View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0714_low_34 (Length: 335)

Name: NF0714_low_34
Description: NF0714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0714_low_34
NF0714_low_34
[»] scaffold0411 (1 HSPs)
scaffold0411 (1-200)||(12383-12581)
[»] chr3 (88 HSPs)
chr3 (1-199)||(52920578-52920774)
chr3 (3-208)||(20646330-20646533)
chr3 (1-202)||(15903372-15903571)
chr3 (5-208)||(13948513-13948714)
chr3 (1-200)||(6090905-6091102)
chr3 (3-196)||(31303561-31303755)
chr3 (33-208)||(41495179-41495352)
chr3 (1-208)||(49642560-49642748)
chr3 (1-202)||(14392793-14392990)
chr3 (1-199)||(28582279-28582476)
chr3 (1-202)||(29951226-29951424)
chr3 (1-202)||(30000380-30000578)
chr3 (1-199)||(18121411-18121608)
chr3 (1-161)||(25398101-25398259)
chr3 (1-208)||(12962882-12963071)
chr3 (38-202)||(22803888-22804049)
chr3 (54-200)||(16199601-16199744)
chr3 (61-199)||(13824265-13824403)
chr3 (1-199)||(14969500-14969683)
chr3 (67-202)||(37467541-37467674)
chr3 (1-64)||(16658541-16658604)
chr3 (1-128)||(49666276-49666401)
chr3 (1-94)||(2785238-2785330)
chr3 (70-193)||(11223789-11223910)
chr3 (69-202)||(17238741-17238871)
chr3 (15-128)||(46349705-46349818)
chr3 (83-193)||(47405247-47405356)
chr3 (1-64)||(2561361-2561424)
chr3 (18-94)||(14955615-14955692)
chr3 (83-196)||(16658434-16658551)
chr3 (1-64)||(20627356-20627417)
chr3 (120-202)||(16032771-16032852)
chr3 (1-78)||(49553400-49553475)
chr3 (1-116)||(21636551-21636665)
chr3 (137-193)||(11908761-11908817)
chr3 (15-93)||(21641051-21641130)
chr3 (1-64)||(38177566-38177629)
chr3 (19-168)||(1727846-1727995)
chr3 (68-199)||(2561414-2561549)
chr3 (54-116)||(12388729-12388791)
chr3 (1-51)||(12726166-12726216)
chr3 (1-101)||(21605550-21605649)
chr3 (119-199)||(38177479-38177558)
chr3 (15-64)||(47207892-47207941)
chr3 (15-78)||(11869253-11869317)
chr3 (137-193)||(12752397-12752453)
chr3 (1-64)||(17238847-17238908)
chr3 (137-193)||(20627275-20627330)
chr3 (15-90)||(33583416-33583492)
chr3 (15-90)||(33598036-33598112)
chr3 (1-64)||(37467506-37467567)
chr3 (137-193)||(46349623-46349679)
chr3 (119-197)||(49553280-49553359)
chr3 (73-193)||(53056523-53056642)
chr3 (137-200)||(19249202-19249264)
chr3 (69-128)||(40851184-40851242)
chr3 (144-199)||(24775288-24775345)
chr3 (137-191)||(26417489-26417542)
chr3 (115-193)||(47207996-47208073)
chr3 (15-128)||(50300387-50300500)
chr3 (137-199)||(50300526-50300587)
chr3 (15-64)||(47405346-47405395)
chr3 (15-91)||(51341189-51341266)
chr3 (140-200)||(12726052-12726111)
chr3 (137-193)||(13148586-13148642)
chr3 (68-128)||(18142643-18142702)
chr3 (1-64)||(18142677-18142738)
chr3 (137-201)||(20725400-20725463)
chr3 (137-193)||(29855734-29855790)
chr3 (68-128)||(30054102-30054161)
chr3 (16-64)||(40800060-40800108)
chr3 (68-128)||(46796253-46796312)
chr3 (137-193)||(51341357-51341413)
chr3 (161-193)||(51988803-51988835)
chr3 (3-64)||(19888869-19888928)
chr3 (137-187)||(22151566-22151616)
chr3 (144-193)||(11869401-11869449)
chr3 (137-198)||(12388667-12388727)
chr3 (148-197)||(14073003-14073051)
chr3 (67-128)||(14955680-14955740)
chr3 (120-193)||(40800117-40800189)
chr3 (148-200)||(8728815-8728866)
chr3 (148-200)||(9080702-9080753)
chr3 (137-193)||(14955766-14955822)
chr3 (149-193)||(22141063-22141107)
chr3 (68-128)||(33583485-33583544)
chr3 (68-128)||(33598105-33598164)
chr3 (1-64)||(46796302-46796363)
[»] chr1 (73 HSPs)
chr1 (1-199)||(22599892-22600089)
chr1 (1-208)||(20954156-20954380)
chr1 (1-197)||(23036230-23036434)
chr1 (1-199)||(2268701-2268897)
chr1 (1-199)||(35401982-35402188)
chr1 (1-208)||(33256054-33256258)
chr1 (1-208)||(33276226-33276430)
chr1 (68-199)||(16235022-16235152)
chr1 (1-200)||(22154030-22154244)
chr1 (1-208)||(38282739-38282961)
chr1 (1-208)||(19717697-19717883)
chr1 (1-202)||(48704377-48704572)
chr1 (104-199)||(36134449-36134543)
chr1 (56-199)||(21191591-21191731)
chr1 (115-208)||(1900619-1900711)
chr1 (1-200)||(7309991-7310171)
chr1 (1-64)||(28492248-28492311)
chr1 (120-202)||(1578124-1578205)
chr1 (1-128)||(21702986-21703111)
chr1 (38-173)||(12284648-12284782)
chr1 (38-200)||(17024692-17024852)
chr1 (15-193)||(19170061-19170245)
chr1 (1-199)||(32785663-32785845)
chr1 (15-128)||(48570014-48570127)
chr1 (1-64)||(1900518-1900581)
chr1 (67-202)||(10757645-10757776)
chr1 (54-200)||(12613505-12613649)
chr1 (15-190)||(22427078-22427252)
chr1 (80-208)||(30893314-30893441)
chr1 (137-193)||(25448249-25448305)
chr1 (124-208)||(28492137-28492220)
chr1 (1-64)||(29215970-29216031)
chr1 (1-115)||(46089153-46089266)
chr1 (137-200)||(18896298-18896360)
chr1 (2-78)||(2834864-2834938)
chr1 (1-128)||(10251149-10251274)
chr1 (137-193)||(2327124-2327180)
chr1 (115-199)||(2834976-2835060)
chr1 (15-93)||(17371211-17371290)
chr1 (1-64)||(26701973-26702036)
chr1 (1-78)||(1578040-1578115)
chr1 (1-93)||(2327255-2327346)
chr1 (1-51)||(10757595-10757645)
chr1 (1-51)||(12284596-12284646)
chr1 (1-62)||(44821393-44821452)
chr1 (68-193)||(2267296-2267419)
chr1 (137-193)||(23065253-23065310)
chr1 (1-64)||(16235142-16235203)
chr1 (18-168)||(21204672-21204823)
chr1 (161-193)||(22019680-22019712)
chr1 (161-193)||(22655822-22655854)
chr1 (137-193)||(26547961-26548017)
chr1 (1-64)||(30893266-30893327)
chr1 (18-96)||(22464621-22464700)
chr1 (137-191)||(28380313-28380368)
chr1 (68-161)||(21029019-21029110)
chr1 (115-193)||(22464508-22464585)
chr1 (163-193)||(52350424-52350454)
chr1 (68-101)||(21984811-21984844)
chr1 (67-96)||(34255341-34255370)
chr1 (144-193)||(39200741-39200789)
chr1 (68-101)||(42284842-42284875)
chr1 (68-128)||(2327206-2327265)
chr1 (161-193)||(19038336-19038368)
chr1 (148-200)||(20109685-20109736)
chr1 (69-101)||(21134991-21135023)
chr1 (68-128)||(23024984-23025043)
chr1 (68-128)||(25448331-25448390)
chr1 (70-200)||(26701853-26701981)
chr1 (137-193)||(29216091-29216146)
chr1 (1-48)||(30572369-30572414)
chr1 (1-60)||(36134362-36134419)
chr1 (68-116)||(44821353-44821401)
[»] scaffold0861 (1 HSPs)
scaffold0861 (1-208)||(4679-4884)
[»] scaffold0035 (2 HSPs)
scaffold0035 (1-202)||(19212-19409)
scaffold0035 (1-94)||(99053-99145)
[»] chr4 (72 HSPs)
chr4 (1-199)||(45833562-45833759)
chr4 (1-208)||(14833564-14833765)
chr4 (1-199)||(14604655-14604849)
chr4 (1-202)||(16632608-16632805)
chr4 (5-208)||(12601273-12601473)
chr4 (1-200)||(37435268-37435478)
chr4 (67-208)||(9141095-9141235)
chr4 (1-200)||(12810941-12811121)
chr4 (4-208)||(29680297-29680484)
chr4 (1-117)||(40846267-40846383)
chr4 (1-200)||(6641851-6642045)
chr4 (82-202)||(19620837-19620955)
chr4 (1-74)||(23123599-23123672)
chr4 (38-199)||(56034762-56034922)
chr4 (3-64)||(19911760-19911821)
chr4 (115-208)||(3395906-3395998)
chr4 (1-199)||(10073102-10073286)
chr4 (1-64)||(3483889-3483952)
chr4 (1-64)||(14904236-14904299)
chr4 (1-64)||(19884869-19884932)
chr4 (1-71)||(23750688-23750758)
chr4 (137-208)||(14904058-14904128)
chr4 (18-94)||(17247426-17247503)
chr4 (1-64)||(6517653-6517714)
chr4 (137-200)||(17540721-17540783)
chr4 (8-115)||(22089762-22089869)
chr4 (1-82)||(3395758-3395840)
chr4 (120-198)||(55380528-55380605)
chr4 (68-193)||(29121608-29121732)
chr4 (1-64)||(10693019-10693080)
chr4 (1-64)||(10906785-10906846)
chr4 (1-64)||(54680096-54680157)
chr4 (1-87)||(15139395-15139482)
chr4 (83-193)||(13575898-13576006)
chr4 (83-193)||(54680147-54680255)
chr4 (15-64)||(13575996-13576045)
chr4 (1-64)||(413170-413231)
chr4 (1-64)||(14571192-14571253)
chr4 (68-128)||(14571243-14571302)
chr4 (1-64)||(55380458-55380519)
chr4 (140-202)||(23750751-23750811)
chr4 (158-193)||(33378758-33378793)
chr4 (137-199)||(3497936-3497997)
chr4 (68-125)||(10693070-10693126)
chr4 (68-125)||(10906836-10906892)
chr4 (68-168)||(3105230-3105329)
chr4 (1-60)||(3793291-3793348)
chr4 (168-208)||(19911678-19911718)
chr4 (137-201)||(41114499-41114562)
chr4 (69-128)||(8105889-8105947)
chr4 (18-128)||(40860841-40860951)
chr4 (137-179)||(8105973-8106015)
chr4 (137-191)||(17787793-17787846)
chr4 (163-193)||(17993517-17993547)
chr4 (159-193)||(22675304-22675338)
chr4 (137-202)||(40846385-40846450)
chr4 (68-101)||(6517704-6517737)
chr4 (144-193)||(10693162-10693211)
chr4 (144-193)||(10906928-10906977)
chr4 (147-200)||(11901528-11901580)
chr4 (68-101)||(17398543-17398576)
chr4 (49-78)||(19620944-19620973)
chr4 (68-101)||(22191057-22191090)
chr4 (15-92)||(55731959-55732036)
chr4 (68-96)||(413221-413249)
chr4 (157-193)||(413331-413367)
chr4 (149-193)||(17247574-17247618)
chr4 (19-101)||(17700655-17700736)
chr4 (1-33)||(19620972-19621004)
chr4 (68-128)||(20977648-20977707)
chr4 (161-193)||(36209799-36209831)
chr4 (1-33)||(56034742-56034774)
[»] chr8 (78 HSPs)
chr8 (4-202)||(29693484-29693682)
chr8 (1-202)||(39693701-39693900)
chr8 (1-208)||(17914625-17914830)
chr8 (1-211)||(20382173-20382379)
chr8 (1-208)||(17267639-17267842)
chr8 (1-200)||(19943403-19943600)
chr8 (1-208)||(17525510-17525713)
chr8 (1-208)||(16681086-16681288)
chr8 (1-200)||(24646504-24646700)
chr8 (38-208)||(20255348-20255516)
chr8 (1-200)||(22745653-22745833)
chr8 (1-200)||(33083023-33083220)
chr8 (1-208)||(19156362-19156553)
chr8 (3-200)||(17441611-17441791)
chr8 (1-208)||(18120904-18121094)
chr8 (1-92)||(16207472-16207563)
chr8 (1-200)||(19707671-19707865)
chr8 (1-128)||(22673944-22674069)
chr8 (1-200)||(16189150-16189362)
chr8 (15-177)||(17797600-17797763)
chr8 (1-199)||(21933049-21933263)
chr8 (8-199)||(23263389-23263589)
chr8 (1-78)||(18321067-18321144)
chr8 (1-128)||(3598206-3598331)
chr8 (67-179)||(18680031-18680140)
chr8 (1-94)||(36105361-36105453)
chr8 (1-87)||(17701911-17701997)
chr8 (1-128)||(43639940-43640065)
chr8 (68-202)||(602521-602652)
chr8 (137-199)||(16207556-16207617)
chr8 (120-202)||(18320977-18321058)
chr8 (1-91)||(22663282-22663371)
chr8 (7-62)||(12757687-12757742)
chr8 (1-94)||(15335981-15336073)
chr8 (1-94)||(15425046-15425138)
chr8 (1-94)||(15516350-15516442)
chr8 (115-202)||(17702005-17702091)
chr8 (16-128)||(40845248-40845360)
chr8 (137-193)||(1237969-1238025)
chr8 (137-193)||(21541289-21541345)
chr8 (15-64)||(23185150-23185199)
chr8 (137-200)||(22461418-22461480)
chr8 (15-96)||(9320748-9320830)
chr8 (115-193)||(30421237-30421314)
chr8 (21-101)||(18730861-18730939)
chr8 (15-93)||(21541125-21541201)
chr8 (67-128)||(36105441-36105501)
chr8 (22-101)||(43774053-43774134)
chr8 (68-193)||(45538249-45538373)
chr8 (53-184)||(2811037-2811168)
