcaaaggtaagggggttagtttttatcataatcat 11343008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 22053708 - 22053785
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||| ||||| ||| |||  |  ||||| | |||||||||||||||||||||||| |||||||||||    
T  22053708 agcttaggagctaaagtgaagtctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataatcat 22053785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 36989688 - 36989743
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||||||| |||||    
T  36989688 aaggtaagggggttagttattatcataatcatgtacaatctttgcaatttctcatg 36989743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 265
Target Start/End: Original strand, 21310709 - 21310790
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattgtatgattgttggttaaattacatgtt 265  Q
    |||||||||||| |||| |||||||||||||| ||||||| ||||| | ||||||| ||  |||||||| ||||| ||||||    
T  21310709 aaattcgtgctctaactatgatgatatgtttgaatgcatgaaattggtgataattgaattgttgttggtgaaattgcatgtt 21310790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 27010221 - 27010144
Alignment:
Q  40 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgt 117  Q
    |||||||||| |||||||||    ||||||  |||||||| ||||||||||||||||||||  |||||| ||||||||    
T  27010221 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcacaatcatgt 27010144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 265
Target Start/End: Complemental strand, 29918212 - 29918131
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattgtatgattgttggttaaattacatgtt 265  Q
    ||||||||||||||| | |||||||||||||| || |||| ||||||| ||||||| ||  |||||||| ||||| ||||||    
T  29918212 aaattcgtgctccaattatgatgatatgtttgaatacatgaaattgatgataattgaattgttgttggtgaaattgcatgtt 29918131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 9730236 - 9730347
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat-gttcattctttgcaatttttcatg 139  Q
    |||||||||||| ||||||| | |||||   | ||| | | |||||||||||||||||||||| |||||||||||  ||  || ||||||||||||| ||    
T  9730236 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttagtcttcatcataatcataattgtttgtttgcaatttttcttg 9730335  T
Q  140 atttggatgaaa 151  Q
     |||| ||||||    
T  9730336 gtttgtatgaaa 9730347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 266
Target Start/End: Original strand, 10777968 - 10778059
Alignment:
Q  175 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 266  Q
    ||||||||||||||||||||||   || ||||| ||| ||  | ||||||||||||| || || ||||| |||| ||| |||||||||||||    
T  10777968 aattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattgatgattatggtatgtttgtgggtgaaattacatgttt 10778059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 11211983 - 11212038
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  |||||||||||||||||| | |||||| ||| |||||    
T  11211983 aaggtaagggggttagttattatcataatcatgttcaatttttgcattttctcatg 11212038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 21932299 - 21932354
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  21932299 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 21932354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 21938469 - 21938524
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  21938469 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 21938524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Complemental strand, 35582374 - 35582319
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  35582374 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 35582319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 265
Target Start/End: Complemental strand, 19862456 - 19862375
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa-ttgataataattgtatgattgttggttaaattacatgtt 265  Q
    |||||||||||| || | |||||||||||||| ||||||||| ||| | ||||||| ||  |||||||| ||||| ||||||    
T  19862456 aaattcgtgctctaattatgatgatatgtttgaatgcatgaagttgttgataattgaattgttgttggtgaaatttcatgtt 19862375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 23981516 - 23981557
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa 226  Q
    |||||||||||| || | ||||||||||||||||||||||||    
T  23981516 aaattcgtgctctaattatgatgatatgtttgtatgcatgaa 23981557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 295; Significance: 1e-165; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 9 - 319
Target Start/End: Original strand, 16327766 - 16328076
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  16327766 gagaagaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggcctaatcttcatataaggtaagggggttagtctttatca 16327865  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16327866 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 16327965  T
Q  209 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16327966 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 16328065  T
Q  309 gtgaatttgac 319  Q
     ||||||||||    
T  16328066 atgaatttgac 16328076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 9 - 319
Target Start/End: Complemental strand, 10488985 - 10488675
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||     
T  10488985 gagaagaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaaggtggttggtctttatct 10488886  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10488885 taatcatgttcattctttgcaatttttcatgatttggatgaaatgagttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 10488786  T
Q  209 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10488785 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 10488686  T
Q  309 gtgaatttgac 319  Q
     ||||||||||    
T  10488685 atgaatttgac 10488675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 9 - 319
Target Start/End: Complemental strand, 26680623 - 26680313
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26680623 gagaagaacttgaagaatccaattgggtaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 26680524  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26680523 taatcatgttcattctttgcaatttttcatgatttgtatggaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 26680424  T
Q  209 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |    
T  26680423 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaaatatgtaaaaatgaaaagttatgaaaattgtgcaaaatag 26680324  T
Q  309 gtgaatttgac 319  Q
     ||||||||||    
T  26680323 atgaatttgac 26680313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 14 - 301
Target Start/End: Original strand, 13048066 - 13048353
Alignment:
Q  14 gaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatc 113  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||    
T  13048066 gaacttgaagaatccaattgggtaagcttaggagttaaattgaagcctaggtttggtctaatcttcatctaagttaagggggttagtctttatcaccatc 13048165  T
Q  114 atgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgt 213  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||    
T  13048166 atgttcattctttgcaatttttcatgatttgtatgaaatgggttgaaatgaatgaatggataattgttgctaaattcatgctccaacttcaatgatatgt 13048265  T
Q  214 ttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgc 301  Q
    |||||||||||| ||||| || ||||||||||||||||| ||||||||||||| ||||||| |||| || |||||||||| |||||||    
T  13048266 ttgtatgcatgatttgatgatgattgtatgattgttggtgaaattacatgtttaaatatgtaaaaaggataagttatgaatattgtgc 13048353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 9 - 144
Target Start/End: Original strand, 16608939 - 16609074
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16608939 gagaagaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 16609038  T
Q  109 taatcatgttcattctttgcaatttttcatgatttg 144  Q
    ||||||||||||||||||||||||||||||||||||    
T  16609039 taatcatgttcattctttgcaatttttcatgatttg 16609074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 38 - 316
Target Start/End: Complemental strand, 13246814 - 13246546
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 137  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||  |||||  ||| || ||||||    
T  13246814 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcatcatt--ttgtaaattttca 13246717  T
Q  138 tgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataat 237  Q
        ||| ||||| |   ||    || || ||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||| || |||||    
T  13246716 aatgttgtatgaatt---tt----tgcat-aatggataattgttgttaaattcgtgctacaactgtgatgatatgtttgtatgcatgaattaatgataat 13246625  T
Q  238 tgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    ||||||||||||||| ||||||||||||  |||| |   |||||| ||||| ||||||||||||  ||| |||||||||    
T  13246624 tgtatgattgttggtgaaattacatgttcaaataggaacaaatgataagttgtgaaaattgtgctcaattggtgaattt 13246546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 169 - 316
Target Start/End: Complemental strand, 122152 - 122005
Alignment:
Q  169 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 268  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||  |    
T  122152 atggataattgttgctaaatttgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttcaa 122053  T
Q  269 atatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||||| ||||||| ||||| ||||||||||||  ||| |||||||||    
T  122052 atatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattt 122005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 170 - 316
Target Start/End: Original strand, 15675090 - 15675236
Alignment:
Q  170 tggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaa 269  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  |     
T  15675090 tggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaat 15675189  T
Q  270 tatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    ||||| ||||||  ||||| ||||||||||||  ||| |||||||||    
T  15675190 tatgtaaaaatgtgaagttgtgaaaattgtgctcaattggtgaattt 15675236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 170 - 316
Target Start/End: Original strand, 10104251 - 10104397
Alignment:
Q  170 tggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaa 269  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  |     
T  10104251 tggataattgttgctaaatccgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaat 10104350  T
Q  270 tatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    ||||| ||||||  ||||| ||||||||||||  ||| |||||||||    
T  10104351 tatgtaaaaatgtgaagttgtgaaaattgtgctcaattggtgaattt 10104397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 168 - 316
Target Start/End: Original strand, 54118243 - 54118391
Alignment:
Q  168 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttg 267  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||      
T  54118243 aatggataattgttgctaaattcgtgctccaattgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttca 54118342  T
Q  268 aatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||| |   || ||| ||||| ||||||||||||  ||| |||||||||    
T  54118343 aataggaacaattgataagttgtgaaaattgtgctcaattggtgaattt 54118391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 139
Target Start/End: Complemental strand, 20001136 - 20001006
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||    ||||||  |||||||| ||||||||||||||||||||  ||||||    
T  20001136 gagaagaacttgaagaatccaattgggtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatca 20001037  T
Q  109 taatcatgttcattctttgcaatttttcatg 139  Q
    ||||||||| || | |||||| ||| |||||    
T  20001036 taatcatgtacaatttttgcattttctcatg 20001006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 196 - 316
Target Start/End: Complemental strand, 31115865 - 31115745
Alignment:
Q  196 ccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaa 295  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  | ||||| ||||||  ||||| ||||||    
T  31115865 ccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttccattatgtaaaaatgtgaagttgtgaaaa 31115766  T
Q  296 ttgtgcaaaatgggtgaattt 316  Q
    || |||  ||| |||||||||    
T  31115765 ttatgctcaattggtgaattt 31115745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 185 - 316
Target Start/End: Complemental strand, 10644467 - 10644336
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaa 284  Q
    ||||||||||||   || ||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||  ||||||| ||||||  |    
T  10644467 aaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttagtgaaattacatgttcaaatatgtaaaaatgtta 10644368  T
Q  285 agttatgaaaattgtgcaaaatgggtgaattt 316  Q
    ||||||||  ||||||| |||| |||||||||    
T  10644367 agttatgagtattgtgctaaattggtgaattt 10644336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 26339432 - 26339327
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||    ||||||  |||||||| ||||||||||||||||||||  ||||||    
T  26339432 gagaagaacttgaagaatccaattgggtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatca 26339333  T
Q  109 taatca 114  Q
    ||||||    
T  26339332 taatca 26339327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 33240962 - 33240890
Alignment:
Q  170 tggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtat 242  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||    
T  33240962 tggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgatgattgtat 33240890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 181 - 316
Target Start/End: Complemental strand, 47357906 - 47357771
Alignment:
Q  181 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 280  Q
    ||||||||||||||||   || ||||| |||||||||||||||| ||||||  || |||||| ||||||||| ||||||||||||   |||||  |||||    
T  47357906 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatggattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaat 47357807  T
Q  281 gaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    || |||||||||| ||||||| |||| |||||||||    
T  47357806 gataagttatgaagattgtgctaaattggtgaattt 47357771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 15135862 - 15135939
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||| ||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  15135862 agcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 15135939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 15272166 - 15272243
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||| ||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  15272166 agcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 15272243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 55376440 - 55376525
Alignment:
Q  29 aattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatca 114  Q
    |||||||  ||||||||||||||||||||||||| ||||||  | ||| | |||||||||||||||||||||||| ||||||||||    
T  55376440 aattgggtgagcttaggagctaaattgaagcctaagtttgggttgatccttatctaaggtaagggggttagtcttcatcataatca 55376525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 122271 - 122194
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||||| |||||||||||||| ||| ||| ||  ||||||| ||||||||||||||| ||||||||||||||||||||    
T  122271 agcttaagagctaaattgaagtctaagttgggattaatctttatctaaggtaaggggattagtctttatcataatcat 122194  T

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Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 185 - 265
Target Start/End: Original strand, 40885570 - 40885650
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtt 265  Q
    |||||||| |||||||| || || ||||||||||||||||||||| | ||||||| ||| |||||||| ||||||||||||    
T  40885570 aaattcgtactccaactgtggtgctatgtttgtatgcatgaattggtgataattgaatgtttgttggtgaaattacatgtt 40885650  T

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Target: chr4; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 14952160 - 14952085
Alignment:
Q  40 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||| |||||||||    ||||||  |||||||| |||||||||||||||||||||||||||||||||||    
T  14952160 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagtctttatcataatcat 14952085  T

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Target: chr4; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 41 - 116
Target Start/End: Original strand, 32460561 - 32460636
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatg 116  Q
    |||||||||||| ||||||||| ||||||  ||||| | ||||||||||||||||||||||||  |||||||||||    
T  32460561 ttaggagctaaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcttcataatcatg 32460636  T

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Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 137
Target Start/End: Original strand, 15674964 - 15675065
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcat--tctttgcaattttt 135  Q
    ||||||||||||||| ||||||||| |||  |  ||||| | |||||||||||||||||||||||| |||||||||||  ||||  | ||||||||||||    
T  15674964 agcttaggagctaaagtgaagcctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataatcatcatcatcatttttgcaattttt 15675063  T
Q  136 ca 137  Q
    ||    
T  15675064 ca 15675065  T

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Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 82 - 196
Target Start/End: Complemental strand, 9795566 - 9795453
Alignment:
Q  82 ctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgtt 181  Q
    |||||||||||||||||||  | |||||||||||||||| | ||| || ||| |||||  ||| ||||||||||||||   |||||||| ||||||||||    
T  9795566 ctaaggtaagggggttagttatcatcataatcatgttcaattttttcattttctcatg--ttgtatgaaatgggttgattggaatgaattgataattgtt 9795469  T
Q  182 gct-aaattcgtgctc 196  Q
    | | ||||||||||||    
T  9795468 gttaaaattcgtgctc 9795453  T

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Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 139
Target Start/End: Original strand, 15287119 - 15287218
Alignment:
Q  40 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||| |||||||||    ||||||  |||||||| ||||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  15287119 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 15287218  T

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Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 139
Target Start/End: Original strand, 15294228 - 15294327
Alignment:
Q  40 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||| |||||||||    ||||||  |||||||| ||||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  15294228 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 15294327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 17145563 - 17145630
Alignment:
Q  72 taatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||| ||||||||||||||||||||  |||||||||||||||||| | |||||| ||| |||||    
T  17145563 taatcttcttctaaggtaagggggttagttattatcataatcatgttcaatttttgcattttctcatg 17145630  T

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Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 41 - 139
Target Start/End: Original strand, 7131940 - 7132038
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    ||||||||| |||||||||    ||||||  |||||||| ||||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  7131940 ttaggagctgaattgaagcaagagtttggattaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 7132038  T

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Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 40885418 - 40885492
Alignment:
Q  42 taggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatg 116  Q
    ||||||||||| ||||||||| ||||||  ||||| | ||||||||||||||||||||  || ||||||||||||    
T  40885418 taggagctaaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagaattcatcataatcatg 40885492  T

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Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 10104125 - 10104202
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||| | ||||||| |||  |  ||||| | |||||||||||||||||||||||| |||||||||||    
T  10104125 agcttaggagctaaagtaaagcctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataatcat 10104202  T