chr8 (137-193)||(9320887-9320943)
chr8 (68-128)||(13430511-13430570)
chr8 (68-128)||(14989335-14989394)
chr8 (149-193)||(15335836-15335880)
chr8 (149-193)||(15424901-15424945)
chr8 (149-193)||(15516205-15516249)
chr8 (161-193)||(17518840-17518872)
chr8 (68-116)||(18151551-18151599)
chr8 (1-64)||(18151589-18151650)
chr8 (68-128)||(21288611-21288670)
chr8 (137-193)||(24832849-24832905)
chr8 (137-193)||(28903782-28903838)
chr8 (137-193)||(40003508-40003564)
chr8 (137-200)||(43645132-43645196)
chr8 (69-128)||(6407934-6407992)
chr8 (163-193)||(8032357-8032387)
chr8 (163-193)||(18534845-18534875)
chr8 (68-179)||(18719203-18719308)
chr8 (81-197)||(19956142-19956256)
chr8 (68-101)||(1745368-1745401)
chr8 (21-101)||(18722516-18722594)
chr8 (144-193)||(19927353-19927402)
chr8 (137-193)||(29379890-29379947)
chr8 (15-64)||(30421352-30421401)
chr8 (1-48)||(6407882-6407927)
chr8 (1-64)||(14989384-14989445)
chr8 (1-64)||(18719167-18719228)
chr8 (68-128)||(24551521-24551580)
[»] scaffold0290 (1 HSPs)
scaffold0290 (1-202)||(18359-18558)
[»] chr5 (64 HSPs)
chr5 (1-208)||(17815138-17815342)
chr5 (1-179)||(19536093-19536267)
chr5 (3-208)||(26784526-26784716)
chr5 (68-208)||(21910762-21910901)
chr5 (1-161)||(642517-642675)
chr5 (3-78)||(21072131-21072206)
chr5 (1-202)||(23881237-23881434)
chr5 (1-200)||(21099475-21099672)
chr5 (120-200)||(20551149-20551229)
chr5 (15-168)||(29138210-29138363)
chr5 (1-64)||(41566338-41566401)
chr5 (69-202)||(89221-89352)
chr5 (1-94)||(7745569-7745660)
chr5 (120-202)||(23412775-23412856)
chr5 (28-96)||(12352690-12352758)
chr5 (1-94)||(26759319-26759411)
chr5 (68-193)||(4887243-4887367)
chr5 (1-64)||(89328-89389)
chr5 (69-193)||(5430106-5430228)
chr5 (1-64)||(6512337-6512398)
chr5 (15-102)||(32160949-32161037)
chr5 (1-128)||(42243851-42243976)
chr5 (1-51)||(23412891-23412941)
chr5 (19-128)||(35986083-35986192)
chr5 (137-202)||(21072025-21072089)
chr5 (68-193)||(33022885-33023008)
chr5 (124-200)||(7745433-7745508)
chr5 (49-101)||(20551096-20551148)
chr5 (137-193)||(23478678-23478734)
chr5 (1-64)||(9398649-9398712)
chr5 (68-191)||(14086332-14086453)
chr5 (1-94)||(30743150-30743242)
chr5 (120-196)||(12352608-12352684)
chr5 (15-64)||(33022846-33022895)
chr5 (137-193)||(11994219-11994275)
chr5 (5-64)||(21910730-21910787)
chr5 (149-208)||(6512226-6512284)
chr5 (1-62)||(15517139-15517198)
chr5 (54-116)||(25096661-25096723)
chr5 (54-116)||(25154631-25154693)
chr5 (68-193)||(30115666-30115792)
chr5 (79-193)||(31118108-31118220)
chr5 (137-193)||(1915715-1915772)
chr5 (1-34)||(13545454-13545487)
chr5 (69-193)||(28139809-28139933)
chr5 (137-193)||(40032534-40032591)
chr5 (137-193)||(40228974-40229031)
chr5 (68-171)||(9398559-9398659)
chr5 (68-128)||(28464206-28464265)
chr5 (1-64)||(30115782-30115843)
chr5 (69-101)||(33933523-33933555)
chr5 (149-193)||(33933619-33933663)
chr5 (2-64)||(3245348-3245408)
chr5 (15-62)||(11994070-11994117)
chr5 (67-101)||(6512314-6512348)
chr5 (1-93)||(33933441-33933532)
chr5 (1-65)||(6499409-6499471)
chr5 (15-64)||(9089141-9089190)
chr5 (164-193)||(13405429-13405458)
chr5 (67-128)||(23391471-23391531)
chr5 (144-193)||(42244009-42244058)
chr5 (15-101)||(23478536-23478624)
chr5 (15-90)||(25111763-25111839)
chr5 (15-90)||(25170854-25170930)
[»] chr7 (93 HSPs)
chr7 (1-208)||(10882956-10883161)
chr7 (1-208)||(11319575-11319780)
chr7 (1-200)||(13880274-13880471)
chr7 (1-202)||(13692512-13692710)
chr7 (1-199)||(14193244-14193445)
chr7 (3-202)||(11793079-11793276)
chr7 (1-202)||(12366539-12366736)
chr7 (4-208)||(13260407-13260608)
chr7 (1-200)||(22577811-22578009)
chr7 (1-200)||(2913412-2913596)
chr7 (1-200)||(30026075-30026258)
chr7 (68-200)||(2500261-2500392)
chr7 (1-202)||(16316365-16316545)
chr7 (1-101)||(15468086-15468186)
chr7 (1-211)||(44467235-44467428)
chr7 (1-200)||(28409209-28409401)
chr7 (68-202)||(13648935-13649068)
chr7 (1-94)||(21283270-21283361)
chr7 (120-200)||(15088777-15088856)
chr7 (115-202)||(48800430-48800516)
chr7 (115-202)||(13137713-13137799)
chr7 (1-199)||(33691518-33691700)
chr7 (67-199)||(13880827-13880956)
chr7 (1-96)||(9069732-9069828)
chr7 (69-193)||(14426752-14426874)
chr7 (1-61)||(23279887-23279947)
chr7 (38-208)||(13303045-13303196)
chr7 (1-64)||(21695571-21695634)
chr7 (7-78)||(29935272-29935341)
chr7 (82-200)||(4494725-4494840)
chr7 (158-208)||(13730493-13730543)
chr7 (1-165)||(48062654-48062817)
chr7 (1-128)||(4821643-4821768)
chr7 (1-54)||(13302980-13303033)
chr7 (54-201)||(9098035-9098179)
chr7 (1-57)||(13137827-13137883)
chr7 (1-64)||(15088690-15088753)
chr7 (149-208)||(29935161-29935219)
chr7 (68-191)||(30945189-30945310)
chr7 (3-64)||(2265446-2265505)
chr7 (15-116)||(8183111-8183213)
chr7 (42-202)||(13031876-13032032)
chr7 (15-102)||(19710899-19710987)
chr7 (146-202)||(21695684-21695739)
chr7 (1-64)||(24788311-24788372)
chr7 (1-64)||(48236829-48236890)
chr7 (1-64)||(331815-331877)
chr7 (137-198)||(331956-332015)
chr7 (55-208)||(5000637-5000789)
chr7 (83-193)||(9709631-9709739)
chr7 (120-190)||(24788381-24788450)
chr7 (15-116)||(35952561-35952663)
chr7 (15-64)||(9709729-9709778)
chr7 (137-202)||(13890735-13890799)
chr7 (15-64)||(33605868-33605917)
chr7 (137-193)||(19710797-19710853)
chr7 (19-93)||(4428984-4429059)
chr7 (70-193)||(16542835-16542955)
chr7 (70-193)||(16622707-16622827)
chr7 (1-43)||(4494676-4494718)
chr7 (15-128)||(12174203-12174316)
chr7 (41-115)||(13730566-13730640)
chr7 (137-193)||(8998676-8998733)
chr7 (158-199)||(23279832-23279873)
chr7 (68-128)||(1293185-1293244)
chr7 (68-128)||(7339762-7339821)
chr7 (161-193)||(11086802-11086834)
chr7 (27-75)||(13018421-13018469)
chr7 (54-200)||(19236803-19236947)
chr7 (68-168)||(27871931-27872031)
chr7 (1-64)||(28622283-28622344)
chr7 (137-193)||(35952469-35952524)
chr7 (38-101)||(39284467-39284533)
chr7 (160-199)||(15469794-15469833)
chr7 (1-48)||(21692457-21692504)
chr7 (68-191)||(30944156-30944277)
chr7 (1-64)||(39284490-39284553)
chr7 (19-91)||(4411870-4411943)
chr7 (156-193)||(12174122-12174159)
chr7 (15-64)||(16542947-16542996)
chr7 (15-64)||(16622666-16622715)
chr7 (1-49)||(2500208-2500256)
chr7 (68-128)||(5826185-5826244)
chr7 (1-64)||(13648899-13648960)
chr7 (137-193)||(16111681-16111736)
chr7 (68-128)||(19339137-19339196)
chr7 (68-168)||(21381275-21381374)
chr7 (1-64)||(27871880-27871941)
chr7 (1-48)||(32264669-32264714)
chr7 (137-193)||(33605992-33606047)
chr7 (137-193)||(48236732-48236787)
chr7 (68-96)||(48236811-48236839)
chr7 (18-93)||(48805785-48805861)
[»] chr6 (67 HSPs)
chr6 (1-200)||(13435706-13435903)
chr6 (3-197)||(15531404-15531597)
chr6 (1-208)||(9718017-9718222)
chr6 (1-199)||(21625274-21625468)
chr6 (1-202)||(24117003-24117201)
chr6 (1-202)||(23284738-23284936)
chr6 (1-208)||(25597653-25597841)
chr6 (1-208)||(12715205-12715394)
chr6 (1-208)||(13602346-13602534)
chr6 (69-199)||(34451463-34451592)
chr6 (1-208)||(19624153-19624341)
chr6 (115-208)||(19086437-19086529)
chr6 (3-193)||(18435732-18435938)
chr6 (80-208)||(15302422-15302550)
chr6 (120-200)||(14100251-14100330)
chr6 (1-96)||(26972107-26972203)
chr6 (68-202)||(20112490-20112621)
chr6 (68-193)||(15954928-15955052)
chr6 (1-96)||(21618418-21618512)
chr6 (156-208)||(18383965-18384017)
chr6 (3-96)||(22076288-22076380)
chr6 (1-64)||(32544439-32544502)
chr6 (68-190)||(16264954-16265074)
chr6 (137-202)||(15987503-15987567)
chr6 (68-193)||(21235338-21235461)
chr6 (15-64)||(22802327-22802376)
chr6 (4-56)||(19086325-19086377)
chr6 (120-200)||(19689008-19689087)
chr6 (115-199)||(32544555-32544638)
chr6 (59-193)||(10640222-10640353)
chr6 (25-101)||(19470867-19470941)
chr6 (68-193)||(20730505-20730628)
chr6 (1-63)||(29918190-29918250)
chr6 (68-193)||(33351728-33351853)
chr6 (15-86)||(16336313-16336381)
chr6 (3-94)||(19832915-19833005)
chr6 (1-64)||(16877387-16877448)
chr6 (137-193)||(17608104-17608160)
chr6 (120-208)||(18378545-18378632)
chr6 (1-49)||(34451595-34451643)
chr6 (54-116)||(26943789-26943851)
chr6 (137-199)||(26971989-26972050)
chr6 (137-193)||(21128539-21128596)
chr6 (137-193)||(17381739-17381795)
chr6 (68-128)||(19065892-19065951)
chr6 (3-51)||(20112624-20112672)
chr6 (1-43)||(14100373-14100415)
chr6 (137-199)||(16877523-16877585)
chr6 (18-64)||(19065941-19065987)
chr6 (70-128)||(19832867-19832924)
chr6 (15-116)||(20487778-20487880)
chr6 (137-193)||(11525391-11525448)
chr6 (49-78)||(14100355-14100384)
chr6 (15-64)||(16265064-16265113)
chr6 (67-128)||(17381653-17381713)
chr6 (68-101)||(17608214-17608247)
chr6 (15-64)||(17608237-17608286)
chr6 (148-197)||(25592838-25592886)
chr6 (67-96)||(26589847-26589876)
chr6 (68-128)||(139233-139292)
chr6 (68-128)||(147254-147313)
chr6 (68-128)||(12423446-12423505)
chr6 (68-96)||(16877438-16877466)
chr6 (38-93)||(19482933-19482989)
chr6 (137-193)||(20487686-20487741)
chr6 (15-101)||(22386972-22387060)
chr6 (137-193)||(22802434-22802489)
[»] chr2 (78 HSPs)
chr2 (1-202)||(30667157-30667356)
chr2 (3-208)||(20568476-20568680)
chr2 (1-202)||(25037001-25037191)
chr2 (1-202)||(25041108-25041298)
chr2 (5-208)||(22260578-22260778)
chr2 (1-200)||(9015106-9015302)
chr2 (1-200)||(23235175-23235372)
chr2 (1-202)||(24850399-24850597)
chr2 (1-208)||(22187846-22188034)
chr2 (68-202)||(25829338-25829471)
chr2 (1-202)||(21536982-21537180)
chr2 (4-173)||(40782642-40782808)
chr2 (1-200)||(22454725-22454922)
chr2 (1-199)||(38781567-38781744)
chr2 (1-115)||(10009569-10009681)
chr2 (49-179)||(28140391-28140520)
chr2 (1-89)||(7609130-7609216)
chr2 (104-208)||(38631224-38631327)
chr2 (15-128)||(33074406-33074519)
chr2 (1-199)||(22317762-22317976)
chr2 (137-202)||(18376670-18376734)
chr2 (68-193)||(28711454-28711578)
chr2 (1-78)||(19540584-19540659)
chr2 (1-94)||(24576204-24576295)
chr2 (68-200)||(39037391-39037521)
chr2 (120-200)||(13963745-13963824)
chr2 (15-94)||(35743842-35743922)
chr2 (1-64)||(24377269-24377332)
chr2 (83-202)||(30621437-30621554)
chr2 (83-202)||(30624058-30624175)
chr2 (68-202)||(24576284-24576416)
chr2 (1-64)||(30621384-30621447)
chr2 (1-64)||(30624005-30624068)
chr2 (24-200)||(22272323-22272494)
chr2 (68-193)||(20151792-20151915)
chr2 (1-128)||(22785472-22785597)
chr2 (120-191)||(24377356-24377426)
chr2 (137-200)||(44881451-44881513)
chr2 (68-193)||(6573880-6574003)
chr2 (137-202)||(19540701-19540765)
chr2 (1-64)||(25829302-25829363)