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Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 8045346 - 8045235
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat-gttcattctttgcaatttttcatg 139  Q
    |||||||||||| ||||| ||| |||||   ||||| | | |||||||||||||||||||||| |||||||||||  ||  || ||||||||||||| ||    
T  8045346 ttaggagctaaagtgaagtctaagtttgaattaatcataacctaaggtaagggggttagtcttcatcataatcataattgtttgtttgcaatttttcttg 8045247  T
Q  140 atttggatgaaa 151  Q
     |||| ||||||    
T  8045246 gtttgtatgaaa 8045235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 196
Target Start/End: Complemental strand, 14996519 - 14996364
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatg--ttcattctttgcaatttttcat 138  Q
    ||||||||| |||||||||    ||||||  |||||||| | ||||||||||||||||||  ||||||||||||||  |   || ||||||||||| | |    
T  14996519 ttaggagctgaattgaagcaagagtttgggttaatcttcttttaaggtaagggggttagttattatcataatcatgattgttttgtttgcaattttcctt 14996420  T
Q  139 gatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 196  Q
    |  ||| ||||||||| ||||   |||||||| ||||||||||| ||||||| |||||    
T  14996419 g--ttgtatgaaatggattgattggaatgaattgataattgttgttaaattcctgctc 14996364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 196
Target Start/End: Original strand, 19697236 - 19697391
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattct--ttgcaatttttcat 138  Q
    ||||||| |||| ||||||||| || ||   ||||| | | ||||||||||||||||||| ||  ||||||||||| |  || |  |||||||||| | |    
T  19697236 ttaggaggtaaagtgaagcctaagtgtgaattaatcataacctaaggtaagggggttagtgttcttcataatcatgattgttttgtttgcaattttcctt 19697335  T
Q  139 gatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 196  Q
    |  ||| ||||||||||||||   |||||||| ||||||||||| |||||||||||||    
T  19697336 g--ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 19697391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 196
Target Start/End: Original strand, 19707821 - 19707976
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattct--ttgcaatttttcat 138  Q
    ||||||| |||| ||||||||| || ||   ||||| | | ||||||||||||||||||| ||  ||||||||||| |  || |  |||||||||| | |    
T  19707821 ttaggaggtaaagtgaagcctaagtgtgaattaatcataacctaaggtaagggggttagtgttcttcataatcatgattgttttgtttgcaattttcctt 19707920  T
Q  139 gatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 196  Q
    |  ||| ||||||||||||||   |||||||| ||||||||||| |||||||||||||    
T  19707921 g--ttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 19707976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 115
Target Start/End: Original strand, 14500074 - 14500144
Alignment:
Q  45 gagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||||||| |||||| || ||||||  ||||| | |||||||||||||||||||| ||| |||||||||||    
T  14500074 gagctaaagtgaagcttaagtttggattaatcattatctaaggtaagggggttaggcttcatcataatcat 14500144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 22351938 - 22352012
Alignment:
Q  40 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatca 114  Q
    |||||||||| |||||||||    ||||||  |||||||| ||||||||||||||||||||  ||||||||||||    
T  22351938 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatca 22352012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 139
Target Start/End: Complemental strand, 22738650 - 22738552
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||| ||||||||| |||  |  ||| | |||||||||||||||||||| ||||| ||||||||||  |||| | |||||| ||| |||||    
T  22738650 ttaggagctaaagtgaagcctaagttaagattaaacatcatctaaggtaagggggtttgtcttcatcataatcaatttcaatttttgcattttctcatg 22738552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 31132702 - 31132628
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataat 112  Q
    ||||||||||||||| || |||||| |||  |  ||||| | |||||||||||||||||||||||| ||||||||    
T  31132702 agcttaggagctaaagtggagcctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataat 31132628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 33241088 - 33240987
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcat--tctttgcaattttt 135  Q
    |||||||||| ||||  |||||||| |||  |  ||||| | |||||||||||||||||||||||| |||||||||||  ||||  | ||||||||||||    
T  33241088 agcttaggagttaaagcgaagcctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataatcatcatcatcatttttgcaattttt 33240989  T
Q  136 ca 137  Q
    ||    
T  33240988 ca 33240987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 168 - 301
Target Start/End: Complemental strand, 7850264 - 7850131
Alignment:
Q  168 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttg 267  Q
    |||| ||||||| || ||||||||||||||||    |||| |||||||| ||| ||| |||||| | || ||| |||||||||||  ||||  ||||       
T  7850264 aatgcataattgctgttaaattcgtgctccaatggagatgttatgtttgaatgaatgtattgatgaaaactgtgtgattgttggtggaattgtatgtcca 7850165  T
Q  268 aatatgtgaaaatgaaaagttatgaaaattgtgc 301  Q
    | ||||||||||||  ||||||||||||||||||    
T  7850164 attatgtgaaaatgtgaagttatgaaaattgtgc 7850131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 80 - 121
Target Start/End: Complemental strand, 7850349 - 7850308
Alignment:
Q  80 atctaaggtaagggggttagtctttatcataatcatgttcat 121  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  7850349 atctaaggtaagggggttagtcttcaccataatcatgttcat 7850308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 47358035 - 47357956
Alignment:
Q  37 aagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgt 117  Q
    ||||||||||||| |||||||||    ||| ||| |||||||| ||||||||||||||||||||  |||||| ||||||||    
T  47358035 aagcttaggagctgaattgaagcaagagttgggt-taatcttcttctaaggtaagggggttagttattatcacaatcatgt 47357956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 266
Target Start/End: Complemental strand, 18169228 - 18169137
Alignment:
Q  175 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 266  Q
    ||||||||||||||||||||||   || ||||| ||| ||  | ||||||||||||| || || ||||| |||| ||| |||||||||||||    
T  18169228 aattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattgatgattatggtatgtttgtgggtgaaattacatgttt 18169137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 170 - 201
Target Start/End: Complemental strand, 31132576 - 31132545
Alignment:
Q  170 tggataattgttgctaaattcgtgctccaact 201  Q
    ||||||||||||||||||||||||||||||||    
T  31132576 tggataattgttgctaaattcgtgctccaact 31132545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 151
Target Start/End: Complemental strand, 16523179 - 16523109
Alignment:
Q  82 ctaaggtaagggggttagtctttatcataatcat-gttcattctttgcaatttttcatgatttggatgaaa 151  Q
    |||||||||||||||||||||| |||||||||||  ||  || ||||||||||||| || |||| ||||||    
T  16523179 ctaaggtaagggggttagtcttcatcataatcataattgtttgtttgcaatttttcttggtttgtatgaaa 16523109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 113
Target Start/End: Complemental strand, 18248568 - 18248527
Alignment:
Q  72 taatcttcatctaaggtaagggggttagtctttatcataatc 113  Q
    ||||| |||||||||||||||||||||||  |||||||||||    
T  18248568 taatcatcatctaaggtaagggggttagttattatcataatc 18248527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 13809511 - 13809551
Alignment:
Q  186 aattcgtgctccaactttgatgatatgtttgtatgcatgaa 226  Q
    |||||||||||||| | |||||||||||||| |||||||||    
T  13809511 aattcgtgctccaattatgatgatatgtttgaatgcatgaa 13809551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 265
Target Start/End: Complemental strand, 15045074 - 15044994
Alignment:
Q  186 aattcgtgctccaactttgatgatatgtttgtatgcatgaa-ttgataataattgtatgattgttggttaaattacatgtt 265  Q
    |||||||||||||| | ||||| |||||||| ||||||||| ||| | ||||||| ||  |||||||| ||||| ||||||    
T  15045074 aattcgtgctccaattatgatgttatgtttgaatgcatgaagttgttgataattgaattgttgttggtgaaatttcatgtt 15044994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 115
Target Start/End: Original strand, 54118168 - 54118200
Alignment:
Q  83 taaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||||||||| |||||||||||    
T  54118168 taaggtaagggggttagtcttcatcataatcat 54118200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 295; Significance: 1e-165; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 9 - 319
Target Start/End: Original strand, 2449079 - 2449388
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2449079 gagaagaacttgaagaatcca-ttgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 2449177  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2449178 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 2449277  T
Q  209 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2449278 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 2449377  T
Q  309 gtgaatttgac 319  Q
     ||||||||||    
T  2449378 atgaatttgac 2449388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 9 - 316
Target Start/End: Complemental strand, 45861228 - 45860922
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  45861228 gagaagaacttgaagaatccaattgggtgagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttacca 45861129  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    ||||||| |||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  45861128 taatcatattcattctttgcaatttttcatgaattgtatgaaatgggttgaaaggaatgaatggataattgttgctaaattcgtgctccaactttgatga 45861029  T
Q  209 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 308  Q
    |||| |||||||||||||||| | || |||||||||||||||||  |||||||||||| |||| || ||||||| |||||||||| |||||||  ||| |    
T  45861028 tatg-ttgtatgcatgaattgttgatgattgtatgattgttggtggaattacatgtttaaataagtaaaaatgataagttatgaatattgtgctcaattg 45860930  T
Q  309 gtgaattt 316  Q
    ||||||||    
T  45860929 gtgaattt 45860922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 9 - 301
Target Start/End: Original strand, 13954730 - 13955021
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  13954730 gagaagaacttgaagaatccaattgggtgagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttacca 13954829  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13954830 taatcatgttcattctttgcaatttttcatgaattgtatgaaatgggttgaaaggaatgaatggataattgttgctaaattcgtgctccaactttgatga 13954929  T
Q  209 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgc 301  Q
    |||| |||||||||||||||| | || |||||||||||||||||  |||||||||||| |||| || |||||||  ||||||||| |||||||    
T  13954930 tatg-ttgtatgcatgaattgttgatgattgtatgattgttggtggaattacatgtttaaataagtaaaaatgatcagttatgaatattgtgc 13955021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 38 - 318
Target Start/End: Original strand, 17912353 - 17912631
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 137  Q
    ||||||||||||||||||||||||  | | ||  ||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||    
T  17912353 agcttaggagctaaattgaagcctgaggtgggattaatctttatctaaggtaagggggttagtctttatcataatcatgttcatttattgcaatttt-ca 17912451  T
Q  138 tgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataat 237  Q
    | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  17912452 ttatttgtatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactt-gatgatatgtttgtatgcatgaattgatgataat 17912550  T
Q  238 tgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaatttga 318  Q
    ||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||| | |||||||||    
T  17912551 tgtatgattgttggtgaaattacatgtttaaatatgtaaaaatgaaaagttatgaaaattgtgcaaaattgatgaatttga 17912631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 101 - 316
Target Start/End: Original strand, 13975654 - 13975868
Alignment:
Q  101 ctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaac 200  Q
    ||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13975654 ctttaccataatcatgttcattctttgcaatttttcatgaattgtatgaaatgggttgaaaggaatgaatggataattgttgctaaattcgtgctccaac 13975753  T
Q  201 tttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtg 300  Q
    |||||||||||| |||||||||||||||| | || |||||||||||||||||  |||||||||||| |||| || ||||||| |||||||||| ||||||    
T  13975754 tttgatgatatg-ttgtatgcatgaattgttgatgattgtatgattgttggtggaattacatgtttaaataagtaaaaatgataagttatgaatattgtg 13975852  T
Q  301 caaaatgggtgaattt 316  Q
    |  ||| |||||||||    
T  13975853 ctcaattggtgaattt 13975868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 169 - 319
Target Start/End: Original strand, 16744115 - 16744265
Alignment:
Q  169 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 268  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |    
T  16744115 atggatgattgttgttaaattcgtgctccaactttgatgatatgtttgtatccatgaattgataataagtgtatgattgttggttaaattacatttttaa 16744214  T
Q  269 atatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaatttgac 319  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  16744215 atatgtaaaaatgaaaagttatgaaaattgtgcaaaatggatgaatttgac 16744265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 15 - 316
Target Start/End: Complemental strand, 15615237 - 15614950
Alignment:
Q  15 aacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatca 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15615237 aacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatttaaggtaagggggttagtctttatcataatca 15615138  T
Q  115 tgttcattctttgcaatttttcatgatttggatg-aaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgt 213  Q
    || | ||  |||||| ||| |||||  ||| ||| ||||||||||          ||| | ||||  ||||| ||| ||||||  ||| || || ||| |    
T  15615137 tg-taat--tttgcattttctcatg--ttgtatgaaaatgggttg----------atgaacaattcatgctagatttgtgctcttactgtggtgttatat 15615053  T
Q  214 ttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaa 313  Q
    |||||||||||||||||| ||||||||| |||||||||| ||||||||||||  ||||||| ||||||| ||||| |||| || ||||  ||| ||||||    
T  15615052 ttgtatgcatgaattgatgataattgtaggattgttggtgaaattacatgttcaaatatgtaaaaatgataagttgtgaatatggtgctcaattggtgaa 15614953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 169 - 316
Target Start/End: Original strand, 51158018 - 51158165
Alignment:
Q  169 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 268  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  |    
T  51158018 atggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaa 51158117  T
Q  269 atatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||||| ||||||| ||||| ||||||||||||  ||| |||||||||    
T  51158118 atatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattt 51158165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 37 - 316
Target Start/End: Original strand, 14842441 - 14842708
Alignment:
Q  37 aagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttc 136  Q
    ||||||||||||| |||||||||    ||| ||  |||||||| ||||||||||||||||||||||||||||||||||| ||||  |||||||| || ||    
T  14842441 aagcttaggagctgaattgaagcaagagttagggttaatcttcttctaaggtaagggggttagtctttatcataatcatcttca--ctttgcaaattctc 14842538  T
Q  137 atgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataa 236  Q
    |    ||| ||||| ||        ||| |  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||    
T  14842539 aaatgttgtatgaattg--------tgatt--atggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgaagataa 14842628  T
Q  237 ttgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||||||||||||||| ||||| ||||||  ||| ||| ||||||| ||||||||||||||||||  ||| |||||||||    
T  14842629 ttgtatgattgttggtgaaattgcatgttcaaatgtgtaaaaatgataagttatgaaaattgtgctcaattggtgaattt 14842708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 18 - 266
Target Start/End: Original strand, 11986014 - 11986263
Alignment:
Q  18 ttgaagaatccaattgggaa-agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatg 116  Q
    |||||||||| |||||||   ||||||||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||||| ||||||||||||    
T  11986014 ttgaagaatcaaattggggtgagcttaggagctaaattgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcatg 11986113  T
Q  117 ttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttg 216  Q
    |||| |  |||||| || || |   ||| ||||||||||||||   |||||||| ||||||||||| ||||||||||||| |||| ||||| ||| || |    
T  11986114 ttcaattattgcaacttctcctttgttgtatgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctctaactgtgatgttattttcg 11986213  T
Q  217 tatgcatgaattgataataattgtatgattgttggttaaattacatgttt 266  Q
    | ||||||| || || |||||||||||||||| | | |||||||||||||    
T  11986214 tgtgcatgatttaatgataattgtatgattgtggttgaaattacatgttt 11986263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 168 - 316
Target Start/End: Original strand, 15859023 - 15859171
Alignment:
Q  168 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttg 267  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||      
T  15859023 aatggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttca 15859122  T
Q  268 aatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    ||||||   |||||| ||||| ||||||||||||  ||| |||||||||    
T  15859123 aatatgaacaaatgataagttgtgaaaattgtgctcaattggtgaattt 15859171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 169 - 316
Target Start/End: Original strand, 12030147 - 12030294
Alignment:
Q  169 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 268  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||  |    
T  12030147 atggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttcaa 12030246  T
Q  269 atatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||||| ||| ||| ||||| ||||| ||||||  ||| |||||||||    
T  12030247 atatgtaaaagtgataagttgtgaaagttgtgctcaattggtgaattt 12030294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 38 - 316
Target Start/End: Complemental strand, 13839277 - 13839010
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 137  Q
    ||||||||||||||||||||||||| ||  ||  || ||||||||||||||||||||||||||||| |||||||||||  ||||| | || |||||| ||    
T  13839277 agcttaggagctaaattgaagcctaagtagggattactcttcatctaaggtaagggggttagtcttcatcataatcatcatcattttgtgaaatttt-ca 13839179  T
Q  138 tgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataat 237  Q
        ||| ||||| |         ||| |  ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  13839178 aatgttgtatgaattt--------tgatt--atgaataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataat 13839089  T
Q  238 tgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||||||||| |||| ||||||||||||  |||| |   |||||| ||||| ||||||||||||  ||| |||||||||    
T  13839088 tgtatgattgatggtgaaattacatgttcaaataggaacaaatgataagttgtgaaaattgtgctcaattggtgaattt 13839010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 175 - 316
Target Start/End: Original strand, 15936633 - 15936774
Alignment:
Q  175 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgt 274  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||| |||    
T  15936633 aattgttactaaattcgtgctccaactgtaatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatgtgt 15936732  T
Q  275 gaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
     ||||||| ||||| ||||||||||||  ||| |||||||||    
T  15936733 aaaaatgataagttgtgaaaattgtgctcaattggtgaattt 15936774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 169 - 316
Target Start/End: Complemental strand, 2050073 - 2049926
Alignment:
Q  169 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 268  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||  |    
T  2050073 atggataattgttgctaaattcgtgctccaactgtgacgatatgtttgtatgcctgaattgatgataattgtaagattgttggtgaaattacatgttcaa 2049974  T
Q  269 atatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||||| || |||| || || ||||||||||||  ||| |||||||||    
T  2049973 atatgtaaacatgataacttgtgaaaattgtgctcaattggtgaattt 2049926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 175 - 316
Target Start/End: Original strand, 15938475 - 15938616
Alignment:
Q  175 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgt 274  Q
    ||||||| |||||| |||||||||||| | ||||||||||||||  ||||||||||| |||||||||||||||||||| ||||||||||||  ||| |||    
T  15938475 aattgttactaaatacgtgctccaactgtaatgatatgtttgtaatcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatgtgt 15938574  T
Q  275 gaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
     ||||||| ||||| ||||||||||||  ||| |||||||||    
T  15938575 aaaaatgataagttgtgaaaattgtgctcaattggtgaattt 15938616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 196
Target Start/End: Original strand, 8268575 - 8268763
Alignment:
Q  9 gagatgaacttgaagaa-tccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatc 107  Q
    |||| |||||||||||| |||||||||| |||||||||||||||||||||||    ||||||  |||||||| ||||||||||||||||||||  |||||    
T  8268575 gagaagaacttgaagaaatccaattgggtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatc 8268674  T
Q  108 ataatcatg--ttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 196  Q
    |||||||||  |   || ||||||||||| | || |||  ||||||| ||||||   |||||||| ||||||||||| |||||||||||||    
T  8268675 ataatcatgattgttttgtttgcaattttccttgtttt--atgaaataggttgattggaatgaattgataattgttgttaaattcgtgctc 8268763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 196
Target Start/End: Original strand, 8275675 - 8275863
Alignment:
Q  9 gagatgaacttgaagaa-tccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatc 107  Q
    |||| |||||||||||| |||||||||| |||||||||||||||||||||||    ||||||  |||||||| ||||||||||||||||||||  |||||    
T  8275675 gagaagaacttgaagaaatccaattgggtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatc 8275774  T
Q  108 ataatcatg--ttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 196  Q
    |||||||||  |   || ||||||||||| | || |||  ||||||| ||||||   |||||||| ||||||||||| |||||||||||||    
T  8275775 ataatcatgattgttttgtttgcaattttccttgtttt--atgaaataggttgattggaatgaattgataattgttgttaaattcgtgctc 8275863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 38 - 265
Target Start/End: Complemental strand, 54651841 - 54651625
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 137  Q
    |||||||||||| |||||||||  | ||||||  ||||| |||||||||||||||||||| ||||| |||||||||||||||| | |||||||||| |||    
T  54651841 agcttaggagcttaattgaagcaaaagtttgggttaatcatcatctaaggtaagggggtttgtcttcatcataatcatgttcaatttttgcaatttctca 54651742  T
Q  138 tgatttggatg-aaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataa 236  Q
    ||  ||| ||| ||||||||||          ||| ||||||||||||||||||||||||   || ||||| ||| ||  | ||||||||||||| ||||    
T  54651741 tg--ttgtatgaaaatgggttg----------atgaataattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattgatgataa 54651654  T
Q  237 ttgtatgattgttggttaaattacatgtt 265  Q
    ||||||||||||  || ||||| ||||||    
T  54651653 ttgtatgattgtgagtgaaattgcatgtt 54651625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 38168312 - 38168237
Alignment:
Q  40 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  38168312 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 38168237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 181 - 316
Target Start/End: Complemental strand, 55316471 - 55316336
Alignment:
Q  181 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 280  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||||  || |||||||||||||||| ||||||||||||   |||||  |||||    
T  55316471 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 55316372  T
Q  281 gaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    || |||||||||| |||||||  ||| |||||||||    
T  55316371 gataagttatgaatattgtgctcaattggtgaattt 55316336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 203 - 316
Target Start/End: Complemental strand, 16821369 - 16821256
Alignment:
Q  203 tgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgca 302  Q
    ||||| ||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||  ||||||| ||||||  ||| |||||  |||||||     
T  16821369 tgatgttatgtttgtatgcataaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgttaagctatgagtattgtgct 16821270  T
Q  303 aaatgggtgaattt 316  Q
    |||| |||||||||    
T  16821269 aaattggtgaattt 16821256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 33342279 - 33342204
Alignment:
Q  40 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||||||||||| ||| ||  |||||||||||||||||||| |||||||||||||||||||||||    
T  33342279 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagagggttagtctttatcataatcat 33342204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 181 - 316
Target Start/End: Complemental strand, 41270327 - 41270192
Alignment:
Q  181 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 280  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||||  || ||||||||||||||||  |||||||||||   |||||  |||||    
T  41270327 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtggaattacatgttcatatatgcaaaaat 41270228  T
Q  281 gaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    || |||||||||| |||||||  ||| |||||||||    
T  41270227 gataagttatgaatattgtgctcaattggtgaattt 41270192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 41 - 115
Target Start/End: Complemental strand, 2050189 - 2050115
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||||||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  2050189 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 2050115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 115
Target Start/End: Complemental strand, 23492794 - 23492696
Alignment:
Q  17 cttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||| ||||| | ||||| ||||||||||||| |||||||||    ||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  23492794 cttgaggaatcaatttgggtaagcttaggagctgaattgaagcaagagtttgggttaatcttcatctaaggtaagggggttagtctttatcataatcat 23492696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 53771442 - 53771365
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||| ||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  53771442 agcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 53771365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 19232045 - 19231982
Alignment:
Q  168 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgat 231  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||    