chr2 (137-193)||(28700953-28701009)
chr2 (120-179)||(10009524-10009582)
chr2 (1-64)||(18376775-18376838)
chr2 (137-200)||(19115427-19115489)
chr2 (1-64)||(20151905-20151967)
chr2 (15-93)||(34321777-34321856)
chr2 (1-78)||(23595427-23595502)
chr2 (159-193)||(24793727-24793761)
chr2 (159-193)||(24814302-24814336)
chr2 (15-64)||(6573993-6574042)
chr2 (67-128)||(44840639-44840699)
chr2 (137-193)||(1084364-1084420)
chr2 (1-64)||(1586913-1586974)
chr2 (68-128)||(6392854-6392913)
chr2 (1-61)||(13963850-13963910)
chr2 (68-128)||(22776137-22776196)
chr2 (68-128)||(22781515-22781574)
chr2 (68-128)||(28550750-28550809)
chr2 (68-128)||(30557111-30557170)
chr2 (137-193)||(31800627-31800683)
chr2 (68-128)||(40332297-40332356)
chr2 (149-200)||(20569774-20569824)
chr2 (15-93)||(30557160-30557239)
chr2 (15-93)||(31327806-31327885)
chr2 (15-93)||(31334527-31334606)
chr2 (1-64)||(39037511-39037574)
chr2 (69-127)||(22802693-22802750)
chr2 (159-193)||(23392416-23392450)
chr2 (145-195)||(26618847-26618896)
chr2 (137-199)||(45086870-45086932)
chr2 (15-64)||(1084188-1084237)
chr2 (120-200)||(25189638-25189718)
chr2 (15-64)||(28550799-28550848)
chr2 (67-128)||(31800709-31800769)
chr2 (144-200)||(18430674-18430729)
chr2 (161-193)||(21025208-21025240)
chr2 (137-197)||(41121492-41121551)
[»] scaffold0771 (1 HSPs)
scaffold0771 (5-208)||(653-854)
[»] scaffold0116 (1 HSPs)
scaffold0116 (1-200)||(20711-20908)
[»] scaffold0047 (3 HSPs)
scaffold0047 (1-208)||(30398-30599)
scaffold0047 (135-196)||(10175-10235)
scaffold0047 (1-78)||(10076-10151)
[»] scaffold0026 (5 HSPs)
scaffold0026 (1-211)||(60190-60397)
scaffold0026 (14-208)||(115708-115898)
scaffold0026 (80-208)||(8148-8275)
scaffold0026 (38-114)||(151714-151788)
scaffold0026 (1-64)||(8100-8161)
[»] scaffold0005 (4 HSPs)
scaffold0005 (1-208)||(5934-6135)
scaffold0005 (1-199)||(212529-212723)
scaffold0005 (68-128)||(246074-246133)
scaffold0005 (1-64)||(246123-246184)
[»] scaffold0120 (2 HSPs)
scaffold0120 (1-200)||(36516-36712)
scaffold0120 (1-200)||(42293-42489)
[»] scaffold0334 (1 HSPs)
scaffold0334 (1-200)||(9969-10164)
[»] scaffold1434 (1 HSPs)
scaffold1434 (1-174)||(553-723)
[»] scaffold0359 (1 HSPs)
scaffold0359 (1-200)||(5431-5627)
[»] scaffold0004 (4 HSPs)
scaffold0004 (1-202)||(377314-377496)
scaffold0004 (1-200)||(220411-220608)
scaffold0004 (159-208)||(30603-30652)
scaffold0004 (38-200)||(243994-244151)
[»] scaffold0022 (3 HSPs)
scaffold0022 (1-208)||(39599-39790)
scaffold0022 (1-208)||(137659-137850)
scaffold0022 (54-200)||(159296-159438)
[»] scaffold0084 (3 HSPs)
scaffold0084 (1-199)||(49506-49687)
scaffold0084 (1-202)||(32659-32845)
scaffold0084 (15-102)||(181-269)
[»] scaffold0426 (1 HSPs)
scaffold0426 (67-208)||(13850-13990)
[»] scaffold0243 (1 HSPs)
scaffold0243 (1-208)||(4742-4930)
[»] scaffold0395 (1 HSPs)
scaffold0395 (8-202)||(13272-13462)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-200)||(27185-27366)
[»] scaffold0083 (1 HSPs)
scaffold0083 (5-208)||(25724-25908)
[»] scaffold0193 (2 HSPs)
scaffold0193 (53-180)||(16004-16130)
scaffold0193 (1-33)||(15969-16001)
[»] scaffold0485 (2 HSPs)
scaffold0485 (6-94)||(9252-9338)
scaffold0485 (120-200)||(9117-9195)
[»] scaffold0210 (2 HSPs)
scaffold0210 (68-200)||(1870-2001)
scaffold0210 (1-64)||(1834-1895)
[»] scaffold0364 (1 HSPs)
scaffold0364 (67-200)||(6230-6360)
[»] scaffold0227 (2 HSPs)
scaffold0227 (1-101)||(22850-22951)
scaffold0227 (120-193)||(22952-23024)
[»] scaffold0251 (1 HSPs)
scaffold0251 (1-199)||(7877-8059)
[»] scaffold0065 (1 HSPs)
scaffold0065 (68-208)||(1944-2082)
[»] scaffold0023 (2 HSPs)
scaffold0023 (84-199)||(103812-103926)
scaffold0023 (3-67)||(103748-103810)
[»] scaffold0056 (3 HSPs)
scaffold0056 (15-128)||(25486-25599)
scaffold0056 (54-101)||(36024-36071)
scaffold0056 (68-128)||(34640-34699)
[»] scaffold0050 (1 HSPs)
scaffold0050 (68-193)||(35442-35569)
[»] scaffold0003 (2 HSPs)
scaffold0003 (68-193)||(89818-89941)
scaffold0003 (1-64)||(89931-89992)
[»] scaffold1359 (1 HSPs)
scaffold1359 (69-193)||(435-557)
[»] scaffold0337 (1 HSPs)
scaffold0337 (68-208)||(14902-15040)
[»] scaffold0471 (2 HSPs)
scaffold0471 (1-94)||(3478-3570)
scaffold0471 (67-128)||(3558-3618)
[»] scaffold0146 (2 HSPs)
scaffold0146 (69-202)||(15328-15458)
scaffold0146 (1-64)||(15291-15352)
[»] scaffold0066 (2 HSPs)
scaffold0066 (8-78)||(60729-60799)
scaffold0066 (120-202)||(60623-60704)
[»] scaffold0414 (1 HSPs)
scaffold0414 (1-128)||(6968-7093)
[»] scaffold0261 (2 HSPs)
scaffold0261 (137-202)||(5692-5756)
scaffold0261 (1-64)||(5813-5876)
[»] scaffold0161 (2 HSPs)
scaffold0161 (1-64)||(9981-10044)
scaffold0161 (120-197)||(9880-9956)
[»] scaffold0217 (5 HSPs)
scaffold0217 (137-199)||(19343-19404)
scaffold0217 (15-94)||(21976-22056)
scaffold0217 (3-62)||(19207-19266)
scaffold0217 (67-128)||(21928-21988)
scaffold0217 (1-48)||(9733-9778)
[»] scaffold0479 (2 HSPs)
scaffold0479 (1-64)||(10143-10204)
scaffold0479 (120-200)||(10228-10307)
[»] scaffold0247 (2 HSPs)
scaffold0247 (68-168)||(23350-23449)
scaffold0247 (1-48)||(23455-23500)
[»] scaffold0439 (3 HSPs)
scaffold0439 (1-93)||(6586-6677)
scaffold0439 (137-193)||(6455-6511)
scaffold0439 (68-128)||(6537-6596)
[»] scaffold0176 (1 HSPs)
scaffold0176 (1-62)||(9328-9387)
[»] scaffold0012 (2 HSPs)
scaffold0012 (15-96)||(215340-215422)
scaffold0012 (137-193)||(215227-215283)
[»] scaffold0249 (1 HSPs)
scaffold0249 (68-128)||(17602-17661)
[»] scaffold0081 (1 HSPs)
scaffold0081 (137-201)||(40953-41016)
[»] scaffold0064 (2 HSPs)
scaffold0064 (18-101)||(43742-43823)
scaffold0064 (137-193)||(43652-43707)
[»] scaffold0007 (2 HSPs)
scaffold0007 (137-199)||(143399-143460)
scaffold0007 (3-64)||(143264-143325)
[»] scaffold0908 (1 HSPs)
scaffold0908 (141-193)||(3617-3669)
[»] scaffold0269 (1 HSPs)
scaffold0269 (137-193)||(7617-7673)
[»] scaffold0040 (1 HSPs)
scaffold0040 (137-201)||(1244-1307)
[»] scaffold0422 (1 HSPs)
scaffold0422 (137-192)||(12057-12112)
[»] scaffold0015 (1 HSPs)
scaffold0015 (15-62)||(60989-61036)
[»] scaffold0452 (1 HSPs)
scaffold0452 (137-191)||(1616-1670)
[»] scaffold0018 (1 HSPs)
scaffold0018 (159-193)||(6246-6280)
[»] scaffold0297 (2 HSPs)
scaffold0297 (158-191)||(17319-17352)
scaffold0297 (15-76)||(17135-17197)
[»] scaffold0275 (1 HSPs)
scaffold0275 (71-128)||(8511-8567)
[»] scaffold0028 (1 HSPs)
scaffold0028 (144-193)||(5332-5381)
[»] scaffold0655 (1 HSPs)
scaffold0655 (137-193)||(5438-5494)
[»] scaffold0473 (1 HSPs)
scaffold0473 (68-168)||(2498-2598)
[»] scaffold0324 (1 HSPs)
scaffold0324 (1-117)||(10130-10244)
[»] scaffold0280 (1 HSPs)
scaffold0280 (137-193)||(17532-17588)
[»] scaffold0185 (1 HSPs)
scaffold0185 (137-193)||(9625-9681)
[»] scaffold0025 (1 HSPs)
scaffold0025 (120-200)||(74855-74934)
[»] scaffold0011 (3 HSPs)
scaffold0011 (1-64)||(65305-65366)
scaffold0011 (1-64)||(144350-144411)
scaffold0011 (70-102)||(164767-164799)
[»] scaffold0002 (2 HSPs)
scaffold0002 (137-193)||(156360-156416)
scaffold0002 (163-193)||(481519-481549)
[»] scaffold0570 (1 HSPs)
scaffold0570 (15-94)||(1521-1603)
[»] scaffold0211 (1 HSPs)
scaffold0211 (67-102)||(15454-15489)
[»] scaffold1321 (1 HSPs)
scaffold1321 (137-187)||(664-714)
[»] scaffold1263 (1 HSPs)
scaffold1263 (137-187)||(857-907)
[»] scaffold0132 (1 HSPs)
scaffold0132 (15-88)||(37935-38009)
[»] scaffold0043 (3 HSPs)
scaffold0043 (70-128)||(78193-78250)
scaffold0043 (137-193)||(78111-78167)
scaffold0043 (16-64)||(78242-78290)
[»] scaffold0273 (1 HSPs)
scaffold0273 (137-197)||(8132-8195)
[»] scaffold0016 (1 HSPs)
scaffold0016 (67-128)||(937-997)
[»] scaffold0010 (1 HSPs)
scaffold0010 (137-193)||(62036-62093)
[»] scaffold1331 (1 HSPs)
scaffold1331 (68-96)||(469-497)
[»] scaffold0488 (1 HSPs)
scaffold0488 (149-193)||(11350-11394)


Alignment Details
Target: scaffold0411 (Bit Score: 136; Significance: 6e-71; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 12383 - 12581
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||||  ||||||||||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  12383 tgaagctttaagtcttgtgtctcctgatgaactagagcttctggtgatcctcaacttctgatgagatgcttctgatgaacttgcttctgatgacgtcatc 12482  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    ||||||||| ||||||| ||||||||||||||  |||||| ||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||    
T  12483 agctcaggagcacttttatcttcaggagaacttttattcaaatgcttcaagcttcc-tttttgttgattccattactctcttttgttcttccagaaccta 12581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 135; Significance: 3e-70; HSPs: 88)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 52920578 - 52920774
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  52920578 tgaaactttaagtcttgcatctcctgatgaacttcagcttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatc 52920677  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    |  |||||| |||||||  ||||||||| ||| || |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  52920678 acttcaggagcactttt-acttcaggagcacttctcttcagatgcttcaagcttcc-tttttgttgattccttagctctcttttgttcttccagaacct 52920774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 3 - 208
Target Start/End: Original strand, 20646330 - 20646533
Alignment:
Q  3 aagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcag 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||     
T  20646330 aagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatcac 20646429  T
Q  103 ctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaat 202  Q
     ||| || ||| |||| ||||||||| ||| || |||| | |||| ||||||||  ||||||||||||||||||||||||||||||||| ||||||||||    
T  20646430 ttcatgaacac-tttgacttcaggagcacttctcttcaaacgctttaagcttcc-attttgttgattcctttgctctcttttgttcttctagaacctaat 20646527  T
Q  203 gatgat 208  Q
     |||||    
T  20646528 aatgat 20646533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 15903372 - 15903571
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||||||||||||||| || |||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  15903372 tgaagctttaagtcttgcatctcctgataaattacagcttttggtgatcttcagcttctgatgagatggttctgatgaacttgcttctgatgacgtcatc 15903471  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||| | ||| |||| ||| ||||| ||| || |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  15903472 acttcagaagcac-tttgacttaaggagcacttctcttcagatgcttcaagcttcc-tttttgttgattccattgctctcttttgttcttccagaaccta 15903569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 13948513 - 13948714
Alignment:
Q  5 gctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagct 104  Q
    |||||||||||||||||||||||||| ||  | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||  |    
T  13948513 gctttaagtcttgcatctcctgatgagctttagcttctggtgatcttcagcttctgatgagatgcttctgataaacttgcttctgatgacgtcatcactt 13948612  T
Q  105 caggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaatga 204  Q
    || || || ||||| ||||| ||| ||| || ||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||| |    
T  13948613 catgagca-ttttgacttcaagagcacttctcttcagatgctttaagcttcc-tttttgttgattcctttgctctcttttgtttttccagaacctaataa 13948710  T
Q  205 tgat 208  Q
    ||||    
T  13948711 tgat 13948714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 6090905 - 6091102
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||| ||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||     
T  6090905 tgaagttttaagtcttgcatctcctgatgaacttcagcttctggtgatcttctgcttctgatgagatgcttttgatgaacttgcttctgatgacgtcata 6091004  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  ||| || ||| |||  ||||||||| ||| || |||||||||||||||||| | |||||||||||| | ||||||||||||||||||||||||||||    
T  6091005 acttcatgagcac-tttaacttcaggagcacttctcttcagatgcttcaagctt-catttttgttgatttcattgctctcttttgttcttccagaaccta 6091102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 31303561 - 31303755
Alignment:
Q  3 aagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttc---tgatgacgttat 99  Q
    |||||||||||||| ||||||||||  ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||| ||    
T  31303561 aagctttaagtctttcatctcctgagtaactagagcttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgatgacgtcat 31303660  T
Q  100 cagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaa 196  Q
    ||  |||||| ||| |||| ||||||||| ||| || ||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||    
T  31303661 cacttcaggagcac-tttgacttcaggagcacttctcttcagatgctttaagcttcc-tttttgttgattcttttgctctcttttgttcttccagaa 31303755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 33 - 208
Target Start/End: Original strand, 41495179 - 41495352
Alignment:
Q  33 tacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaact 132  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||  ||| || ||| |||| |||||| || |||    
T  41495179 tacaacttctggtgatcttcagtttctgatgagatgcttctgatgaacttgcttctgatgacatcatcacttcatgagcac-tttgacttcagaagcact 41495277  T
Q  133 gctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaatgatgat 208  Q
     || ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41495278 tctcttcagatgctttaagcttcc-tttttgttgattcctttgctctcttttgttcttccagaacctaataatgat 41495352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 49642748 - 49642560
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||  ||| |||    
T  49642748 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctaatgagatgcttctgatgaccttgcttctgattgcgtcatc 49642649  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |                  ||||||||| ||| || |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  49642648 a------------------cttcaggagcacttctcttcagatgcttcaagcttcc-tttttgttgattccattgctctcttttgttcttccagaaccta 49642568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 14392990 - 14392793
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||| |||||||||||| ||||||| ||||||| || ||||| ||||||||  |||| ||||||||||||| |||||| ||||||||||||||||| |||    
T  14392990 tgaaactttaagtcttgtatctcctaatgaacttcagcttctagtgatctt--gcttttgatgagatgcttatgatgatcttgcttctgatgacgtcatc 14392893  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| ||||||   ||||||||| ||| || ||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||    
T  14392892 acttcaggagcactttaa-cttcaggagcacttctcttcagatgcttcaagcttcctttct-gttgattccttagctctcttttgttcttccagaaccta 14392795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 28582279 - 28582476
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatg-agatgcttctgatgaacttgcttctgatgacgttat 99  Q
    ||||||||||||||||||||||||||||||| || | ||||||||||| |||||||||| ||| |  |||||||||||||||||||||||||||||| |     
T  28582279 tgaagctttaagtcttgcatctcctgatgaaatagagcttctggtgattttcagcttctaatgtacttgcttctgatgaacttgcttctgatgacgtcac 28582378  T
Q  100 cagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    ||  |||||| ||| |||||||||||||| | | || |||||| | || |||||||| |||||||||||| |||| |||||| |||||||||||||||||    
T  28582379 cacttcaggagcac-tttgtcttcaggagcagttctcttcagacgttttaagcttcc-tttttgttgatttctttactctctattgttcttccagaacct 28582476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 29951424 - 29951226
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||  | ||| |||||||||| || ||||| ||||||||||||||||||| || |||||||||||||||||||||||| ||||| |||    
T  29951424 tgaagctttaagtctctcgtcttctgatgaacttcagcttctagtgatcttcagcttctgataaggtgcttctgatgaacttgcttctgaagacgtcatc 29951325  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| |||||  | |||||| || |||  | | ||||||||||||||||||||||| ||||| | ||| |||||||||||||||||||| |||||    
T  29951324 acttcaggagcactt--gacttcagtagcactattctacagatgcttcaagcttccttttt-gttgacttcttagctctcttttgttcttccaggaccta 29951228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 30000578 - 30000380
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||  | ||| |||||||||| || ||||| ||||||||||||||||||| || |||||||||||||||||||||||| ||||| |||    
T  30000578 tgaagctttaagtctctcgtcttctgatgaacttcagcttctagtgatcttcagcttctgataaggtgcttctgatgaacttgcttctgaagacgtcatc 30000479  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| |||||  | |||||| || |||  | | ||||||||||||||||||||||| ||||| | ||| |||||||||||||||||||| |||||    
T  30000478 acttcaggagcactt--gacttcagtagcactattctacagatgcttcaagcttccttttt-gttgacttcttagctctcttttgttcttccaggaccta 30000382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 18121608 - 18121411
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatg-agatgcttctgatgaacttgcttctgatgacgttat 99  Q
    ||||||||||| |||||||||||||||||||||| | |||||||||||||| ||||| ||||| |  ||||| ||||||||||||||||||||| || |     
T  18121608 tgaagctttaaatcttgcatctcctgatgaactagagcttctggtgatctttagcttatgatgaacttgcttttgatgaacttgcttctgatgatgtcac 18121509  T
Q  100 cagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    ||  |||||| ||| |||||||||||||| | | || |||||| |||| |||||| | ||||||||| ||| |||||||||| |||||||||||||||||    
T  18121508 cacgtcaggagcac-tttgtcttcaggagcagttctcttcagacgctttaagctt-catttttgttgcttcatttgctctctattgttcttccagaacct 18121411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 25398259 - 25398101
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||  ||||||   |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||    
T  25398259 tgaagctttaagtcttgcatcttatgatgag--acaacttctgatgatcttcagcttctaatgagatgcttctgatgaacttgcttctgatgacgtcgtc 25398162  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttt 161  Q
    |  |||||| ||||| | ||||||||||  || || |||| ||||||||||||| ||||||    
T  25398161 acttcaggagcacttgtatcttcaggagcgcttctcttcaaatgcttcaagctttcttttt 25398101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 12963071 - 12962882
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||                ||||||||||||||||||||||||||||| |||    
T  12963071 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatctt----------------gcttctgatgaacttgcttctgatgacgtcatc 12962988  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  ||| || |||||| | |||||  || ||| || |||||| |||||||||||||||||| ||||||||||| |  |||||||||||||||||||||||    
T  12962987 acttcaagagcacttt-gacttcaatagcacttctcttcagacgcttcaagcttccttttt-gttgattccttagtcctcttttgttcttccagaaccta 12962890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 38 - 202
Target Start/End: Complemental strand, 22804049 - 22803888
Alignment:
Q  38 cttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctat 137  Q
    |||||| ||| ||||||||||||||||||||||||||| |||||||||| ||||||||| ||||  | |||| |||||    ||||||||| ||| || |    
T  22804049 cttctgatgaacttcagcttctgatgagatgcttctgaggaacttgcttttgatgacgtcatcactttaggagcacttaa--cttcaggagcacttctct 22803952  T
Q  138 tcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaat 202  Q
    ||| ||| |||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||    
T  22803951 tcaaatgtttcaagcttccttttt-gttgattccattgctctcttttgttcttctagaacctaat 22803888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 54 - 200
Target Start/End: Complemental strand, 16199744 - 16199601
Alignment:
Q  54 gcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagct 153  Q
    |||||||||||| ||||||| |||||||||||||||||||||| ||||| |||||| |||  ||| ||||||||| |||  | |||||||||||||||||    
T  16199744 gcttctgatgaggtgcttcttatgaacttgcttctgatgacgtcatcagttcaggagcac--ttgacttcaggagcacttttcttcagatgcttcaagct 16199647  T
Q  154 tccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    | |||| ||||||||||| |||||||| ||||||| |||||||||||    
T  16199646 t-ctttcttgttgattccattgctctcatttgttcctccagaaccta 16199601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 61 - 199
Target Start/End: Original strand, 13824265 - 13824403
Alignment:
Q  61 atgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatg--cttcaagcttcctt 158  Q
    |||||||||||||||||||||||||||||||||||| ||||  |||||| |||||||  ||||||||| ||| || |||||  |  |||||||||||| |    
T  13824265 atgagatgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactttt-acttcaggagcacttctcttcaggagcacttcaagcttcc-t 13824362  T
Q  159 ttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  13824363 ttttgttgattccattgctctcttttgttcttccagaacct 13824403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 14969500 - 14969683
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||||||| |||| |||||||| | |||||||||||||||||| ||||              |||||||||||| ||||||||| |||    
T  14969500 tgaagctttaagtcttgcatatcctcatgaactagagcttctggtgatcttcagcatctg--------------atgaacttgcttatgatgacgtcatc 14969585  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    |  |||||| |||||||||||| |||||   | || ||||||||||||||| |||| ||||||||||||| ||||||||| |||||||||||| |||||    
T  14969586 acttcaggagcacttttgtcttaaggagcgattctcttcagatgcttcaagattcc-tttttgttgattcatttgctctcgtttgttcttccataacct 14969683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 67 - 202
Target Start/End: Original strand, 37467541 - 37467674