T  19232045 aatggataattgttgctaaattcgtgctccaactgtgatgatatgtttatattcatgaattgat 19231982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 12030028 - 12030105
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| ||||||||||||||||||| || |||||||||||||    
T  12030028 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttaatcattatcataatcat 12030105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 16261854 - 16261777
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||| ||||||||| ||| |   ||||||| ||||||||||||||||||||||||||||||||||||    
T  16261854 agcttaggagctaaagtgaagcctaagttggaattaatctttatctaaggtaagggggttagtctttatcataatcat 16261777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 45 - 115
Target Start/End: Original strand, 19260711 - 19260781
Alignment:
Q  45 gagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||||| ||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  19260711 gagctaaattgaagtctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 19260781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 30153342 - 30153265
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||||||  |||| ||| ||| ||  ||||||||||||||||||||||||||||| ||||||||||||||    
T  30153342 agcttaggagctaaagagaagtctaagttgggattaatcttcatctaaggtaagggggttagtttttatcataatcat 30153265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 115
Target Start/End: Complemental strand, 14285363 - 14285289
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||| |||||| || ||||||  ||||| | |||||||||||||||||||||||| |||||||||||    
T  14285363 ttaggagctaaagtgaagcttaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcat 14285289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 54685159 - 54685233
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||||||||| ||| ||| ||  ||||||||||| |||||||| |||||||||||||| ||||||||    
T  54685159 ttaggagctaaattgaagtctaagttgggattaatcttcatccaaggtaagtgggttagtctttatgataatcat 54685233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 28558567 - 28558494
Alignment:
Q  42 taggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||| ||||||||||||| ||| ||  ||||||| |||||||||||| |||||||| ||||||||||||||    
T  28558567 taggagcaaaattgaagcctaagttgggattaatctttatctaaggtaagagggttagtttttatcataatcat 28558494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 14080756 - 14080701
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattg 239  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||    
T  14080756 aaattcgtgctccaactatgatgatatgtttgtatgcatgaaattgatgataattg 14080701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 37 - 139
Target Start/End: Complemental strand, 5228697 - 5228595
Alignment:
Q  37 aagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttc 136  Q
    ||||||||||||| ||||||| |    ||||||  |||||||| ||||||||||||||||||||  | |||||||||||||||| | |||||| ||| ||    
T  5228697 aagcttaggagctgaattgaaacaagagtttgggttaatcttcttctaaggtaagggggttagttatcatcataatcatgttcaatttttgcattttctc 5228598  T
Q  137 atg 139  Q
    |||    
T  5228597 atg 5228595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 41 - 139
Target Start/End: Complemental strand, 18911374 - 18911276
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    ||||||||| |||||||||    ||||||  |||||||| ||||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  18911374 ttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 18911276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 41 - 115
Target Start/End: Complemental strand, 19947100 - 19947026
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||| |||| ||||||||| ||||||  ||||| | | |||||||||||||||||||||| |||||||||||    
T  19947100 ttaggagttaaagtgaagcctaagtttggattaatcataacctaaggtaagggggttagtcttcatcataatcat 19947026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 115
Target Start/End: Original strand, 51960990 - 51961063
Alignment:
Q  42 taggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||||| |||| ||||| ||| ||||||  ||||| | |||||||||||||||||||||||| |||||||||||    
T  51960990 taggaggtaaagtgaagtctaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcat 51961063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 41 - 196
Target Start/End: Original strand, 11477053 - 11477209
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatg--ttcattctttgcaatttttcat 138  Q
    ||||||| |||| ||||||||| |||||   ||||| | | ||||||||||||||||||||||  |||||||||||  |   || ||||||||||| | |    
T  11477053 ttaggagttaaagtgaagcctaagtttgaattaatcattacctaaggtaagggggttagtcttcttcataatcatgattgttttgtttgcaattttcctt 11477152  T
Q  139 gatttggatgaaatgggttgaaatgaatgaatggataattgttgct-aaattcgtgctc 196  Q
    |  ||| ||||||||||||||   |||||||| ||||||||||| | ||||||||||||    
T  11477153 g--ttgtatgaaatgggttgattggaatgaattgataattgttgttaaaattcgtgctc 11477209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 18896915 - 18896995
Alignment:
Q  37 aagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgt 117  Q
    ||||||||||||| |||||||||    ||||||  |||||||| || |||||||||||||||||  |||||||||||||||    
T  18896915 aagcttaggagctgaattgaagcaagagtttgggttaatcttcttccaaggtaagggggttagttattatcataatcatgt 18896995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 266
Target Start/End: Original strand, 12264668 - 12264881
Alignment:
Q  42 taggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgat 141  Q
    |||||||| |||||||||  ||||| ||  ||||| || || |||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||      
T  12264668 taggagctgaattgaagcaaaggttgggattaatcatcttcaaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg-- 12264765  T
Q  142 ttggatg-aaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgt 240  Q
    ||| ||| ||||||||||          ||| | ||||||||||||||||||||||   || ||||| ||| ||  | ||||||||||||| || || ||    
T  12264766 ttgtatgaaaatgggttg----------atgaacaattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattgatgattatggt 12264855  T
Q  241 atgattgttggttaaattacatgttt 266  Q
    ||| |||| ||| |||||||||||||    
T  12264856 atgtttgtgggtgaaattacatgttt 12264881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 19260823 - 19260869
Alignment:
Q  169 atggataattgttgctaaattcgtgctccaactttgatgatatgttt 215  Q
    |||||||||||||||||||||||||||| || | |||||||||||||    
T  19260823 atggataattgttgctaaattcgtgctctaattatgatgatatgttt 19260869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 115
Target Start/End: Original strand, 16933868 - 16933901
Alignment:
Q  82 ctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||||||||||||||||||||||    
T  16933868 ctaaggtaagggggttagtctttatcataatcat 16933901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 84 - 266
Target Start/End: Complemental strand, 49232774 - 49232603
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaa-tgggttgaaatgaatgaatggataattgttg 182  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||  ||| |||||| ||||||||          || | ||||||||    
T  49232774 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg--ttgtatgaaaatgggttga----------tgaacaattgttg 49232687  T
Q  183 ctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 266  Q
    ||||||||||||||   || ||||| ||| ||  | ||||||||||||| || || ||||| |||| ||| |||||||||||||    
T  49232686 ctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattgatgattatggtatgtttgtgggtgaaattacatgttt 49232603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 115
Target Start/End: Original strand, 17955884 - 17955916
Alignment:
Q  83 taaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||||||||||||||||||||||||    
T  17955884 taaggtaagggggttagtctttatcataatcat 17955916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 266
Target Start/End: Complemental strand, 25059124 - 25058906
Alignment:
Q  37 aagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttc 136  Q
    ||||||||||||| |||||||||  |  || ||  |||||||| || |||||||||||||||||  ||||||||||||||  || | |||||| ||| ||    
T  25059124 aagcttaggagctgaattgaagcaaaaattagggttaatcttcttcaaaggtaagggggttagttattatcataatcatgcacaatttttgcattttctc 25059025  T
Q  137 atgatttggatgaaa-tgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataata 235  Q
    |||  ||| |||||| ||||||||          || | ||||||||||||||||||||||   || ||||| ||| ||  | ||||||||||||| ||     
T  25059024 atg--ttgtatgaaaatgggttga----------tgaacaattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattgatgatt 25058937  T
Q  236 attgtatgattgttggttaaattacatgttt 266  Q
    || ||||| |||| ||| |||||||||||||    
T  25058936 atggtatgtttgtgggtgaaattacatgttt 25058906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 1467657 - 1467712
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  1467657 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 1467712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 82 - 266
Target Start/End: Original strand, 12902006 - 12902179
Alignment:
Q  82 ctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatg-aaatgggttgaaatgaatgaatggataattgt 180  Q
    |||||||||||||||||||  | |||||||||||||||| | |||||| ||| |||||  ||| ||| ||||||||||          ||| |||||| |    
T  12902006 ctaaggtaagggggttagttatcatcataatcatgttcaatttttgcattttctcatg--ttgtatgaaaatgggttg----------atgaataatttt 12902093  T
Q  181 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 266  Q
    ||||||||||||||||   || ||||| ||| ||  | ||||||||||||| || || ||||| |||| ||| |||||||||||||    
T  12902094 tgctaaattcgtgctcttgctgtgatgttattttcttgtgcatgaattgatgattatggtatgtttgtgggtgaaattacatgttt 12902179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 266
Target Start/End: Original strand, 15468338 - 15468429
Alignment:
Q  175 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 266  Q
    ||||||||||||||||||||||   || ||||| ||| ||  | ||||||||||||| || || ||||| |||| ||| |||||||||||||    
T  15468338 aattgttgctaaattcgtgctcttgctatgatgctattttcttgtgcatgaattgatgattatggtatgtttgtgggtgaaattacatgttt 15468429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 12812179 - 12812125
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcat 138  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| ||||    
T  12812179 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcat 12812125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 15468246 - 15468291
Alignment:
Q  72 taatcttcatctaaggtaagggggttagtctttatcataatcatgt 117  Q
    |||||||| || |||||||||||||||||  |||||||||||||||    
T  15468246 taatcttcttcaaaggtaagggggttagttattatcataatcatgt 15468291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 115
Target Start/End: Complemental strand, 2844546 - 2844514
Alignment:
Q  83 taaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||||||||| ||||||||||||||    
T  2844546 taaggtaagggggttagtttttatcataatcat 2844514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 115
Target Start/End: Complemental strand, 3992905 - 3992873
Alignment:
Q  83 taaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||||||||| ||||||||||||||    
T  3992905 taaggtaagggggttagtttttatcataatcat 3992873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 265
Target Start/End: Original strand, 4145814 - 4145894
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtt 265  Q
    |||||||| |||||| | || ||||||||||| || ||||||||| | ||||||| ||  |||||| | ||||||||||||    
T  4145814 aaattcgtactccaattatggtgatatgtttgaatacatgaattggtgataattgaattgttgttgatgaaattacatgtt 4145894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 5240584 - 5240632
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaag 86  Q
    |||||| |||||||||||||||||| ||| ||  |||||||||||||||    
T  5240584 agcttacgagctaaattgaagcctaagttgggattaatcttcatctaag 5240632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 115
Target Start/End: Original strand, 15857163 - 15857195
Alignment:
Q  83 taaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||||||||| |||||||||||    
T  15857163 taaggtaagggggttagtcttcatcataatcat 15857195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 115
Target Start/End: Complemental strand, 19232121 - 19232089
Alignment:
Q  83 taaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||||||||||||| |||||||    
T  19232121 taaggtaagggggttagtctttatcttaatcat 19232089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 265
Target Start/End: Original strand, 47784767 - 47784847
Alignment:
Q  186 aattcgtgctccaactttgatgatatgtttgtatgcatgaa-ttgataataattgtatgattgttggttaaattacatgtt 265  Q
    ||||||||||| || | |||||||||||||| ||||||||| ||| | ||||||| ||  |||||||| ||||| ||||||    
T  47784767 aattcgtgctctaattatgatgatatgtttgaatgcatgaagttgttgataattgaattgttgttggtgaaatttcatgtt 47784847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 115
Target Start/End: Original strand, 54038024 - 54038056
Alignment:
Q  83 taaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||||||||| ||||||||||||||    
T  54038024 taaggtaagggggttagtttttatcataatcat 54038056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 115
Target Start/End: Complemental strand, 55513225 - 55513193
Alignment:
Q  83 taaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||||||||| ||||||||||||||    
T  55513225 taaggtaagggggttagtttttatcataatcat 55513193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 9 - 319
Target Start/End: Original strand, 1423 - 1732
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1423 gagaagaacttgaagaatcct-ttgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 1521  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1522 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 1621  T
Q  209 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1622 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 1721  T
Q  309 gtgaatttgac 319  Q
     ||||||||||    
T  1722 atgaatttgac 1732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 9 - 319
Target Start/End: Original strand, 36906 - 37216
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36906 gagaagaacttgaagaatccaattgggtaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 37005  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    ||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37006 taatcatgttcattccttacaatttttcatgatttgtatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 37105  T
Q  209 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37106 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 37205  T
Q  309 gtgaatttgac 319  Q
     ||||||||||    
T  37206 atgaatttgac 37216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 279; Significance: 1e-156; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 9 - 319
Target Start/End: Complemental strand, 51452914 - 51452605
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  51452914 gagaggaacttgaagaatcca-ttgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatct 51452816  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  51452815 taatcatgttcattctttgcaatttttcatgatttgtatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgcttcaactttgatga 51452716  T
Q  209 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  51452715 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttaaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 51452616  T
Q  309 gtgaatttgac 319  Q
     ||||||||||    
T  51452615 atgaatttgac 51452605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 9 - 316
Target Start/End: Complemental strand, 45051832 - 45051539
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  45051832 gagaagaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatttaaggtaagggggttagtctttatca 45051733  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatg-aaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatg 207  Q
    |||||||| | ||  |||||| ||| |||||  ||| ||| ||||||||||          ||| | ||||  ||||| ||||||| ||  ||| |||||    
T  45051732 taatcatg-tgat--tttgcattttctcatg--ttgtatgaaaatgggttg----------atgaacaattcatgctagattcgtgttcttactgtgatg 45051648  T
Q  208 atatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatg 307  Q
     || |||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||| ||||||| ||||| ||||||||||||  |||     
T  45051647 ttacgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgataagttgtgaaaattgtgctcaatt 45051548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 9 - 316
Target Start/End: Complemental strand, 2116664 - 2116371
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||  ||||||    
T  2116664 gagaagaacttgaagaatccaattgggaaagcttatgagctaaattgaagcctaggtttggtctaatcttcatttaaggtaaaggggttagtgattatca 2116565  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggat-gaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatg 207  Q
    |||||||| | ||  |||||| ||| |||||  ||| ||  ||||||||||          ||| | ||||  ||||| |||||||||   ||| |||||    
T  2116564 taatcatg-taat--tttgcattttctcatg--ttgtataaaaatgggttg----------atgaacaattcatgctagattcgtgcttttactgtgatg 2116480  T
Q  208 atatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatg 307  Q
     ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||| ||||||| ||||| ||||||| ||||  |||     
T  2116479 ttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgataagttgtgaaaatggtgctcaatt 2116380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 38 - 316
Target Start/End: Complemental strand, 20931727 - 20931461
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 137  Q
    ||||||| ||||||| ||||||||| ||| ||  ||||||| |||||||||||||||||||| |||||||||||||||  |||||  |||||| ||||||    
T  20931727 agcttagcagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagcctttatcataatcatcctcatt--ttgcaaattttca 20931630  T
Q  138 tgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataat 237  Q
        ||| |||||    |||    ||  |  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  20931629 attgttgtatgaa----gtt----tgctt--atggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataat 20931540  T
Q  238 tgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||| |||||||||| ||||||||||||   |||||| ||||||| |||||||||||||||||| |||| |||||||||    
T  20931539 tgtaagattgttggtgaaattacatgttcatatatgtaaaaatgataagttatgaaaattgtgctaaattggtgaattt 20931461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 38 - 316
Target Start/End: Complemental strand, 20913412 - 20913146
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 137  Q
    ||||||||||||||| ||||||||| ||| ||  ||||||| |||||||||||||||||||||||||||| |||||||  |||||  |||||| ||||||    
T  20913412 agcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcgtaatcatcctcatt--ttgcaaattttca 20913315  T
Q  138 tgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataat 237  Q
        ||| ||||| |  | | |           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  20913314 attgttgtatgaattttgcttac----------ggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataat 20913225  T
Q  238 tgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||| |||||||||| ||||||||||||   |||||| ||||||| ||||||||||||||||||  ||| |||||||||    
T  20913224 tgtaagattgttggtgaaattacatgttcatatatgtaaaaatgataagttatgaaaattgtgctcaattggtgaattt 20913146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 169 - 316
Target Start/End: Complemental strand, 41394485 - 41394338
Alignment:
Q  169 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 268  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||| || |||||||||  |    
T  41394485 atggatgattgttgctaaattcgtgctccaactatgatgatatgtttgtatgcataaattgatgataattgtatgattgttggtgaagttacatgttcaa 41394386  T
Q  269 atatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||||| ||||||| ||||| ||||||||||||  ||| |||||||||    
T  41394385 atatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattt 41394338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 38 - 265
Target Start/End: Original strand, 37844329 - 37844546
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 137  Q
    ||||||||||||||||||||||||| ||| ||  |||| || ||||||||||||||||||||||||||||||||||||  ||||| | || | |||   |    
T  37844329 agcttaggagctaaattgaagcctaagttgggattaatttttatctaaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaa 37844428  T
Q  138 tgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataat 237  Q
    ||  ||| ||||| |   ||    || || ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||    
T  37844429 tg--ttgtatgaatt---tt----tgcat-aatggataattgttgctaaattcatgctccaactatgatgatatgtttgtatgcatgaattgatgataat 37844518  T
Q  238 tgtatgattgttggttaaattacatgtt 265  Q
    ||||||||||||||| ||||||||||||    
T  37844519 tgtatgattgttggtgaaattacatgtt 37844546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 38 - 265
Target Start/End: Complemental strand, 20446064 - 20445846
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 137  Q
    |||||||||| |||||||||||||| ||| ||  ||||||| |||||||||||||| |||||||||||||||||||||  ||||| | || |||||| ||    
T  20446064 agcttaggagttaaattgaagcctaagttgggattaatctttatctaaggtaagggagttagtctttatcataatcatcatcattttgtgaaatttt-ca 20445966  T
Q  138 tgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataat 237  Q
        ||| ||||| |   ||    || || |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||    
T  20445965 aatgttgtatgaatt---tt----tgcat-aatggataattgttgctaaattcgtgctccaattgtgatgatatgtttgtatgcatgaattgatgataat 20445874  T
Q  238 tgtatgattgttggttaaattacatgtt 265  Q
    ||||||||||||||| ||||||||||||    
T  20445873 tgtatgattgttggtgaaattacatgtt 20445846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 38 - 316
Target Start/End: Original strand, 20893506 - 20893773
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 137  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| | |||||||||||||||||||||| |||||||||||  |||||  ||| |||||| ||    
T  20893506 agcttaggagctaaattgaagcctaagttgggattaatctttacctaaggtaagggggttagtcttcatcataatcatcatcatt--ttgtaatttt-ca 20893602  T
Q  138 tgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataat 237  Q
        ||| ||||| |   ||    || || ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||    
T  20893603 aatgttgtatgaatt---tt----tgcat-aatggataattgttgctaaattcttgctccaactgtgatgatatgtttgtatgcatgaattgatgataat 20893694  T
Q  238 tgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    ||||||||||||| | ||||||||||||  |||| |   |||||| ||||| ||||||||||||  ||| |||||||||    
T  20893695 tgtatgattgttgttgaaattacatgttcaaataggaacaaatgataagttgtgaaaattgtgctcaattggtgaattt 20893773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 168 - 265
Target Start/End: Complemental strand, 20531708 - 20531611
Alignment:
Q  168 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtt 265  Q
    |||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  20531708 aatggataattgttgctaaattcgtgctccaaatgtgataatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgtt 20531611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 7640777 - 7640882
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||    ||||||  |||||||| ||||||||||||||||||||  ||||||    
T  7640777 gagaagaacttgaagaatccaattgggtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatca 7640876  T
Q  109 taatca 114  Q
    ||||||    
T  7640877 taatca 7640882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 15 - 300
Target Start/End: Complemental strand, 22228215 - 22227941
Alignment:
Q  15 aacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatca 114  Q
    ||||||||||||| | | ||| ||||||| ||||| |||||||||    ||| ||  ||||| || || |||||||||||||||||  ||||||||||||    
T  22228215 aacttgaagaatcaattggggtaagcttaagagctgaattgaagcaagagttagggttaatcatcttcaaaggtaagggggttagttattatcataatca 22228116  T
Q  115 tgttcattctttgcaatttttcatgatttggatgaaa-tgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgt 213  Q
    ||| || | |||||| ||| |||||  ||| |||||| ||||||||          || | |||| |||||||||||||||||   || ||||| ||| |    
T  22228115 tgtacaatttttgcattttctcatg--ttgtatgaaaatgggttga----------tgaacaattcttgctaaattcgtgctcttgctgtgatgttattt 22228028  T
Q  214 ttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtg 300  Q
    |  | ||||||||||||| ||||||||||||||||| || ||||||||||||  ||||||| ||||||| |||||||||||||||||    
T  22228027 tcttgtgcatgaattgatgataattgtatgattgttagtgaaattacatgttcaaatatgtaaaaatgataagttatgaaaattgtg 22227941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 9 - 119
Target Start/End: Complemental strand, 46523801 - 46523691
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||| ||||||||||| |||||| ||||    ||||||  |||||||| ||||||||||||||||||||  ||||||    
T  46523801 gagaagaacttgaagaatccaattgggtaagcttaggagataaattaaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatca 46523702  T
Q  109 taatcatgttc 119  Q
    |||||||||||    
T  46523701 taatcatgttc 46523691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 22035860 - 22035755
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||| ||||||||||||| |||||||||    ||||||  |||||||| ||||||||||||||||||||  ||||||    
T  22035860 gagaagaacttgaagaatccaattgggtaagcttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatca 22035761  T
Q  109 taatca 114  Q
    ||||||    
T  22035760 taatca 22035755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 175 - 300
Target Start/End: Complemental strand, 22232763 - 22232638
Alignment:
Q  175 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgt 274  Q
    |||| |||||||||||||||||   || ||||| ||| ||  | ||||||||||||| ||||||||||||||||| || ||||||||||||  |||||||    
T  22232763 aattcttgctaaattcgtgctcttgctgtgatgttattttcttgtgcatgaattgatgataattgtatgattgttagtgaaattacatgttcaaatatgt 22232664  T
Q  275 gaaaatgaaaagttatgaaaattgtg 300  Q
     ||||||| |||||||||||||||||    
T  22232663 aaaaatgataagttatgaaaattgtg 22232638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 5072388 - 5072523
Alignment:
Q  181 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 280  Q
    ||||||||||||||||   || ||||| ||||||| |||||||||||||||  || |||||||||||||||| ||||||||||||   |||||  |||||    