Alignment:
Q  67 tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttg 166  Q
    |||||||| ||| ||||||||||||||||| ||||  |||||| | |||| | ||||||||| |||  | |||||||||||||||||||||||| |||||    
T  37467541 tgcttctggtgatcttgcttctgatgacgtcatcacttcaggagctcttt-gacttcaggagcacttatcttcagatgcttcaagcttcctttt-tgttg 37467638  T
Q  167 attcctttgctctcttttgttcttccagaacctaat 202  Q
    ||||| ||| |||||||||||||| |||||||||||    
T  37467639 attccattgttctcttttgttctttcagaacctaat 37467674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 16658604 - 16658541
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16658604 tgaagtttcaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 16658541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 49666401 - 49666276
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagat-gcttctgatgaacttgcttctgatgacgttat 99  Q
    |||||||||||||  |||||||||||||||||| || |||||||||||   || ||| |||||| || ||||||||||||||||||||||||||||| ||    
T  49666401 tgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacaacttatgatgaaattgcttctgatgaacttgcttctgatgacgtcat 49666304  T
Q  100 cagctcaggatcacttttgtcttcaggag 128  Q
    ||  |||||| ||| ||||||||||||||    
T  49666303 cacttcaggagcac-tttgtcttcaggag 49666276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 2785238 - 2785330
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgatgac 94  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||  ||||||||| ||  |  ||||||||||||||||||||||||||||    
T  2785238 tgaagctttaagt--tgcatctcctgatgaactacaacttctggtgattctcagcttctaataaacttgcttctgatgaacttgcttctgatgac 2785330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 70 - 193
Target Start/End: Original strand, 11223789 - 11223910
Alignment:
Q  70 ttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgatt 169  Q
    ||||||||||||||||||||||||||| | ||  |||||| ||| |||||||||||||| | | || ||||||||||| || ||||| ||||||||||||    
T  11223789 ttctgatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtcttcaggagcagttctcttcagatgctttaaacttcc-tttttgttgatt 11223886  T
Q  170 cctttgctctcttttgttcttcca 193  Q
    |||||||||| | || ||||||||    
T  11223887 cctttgctctttattattcttcca 11223910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 202
Target Start/End: Complemental strand, 17238871 - 17238741
Alignment:
Q  69 cttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgat 168  Q
    |||||| ||| ||||||||||||||||| ||||  |||| | |||||  | ||||||||| ||| || |||||| |||| ||||||||||||| ||||||    
T  17238871 cttctggtgatcttgcttctgatgacgtcatcacttcagaagcactt--gacttcaggagcacttctcttcagacgctttaagcttccttttt-gttgat 17238775  T
Q  169 tcctttgctctcttttgttcttccagaacctaat 202  Q
    ||||| ||||||||||||||||  ||||||||||    
T  17238774 tccttagctctcttttgttcttaaagaacctaat 17238741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 46349818 - 46349705
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatg-agatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcac 113  Q
    |||| |||||||||||||| |||||||||||||| |||||||||| ||| |  ||||||||||||||| |||||||||||||| | ||  |||||| |||    
T  46349818 ttgcttctcctgatgaactgcaacttctggtgattttcagcttctaatgaacttgcttctgatgaactcgcttctgatgacgtcaccacttcaggagcac 46349719  T
Q  114 ttttgtcttcaggag 128  Q
     ||||||||||||||    
T  46349718 -tttgtcttcaggag 46349705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 83 - 193
Target Start/End: Complemental strand, 47405356 - 47405247
Alignment:
Q  83 gcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctctt 182  Q
    |||||||||||||| || |  |||||| |||||||||||||||||| | |  | |||||| |||| ||||||||||||| |||||||||||||||||||     
T  47405356 gcttctgatgacgtcattacttcaggagcacttttgtcttcaggagcagttttcttcagacgctttaagcttccttttt-gttgattcctttgctctcta 47405258  T
Q  183 ttgttcttcca 193  Q
    |||||||||||    
T  47405257 ttgttcttcca 47405247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 2561361 - 2561424
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||  ||||||||||||||    
T  2561361 tgaagctttaagtcttgcatctcctgatgaactagagcttctggtgattctcagcttctgatga 2561424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 14955615 - 14955692
Alignment:
Q  18 catctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgatgac 94  Q
    |||||||||||||||| ||||||||||||||  ||||||||||||  |  ||||||||||||||||||||||||||||    
T  14955615 catctcctgatgaactgcaacttctggtgattctcagcttctgataaacttgcttctgatgaacttgcttctgatgac 14955692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 196
Target Start/End: Complemental strand, 16658551 - 16658434
Alignment:
Q  83 gcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcc----ttttttgttgattcctttgctc 178  Q
    |||||||||||||| ||||  ||| || || ||||||||||||||| ||| || |||||| |||| ||||||||    |||||| || ||||||||||||    
T  16658551 gcttctgatgacgtcatcacttcatgagcatttttgtcttcaggagcacttctcttcagacgctttaagcttcctttattttttttttattcctttgctc 16658452  T
Q  179 tcttttgttcttccagaa 196  Q
    | ||||||||||||||||    
T  16658451 tattttgttcttccagaa 16658434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 20627417 - 20627356
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||  |||||||||||||||||| |||||||||||||| |||||||||||||||    
T  20627417 tgaagctttaagt--tgcatctcctgatgaactgcaacttctggtgattttcagcttctgatga 20627356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 202
Target Start/End: Original strand, 16032771 - 16032852
Alignment:
Q  120 cttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaat 202  Q
    ||||||||| |||  | ||||||||||||||||||| |||| ||||||||||  ||||||||||||||||||| |||||||||    
T  16032771 cttcaggagcacttttcttcagatgcttcaagcttcatttt-tgttgattccaatgctctcttttgttcttccggaacctaat 16032852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 49553475 - 49553400
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatga 78  Q
    |||| |||||||||||||||||||||||||||| |  ||||||||||||||   ||||||||||||||||||| ||||    
T  49553475 tgaaactttaagtcttgcatctcctgatgaacttcggcttctggtgatctt--acttctgatgagatgcttctaatga 49553400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 21636665 - 21636551
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagat-gcttctgatgaacttgcttctgatgacgttat 99  Q
    |||||||||||||  | || ||||||||||||| | ||||||||||||   |||||||||||||  | ||||||||||| ||||||||||||||||| ||    
T  21636665 tgaagctttaagt--tccaactcctgatgaactgccacttctggtgatacacagcttctgatgaacttgcttctgatgaccttgcttctgatgacgtcat 21636568  T
Q  100 cagctcaggatcacttt 116  Q
    ||  |||||| ||||||    
T  21636567 cacttcaggagcacttt 21636551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 11908817 - 11908761
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    ||||||||||| | |||||  ||||||||||||||||||||||||||||||||||||    
T  11908817 ttcagatgctttaggcttctctttttgttgattcctttgctctcttttgttcttcca 11908761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 21641051 - 21641130
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatg-agatgcttctgatgaacttgcttctgatga 93  Q
    ||||||||||||||||||| ||||||||||||||   |||||||||||| |  ||||| || ||||||||||||||||||    
T  21641051 ttgcatctcctgatgaactgcaacttctggtgattcacagcttctgatgaacttgcttatgctgaacttgcttctgatga 21641130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 38177629 - 38177566
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||||||||||||||||| || ||||| | |||||| |||||||| |||||||||||    
T  38177629 tgaagctttaagtcttgcatctcctaataaactagagcttctgatgatcttctgcttctgatga 38177566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 168
Target Start/End: Complemental strand, 1727995 - 1727846
Alignment:
Q  19 atctcctgatgaactacaacttctggtgatcttcagcttctgatg-agatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcactttt 117  Q
    ||||||||||||||| || |||||||||||   |||||||||||| |  ||||| ||||||||| |||||||||||||| ||||  | || | ||| |||    
T  1727995 atctcctgatgaactgcagcttctggtgatacacagcttctgatgaacttgcttttgatgaactagcttctgatgacgtcatcactttagaagcac-ttt 1727897  T
Q  118 gtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgat 168  Q
    ||||||||||| |||  | ||||||  ||| |||||||| ||| |||||||    
T  1727896 gtcttcaggagcacttttcttcagacactttaagcttccctttgtgttgat 1727846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 2561414 - 2561549
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    |||||||||||||||||||||||||| || | ||  ||| || ||| |||||||||||||| | | || |||||| |||| |||||||| ||||||||||    
T  2561414 gcttctgatgaacttgcttctgatgatgtcaccacttcaagagcac-tttgtcttcaggagcagttctcttcagacgctttaagcttcc-tttttgttga 2561511  T
Q  168 tt------cctttgctctcttttgttcttccagaacct 199  Q
    ||      | |||||||||| |||||||||||||||||    
T  2561512 ttcatttgcatttgctctctattgttcttccagaacct 2561549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 12388791 - 12388729
Alignment:
Q  54 gcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttt 116  Q
    |||||||||||| ||||| |||||||||||||||||||||||| ||||  |||||| ||||||    
T  12388791 gcttctgatgaggtgcttatgatgaacttgcttctgatgacgtcatcacttcaggagcacttt 12388729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 12726216 - 12726166
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatctt 51  Q
    ||||||||||||||||| ||||||||||||||| |||||||| ||||||||    
T  12726216 tgaagctttaagtcttgaatctcctgatgaacttcaacttcttgtgatctt 12726166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 21605649 - 21605550
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatg-agatgcttctgatgaacttgcttctgatgacgttat 99  Q
    |||||||||||||  | |||||||||||||||| ||||||||||||||   || ||||||||| |  ||||| |||||| ||||||||||||||||| ||    
T  21605649 tgaagctttaagt--tccatctcctgatgaactgcaacttctggtgatacacaacttctgatgaacttgcttatgatgaccttgcttctgatgacgtcat 21605552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 199
Target Start/End: Complemental strand, 38177558 - 38177479
Alignment:
Q  119 tcttcaggagaactgct-attcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    |||||||||| ||| || ||||||||| |||||||||||| |||||||||||| |||||||| |||| ||||||||||||||    
T  38177558 tcttcaggagcacttctcattcagatgtttcaagcttcct-ttttgttgattcatttgctct-tttttttcttccagaacct 38177479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 47207892 - 47207941
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||||||||||| || ||||||||||| |||||||||||||||    
T  47207892 ttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatga 47207941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 11869253 - 11869317