T  5072388 tgctaaattcgtgctcttgctgtgatgttatgtttatatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 5072487  T
Q  281 gaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    || |||||||||| |||||||  ||| |||||||||    
T  5072488 gataagttatgaatattgtgctcaattggtgaattt 5072523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 18601118 - 18601253
Alignment:
Q  181 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 280  Q
    |||||||||| |||||   || ||||| |||||||||||||||||||||||  || |||||||||||||||| ||||||||||||   |||||  |||||    
T  18601118 tgctaaattcatgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 18601217  T
Q  281 gaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    || |||||||||| |||||||  ||| |||||||||    
T  18601218 gataagttatgaatattgtgctcaattggtgaattt 18601253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 20531828 - 20531751
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||| |||||||||||||| ||| ||  ||||||| |||||||||||||   ||||||||||||||||||||    
T  20531828 agcttaggagataaattgaagcctaagttgggattaatctttatctaaggtaaggaaattagtctttatcataatcat 20531751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 115
Target Start/End: Complemental strand, 41394559 - 41394527
Alignment:
Q  83 taaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||||||||||||||||||||||||    
T  41394559 taaggtaagggggttagtctttatcataatcat 41394527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 115
Target Start/End: Original strand, 15861327 - 15861358
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||||||||||||||||||||    
T  15861327 aaggtaagggggttagtctttatcataatcat 15861358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Complemental strand, 17004976 - 17004921
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  17004976 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 17004921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 19962417 - 19962472
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  19962417 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 19962472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 5072260 - 5072337
Alignment:
Q  40 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgt 117  Q
    |||||||||| |||||||||  || || ||  |||||||| || |||||||||||||||||  |||||| ||||||||    
T  5072260 cttaggagctgaattgaagcaaagattagggttaatcttcttcaaaggtaagggggttagttattatcacaatcatgt 5072337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 18059634 - 18059731
Alignment:
Q  42 taggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||| |||||||||   |||| ||  ||||| || || |||||||||||||||||  |||||||||||||||  | |||||||| ||| |||||    
T  18059634 taggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttattatcataatcatgtataatctttgcattttctcatg 18059731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 22143361 - 22143402
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa 226  Q
    |||||||||||| |||| ||||||| ||||||||||||||||    
T  22143361 aaattcgtgctctaactatgatgatgtgtttgtatgcatgaa 22143402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 38055009 - 38055054
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgca 129  Q
    |||||||||||||||||  ||||||||||||||| || ||||||||    
T  38055009 aaggtaagggggttagttattatcataatcatgtacaatctttgca 38055054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 115
Target Start/End: Complemental strand, 21860366 - 21860334
Alignment:
Q  83 taaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||||||||| ||||||||||||||    
T  21860366 taaggtaagggggttagtttttatcataatcat 21860334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 115
Target Start/End: Original strand, 44034871 - 44034903
Alignment:
Q  83 taaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||||||||| ||||||||||||||    
T  44034871 taaggtaagggggttagtttttatcataatcat 44034903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 9 - 316
Target Start/End: Complemental strand, 5951 - 5645
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  5951 gagaagaacttgaggaatc-aattgggtaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttacca 5853  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatga 208  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||     
T  5852 taatcatgttcattctttacaatttttcatgatttgtatgaaatggattgaaacgaatgaatgaataattgttgctaaattcgtgctccaactttgatgt 5753  T
Q  209 tatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgg 308  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||| ||||||| ||||||| |||| ||||| |||||||  ||| |    
T  5752 tatgtttgtatgcatgaattgatgatgattgtatgattgttggtgaaattacatgtttaaatatgtaaaaatgataagtcatgaatattgtgctcaattg 5653  T
Q  309 gtgaattt 316  Q
    ||||||||    
T  5652 gtgaattt 5645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 134; Significance: 1e-69; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 49 - 301
Target Start/End: Complemental strand, 13890 - 13637
Alignment:
Q  49 taaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatg 148  Q
    |||| ||||||||| ||||||  ||||| | |||||||||||||||||||||||| |||||||||||||| |||  ||||||||| ||||   ||| |||    
T  13890 taaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcatgtttatttattgcaatttctcatttgttgtatg 13791  T
Q  149 aa-atgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattg 247  Q
    || |||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  13790 aatatgggttgaattgaataaatggataattgttgctaaattcgtgctctaactttgatgttatgtttgtatgcatgaattgatgataattgtatgattg 13691  T
Q  248 ttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgc 301  Q
    ||||| ||||||||||||  | ||||| ||||||  ||||| ||||||||||||    
T  13690 ttggtgaaattacatgttcaattatgtaaaaatgtgaagttgtgaaaattgtgc 13637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 130; Significance: 3e-67; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 37 - 301
Target Start/End: Original strand, 1657615 - 1657880
Alignment:
Q  37 aagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttc 136  Q
    ||||||||||||| ||||||| |    ||||||  |||||||| ||||||||||||||||||||||| ||||||||||||||||||  ||||||||| ||    
T  1657615 aagcttaggagctgaattgaaacaagagtttgggttaatcttcttctaaggtaagggggttagtcttcatcataatcatgttcatttattgcaatttctc 1657714  T
Q  137 atgatttggatgaa-atgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataata 235  Q
    ||   ||| ||||| |||||||||| ||||| ||||||||||||||||||||||||||||| |||| ||||| |||||||| |||||||||||||| |||    
T  1657715 atttgttgtatgaatatgggttgaattgaataaatggataattgttgctaaattcgtgctctaactgtgatgttatgtttggatgcatgaattgatgata 1657814  T
Q  236 attgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgc 301  Q
    ||||||||||||||||| |||| |||||||  | ||||| ||||||  ||||||||||||||||||    
T  1657815 attgtatgattgttggtgaaatcacatgttcaattatgtaaaaatgtgaagttatgaaaattgtgc 1657880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 9 - 316
Target Start/End: Original strand, 1649947 - 1650240
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1649947 gagaagaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatttaaggtaagggggttagtctttatca 1650046  T
Q  109 taatcatgttcattctttgcaatttttcatgatttggatg-aaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatg 207  Q
    |||||||| | ||  |||||| ||| |||||  ||| ||| ||||||||||          ||| | ||||  ||||| ||||||||||  ||| |||||    
T  1650047 taatcatg-taat--tttgcattttctcatg--ttgtatgaaaatgggttg----------atgaacaattcatgctagattcgtgctcttactgtgatg 1650131  T
Q  208 atatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatg 307  Q
     || |||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||| | ||||| ||||| ||||||||||||  |||     
T  1650132 ttacgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaagaatgataagttgtgaaaattgtgctcaatt 1650231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 37 - 301
Target Start/End: Complemental strand, 15862867 - 15862602
Alignment:
Q  37 aagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttc 136  Q
    ||||||||||| | |||||||||    ||||||  |||||||| ||||||||||||||||||||||| ||||||||||||||||||  ||||||||| ||    
T  15862867 aagcttaggaggtgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagtcttcatcataatcatgttcatttattgcaatttctc 15862768  T
Q  137 atgatttggatgaa-atgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataata 235  Q
    ||   ||| ||||| |||||||||| ||||| |||||||||||||| |||||||||||||| |||| ||||| ||||||||||||||||||||||| |||    
T  15862767 atttgttgtatgaatatgggttgaattgaataaatggataattgttactaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattgatgata 15862668  T
Q  236 attgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgc 301  Q
    ||||||||||||||||| |||| |||||||  | |||||  |||||  ||||||||||||||||||    
T  15862667 attgtatgattgttggtgaaatcacatgttcaattatgtataaatgtgaagttatgaaaattgtgc 15862602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 45 - 316
Target Start/End: Original strand, 35009314 - 35009586
Alignment:
Q  45 gagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttg 144  Q
    |||||||| ||||||| | ||||||  ||||| | |||||| ||||||||||||||||| ||||||||||||||||||  ||||||||| ||||   |||    
T  35009314 gagctaaagtgaagccaaagtttggattaatcattatctaaagtaagggggttagtcttcatcataatcatgttcatttattgcaatttctcatttgttg 35009413  T
Q  145 gatgaa-atgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatg 243  Q
     ||||| |||||||||| ||||  ||||||||||||||||||||||||||||| |||| ||||| || |||||||||||||||||||| |||||||||||    
T  35009414 tatgaatatgggttgaattgaagaaatggataattgttgctaaattcgtgctctaactgtgatgttaagtttgtatgcatgaattgatgataattgtatg 35009513  T
Q  244 attgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    ||||||||| ||||||||||||  | ||||| ||||||  ||||| ||||||||||||  ||| |||||||||    
T  35009514 attgttggtgaaattacatgttcaattatgtaaaaatgtgaagttttgaaaattgtgctcaattggtgaattt 35009586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 38 - 252
Target Start/End: Complemental strand, 27751819 - 27751605
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 137  Q
    ||||||||||||||||||||||||| ||||||  ||||||| |||||||||||||||||||||||| ||||||||||||||||||  ||||||||| |||    
T  27751819 agcttaggagctaaattgaagcctaagtttggattaatctttatctaaggtaagggggttagtcttcatcataatcatgttcatttattgcaatttctca 27751720  T
Q  138 tgatttggatgaa-atgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataa 236  Q
    |  | || ||||| |||||||||| ||||| ||||||||| ||| ||||||||||||||| || | ||||| ||||||||||||||||||||||| | ||    
T  27751719 t-ttgtgtatgaatatgggttgaattgaataaatggataaatgtagctaaattcgtgctctaattgtgatgttatgtttgtatgcatgaattgatgacaa 27751621  T
Q  237 ttgtatgattgttggt 252  Q
    ||||||||||||||||    
T  27751620 ttgtatgattgttggt 27751605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 38 - 316
Target Start/End: Complemental strand, 23153831 - 23153563
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 137  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| | |||||||||||||||||||||| |||||||||||  |||||  ||| || ||||||    
T  23153831 agcttaggagctaaattgaagcctaagttgggattaatctttacctaaggtaagggggttagtcttcatcataatcatcatcatt--ttgtaaattttca 23153734  T
Q  138 tgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataat 237  Q
        ||| ||||| |   ||    || || |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  23153733 aatgttgtatgaatt---tt----tgcat-aatggataattgtttctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataat 23153642  T
Q  238 tgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    ||||||||||||||| ||||||||||||  |||| |   |||||| ||||| ||||||||||||  ||| |||||||||    
T  23153641 tgtatgattgttggtgaaattacatgttcaaataggaacaaatgataagttgtgaaaattgtgctcaattggtgaattt 23153563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 169 - 300
Target Start/End: Original strand, 14626118 - 14626249
Alignment:
Q  169 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 268  Q
    |||||||||| |||||||||||||||||   || ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  |    
T  14626118 atggataattattgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaa 14626217  T
Q  269 atatgtgaaaatgaaaagttatgaaaattgtg 300  Q
    |||||| ||||||| |||||||||||||||||    
T  14626218 atatgtaaaaatgataagttatgaaaattgtg 14626249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 266
Target Start/End: Complemental strand, 29666280 - 29666040
Alignment:
Q  17 cttgaagaatccaattgggaa-agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||| |||||||   ||||||||||||||||||||||||| ||||||  ||||| | ||||||  |||| ||||||||||| |||||||||||    
T  29666280 cttgaagaatcaaattggggtgagcttaggagctaaattgaagcctaagtttggattaatcattatctaacataagtgggttagtcttcatcataatcat 29666181  T
Q  116 gttcattctttgcaatttttcatgatttggatg-aaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtt 214  Q
    ||||| |  ||||||||| ||||   ||| ||| ||||||| ||          |||||||||||||| ||||||||||||| | || ||||| ||| ||    
T  29666180 gttcaattattgcaatttctcat-tgttgtatgaaaatggggtg----------atggataattgttgttaaattcgtgctctagctgtgatgttatttt 29666092  T
Q  215 tgtatgcatgaattgataataattgtatgattgttggttaaattacatgttt 266  Q
      |||| |||||||||| |||||||||||||||| ||| |||||||||||||    
T  29666091 cttatgtatgaattgatgataattgtatgattgtgggtgaaattacatgttt 29666040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 9 - 139
Target Start/End: Complemental strand, 23978182 - 23978052
Alignment:
Q  9 gagatgaacttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatca 108  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||    ||||||  |||||||| ||||||||||||| ||||||  ||||||    
T  23978182 gagaagaacttgaagaatccaattgggtaagcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggcgttagttattatca 23978083  T
Q  109 taatcatgttcattctttgcaatttttcatg 139  Q
    ||||||||| || | |||||| ||| |||||    
T  23978082 taatcatgtacaatttttgcattttctcatg 23978052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 181 - 316
Target Start/End: Complemental strand, 25175815 - 25175680
Alignment:
Q  181 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 280  Q
    ||||||||||||||||   || || || |||||||||||||||||||||||  || |||||| ||||||||| ||||||||||||   |||||  |||||    
T  25175815 tgctaaattcgtgctcttgctgtgttgttatgtttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaat 25175716  T
Q  281 gaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    || |||||||||| ||||||| |||| |||||||||    
T  25175715 gataagttatgaagattgtgctaaattggtgaattt 25175680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 27653983 - 27654118
Alignment:
Q  181 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 280  Q
    ||||||||||||||||   || ||||| |||| ||||||||||||||||||  || |||||| ||||||||| ||||||||||||   |||||  |||||    
T  27653983 tgctaaattcgtgctcttgctgtgatgttatgcttgtatgcatgaattgatgttagttgtataattgttggtgaaattacatgttcatatatgcaaaaat 27654082  T
Q  281 gaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    || |||||||||| ||||||| |||| |||||||||    
T  27654083 gataagttatgaagattgtgctaaattggtgaattt 27654118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 23995324 - 23995247
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||| ||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  23995324 agcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 23995247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 23148380 - 23148303
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| | |||||||||||||||||||||| |||||||||||    
T  23148380 agcttaggagctaaattgaagcctaagttgggattaatctttacctaaggtaagggggttagtcttcatcataatcat 23148303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 41 - 196
Target Start/End: Original strand, 16299844 - 16299999
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatg-ttcattctttgcaatttttcatg 139  Q
    |||||||||||| ||||||||| ||||||  ||||| | | ||||||||||||||||||||||  || |||||||| ||  || ||||||||||| | ||    
T  16299844 ttaggagctaaagtgaagcctaagtttggattaatcattacctaaggtaagggggttagtcttcttcttaatcatgattgtttgtttgcaattttccttg 16299943  T
Q  140 atttggatgaaatgggttgaaatgaatgaatggataattgttgct-aaattcgtgctc 196  Q
      ||| ||||||||||||||   |||||||| ||||||||||| | ||||||||||||    
T  16299944 --ttgtatgaaatgggttgattagaatgaattgataattgttgttaaaattcgtgctc 16299999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 16825752 - 16825889
Alignment:
Q  181 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgta--tgattgttggttaaattacatgtttgaatatgtgaaa 278  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||||  || |||||  | ||||||||| ||||||||||||   |||||  |||    
T  16825752 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtaattaattgttggtgaaattacatgttcatatatgcaaaa 16825851  T
Q  279 atgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||| |||||||||| ||||||| |||| |||| ||||    
T  16825852 atgataagttatgaagattgtgctaaattggtggattt 16825889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 15742078 - 15742150
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatc 113  Q
    |||||||||||| ||||||||| ||||||  ||||| | | ||||||||||||||||||||||||||||||||    
T  15742078 ttaggagctaaagtgaagcctaagtttggattaatcattacctaaggtaagggggttagtctttatcataatc 15742150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 32276617 - 32276691
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||| |||||| || ||||||  ||||| | |||||||||||||||||||||||| |||||||||||    
T  32276617 ttaggagctaaagtgaagcttaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcat 32276691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 266
Target Start/End: Complemental strand, 16232274 - 16232059
Alignment:
Q  40 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||| |||||||||    ||||||  |||||||| ||||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  16232274 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 16232175  T
Q  140 atttggatg-aaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataatt 238  Q
      ||| ||| ||||||||||          ||| | ||||||||||||||||||||||   || ||||| ||| ||  | ||||||||||||| || ||     
T  16232174 --ttgtatgaaaatgggttg----------atgaacaattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattgatgattatg 16232087  T
Q  239 gtatgattgttggttaaattacatgttt 266  Q
    ||||| |||| ||| |||||||||||||    
T  16232086 gtatgtttgtgggtgaaattacatgttt 16232059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 266
Target Start/End: Complemental strand, 1556390 - 1556172
Alignment:
Q  37 aagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttc 136  Q
    ||||||||||||| |||||||||    |||||   |||||||| ||||||||||||||||||||  | |||||||||||||||| | |||||| ||| ||    
T  1556390 aagcttaggagctgaattgaagcaagagtttgtgttaatcttcttctaaggtaagggggttagttatcatcataatcatgttcaatttttgcattttctc 1556291  T
Q  137 atgatttggatg-aaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataata 235  Q
    |||  ||| ||| ||||||||||          ||| | ||||||||||||||||||||||   || ||||| ||| ||  | ||||||||||||| ||     
T  1556290 atg--ttgtatgaaaatgggttg----------atgaacaattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattgatgatt 1556203  T
Q  236 attgtatgattgttggttaaattacatgttt 266  Q
    || ||||| |||| ||| |||||||||||||    
T  1556202 atggtatgtttgtgggtgaaattacatgttt 1556172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 19610403 - 19610323
Alignment:
Q  37 aagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgt 117  Q
    ||||||||||||| |||||||||    ||||||  |||||||| ||||||||||||||||||||  |||||||||||||||    
T  19610403 aagcttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgt 19610323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 18002353 - 18002427
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||| ||||| ||| |||| |  ||||| | | ||||||||||||||||||||||||||||||||||    
T  18002353 ttaggagctaaagtgaaggctaagtttagattaatcataacctaaggtaagggggttagtctttatcataatcat 18002427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 18823241 - 18823352
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat-gttcattctttgcaatttttcatg 139  Q
    |||||||||||| |||||  || ||||||  ||||| | | |||||||||||||||||||||| |||||||||||  ||  || ||||||||||||| ||    
T  18823241 ttaggagctaaagtgaagtttaagtttggattaatcataacctaaggtaagggggttagtcttcatcataatcataattgtttgtttgcaatttttcttg 18823340  T
Q  140 atttggatgaaa 151  Q
     |||| ||||||    
T  18823341 gtttgtatgaaa 18823352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 18839096 - 18839207
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat-gttcattctttgcaatttttcatg 139  Q
    |||| ||||||| |||||| || ||||||  ||||| | | |||||||||||||||||||||| |||||||||||  ||  || ||||||||||||| ||    
T  18839096 ttagaagctaaagtgaagcttaagtttggattaatcataacctaaggtaagggggttagtcttcatcataatcataattgtttgtttgcaatttttcttg 18839195  T
Q  140 atttggatgaaa 151  Q
     |||| ||||||    
T  18839196 gtttgtatgaaa 18839207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 115
Target Start/End: Complemental strand, 26090133 - 26090059
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||| ||||||||| |||| |  | | | | | ||||||||||||||||||||||||||||||||||    
T  26090133 ttaggagctaaagtgaagcctaagtttagattgagcattacctaaggtaagggggttagtctttatcataatcat 26090059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 265
Target Start/End: Original strand, 18629608 - 18629689
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattgtatgattgttggttaaattacatgtt 265  Q
    |||||||||||| || | |||||||||||||| ||||||| ||||||| ||||||| ||  |||||||| ||||| ||||||    
T  18629608 aaattcgtgctctaattatgatgatatgtttgaatgcatgaaattgatgataattgaattgttgttggtgaaattgcatgtt 18629689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 265
Target Start/End: Complemental strand, 29605696 - 29605616
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtt 265  Q
    |||||||||||| || | || ||||||||||| |||||||||||  | ||||||| ||  |||||||| ||||||||||||    
T  29605696 aaattcgtgctctaattatggtgatatgtttgaatgcatgaattagtgataattgaattgttgttggtgaaattacatgtt 29605616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 115
Target Start/End: Complemental strand, 4991427 - 4991396
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||||||||||||||||||||    
T  4991427 aaggtaagggggttagtctttatcataatcat 4991396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Complemental strand, 10489037 - 10488982
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  10489037 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 10488982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 16376291 - 16376346
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  16376291 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 16376346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 16383615 - 16383670
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  16383615 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 16383670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 16556057 - 16556112
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  16556057 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 16556112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 16632613 - 16632668
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  16632613 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 16632668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 16887792 - 16887847
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattg 239  Q
    |||||||||||| |||| |||| ||||||||||||||||| ||||||| |||||||    
T  16887792 aaattcgtgctctaactatgataatatgtttgtatgcatgaaattgatgataattg 16887847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 187 - 258
Target Start/End: Original strand, 17083200 - 17083271
Alignment:
Q  187 attcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaatt 258  Q
    |||||||||| || | |||||||||||||| |||||||||||| | ||||||| ||  |||||||| |||||    
T  17083200 attcgtgctctaattatgatgatatgtttgaatgcatgaattggtgataattgaattgttgttggtgaaatt 17083271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 40 - 139
Target Start/End: Original strand, 18086697 - 18086796
Alignment:
Q  40 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||| |||||||||    ||||||  |||||||| ||||||||||||||||||||  |||  |||||||||| || | |||||| ||| |||||    
T  18086697 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattagtataatcatgtacaatttttgcattttctcatg 18086796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Complemental strand, 19299575 - 19299520
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  19299575 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 19299520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 35136013 - 35136068
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattg 239  Q
    |||||||||||| ||||  ||||||||||||||||||||| ||||||| |||||||    
T  35136013 aaattcgtgctctaactaggatgatatgtttgtatgcatgaaattgatgataattg 35136068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 139
Target Start/End: Original strand, 13620669 - 13620767
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||| ||||||||  |||||   | ||| | | ||||||||||||||||||||||  |||||||||||| || | |||||| ||| |||||    
T  13620669 ttaggagctaaagtgaagcctgagtttgaattgatcataacctaaggtaagggggttagtcttcttcataatcatgtacaatttttgcattttctcatg 13620767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 196
Target Start/End: Complemental strand, 19629617 - 19629567
Alignment:
Q  146 atgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctc 196  Q
    ||||||||||||||   |||||||| ||||||||||| |||||||||||||    
T  19629617 atgaaatgggttgattggaatgaattgataattgttgttaaattcgtgctc 19629567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 29869650 - 29869724
Alignment:
Q  40 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatca 114  Q
    |||||||||| |||||||||    ||||||  | |||||| ||||||||||||||||||||  ||||||||||||    
T  29869650 cttaggagctgaattgaagcaagagtttgggttgatcttcttctaaggtaagggggttagttattatcataatca 29869724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 22225614 - 22225711
Alignment:
Q  42 taggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||| |||||||||   |||| ||  ||||| || || |||||| ||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  22225614 taggagctgaattgaagcaagggttaggaataatcatcttcaaaggtatgggggttagttattatcataatcatgtacaatctttgcattttctcatg 22225711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 22251442 - 22251539
Alignment:
Q  42 taggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||| |||||||||   |||| ||  ||||| || || |||||| ||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  22251442 taggagctgaattgaagcaagggttaggaataatcatcttcaaaggtatgggggttagttattatcataatcatgtacaatctttgcattttctcatg 22251539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 33324939 - 33324898
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa 226  Q
    |||||||||||| ||||  |||||||||||||||||||||||    
T  33324939 aaattcgtgctctaactaggatgatatgtttgtatgcatgaa 33324898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 115
Target Start/End: Original strand, 19983192 - 19983224
Alignment:
Q  83 taaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||||||||| ||||||||||||||    
T  19983192 taaggtaagggggttagtttttatcataatcat 19983224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 115
Target Start/End: Original strand, 35015057 - 35015089
Alignment:
Q  83 taaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||||||||| ||||||||||||||    
T  35015057 taaggtaagggggttagtttttatcataatcat 35015089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 129; Significance: 1e-66; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 42 - 316
Target Start/End: Original strand, 8051 - 8327
Alignment:
Q  42 taggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaaggggg-ttagtctttatcataatcatgttcattctttgcaatttttcatga 140  Q
    ||||||||||| ||||||||| ||||||  ||||| | |||||||||||||||| |||||||| ||||||||||||||||||  ||||||||| ||||      
T  8051 taggagctaaaatgaagcctaagtttggattaatcattatctaaggtaaggggggttagtcttcatcataatcatgttcatttattgcaatttctcattt 8150  T
Q  141 tttggatgaa-atgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattg 239  Q
     ||| ||||| |||||||||| ||||| ||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||| | |||||||    
T  8151 gttgtatgaatatgggttgaattgaataaatggataattgttgctaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattggtgataattg 8250  T
Q  240 tatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    ||||||||||||| |||||||| |||  | ||||| ||||||  ||||| ||||||||||||  ||| |||||||||    
T  8251 tatgattgttggtgaaattacaggttcaattatgtaaaaatgtgaagttgtgaaaattgtgctcaattggtgaattt 8327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 38 - 316
Target Start/End: Original strand, 26295 - 26562
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 137  Q
    ||||||||||||||||||||||||| | | ||  ||||||||||||||||||||||||||||||||||||||||||||| |||||  ||| || ||||||    
T  26295 agcttaggagctaaattgaagcctaagatgggattaatcttcatctaaggtaagggggttagtctttatcataatcatgatcatt--ttgtaaattttca 26392  T
Q  138 tgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataat 237  Q
        ||| ||||| |         |  || |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  26393 aatgttgtatgaattt--------ttcat-aatgtataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcgtgaattgatgataat 26483  T
Q  238 tgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||| |||| ||||| ||| ||||||||  ||||||| ||||||| ||||| |||||||||| |  ||| |||||||||    
T  26484 tgtaagattattggtgaaagtacatgttcaaatatgtaaaaatgataagttgtgaaaattgttctcaattggtgaattt 26562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 189
Target Start/End: Complemental strand, 12160 - 11989
Alignment:
Q  19 tgaagaatccaattggga-aagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgt 117  Q
    ||||||||| |||||||  |||||||||||||||||||||||| | ||||||  ||||| | ||||||| |||||||||||||||| |||||||||||||    
T  12160 tgaagaatcaaattggggtaagcttaggagctaaattgaagccaaagtttggattaatcattatctaagataagggggttagtcttcatcataatcatgt 12061  T
Q  118 tcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaatt 189  Q
    ||| |  |||||| || || |   ||| |||||| |||||||    ||||||| ||||||||||| ||||||    
T  12060 tcaattattgcaacttctcctttgttgtatgaaacgggttgattgcaatgaattgataattgttgttaaatt 11989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 125; Significance: 3e-64; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 41 - 300
Target Start/End: Complemental strand, 42039 - 41780
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatga 140  Q
    |||||||||||| ||||||||| ||||||  ||||| | | |||||||||||||||||||||| ||||||||||||||||||  || |||||| ||||      
T  42039 ttaggagctaaagtgaagcctaagtttggattaatcattacctaaggtaagggggttagtcttcatcataatcatgttcatttatttcaatttctcattg 41940  T
Q  141 tttggatgaa-atgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattg 239  Q
    || | ||||| |||||||||| ||||| ||||||||||||||| ||||||||||||| |||| ||||| ||||||||||||||||||||||| |||||||    
T  41939 tt-gtatgaatatgggttgaattgaataaatggataattgttgttaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattgatgataattg 41841  T
Q  240 tatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtg 300  Q
    ||||||||||||| ||||||||||||  | ||||| ||||||  ||||| |||||||||||    
T  41840 tatgattgttggtgaaattacatgttcaattatgtaaaaatgtgaagttgtgaaaattgtg 41780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 109; Significance: 1e-54; HSPs: 3)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 38 - 301
Target Start/End: Original strand, 3463 - 3714
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 137  Q
    ||||||||||||||| ||||||||| ||| ||  ||||||| ||||||||||||||||||||||||| |||||||||| ||||||  ||| || ||||||    
T  3463 agcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttgtcataatcatcttcatt--ttgtaaattttca 3560  T
Q  138 tgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataat 237  Q
      | ||| ||||| |         ||| |  || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  3561 aaagttgtatgaattt--------tgatt--atagataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataat 3650  T
Q  238 tgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgc 301  Q
    ||||||||||||||| ||||||||||||  ||||||| ||||||| ||||| ||||||||||||    
T  3651 tgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgataagttgtgaaaattgtgc 3714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 169 - 316
Target Start/End: Complemental strand, 1387 - 1240
Alignment:
Q  169 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 268  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||  |    
T  1387 atggataattgttgctaaattcgtgctccaactttgatgatatgttagtatgcatgaattgataataattgtatgattgttggtgaaattacatgttcaa 1288  T
Q  269 atatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||||| ||||||| ||||| ||||||||||||  ||| |||||||||    
T  1287 atatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattt 1240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 1507 - 1430
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||| ||||||||| |||  |  ||||||| ||||||||||||||||||||||||||||||||||||    
T  1507 agcttaggagctaaagtgaagcctaagttgtgattaatctttatctaaggtaagggggttagtctttatcataatcat 1430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 82 - 265
Target Start/End: Original strand, 34372 - 34556
Alignment:
Q  82 ctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaa-atgggttgaaatgaatgaatggataattgt 180  Q
    |||||||||| ||||||||  ||||||||||||||||||||  ||||||||| ||||   ||| ||||| |||||||||| ||||||||||||||||| |    
T  34372 ctaaggtaagagggttagttattatcataatcatgttcatttattgcaatttctcatttgttgtatgaatatgggttgaattgaatgaatggataattat 34471  T
Q  181 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtt 265  Q
    |||||||||||||||| |||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  34472 tgctaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgtt 34556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 41 - 316
Target Start/End: Complemental strand, 48578 - 48303
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatg--ttcattctttgcaatttttcat 138  Q
    |||||||||||| ||||||| |  ||||   ||||| | | |||| |||||||||||||||||  |||||||||||  |   || ||||||||||| | |    
T  48578 ttaggagctaaagtgaagcccaaatttgaattaatcataacctaatgtaagggggttagtcttcttcataatcatgaatgttttgtttgcaattttcctt 48479  T
Q  139 gatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataatt 238  Q
    |  ||| |||||||||||||    |||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||    
T  48478 g--ttgtatgaaatgggttggttggaatgaattgataattgttgctaaattcgtgctccaactgtaatgatatgtttgtatgcatgaattgatgataatt 48381  T
Q  239 gtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||||||||||||| ||||||||||||  ||| ||| ||||||| ||||| ||||||||||||  ||| |||||||||    
T  48380 gtatgattgttggtgaaattacatgttcaaatgtgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattt 48303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 101; Significance: 6e-50; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 168 - 316
Target Start/End: Complemental strand, 19470 - 19322
Alignment:
Q  168 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttg 267  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||      
T  19470 aatggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttca 19371  T
Q  268 aatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    ||||||| ||||||| ||||| ||||||||||||  ||| |||||||||    
T  19370 aatatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattt 19322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 169 - 316
Target Start/End: Complemental strand, 21553 - 21406
Alignment:
Q  169 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 268  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||  |    
T  21553 atggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttcaa 21454  T
Q  269 atatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||||| ||||||| ||||| ||||||||||||  ||| |||||||||    
T  21453 atatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattt 21406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 100; Significance: 2e-49; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 169 - 316
Target Start/End: Complemental strand, 12376 - 12229
Alignment:
Q  169 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 268  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||| |    
T  12376 atggataattgttgctaaattcgtgctctaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaaatacatgtttaa 12277  T
Q  269 atatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    || ||| ||||||| ||||| |||||||||||| |||| |||||||||    
T  12276 atgtgtaaaaatgataagttgtgaaaattgtgctaaattggtgaattt 12229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 12495 - 12418
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||| ||||||||| ||| ||  ||||||  ||||||||||||||||||||||||||||||||||||    
T  12495 agcttaggagctaaagtgaagcctaagttaggattaatctctatctaaggtaagggggttagtctttatcataatcat 12418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 37 - 316
Target Start/End: Original strand, 5944 - 6211
Alignment:
Q  37 aagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttc 136  Q
    ||||||||||||| |||||||||    ||| ||  ||||||  |||||||||||||||||||||||||||||||||||| ||||  |||||||| || ||    
T  5944 aagcttaggagctgaattgaagcaagagttaggattaatctctatctaaggtaagggggttagtctttatcataatcattttca--ctttgcaaattctc 6041  T
Q  137 atgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataa 236  Q
    |    ||| ||||| ||        ||| |  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  6042 aaatgttgtatgaattg--------tgatt--atggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataa 6131  T
Q  237 ttgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||||||||||||||| ||||||||||||  ||||||| ||||| | ||||| | ||||||||||  ||| |||||||||    
T  6132 ttgtatgattgttggtgaaattacatgttcaaatatgtaaaaataataagttgtaaaaattgtgctgaattggtgaattt 6211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 169 - 301
Target Start/End: Original strand, 956 - 1088
Alignment:
Q  169 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 268  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  |    
T  956 atggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaa 1055  T
Q  269 atatgtgaaaatgaaaagttatgaaaattgtgc 301  Q
    |||||| ||||| | ||||| ||||||||||||    
T  1056 atatgtaaaaataataagttgtgaaaattgtgc 1088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 871 - 919
Alignment:
Q  72 taatcttcatctaaggtaagggggttagtctttatcataatcatgttca 120  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  871 taatcttcttctaaggtaagggggttagtctttatcataatcatcttca 919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 168 - 316
Target Start/End: Original strand, 36912 - 37060
Alignment:
Q  168 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttg 267  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| | |||||||| ||||||||||||      
T  36912 aatggataattgttgttaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagcttgttggtgaaattacatgttca 37011  T
Q  268 aatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    ||||||| ||||||| ||||| |||||||||||| |||| |||||||||    
T  37012 aatatgtaaaaatgataagttgtgaaaattgtgctaaattggtgaattt 37060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 36789 - 36869
Alignment:
Q  38 agcttaggagctaaat---tgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||||||    ||||||||| ||| ||  ||||||| || |||||||||||||||||||||||||||||||||    
T  36789 agcttaggagctaaagaagtgaagcctaagttgggattaatctttatttaaggtaagggggttagtctttatcataatcat 36869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 93; Significance: 3e-45; HSPs: 5)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 169 - 301
Target Start/End: Complemental strand, 48861 - 48729
Alignment:
Q  169 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 268  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  |    
T  48861 atggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaa 48762  T
Q  269 atatgtgaaaatgaaaagttatgaaaattgtgc 301  Q
    ||| |  ||||||| ||||| ||||||||||||    
T  48761 ataggaaaaaatgataagttgtgaaaattgtgc 48729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 203 - 316
Target Start/End: Complemental strand, 36323 - 36210
Alignment:
Q  203 tgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgca 302  Q
    ||||| |||||||||||| ||||||||||  || |||||||||||||||| ||||||||| ||   |||||  ||||||| |||||||||| |||||||     
T  36323 tgatgttatgtttgtatgtatgaattgatgttagttgtatgattgttggtgaaattacatattcatatatgcaaaaatgataagttatgaagattgtgct 36224  T
Q  303 aaatgggtgaattt 316  Q
    |||| |||||||||    
T  36223 aaattggtgaattt 36210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 37 - 139
Target Start/End: Original strand, 153878 - 153980
Alignment:
Q  37 aagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttc 136  Q
    ||||||||||||| |||||||||    |||||   |||||||| ||||||||||||||||||||  ||||||||||||||| || | |||||| ||| ||    
T  153878 aagcttaggagctgaattgaagcaagagtttgagttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctc 153977  T
Q  137 atg 139  Q
    |||    
T  153978 atg 153980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 115
Target Start/End: Complemental strand, 48936 - 48903
Alignment:
Q  82 ctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||||||||||||||||||||||    
T  48936 ctaaggtaagggggttagtctttatcataatcat 48903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 151
Target Start/End: Original strand, 61121 - 61191
Alignment:
Q  82 ctaaggtaagggggttagtctttatcataatcat-gttcattctttgcaatttttcatgatttggatgaaa 151  Q
    |||||||||||||||||||||| |||||||||||  ||  || ||||||||||||| || |||| ||||||    
T  61121 ctaaggtaagggggttagtcttcatcataatcataattgtttgtttgcaatttttcttggtttgtatgaaa 61191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 91; Significance: 5e-44; HSPs: 4)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 170 - 316
Target Start/End: Complemental strand, 9111 - 8965
Alignment:
Q  170 tggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaa 269  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  |     
T  9111 tggataattgttgctaaattcgtgctccatctgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaat 9012  T
Q  270 tatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    ||||| ||||||  ||||| ||||||||||||  ||| |||||||||    
T  9011 tatgtaaaaatgtgaagttgtgaaaattgtgctcaattggtgaattt 8965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 172 - 316
Target Start/End: Complemental strand, 148981 - 148837
Alignment:
Q  172 gataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaata 271  Q
    ||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||  ||||    
T  148981 gataattgttgttaaatttgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttcaaata 148882  T
Q  272 tgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    ||| ||||||| ||||| ||||||||||||  ||| |||||||||    
T  148881 tgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattt 148837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 146983 - 146906
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  146983 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 146906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 9237 - 9136
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcat--tctttgcaattttt 135  Q
    ||||||||||||||| ||||||||| |||  |  ||||| | |||||||||||| | ||||||||| |||||||||||  ||||  | ||||||||||||    
T  9237 agcttaggagctaaagtgaagcctaagttgaggttaatcataatctaaggtaagtgtgttagtcttcatcataatcatcatcatcatttttgcaattttt 9138  T
Q  136 ca 137  Q
    ||    
T  9137 ca 9136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 91; Significance: 5e-44; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 169 - 315
Target Start/End: Original strand, 51182 - 51328
Alignment:
Q  169 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 268  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||| |||||||||| ||||||||||||  |    
T  51182 atggataattgttgctaaattcgtgctccaactgtgatgatatatttgtatgcatgaattgatgataattgtaagattgttggtgaaattacatgttcaa 51281  T
Q  269 atatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaatt 315  Q
    ||| || ||||||| ||||| ||||||||||||  ||| ||||||||    
T  51282 ataggtaaaaatgataagttgtgaaaattgtgctcaattggtgaatt 51328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 51063 - 51140
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| |||| |||||||| | ||||||||||||||||||||    
T  51063 agcttaggagctaaattgaagcctaagttgggattaatctttatcttaggtaaggagattagtctttatcataatcat 51140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 38 - 301
Target Start/End: Original strand, 247321 - 247574
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 137  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||  |||||  ||| || ||||||    
T  247321 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcatcatt--ttgtaaattttca 247418  T
Q  138 tgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataat 237  Q
        ||| ||||| |   ||    || || |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||    
T  247419 aatgttgtatgaatt---tt----tgcat-aatggataattgttgctaaattcgtgctccaactgtaatgatatgtttgtatgcatgaattgatgataat 247510  T
Q  238 tgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgc 301  Q
    ||||||||||  ||| ||||| ||||||  |||| |   |||||| ||||| ||||||||||||    
T  247511 tgtatgattgagggtgaaatttcatgttcaaataggaacaaatgataagttgtgaaaattgtgc 247574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 37 - 159
Target Start/End: Original strand, 34029 - 34150
Alignment:
Q  37 aagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttc 136  Q
    |||||||||||||||||||||||    ||||||  |||||||||||||||||||||||||||||||| |||||||||||||||| | |||||| ||| ||    
T  34029 aagcttaggagctaaattgaagcaagagtttgggttaatcttcatctaaggtaagggggttagtcttcatcataatcatgttcaatttttgcattttctc 34128  T
Q  137 atgatttggatgaaatgggttga 159  Q
    ||   ||| ||||||||||||||    
T  34129 at-tgttgtatgaaatgggttga 34150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 89; Significance: 9e-43; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 168 - 316
Target Start/End: Original strand, 123163 - 123311
Alignment:
Q  168 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttg 267  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||      
T  123163 aatggataattgttgctaaattcgtgctccaattgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttca 123262  T
Q  268 aatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||| |   |||||| ||||| ||||||||||||  ||| |||||||||    
T  123263 aataggaacaaatgataagttgtgaaaattgtgctcaattggtgaattt 123311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 123042 - 123119
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| | |||||||||||||||||||||| | |||||||||    
T  123042 agcttaggagctaaattgaagcctaagttgggattaatctttacctaaggtaagggggttagtcttcaccataatcat 123119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 41 - 265
Target Start/End: Original strand, 128053 - 128265
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatga 140  Q
    ||||||| |||| ||||||||| ||| ||  ||||||| |||||||||||||||||||||||||||||||||||| ||||||  |||||| ||||||  |    
T  128053 ttaggagataaaatgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcttcatt--ttgcaaattttcaaaa 128150  T
Q  141 tttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgt 240  Q
     ||| ||||| |  | | |          |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||    
T  128151 gttgtatgaattttgctta----------tggataattgttgctaaattcgtgcttcaactgtgatgatatgtttgtatgcatgaattgatgataattgt 128240  T
Q  241 atgattgttggttaaattacatgtt 265  Q
    | |||||||||| ||||||||||||    
T  128241 aagattgttggtgaaattacatgtt 128265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 203 - 316
Target Start/End: Original strand, 31697 - 31810
Alignment:
Q  203 tgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgca 302  Q
    ||||| |||||||| ||||||||||||||  || |||||||||||||||| ||||||||| ||   |||||  ||||||| |||||||||| ||| |||     
T  31697 tgatgttatgtttgaatgcatgaattgatgttagttgtatgattgttggtgaaattacatattcatatatgcaaaaatgataagttatgaatattatgct 31796  T
Q  303 aaatgggtgaattt 316  Q
     ||| |||||||||    
T  31797 caattggtgaattt 31810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 168 - 265
Target Start/End: Original strand, 533 - 630
Alignment:
Q  168 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtt 265  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  533 aatggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgtt 630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 86; Significance: 5e-41; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 38 - 316
Target Start/End: Complemental strand, 172287 - 172021
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 137  Q
    ||||||||||||||| ||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||  |||||  ||| || ||||||    
T  172287 agcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcatcatt--ttgtaaattttca 172190  T
Q  138 tgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataat 237  Q
        ||| || ||||   ||    ||| |  |||||||| ||||||||||| |||||||||||| |||||||||||||||||| |||||||||| |||||    
T  172189 aatgttgtat-aaat---tt----tgatt--atggataactgttgctaaatacgtgctccaactgtgatgatatgtttgtatggatgaattgatgataat 172100  T
Q  238 tgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||||||||| |||| ||||||||||||  |||| |   |||||| ||||| |||||||||||| |||| |||||||||    
T  172099 tgtatgattgatggtgaaattacatgttcaaataggaacaaatgataagttgtgaaaattgtgctaaattggtgaattt 172021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 38 - 316
Target Start/End: Complemental strand, 177990 - 177724
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 137  Q
    ||||||||||||||| ||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||  |||||  ||| || ||||||    
T  177990 agcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcatcatt--ttgtaaattttca 177893  T
Q  138 tgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataat 237  Q
        ||| || ||||   ||    ||| |  |||||||| ||||||||||| |||||||||||| |||||||||||||||||| |||||||||| |||||    
T  177892 aatgttgtat-aaat---tt----tgatt--atggataactgttgctaaatacgtgctccaactgtgatgatatgtttgtatggatgaattgatgataat 177803  T
Q  238 tgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||||||||| |||| ||||||||||||  |||| |   |||||| ||||| |||||||||||| |||| |||||||||    
T  177802 tgtatgattgatggtgaaattacatgttcaaataggaacaaatgataagttgtgaaaattgtgctaaattggtgaattt 177724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 38 - 316
Target Start/End: Complemental strand, 9260 - 8994
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 137  Q
    ||||||||||||||| ||||||||| ||| ||  ||||||| |||||||||||||||||||||||||||||||||||| ||||||  |||||| ||||||    
T  9260 agcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcttcatt--ttgcaaattttca 9163  T
Q  138 tgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataat 237  Q
      | ||| | ||| |  | | |          |||| ||||||||||||||||||||||||  | ||||| ||||||||||||||||||| ||| |||||    
T  9162 aaagttgtacgaattttgctta----------tggaaaattgttgctaaattcgtgctccatttgtgatgttatgtttgtatgcatgaatcgatgataat 9073  T
Q  238 tgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||| |||||||||| ||||||||||||  | ||||| ||||||  ||||| ||||||||||||  ||| |||||||||    
T  9072 tgtaagattgttggtgaaattacatgttcaattatgtaaaaatgttaagttgtgaaaattgtgctcaattggtgaattt 8994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 168 - 316
Target Start/End: Original strand, 5060 - 5208
Alignment:
Q  168 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttg 267  Q
    ||||||||||||||||||||||||| |||||||| ||| ||||||||||||||| ||||||||| ||||||||| |||||||||| ||| ||||||||      
T  5060 aatggataattgttgctaaattcgtactccaactgtgacgatatgtttgtatgcgtgaattgatgataattgtaagattgttggtgaaagtacatgttca 5159  T
Q  268 aatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    ||||||| ||||||| ||||| ||||||||||||  ||| |||||||||    
T  5160 aatatgtaaaaatgataagttgtgaaaattgtgctcaattggtgaattt 5208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 84; Significance: 8e-40; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 169 - 316
Target Start/End: Complemental strand, 41992 - 41845
Alignment:
Q  169 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttga 268  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||   ||||||||| |||||||||| |  |    
T  41992 atggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatgataattgtcatattgttggtgaaattacatgctcaa 41893  T
Q  269 atatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||||| ||||||| || || ||||||||||||  ||| |||||||||    
T  41892 atatgtaaaaatgataatttgtgaaaattgtgctcaattggtgaattt 41845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 42111 - 42034
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||| |||||||||| ||| ||| ||  |||| || |||||||||||||||||| |||||||||||||||||    
T  42111 agcttaggaggtaaattgaagtctaagttgggattaatatttatctaaggtaagggggttggtctttatcataatcat 42034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 84; Significance: 8e-40; HSPs: 6)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 168 - 315
Target Start/End: Original strand, 89453 - 89600
Alignment:
Q  168 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttg 267  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||      
T  89453 aatggataattgttgctaaattcgtgctccaactgtgatgatatatttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttca 89552  T
Q  268 aatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaatt 315  Q
    |||| |   |||| | ||||| ||||||||||||  ||| ||||||||    
T  89553 aataggaacaaattataagttgtgaaaattgtgctcaattggtgaatt 89600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 89333 - 89410
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||| |||||||||||||| ||| ||  ||||||| |||||||||||||||||||||||| ||||| |||||    
T  89333 agcttaggagttaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtcttcatcatgatcat 89410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 107663 - 107740
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||| |||||||||||||| ||| ||  ||||||| |||||||||||||||||||||||| ||||| |||||    
T  107663 agcttaggagttaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtcttcatcatgatcat 107740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 107783 - 107835
Alignment:
Q  168 aatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatg 220  Q
    ||||||||||| |||||||||||||||||||||| ||||||||| ||||||||    
T  107783 aatggataatttttgctaaattcgtgctccaactgtgatgatatatttgtatg 107835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 130953 - 130880
Alignment:
Q  42 taggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||||||| |||||||||   |||| ||  ||||| || || ||||||||||||||||||||||||||||||||    
T  130953 taggagctgaattgaagcaagggttaggcataatcatcttcaaaggtaagggggttagtctttatcataatcat 130880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 79786 - 79731
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattg 239  Q
    |||||||||| | |||| |||||||||||||||||||||| ||||||| |||||||    
T  79786 aaattcgtgcactaactatgatgatatgtttgtatgcatgaaattgatgataattg 79731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 41 - 262
Target Start/End: Complemental strand, 3578 - 3360
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatga 140  Q
    |||||||||||| ||||||||| |||||   ||||| ||||||||||||||||| ||| ||||  |||||||||||||||||  ||||||||| || |      
T  3578 ttaggagctaaagtgaagcctaagtttgaattaatcatcatctaaggtaagggg-ttattcttcctcataatcatgttcatttattgcaatttctccttg 3480  T
Q  141 tttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgt 240  Q
    ||  | |||||||||||||  ||||| |||||||||||| |||||||||||||||| | || ||||| || ||||||||||||||||| || ||| ||||    
T  3479 ttatg-tgaaatgggttgat-tgaataaatggataattgatgctaaattcgtgctctagctgtgatgttaagtttgtatgcatgaattaatgatatttgt 3382  T
Q  241 atgattgttggttaaattacat 262  Q
    |||||||||||| |||||||||    
T  3381 atgattgttggtgaaattacat 3360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 78; Significance: 3e-36; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 175 - 316
Target Start/End: Complemental strand, 108004 - 107863
Alignment:
Q  175 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgt 274  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||| ||     
T  108004 aattgttactaaattcgtgctccaactgtaatgatatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatgtgc 107905  T
Q  275 gaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
     ||||||| ||||| | ||||||||||  ||| |||||||||    
T  107904 aaaaatgataagttgtaaaaattgtgctcaattggtgaattt 107863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 185 - 316
Target Start/End: Original strand, 64527 - 64663
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatgaatt-----gataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaa 279  Q
    ||||||||||||   || ||||| ||||||| ||||||||||||     ||| || ||||||||||||||||| ||||||||||||| ||||||| ||||    
T  64527 aaattcgtgctcttgctgtgatgttatgtttatatgcatgaattatattgatgatgattgtatgattgttggtgaaattacatgtttaaatatgtaaaaa 64626  T
Q  280 tgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    ||| |||||||||| |||||||  ||| |||||||||    
T  64627 tgataagttatgaatattgtgctcaattggtgaattt 64663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 89863 - 89905
Alignment:
Q  184 taaattcgtgctccaactttgatgatatgtttgtatgcatgaa 226  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  89863 taaattcgtgctccaactatgatgatatgtttgtatgcatgaa 89905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 64395 - 64472
Alignment:
Q  40 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgt 117  Q
    |||||||||| |||||||||    ||||||  |||||||| ||||||||||||||||||||  |||||| ||||||||    
T  64395 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcacaatcatgt 64472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 40 - 266
Target Start/End: Original strand, 55970 - 56196
Alignment:
Q  40 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||| |||||| ||||||| ||||||  ||||| | ||||| ||| |||||||||||||| |||||||||||||||| |  |||||| || ||       
T  55970 cttaggagataaattaaagcctaagtttggattaatcattatctacggtcagggggttagtcttcatcataatcatgttcaattattgcaacttctccct 56069  T
Q  140 atttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattg 239  Q
      ||| ||||||| ||||||   |||||||| ||||||||||| ||||||||||||| |||| ||||| ||| || || ||||||| ||||| |||||||    
T  56070 tgttgtatgaaattggttgattggaatgaatagataattgttgttaaattcgtgctctaactgtgatgttattttcgtgtgcatgatttgatgataattg 56169  T
Q  240 tatgattgttggttaaattacatgttt 266  Q
    ||||||||| | | |||||||||||||    
T  56170 tatgattgtggctgaaattacatgttt 56196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 13325 - 13460
Alignment:
Q  181 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 280  Q
    ||||| ||||||||||  | | ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||| |||||    
T  13325 tgctagattcgtgctcttagtgtgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaat 13424  T
Q  281 gaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    || ||||| ||||||| ||||  ||| |||||||||    
T  13425 gataagttgtgaaaatggtgctcaattggtgaattt 13460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 185 - 316
Target Start/End: Complemental strand, 283 - 152
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaa 284  Q
    ||||||||||||   || ||||| ||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||| ||||||| ||||||| |    
T  283 aaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgatgattgtatgattgttggtgaaattacatgtttaaatatgtaaaaatgata 184  T
Q  285 agttatgaaaattgtgcaaaatgggtgaattt 316  Q
    ||||||| | |||||||  ||| |||||||||    
T  183 agttatgtatattgtgctcaattggtgaattt 152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 416 - 336
Alignment:
Q  37 aagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgt 117  Q
    ||||||||||||| |||||||||    ||||||  |||||||| ||||||||||||||||||||  |||||| ||||||||    
T  416 aagcttaggagctgaattgaagcgagagtttggattaatcttcttctaaggtaagggggttagttattatcaaaatcatgt 336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 316
Target Start/End: Complemental strand, 3366 - 3079
Alignment:
Q  17 cttgaagaatccaattgggaaagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatg 116  Q
    ||||||||||| | | ||| ||||||||||||| |||||||||    |||| |  |||||||| |||||||||||||||||| |  |||||||||| |||    
T  3366 cttgaagaatcaattggggtaagcttaggagctgaattgaagcaagagtttcggttaatcttcttctaaggtaagggggttaattattatcataattatg 3267  T
Q  117 ttcattctttgcaatttttcatgatttggatgaaa-tgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgttt 215  Q
    | || | |||||| ||| |||||  ||| |||||| ||||||||          || | |||| |||||||||||||||||   || ||||| |||||||    
T  3266 tacaat-tttgcattttctcatg--ttgtatgaaaatgggttga----------tgaacaattcttgctaaattcgtgctcttgctgtgatgttatgttt 3180  T
Q  216 gtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaatt 315  Q
    |||| ||||||||||| |||||||||||||||||||| ||||||||||||  | ||||| ||||||  ||||| ||||||||||||  ||| ||||||||    
T  3179 gtatccatgaattgatgataattgtatgattgttggtgaaattacatgttcaattatgtaaaaatgtgaagttgtgaaaattgtgctcaattggtgaatt 3080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 66; Significance: 5e-29; HSPs: 4)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 203 - 316
Target Start/End: Original strand, 9371 - 9484
Alignment:
Q  203 tgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgca 302  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||| ||||||| ||||| ||||||| ||||     
T  9371 tgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgataagttgtgaaaatggtgct 9470  T
Q  303 aaatgggtgaattt 316  Q
     ||| |||||||||    
T  9471 caattggtgaattt 9484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 203 - 316
Target Start/End: Original strand, 16269 - 16382
Alignment:
Q  203 tgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgca 302  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||| ||||||| ||||| ||||||| ||||     
T  16269 tgatgttatgtttgtatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgataagttgtgaaaatggtgct 16368  T
Q  303 aaatgggtgaattt 316  Q
     ||| |||||||||    
T  16369 caattggtgaattt 16382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 9223 - 9299
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgt 117  Q
    |||||||||||| ||||||||| |||  |  ||| | |||||||||||||||||||||||  |||||| ||||||||    
T  9223 ttaggagctaaagtgaagcctaagttaagattaaacatcatctaaggtaagggggttagttattatcacaatcatgt 9299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 16121 - 16197
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgt 117  Q
    |||||||||||| ||||||||| |||  |  ||| | |||||||||||||||||||||||  |||||| ||||||||    
T  16121 ttaggagctaaagtgaagcctaagttaagattaaacatcatctaaggtaagggggttagttattatcacaatcatgt 16197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 38 - 316
Target Start/End: Complemental strand, 272407 - 272141
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 137  Q
    |||| |||||||||| ||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||  |||||  ||| || ||||||    
T  272407 agctcaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcatcatt--ttgtaaattttca 272310  T
Q  138 tgatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataat 237  Q
        ||| || ||||   ||    ||| |  |||||||| | ||||||||| ||| |||||||| | |||||||||||||||| |||||||||| |||||    
T  272309 aatattgtat-aaat---tt----tgatt--atggataaatattgctaaatacgtactccaactgtaatgatatgtttgtatgaatgaattgatgataat 272220  T
Q  238 tgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    |||||||||| |||  ||||||||||||  |||| |   |||||| ||||| |||||||||||| |||| |||||||||    
T  272219 tgtatgattgatggagaaattacatgttcaaataggaacaaatgataagttgtgaaaattgtgctaaattggtgaattt 272141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 204 - 316
Target Start/End: Complemental strand, 43226 - 43114
Alignment:
Q  204 gatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgcaa 303  Q
    |||| ||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||| ||||||  |||||||||| ||||||| |    
T  43226 gatgttatgtttctatgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgttaagttatgaagattgtgcta 43127  T
Q  304 aatgggtgaattt 316  Q
    ||| |||||||||    
T  43126 aattggtgaattt 43114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Complemental strand, 39441 - 39386
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  39441 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 39386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 181 - 316
Target Start/End: Original strand, 1304 - 1439
Alignment:
Q  181 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaat 280  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||||  || |||||||||||||||| ||||||||||||   |||||  |||||    
T  1304 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgttagttgtatgattgttggtgaaattacatgttcatatatgcaaaaat 1403  T
Q  281 gaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
    || |||||||||| |||||||  ||| |||||||||    
T  1404 gataagttatgaatattgtgctcaattggtgaattt 1439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 115
Target Start/End: Original strand, 835 - 910
Alignment:
Q  40 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  835 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 115
Target Start/End: Original strand, 9839 - 9914
Alignment:
Q  40 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  9839 cttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatcat 9914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 203 - 316
Target Start/End: Original strand, 14083 - 14196
Alignment:
Q  203 tgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtgca 302  Q
    ||||| ||||| ||||||||||||||||| |||||| |||||||||| || ||||||||||||  ||||||| ||||||| |||||||||| |||||||     
T  14083 tgatgttatgtctgtatgcatgaattgatgataattatatgattgttagtgaaattacatgttgaaatatgtaaaaatgataagttatgaagattgtgct 14182  T
Q  303 aaatgggtgaattt 316  Q
     ||| |||||||||    
T  14183 caattggtgaattt 14196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 175 - 316
Target Start/End: Original strand, 21110 - 21251
Alignment:
Q  175 aattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgt 274  Q
    |||| |||||||||||||||||    | ||||| ||||||||||| ||| ||||||| |||||| |||||||||| || ||||||||||||  |||||||    
T  21110 aattcttgctaaattcgtgctcttgttgtgatgttatgtttgtatccattaattgatgataattatatgattgttagtgaaattacatgttcaaatatgt 21209  T
Q  275 gaaaatgaaaagttatgaaaattgtgcaaaatgggtgaattt 316  Q
     ||||||| |||||||||| |||| ||  ||| |||||||||    
T  21210 aaaaatgataagttatgaagattgagctcaattggtgaattt 21251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 219 - 300
Target Start/End: Original strand, 5254 - 5335
Alignment:
Q  219 tgcatgaattgataataattgtatgattgttggttaaattacatgtttgaatatgtgaaaatgaaaagttatgaaaattgtg 300  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||| ||||||| |||||||||||||||||    
T  5254 tgcatgaattgatgataattgtatgattgttggtgaaattacatgttcaaatatgtaaaaatgataagttatgaaaattgtg 5335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 102923 - 102963
Alignment:
Q  186 aattcgtgctccaactttgatgatatgtttgtatgcatgaa 226  Q
    |||||||||||||| | |||||||||||||| |||||||||    
T  102923 aattcgtgctccaattatgatgatatgtttgaatgcatgaa 102963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 37 - 266
Target Start/End: Original strand, 10210 - 10428
Alignment:
Q  37 aagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttc 136  Q
    ||||||| |||||||| ||||||||| ||| ||  ||||| |||||||||||||||||||| |||||  ||||||||||||||| | |||||| ||| ||    
T  10210 aagcttatgagctaaagtgaagcctaagttggggttaatcatcatctaaggtaagggggtttgtcttcttcataatcatgttcaatttttgcattttctc 10309  T
Q  137 atgatttggatg-aaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataata 235  Q
    |||  ||| ||| ||||||||||          ||| ||||||||||||||||||||||||   || ||||||||| ||  | ||||||||||||| ||     
T  10310 atg--ttgtatgaaaatgggttg----------atgaataattgttgctaaattcgtgctcttgctgtgatgatattttcttgtgcatgaattgatgatt 10397  T
Q  236 attgtatgattgttggttaaattacatgttt 266  Q
    || ||||| |||| ||| |||||||||||||    
T  10398 atggtatgtttgtgggtgaaattacatgttt 10428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 55; Significance: 2e-22; HSPs: 3)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 38 - 266
Target Start/End: Complemental strand, 45415 - 45197
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 137  Q
    |||||||||||| |||||||||||| ||||||  ||| | | |||||||||||||||||||||||| |||||||||||||||| |  ||||||||| |||    
T  45415 agcttaggagcttaattgaagcctaagtttggattaaccattatctaaggtaagggggttagtcttcatcataatcatgttcaattattgcaatttctca 45316  T
Q  138 tgatttggatg-aaatgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataataa 236  Q
    |   ||| ||| ||||||||||          ||| |||||||||| ||||||||||| |    | ||||| ||| ||  | ||||||||||||| ||||    
T  45315 t-tgttgtatgaaaatgggttg----------atgaataattgttgttaaattcgtgcccttgttgtgatgctattttgatgtgcatgaattgatgataa 45227  T
Q  237 ttgtatgattgttggttaaattacatgttt 266  Q
    |||||||||||| ||| |||||||||||||    
T  45226 ttgtatgattgtgggtgaaattacatgttt 45197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 38 - 138
Target Start/End: Complemental strand, 54801 - 54701
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttca 137  Q
    |||||||||||| ||||||||| || ||||||  ||| | | ||||||||||||| |||||||||| |||||||||||||||| |  ||||||||| |||    
T  54801 agcttaggagcttaattgaagcttaagtttggattaaccattatctaaggtaaggtggttagtcttcatcataatcatgttcaattattgcaatttctca 54702  T
Q  138 t 138  Q
    |    
T  54701 t 54701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 266
Target Start/End: Complemental strand, 54630 - 54583
Alignment:
Q  219 tgcatgaattgataataattgtatgattgttggttaaattacatgttt 266  Q
    ||||||||||||| |||||||||||||||| ||| ||||| |||||||    
T  54630 tgcatgaattgatgataattgtatgattgtgggtgaaattgcatgttt 54583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 55; Significance: 2e-22; HSPs: 5)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 108029 - 108107
Alignment:
Q  37 aagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||| |||||||||||| ||| |   ||||||||||||||||||||||||||||||||||||||||||||    
T  108029 aagcttaggagctgaattgaagcctaagttggaattaatcttcatctaaggtaagggggttagtctttatcataatcat 108107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 55981 - 55904
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||||||||||||||||  || ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  55981 agcttaggagctaaattgaagcctaaattgggattaatctttatctaaggtaagggggttagtctttatcataatcat 55904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 82 - 196
Target Start/End: Original strand, 13266 - 13379
Alignment:
Q  82 ctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatgatttggatgaaatgggttgaaatgaatgaatggataattgtt 181  Q
    |||||||||||||||||||  | |||||||||||||||| | |||||| ||| |||||  ||| ||||||||||||||   |||||||| ||||||||||    
T  13266 ctaaggtaagggggttagttatcatcataatcatgttcaatttttgcattttctcatg--ttgtatgaaatgggttgattggaatgaattgataattgtt 13363  T
Q  182 gct-aaattcgtgctc 196  Q
    | | ||||||||||||    
T  13364 gttaaaattcgtgctc 13379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 93773 - 93814
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa 226  Q
    ||||||||||||||| | ||||||||||| ||||||||||||    
T  93773 aaattcgtgctccaattatgatgatatgtatgtatgcatgaa 93814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 104623 - 104691
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgca-tgaattgataataattgtatgattgttggt 252  Q
    |||||| ||||| |||| |||||||||||||||||||| | ||||||| ||||||| ||  ||||||||    
T  104623 aaattcatgctctaactatgatgatatgtttgtatgcattaaattgatgataattgaattgttgttggt 104691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 13240 - 13317
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||| ||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  13240 agcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 13317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 193352 - 193429
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||| ||||||||| ||| ||  |||||||||| |||||||||||||||||||||||||||||||||    
T  193352 agcttaggagctaaagtgaagcctaagttgggattaatcttcatttaaggtaagggggttagtctttatcataatcat 193429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 38 - 114
Target Start/End: Complemental strand, 25608 - 25532
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatca 114  Q
    ||||||||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||||| ||||||||||    
T  25608 agcttaggagctaaattgaagcctaagtttgggttaatccttatctaaggtaagggggttagtcttcatcataatca 25532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 115
Target Start/End: Original strand, 17261 - 17336
Alignment:
Q  40 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||||||||||| ||| ||  |||||| ||||||||||||| |||||||||||||||||||||||    
T  17261 cttaggagctaaattgaagcctaagttgggattaatctccatctaaggtaagcgggttagtctttatcataatcat 17336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 37 - 139
Target Start/End: Original strand, 1446 - 1548
Alignment:
Q  37 aagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttc 136  Q
    ||||||||||||| |||||||||   |||||||  |||||||| ||||||||||||||||||||  |||||||||||||||||| | |||||| ||| ||    
T  1446 aagcttaggagctgaattgaagcaagggtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgttcaatttttgcattttctc 1545  T
Q  137 atg 139  Q
    |||    
T  1546 atg 1548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 40 - 114
Target Start/End: Complemental strand, 413 - 339
Alignment:
Q  40 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatca 114  Q
    ||||||||||||||||||||||| ||||||  ||||| | |||||||||||||||||||||||| ||||||||||    
T  413 cttaggagctaaattgaagcctaagtttggattaatccttatctaaggtaagggggttagtcttcatcataatca 339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 6398 - 6475
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||||||||||||| ||| ||  || || | ||||||||||||||||||||||||||||||||||||    
T  6398 agcttaggagctaaattgaagcctaagttgggattattccttatctaaggtaagggggttagtctttatcataatcat 6475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 57347 - 57424
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||| ||||||| ||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  57347 agcttagtagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 57424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 70307 - 70361
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataatt 238  Q
    |||||||| |||||||| |||||||||||||||||||||| ||||||| ||||||    
T  70307 aaattcgtactccaactatgatgatatgtttgtatgcatgaaattgatgataatt 70361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 300
Target Start/End: Complemental strand, 4107 - 3854
Alignment:
Q  37 aagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttc 136  Q
    ||||||||||||| |||||||||    ||| ||  ||||| || |||||||||||||| |||||  ||||||||||||||| || | |||||| ||| ||    
T  4107 aagcttaggagctgaattgaagcaagagttagggttaatcatcttctaaggtaaggggtttagttattatcataatcatgtacaatttttgcattttctc 4008  T
Q  137 atgatttggatgaaa-tgggttgaaatgaatgaatggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgataata 235  Q
    |||  ||| |||||| ||||||||          || | |||| |||||||||||||||||    | ||||| ||| ||  | ||||||||||||| |||    
T  4007 atg--ttgtatgaaaatgggttga----------tgaacaattcttgctaaattcgtgctcttgttgtgatgctattttcttgtgcatgaattgatgata 3920  T
Q  236 attgtatgattgttggttaaattacatgtttgaatatgt-gaaaatgaaaagttatgaaaattgtg 300  Q
    ||||||||||||||||| ||||||||||||  |||||||  ||||||| |||||||| ||||||||    
T  3919 attgtatgattgttggtgaaattacatgttcaaatatgtaaaaaatgataagttatggaaattgtg 3854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 34266 - 34340
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||| ||||||||| ||||||  ||||| | |||||||||||||||||||||||| |||||||||||    
T  34266 ttaggagctaaaatgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcat 34340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 38 - 115
Target Start/End: Original strand, 12373 - 12450
Alignment:
Q  38 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||||||||||||||||| ||| ||| ||   |||||| ||||||||||||||||||||| ||||||||||||||    
T  12373 agcttaggagctaaattgaagtctaagttgggatgaatctttatctaaggtaagggggttagtttttatcataatcat 12450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 95372 - 95297
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatg 116  Q
    |||||||||||| ||||||||||||||||  ||||| | | ||||||||||||||||||||||  |||||||||||    
T  95372 ttaggagctaaagtgaagcctaggtttggattaatcattacctaaggtaagggggttagtcttcttcataatcatg 95297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 115
Target Start/End: Complemental strand, 18100 - 18026
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    ||||||| |||| ||||||||| ||||||  ||||| | |||||||||||||||||||||||| |||||||||||    
T  18100 ttaggagttaaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcat 18026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 187
Target Start/End: Original strand, 49710 - 49856
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatg--ttcattctttgcaatttttcat 138  Q
    |||||||||||| ||||||||| ||||||  ||||| | | ||||||||||||||||||||||  |||||||||||  |   || ||||||||||| | |    
T  49710 ttaggagctaaagtgaagcctaagtttggattaatcattacctaaggtaagggggttagtcttcttcataatcatgattgttttgtttgcaattttcctt 49809  T
Q  139 gatttggatgaaatgggttgaaatgaatgaatggataattgttgctaaa 187  Q
    |  ||| ||||||||||||||   |||||||| ||||||||||| ||||    
T  49810 g--ttgtatgaaatgggttgattggaatgaattgataattgttgttaaa 49856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 5623 - 5548
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatg 116  Q
    |||||||||||| ||||||| | ||||||  ||||| | | |||||||||||||||||||||| ||||||||||||    
T  5623 ttaggagctaaaatgaagcccaagtttggattaatcattacctaaggtaagggggttagtcttcatcataatcatg 5548  T