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgaga-tgcttctgatga 78  Q
    ||||||| ||||||||||| || ||||||||||| ||||||||||||||| | ||||||||||||    
T  11869253 ttgcatcccctgatgaactgcagcttctggtgattttcagcttctgatgaaattgcttctgatga 11869317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 12752453 - 12752397
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    ||||||||||| | |||||  ||||||||||||| ||||||||||||||||||||||    
T  12752453 ttcagatgctttaggcttctctttttgttgattcttttgctctcttttgttcttcca 12752397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 17238908 - 17238847
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||||||||||||||||| ||| ||| || ||||||||||||||  |||||||||||    
T  17238908 tgaagctttaagtcttgcatctccttatgcacttcatcttctggtgatctt--gcttctgatga 17238847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 20627330 - 20627275
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||    
T  20627330 ttcagacgctttaagcttccttttt-gttgattcctttgctctctattgttcttcca 20627275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 33583416 - 33583492
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctga 90  Q
    |||||||  ||||||||||||||||| ||||||| || |||||||||| ||  ||||||||||||||| ||||||||    
T  33583416 ttgcatcctctgatgaactacaacttttggtgatttttagcttctgatagacttgcttctgatgaactcgcttctga 33583492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 33598036 - 33598112
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctga 90  Q
    |||||||  ||||||||||||||||| ||||||| || |||||||||| ||  ||||||||||||||| ||||||||    
T  33598036 ttgcatcctctgatgaactacaacttttggtgatttttagcttctgatagacttgcttctgatgaactcgcttctga 33598112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 37467506 - 37467567
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||| ||||||| |||||||||||||||||||||  ||||||||||||||  |||||||||||    
T  37467506 tgaagatttaagttttgcatctcctgatgaactactgcttctggtgatctt--gcttctgatga 37467567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 46349679 - 46349623
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||| |||||| |||||||| |||||||||||||||||||||| | |||||||||||    
T  46349679 ttcatatgctttaagcttccctttttgttgattcctttgctctttattgttcttcca 46349623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 119 - 197
Target Start/End: Complemental strand, 49553359 - 49553280
Alignment:
Q  119 tcttcaggagaactgcta-ttcagatgcttcaagcttccttttttgttgattcctttgctct-cttttgttcttccagaac 197  Q
    |||||||||| ||| ||| |||||| |||||||||||||| |||||||||||| |||||||| || |||||||||||||||    
T  49553359 tcttcaggagcacttctacttcagacgcttcaagcttcct-ttttgttgattcatttgctctcctgttgttcttccagaac 49553280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 73 - 193
Target Start/End: Complemental strand, 53056642 - 53056523
Alignment:
Q  73 tgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcct 172  Q
    |||||||||  ||||||||||||| | ||  |||||| |||||| ||||||||||| | |  | |||| | |||| |||||||| |||||||||||||||    
T  53056642 tgatgaactaacttctgatgacgtcaccacttcaggagcacttt-gtcttcaggagcagttttcttcaaacgctttaagcttccctttttgttgattcct 53056544  T
Q  173 ttgctctcttttgttcttcca 193  Q
    ||||| | | |||||||||||    
T  53056543 ttgctttttattgttcttcca 53056523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 19249264 - 19249202
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    ||||||||||||||||||| || || |||||||||  ||||||| |||||||||||||||||||    
T  19249264 ttcagatgcttcaagcttcattctt-gttgattccagtgctctcatttgttcttccagaaccta 19249202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 40851184 - 40851242
Alignment:
Q  69 cttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    |||||||||||||||||||||||||||| ||||  |||||| ||| ||||||||||||||    
T  40851184 cttctgatgaacttgcttctgatgacgtcatcacttcaggagcac-tttgtcttcaggag 40851242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 24775345 - 24775288
Alignment:
Q  144 gcttcaagcttccttttttgttgattcctttgctct--cttttgttcttccagaacct 199  Q
    |||| |||||||| ||||||||||||||||||||||  ||||||||||||||| ||||    
T  24775345 gctttaagcttccatttttgttgattcctttgctcttacttttgttcttccagtacct 24775288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 191
Target Start/End: Complemental strand, 26417542 - 26417489
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttc 191  Q
    |||||||||||||||||||||| || ||||||||| |||||||| ||||||||||    
T  26417542 ttcagatgcttcaagcttccttctt-gttgattccattgctctcatttgttcttc 26417489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 193
Target Start/End: Original strand, 47207996 - 47208073
Alignment:
Q  115 tttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||||||||||| | |  | |||||| |||| |||||||||||| ||||||||| |||||||||| |||||||||||    
T  47207996 tttgtcttcaggagcagttttcttcagacgctttaagcttcctttt-tgttgattcatttgctctctattgttcttcca 47208073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 50300387 - 50300500
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagat-gcttctgatgaacttgcttctgatgacgttatcagctcaggatcac 113  Q
    |||||||  |||||||||| || ||||||||||| || | ||| |||| |  | ||||||||||||||||||||||||||||| || |  |||||| |||    
T  50300387 ttgcatcctctgatgaactgcagcttctggtgatttttaacttatgataaacttgcttctgatgaacttgcttctgatgacgtcattacttcaggagcac 50300486  T
Q  114 ttttgtcttcaggag 128  Q
     ||||||||||||||    
T  50300487 -tttgtcttcaggag 50300500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 50300526 - 50300587
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    |||||| |||| |||||||||||| |||||||||||||||||| | ||||||||||| |||||    
T  50300526 ttcagacgctttaagcttcctttt-tgttgattcctttgctctttattgttcttccaaaacct 50300587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 47405395 - 47405346
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||| ||||||||| || ||||||||||| |||||||||||||||    
T  47405395 ttgcatctcgtgatgaactgcagcttctggtgattttcagcttctgatga 47405346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 51341189 - 51341266
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagat-gcttctgatgaacttgcttctgat 91  Q
    |||||||| |||||||||||||  |||| ||||| | ||||||||||||| || |||||||||  |||||||||||||    
T  51341189 ttgcatcttctgatgaactacagtttctagtgatatacagcttctgatgaaatagcttctgatagacttgcttctgat 51341266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 12726111 - 12726052
Alignment:
Q  140 agatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |||| |||||||||||||||||  ||||||| || | ||||||||||||||||||||||||    
T  12726111 agatccttcaagcttccttttta-ttgattctttagatctcttttgttcttccagaaccta 12726052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 13148586 - 13148642
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    ||||||||||| | | |||  || |||||||||||||||||||||||||||||||||    
T  13148586 ttcagatgctttaggtttctcttcttgttgattcctttgctctcttttgttcttcca 13148642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 18142702 - 18142643
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    ||||||||||||||||||||||||||||| | ||  |||||| ||| ||||||||||||||    
T  18142702 gcttctgatgaacttgcttctgatgacgtcaccacttcaggaacac-tttgtcttcaggag 18142643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 18142738 - 18142677
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||| |||||||||||||||||||||| | |||||| ||| |||  |||||||||||    
T  18142738 tgaagctttaaatcttgcatctcctgatgaactagagcttctgatgaactt--gcttctgatga 18142677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 20725400 - 20725463
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaa 201  Q
    |||||||||||||||||||| || ||||||||| | |||||||| ||||||||| || |||||||    
T  20725400 ttcagatgcttcaagcttcc-ttcttgttgatttcattgctctcatttgttcttacataacctaa 20725463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 29855734 - 29855790
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||| |||| |||||||| |||||||||||||||||| ||| | |||||||||||    
T  29855734 ttcagacgctttaagcttccctttttgttgattcctttgttctttattgttcttcca 29855790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 30054161 - 30054102
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    ||||||||||||||||||||||||||||| ||||  ||| || ||| ||||||||||||||    
T  30054161 gcttctgatgaacttgcttctgatgacgtcatcacttcatgagcac-tttgtcttcaggag 30054102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 40800060 - 40800108
Alignment:
Q  16 tgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||| ||||||||| || ||||||||||| |||||||||||||||    
T  40800060 tgcatctcttgatgaactgcagcttctggtgattttcagcttctgatga 40800108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 46796312 - 46796253
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    ||||||||||||||||||||||||||||| ||||  |||||| ||| | ||||||||||||    
T  46796312 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcac-tctgtcttcaggag 46796253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 51341357 - 51341413
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    ||||||||||| | |||||  |||||||| |||| ||||||||||||||||||||||    
T  51341357 ttcagatgctttaggcttctctttttgttaattcttttgctctcttttgttcttcca 51341413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 51988835 - 51988803
Alignment:
Q  161 ttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||||||||||||||||||||||||||||||    
T  51988835 ttgttgattcctttgctctcttttgttcttcca 51988803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 19888928 - 19888869
Alignment:
Q  3 aagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||||||||||||| |||||||||  | ||||| ||||||||  |||||||||||    
T  19888928 aagctttaagtcttgcatctcttgatgaactttagcttctagtgatctt--gcttctgatga 19888869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 22151566 - 22151616
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgtt 187  Q
    ||||||||||| | | |||  ||||||||||||||||||||||||||||||    
T  22151566 ttcagatgctttaggtttctctttttgttgattcctttgctctcttttgtt 22151616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 11869401 - 11869449
Alignment:
Q  144 gcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||| |||||||||||| |||||||||||||||||| | |||||||||||    
T  11869401 gctttaagcttcctttt-tgttgattcctttgctctttattgttcttcca 11869449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 12388727 - 12388667
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacc 198  Q