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Target: scaffold0335 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 5434 - 5508
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||| ||||||||| | ||||  ||||| | | |||||||||||||||||||||| |||||||||||    
T  5434 ttaggagctaaagtgaagcctaagattggattaatcattacctaaggtaagggggttagtcttcatcataatcat 5508  T

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Target: scaffold0123 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 265
Target Start/End: Complemental strand, 8257 - 8176
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattgtatgattgttggttaaattacatgtt 265  Q
    |||||||||||| |||| |||||||||||||||||||||| ||||||| ||||||| ||  |||||||| || || ||||||    
T  8257 aaattcgtgctctaactatgatgatatgtttgtatgcatgaaattgatgataattgaattgttgttggtgaatttgcatgtt 8176  T

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Target: scaffold1500 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 1420 - 1487
Alignment:
Q  72 taatcttcatctaaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||| ||||||||||||||||||||  ||||||||||||||| || | |||||| ||| |||||    
T  1420 taatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatg 1487  T

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Target: scaffold0383 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 117
Target Start/End: Complemental strand, 2773 - 2698
Alignment:
Q  42 taggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcatgt 117  Q
    |||||||| |||||||||    ||||||  |||||||| ||||||||||||||||||||  |||||||||||||||    
T  2773 taggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgt 2698  T