    |||||||||||||||||||| || ||||||||||| |||||||| | |||||| ||| ||||    
T  12388727 ttcagatgcttcaagcttcc-ttcttgttgattccattgctctcatatgttctcccaaaacc 12388667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 197
Target Start/End: Original strand, 14073003 - 14073051
Alignment:
Q  148 caagcttccttttttgttgattcctttgctctcttttgttcttccagaac 197  Q
    |||||||||||||| || |||||| |||||||| ||||||||||||||||    
T  14073003 caagcttccttttt-gtagattccattgctctcatttgttcttccagaac 14073051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 14955680 - 14955740
Alignment:
Q  67 tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    |||||||||||| ||||||||||||||||| || |  |||||| ||| ||||||||||||||    
T  14955680 tgcttctgatgaccttgcttctgatgacgtcattacttcaggagcac-tttgtcttcaggag 14955740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 40800117 - 40800189
Alignment:
Q  120 cttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    ||||||||| |||  | |||||| |||| |||||||||||| |||||||| ||||||||||| || ||||||||    
T  40800117 cttcaggagcacttttcttcagacgctttaagcttcctttt-tgttgatttctttgctctctattattcttcca 40800189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 8728866 - 8728815
Alignment:
Q  148 caagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |||||||||||||| ||  ||||| |||||||| |||||||||||||||||||    
T  8728866 caagcttccttttt-gtaaattccattgctctcatttgttcttccagaaccta 8728815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 9080753 - 9080702
Alignment:
Q  148 caagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |||||||||||||| ||  ||||| |||||||| |||||||||||||||||||    
T  9080753 caagcttccttttt-gtaaattccattgctctcatttgttcttccagaaccta 9080702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 14955766 - 14955822
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||| |||| |||||||| |||||||| ||| ||||||||| | |||||||||||    
T  14955766 ttcagacgctttaagcttccctttttgttaatttctttgctctttattgttcttcca 14955822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 22141063 - 22141107
Alignment:
Q  149 aagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||||| ||||||||||||||||||||||   |||||||||||    
T  22141063 aagcttccctttttgttgattcctttgctcttaattgttcttcca 22141107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 33583485 - 33583544
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    |||||||| ||||||| |||||||||||| ||||  |||||| ||| ||||||||||||||    
T  33583485 gcttctgacgaacttgtttctgatgacgtcatcacttcaggagcac-tttgtcttcaggag 33583544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 33598105 - 33598164
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    |||||||| ||||||| |||||||||||| ||||  |||||| ||| ||||||||||||||    
T  33598105 gcttctgacgaacttgtttctgatgacgtcatcacttcaggagcac-tttgtcttcaggag 33598164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 46796363 - 46796302
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||  |||||||||||||||||| || ||||| |||||   |||||||||||||    
T  46796363 tgaagctttaagt--tgcatctcctgatgaactgcagcttcttgtgattcacagcttctgatga 46796302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 131; Significance: 6e-68; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 22600089 - 22599892
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||| |||||||||||||||| || |||    
T  22600089 tgaagctttaagtcttgcatctcctgatgaactagagcttctggtgatctttagcttctgatgagatgcttctgataaacttgcttctgatgatgtcatc 22599990  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    |  |||||| ||||||||||||||||||  || || ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||    
T  22599989 acttcaggagcacttttgtcttcaggagcgcttctcttcagatgcttcaagcttcct-ttttgttgattcatttgctctcttttgttcttccaaaacct 22599892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 20954380 - 20954156
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||    
T  20954380 tgaagctttaagtcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgatgagatgcttctgatgaacttgaatctgatgacgtcatc 20954281  T
Q  101 agctcaggatcacttttgtcttca------------------ggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctctt 182  Q
    |  |||||| ||||||||||||||                  |||| ||| || |||||||||||||||||||| |||||||||||||||||||||||||    
T  20954280 acttcaggagcacttttgtcttcaggagcacttctgttttcaggagcacttctcttcagatgcttcaagcttcc-tttttgttgattcctttgctctctt 20954182  T
Q  183 ttgttcttccagaacctaatgatgat 208  Q
    ||||||||| | |||||||| |||||    
T  20954181 ttgttcttctaaaacctaataatgat 20954156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 23036434 - 23036230
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||||||||| |||||||   ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||    
T  23036434 tgaagctttaagtcttgcatcttctgatgag--acagcttctggtgatcttcagcttctgatgagatgcttctgatgaaattgcttctgatgatgtcatc 23036337  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcct----------tttttgttgattcctttgctctcttttgttctt 190  Q
    |  |||||| ||||| ||||||||||||  || ||||||||||||||||||||||||          |||||||||||||| ||||||| ||||||||||    
T  23036336 acttcaggagcacttgtgtcttcaggagcgcttctattcagatgcttcaagcttcctttttgttttctttttgttgattccattgctcttttttgttctt 23036237  T
Q  191 ccagaac 197  Q
    |||||||    
T  23036236 ccagaac 23036230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 2268701 - 2268897
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||| |||||||||||||||||| |||||||  | ||||| |||||  |  ||||||||||||||||||||||||||||||||||||||||||| |||    
T  2268701 tgaagccttaagtcttgcatctcctaatgaactttagcttctagtgattgtt-gcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatc 2268799  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    |  |||||| ||||||||||||||||||  || || |||||||||| ||| ||||| |||||| |||||| ||||||||||||||||||||||||||||    
T  2268800 acttcaggagcacttttgtcttcaggagcgcttctcttcagatgctacaaacttcc-tttttgatgattcatttgctctcttttgttcttccagaacct 2268897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 35401982 - 35402188
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||||||||| |||||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||    
T  35401982 tgaagctttaagtcttgcatcttctgatgag--acagcttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgaggtcatc 35402079  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcct----------tttttgttgattcctttgctctcttttgttctt 190  Q
    |  |||||| ||||| ||||||||||||  || || |||| ||||||||||||||||          |||||||||||||| ||||||||||||||||||    
T  35402080 acttcaggagcacttgtgtcttcaggagcgcttctcttcatatgcttcaagcttcctttttgttttctttttgttgattccattgctctcttttgttctt 35402179  T
Q  191 ccagaacct 199  Q
    ||| |||||    
T  35402180 ccataacct 35402188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 33256258 - 33256054
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||||||||||||| ||||||  | ||||||||||||||  |||||||||||||||||||||||||||||||||||||| | || |||    
T  33256258 tgaagctttaagtcttgcatctcctgttgaactttagcttctggtgatctt--gcttctgatgagatgcttctgatgaacttgcttctgataatgtcatc 33256161  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| |||||||||||||| ||| ||| || |||| | || | |||||| | ||||||||||||||||||||||||| |||||||| | ||||||    
T  33256160 acttcaggagcacttttgtcttcaagagcacttctcttcaaacgccttaagctt-catttttgttgattcctttgctctcttctgttcttctataaccta 33256062  T
Q  201 atgatgat 208  Q
    || |||||    
T  33256061 ataatgat 33256054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 33276430 - 33276226
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||||||||||||| ||||||  | ||||||||||||||  |||||||||||||||||||||||||||||||||||||| | || |||    
T  33276430 tgaagctttaagtcttgcatctcctggtgaactttagcttctggtgatctt--gcttctgatgagatgcttctgatgaacttgcttctgataatgtcatc 33276333  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| |||||||||||||| ||| ||| || |||| | || | |||||| | ||||||||||||||||||||||||| |||||||| | ||||||    
T  33276332 acttcaggagcacttttgtcttcaagagcacttctcttcaaacgccttaagctt-catttttgttgattcctttgctctcttctgttcttctataaccta 33276234  T
Q  201 atgatgat 208  Q
    || |||||    
T  33276233 ataatgat 33276226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 16235152 - 16235022
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    ||||||||||||||| ||||||||||||| ||||  |||||| ||||| |||||||||||| ||| || ||||||||||||||||||||| |||||||||    
T  16235152 gcttctgatgaacttacttctgatgacgtcatcacttcaggagcacttgtgtcttcaggagcacttcttttcagatgcttcaagcttcct-ttttgttga 16235054  T
Q  168 ttcctttgctctcttttgttcttccagaacct 199  Q
    |||| |||||||||||||||||||||||||||    
T  16235053 ttccattgctctcttttgttcttccagaacct 16235022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 22154030 - 22154244
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||  ||||| ||||||||||||| | |||||||||||| ||||||| |||    
T  22154030 tgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatcttctacttcttatgagatgcttctaaggaacttgcttctaatgacgtcatc 22154129  T
Q  101 agctcaggatcacttt----------------tgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctctttt 184  Q
    |  | |||| ||||||                || ||||||||| ||| || |||||| ||||||||||| | ||||||||||||| |||||||||||||    
T  22154130 actttaggaacacttttacttcaggagcactgtgacttcaggagcacttctcttcagacgcttcaagctt-catttttgttgattcatttgctctctttt 22154228  T
Q  185 gttcttccagaaccta 200  Q
    ||||||||||||||||    
T  22154229 gttcttccagaaccta 22154244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 38282739 - 38282961
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||||||||||||||||||||| | ||| |||||||||| ||| |||||||||||||||||||| |||||||||||||||| || ||     
T  38282739 tgaagctttaagtcttgcatctcctgatgaactagagcttttggtgatctttagcatctgatgagatgcttctgataaacttgcttctgatgaggtcatt 38282838  T
Q  101 agctcaggatcac----------------ttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctctttt 184  Q
    |  |||||| |||                ||||||||||||||| | | || |||||| |||| |||||||| ||||| ||||||| |||||||| ||||    
T  38282839 acttcaggagcactttgtcttcaggaacattttgtcttcaggagcagttctcttcagacgctttaagcttcc-tttttattgattcatttgctctatttt 38282937  T
Q  185 gttcttccagaacctaatgatgat 208  Q
    ||||||| ||||||||||||||||    
T  38282938 gttcttctagaacctaatgatgat 38282961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 19717697 - 19717883
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||||  |||||||  | ||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||| |||    