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Target: scaffold0303 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 4304 - 4378
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||| ||||||  | ||||||  ||||| | | |||||||||||||||||| |||||||||||||||    
T  4304 ttaggagctaaagtgaagcaaaagtttggattaatcattacctaaggtaagggggttagactttatcataatcat 4378  T

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Target: scaffold0183 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 114
Target Start/End: Complemental strand, 6979 - 6905
Alignment:
Q  40 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatca 114  Q
    |||||||||| |||||||||    ||||||  |||||||| ||||||||||||||||||||  ||||||||||||    
T  6979 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatca 6905  T

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Target: scaffold0456 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 1546 - 1587
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa 226  Q
    |||||||||||| |||| ||||||||||||||||||||||||    
T  1546 aaattcgtgctctaactatgatgatatgtttgtatgcatgaa 1587  T

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Target: scaffold0456; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 8691 - 8732
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatgaa 226  Q
    |||||||||||| |||| ||||||||||||||||||||||||    
T  8691 aaattcgtgctctaactatgatgatatgtttgtatgcatgaa 8732  T

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Target: scaffold0034 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 115
Target Start/End: Complemental strand, 80219 - 80187
Alignment:
Q  83 taaggtaagggggttagtctttatcataatcat 115  Q
    |||||||||||||||||||||||||||||||||    
T  80219 taaggtaagggggttagtctttatcataatcat 80187  T

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Target: scaffold0409 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 263
Target Start/End: Original strand, 1348 - 1427
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcat-gaattgataataattgtatgattgttggttaaattacatg 263  Q
    |||||||||||| |||| |||||||||||||||||||||  ||||| | ||||||| ||  |||||||| ||||| ||||    
T  1348 aaattcgtgctctaactatgatgatatgtttgtatgcataaaattggtgataattggattgttgttggtgaaattgcatg 1427  T

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Target: scaffold0409; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 263
Target Start/End: Original strand, 9603 - 9682
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcat-gaattgataataattgtatgattgttggttaaattacatg 263  Q
    |||||||||||| |||| |||||||||||||||||||||  ||||| | ||||||| ||  |||||||| ||||| ||||    
T  9603 aaattcgtgctctaactatgatgatatgtttgtatgcataaaattggtgataattggattgttgttggtgaaattgcatg 9682  T

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Target: scaffold0367 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 17207 - 17278
Alignment:
Q  81 tctaaggtaagggggttagtctttatcataatcat-gttcattctttgcaatttttcatgatttggatgaaa 151  Q
    ||||||||||||||||||||||| |||||||||||  ||  || ||||||||||||| || |||| ||||||    
T  17207 tctaaggtaagggggttagtcttcatcataatcataattgtttgtttgcaatttttcttggtttgtatgaaa 17278  T

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Target: scaffold0213 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Complemental strand, 29500 - 29445
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  29500 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 29445  T

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Target: scaffold0191 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 72 - 119
Target Start/End: Original strand, 7362 - 7409
Alignment:
Q  72 taatcttcatctaaggtaagggggttagtctttatcataatcatgttc 119  Q
    |||||||| || |||||||||||||||||  |||||||||||||||||    
T  7362 taatcttcttcaaaggtaagggggttagttattatcataatcatgttc 7409  T

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Target: scaffold0107 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 139
Target Start/End: Complemental strand, 31647 - 31592
Alignment:
Q  84 aaggtaagggggttagtctttatcataatcatgttcattctttgcaatttttcatg 139  Q
    |||||||||||||||||  ||||||||||||||| || |||||||| ||| |||||    
T  31647 aaggtaagggggttagttattatcataatcatgtacaatctttgcattttctcatg 31592  T

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Target: scaffold0389 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 10908 - 10854
Alignment:
Q  186 aattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattg 239  Q
    ||||||||||| | || |||||||||||||||||||||| ||||||| |||||||    
T  10908 aattcgtgctctatctatgatgatatgtttgtatgcatgaaattgatgataattg 10854  T

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Target: scaffold0151 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 22422 - 22476
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataatt 238  Q
    |||||||||||| || | |||||||||||||||||||||| ||||||| ||||||    
T  22422 aaattcgtgctctaaatatgatgatatgtttgtatgcatgaaattgatgataatt 22476  T

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Target: scaffold0700 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 265
Target Start/End: Complemental strand, 2772 - 2691
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattgtatgattgttggttaaattacatgtt 265  Q
    |||||||||||| || | |||||||||||||| ||||||| ||||| | ||||||| ||  |||||||| ||||| ||||||    
T  2772 aaattcgtgctctaattatgatgatatgtttggatgcatgaaattggtgataattgaattgttgttggtgaaattgcatgtt 2691  T

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Target: scaffold0516 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 12002 - 12075
Alignment:
Q  41 ttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatca 114  Q
    |||||||||||| ||||||||| |||     ||| | |||||||||||||||||||||||  ||||||||||||    
T  12002 ttaggagctaaagtgaagcctaagttaaaattaaacatcatctaaggtaagggggttagttattatcataatca 12075  T

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Target: scaffold0138 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 265
Target Start/End: Original strand, 22429 - 22510
Alignment:
Q  185 aaattcgtgctccaactttgatgatatgtttgtatgcatg-aattgataataattgtatgattgttggttaaattacatgtt 265  Q
    |||||||||||| ||||  ||| ||||||||||||||||| ||||||| ||||||| ||  |||||||| || || ||||||    
T  22429 aaattcgtgctctaactaggataatatgtttgtatgcatgaaattgatgataattgaattgttgttggtgaatttgcatgtt 22510  T

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Target: scaffold0243 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 265
Target Start/End: Original strand, 2317 - 2397
Alignment:
Q  186 aattcgtgctccaactttgatgatatgtttgtatgcatgaa-ttgataataattgtatgattgttggttaaattacatgtt 265  Q
    |||||||||||||| | ||||| |||||||| ||||||||| ||| | ||||||| ||  |||||||| ||||| ||||||    
T  2317 aattcgtgctccaattatgatgttatgtttgaatgcatgaagttgttgataattgaattgttgttggtgaaatttcatgtt 2397  T

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Target: scaffold0013 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 154305 - 154365
Alignment:
Q  40 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagt 100  Q
    |||||||||| |||||||||    ||||||  |||||||| ||||||||||||||||||||    
T  154305 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagt 154365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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