T  19717697 tgaagctttaagtcttgcatctccatatgaactttagcttctggtgatctt--gcttctgatgagatgcttctgatgaacttgcttatgatgacgtcatc 19717794  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |                  ||||||||| ||| || |||||| |||| |||||||| ||||| ||||||||||||| |||||||||||||||||||||||    
T  19717795 a------------------cttcaggagcacttctcttcagacgctttaagcttcc-tttttattgattcctttgccctcttttgttcttccagaaccta 19717875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 48704377 - 48704572
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||||||||| ||||||||||  | |||||||||||||  ||||||||||||||||||||||||||||| |||||||||||| ||       
T  48704377 tgaagctttaagtcttgcatcttctgatgaactttagcttctggtgatct--agcttctgatgagatgcttctgatgaactagcttctgatgacctt--- 48704471  T
Q  101 agctcaggatcac-ttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
     | |   ||| || |  |  ||||||||| ||| || || ||||||||||||||| | |||||||||||| | |||||||||||||||||||||||||||    
T  48704472 -gtttctgatgacgtcatcacttcaggagcacttctctttagatgcttcaagctt-catttttgttgatttcattgctctcttttgttcttccagaacct 48704569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 199
Target Start/End: Original strand, 36134449 - 36134543
Alignment:
Q  104 tcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    |||||| ||||||||||||||||||  || || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36134449 tcaggagcacttttgtcttcaggagcgcttctcttcagatgcttcaagcttcctttt-tgttgattcctttgctctcttttgttcttccagaacct 36134543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 56 - 199
Target Start/End: Complemental strand, 21191731 - 21191591
Alignment:
Q  56 ttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttc 155  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||  ||  ||| ||||||||| |||  | |||||||||||||||||||    
T  21191731 ttctgatgagatgcttcagatgaacttgcttctgatgacgtcatcacttcaggaggac--ttgacttcaggagcacttttcttcagatgcttcaagcttc 21191634  T
Q  156 cttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    | || |||||||||||  ||||||| ||||||||||||||||||    
T  21191633 c-ttcttgttgattccaatgctctcgtttgttcttccagaacct 21191591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 115 - 208
Target Start/End: Original strand, 1900619 - 1900711
Alignment:
Q  115 tttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaatgatgat 208  Q
    |||||||||||||| | | || |||||| | || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1900619 tttgtcttcaggagcagttctcttcagacgttttaagcttcctttt-tgttgattcctttgctctcttttgttcttccagaacctaatgatgat 1900711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 7309991 - 7310171
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||||||||||||||||| ||  | ||| |||||||||||||||||||||||||               || |||||||||||| |||    
T  7309991 tgaagctttaagtcttgcatctcctgatgagctttagcttatggtgatcttcagcttctgatgaga---------------tgtttctgatgacgtcatc 7310075  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||| | |||||||||||||||||| ||| || ||||||||||  ||||||||    | |||||||| || ||||||||||||||||||||||||||    
T  7310076 acttcagaagcacttttgtcttcaggagcacttctcttcagatgctataagcttcc----tagttgattctttagctctcttttgttcttccagaaccta 7310171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 28492311 - 28492248
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  28492311 tgaagctttaagtcttgcatctcctgatgaactacaacttctgaagatcttcagcttctgatga 28492248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 120 - 202
Target Start/End: Original strand, 1578124 - 1578205
Alignment:
Q  120 cttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaat 202  Q
    ||||||||| ||| || ||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  1578124 cttcaggagcacttctcttcagatgctttaagcttcctttt-tgttgattcctttgctctcttttgttctttcagaacctaat 1578205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 21702986 - 21703111
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatg-agatgcttctgatgaacttgcttctgatgacgttat 99  Q
    |||||||||||||  |||||||||||||||||| || |||||||||||   |||||||||||| |  ||||||||||||||||||||||||||| || ||    
T  21702986 tgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgtacttgcttctgatgaacttgcttctgatgatgtcat 21703083  T
Q  100 cagctcaggatcacttttgtcttcaggag 128  Q
    ||  |||||| ||| ||||||||||||||    
T  21703084 cacttcaggagcac-tttgtcttcaggag 21703111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 173
Target Start/End: Original strand, 12284648 - 12284782
Alignment:
Q  38 cttctggtgatcttcagcttctgatgagat-gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgcta 136  Q
    |||||| ||| |||||||||||| |||  | ||||||||||||||||||||||||||||| ||||  |||| | ||| |||| ||||||||| ||| ||     
T  12284648 cttctgatgaacttcagcttctggtgatcttgcttctgatgaacttgcttctgatgacgtcatcacttcagaagcac-tttgacttcaggagcacttctc 12284746  T
Q  137 ttcagatgcttcaagcttccttttttgttgattcctt 173  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  12284747 ttcagatgtttcaagcttcc-tttttgttgattcctt 12284782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 200
Target Start/End: Complemental strand, 17024852 - 17024692
Alignment:
Q  38 cttctggtgatcttcagcttctgatga-gatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgcta 136  Q
    |||||| |||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||  |||| | |||  ||  ||| || |   ||  |     
T  17024852 cttctgatgatcttcagcttctggtgatgttgcttctgatgaacttgcttctgatgacgttatcacttcagaagcac--ttaactttagaacctcttttc 17024755  T
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |||||||||||||||||||| || ||||||||||| ||| |||| |||||||||||||||||||    
T  17024754 ttcagatgcttcaagcttcc-ttcttgttgattccattgatctcatttgttcttccagaaccta 17024692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 19170245 - 19170061
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagat-gcttctgatgaactt--gcttctgatgacgttatcagctcaggatc 111  Q
    |||||||| ||||||||||  | ||||||||||| |  ||||||||||||  | |||||||||||||||  |||||||||||||| ||||  ||||   |    
T  19170245 ttgcatcttctgatgaactgtagcttctggtgatataaagcttctgatgaacttgcttctgatgaacttttgcttctgatgacgtcatcacttcagaggc 19170146  T
Q  112 acttttgtcttcaggagaactgcta---ttcagatgcttcaag-cttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    ||||| ||||||||||| ||| | |   ||||||||||| ||| ||||  ||||||||||||||||||||||||||||||||||||    
T  19170145 acttt-gtcttcaggagcacttcaaaacttcagatgctttaaggcttctctttttgttgattcctttgctctcttttgttcttcca 19170061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 32785845 - 32785663
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||| ||||              |||||| |||||||||||||| ||||||||| |    
T  32785845 tgaagctttaagtcttgcatctcatgatgaactacaacttctagtgattttca--------------gcttctaatgaacttgcttctaatgacgttacc 32785760  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    |  |||||  ||| |||| ||||||||| | |  | |||||| |||| |||||||| ||||||||||||| |||||| ||| |||||||||||||||||    
T  32785759 acttcaggggcac-tttgccttcaggagcagttttcttcagacgctttaagcttcc-tttttgttgattcatttgctttctattgttcttccagaacct 32785663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 48570127 - 48570014
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgaga-tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcac 113  Q
    ||||||||||||||||| |||| |||||||||||  |||||||||||| | | ||||| ||||||||||| |||||||||||| ||||  |||||| |||    
T  48570127 ttgcatctcctgatgaattacagcttctggtgattctcagcttctgataaaattgcttatgatgaacttgtttctgatgacgtcatcatttcaggagcac 48570028  T
Q  114 ttttgtcttcaggag 128  Q
     ||||||||||||||    
T  48570027 -tttgtcttcaggag 48570014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 1900518 - 1900581
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||||||||||||||||||||||| | ||||||| |||||| ||||||||||||    
T  1900518 tgaagctttaagtcttgcatctcctgatgaactagatcttctggcgatctttagcttctgatga 1900581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 202
Target Start/End: Original strand, 10757645 - 10757776
Alignment:
Q  67 tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttg 166  Q
    ||||||||||||||||||| |||||||||| ||||  | |||| ||||     ||||| ||| ||| || |||| | |||||||||||||||||  ||||    
T  10757645 tgcttctgatgaacttgctcctgatgacgtcatcactttaggagcactaaa--cttcaagagcacttctcttcaaacgcttcaagcttcctttt--gttg 10757740  T
Q  167 attcctttgctctcttttgttcttccagaacctaat 202  Q
    ||||||| |||||||||||||||| |||||||||||    
T  10757741 attccttagctctcttttgttctttcagaacctaat 10757776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 200
Target Start/End: Complemental strand, 12613649 - 12613505
Alignment:
Q  54 gcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagct 153  Q
    |||||||||||| || |||| |||||||||||||||||||||| ||||  |||||| |||  ||| |||||| |  |||  | |||||||||||||||||    
T  12613649 gcttctgatgaggtggttctaatgaacttgcttctgatgacgtcatcacttcaggagcac--ttgacttcagaatcactattcttcagatgcttcaagct 12613552  T
Q  154 tccttttttgttgattcctttgctc-tcttttgttcttccagaaccta 200  Q
    ||| |||||||||||||| | |||| |  ||| |||||||||||||||    
T  12613551 tcc-tttttgttgattccatagctcttagttttttcttccagaaccta 12613505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 190
Target Start/End: Complemental strand, 22427252 - 22427078
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatg-agatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcac 113  Q
    |||||||||||||||||||  | ||||||||||| |||||||||||||| |  |||||||| |  |||||||||||||||| | | ||  |||||| |||    
T  22427252 ttgcatctcctgatgaactggagcttctggtgattttcagcttctgatgaacttgcttctggtagacttgcttctgatgacatcaccacttcaggagcac 22427153  T
Q  114 ttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttctt 190  Q
     || |||||| |||| | |  | ||||||  ||| |||||| | |||||||||||||||||||||||| ||||||||    
T  22427152 -ttggtcttcgggagcagttttcttcagacactttaagctttc-tttttgttgattcctttgctctctattgttctt 22427078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 80 - 208
Target Start/End: Original strand, 30893314 - 30893441
Alignment:
Q  80 cttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctct 179  Q
    ||||||||||||||||| ||||  ||||||  ||||| | ||||||||| ||| || ||||||||||||||| |||| | |||||||||||||| |||||    
T  30893314 cttgcttctgatgacgtcatcacttcaggagtacttt-gacttcaggagcacttctcttcagatgcttcaagtttcc-tctttgttgattccttagctct 30893411  T
Q  180 c-ttttgttcttccagaacctaatgatgat 208  Q
    |  |||| |||| ||||||||||| |||||    
T  30893412 caatttgctctttcagaacctaataatgat 30893441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 25448305 - 25448249
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||| |||| |||||||| |||||||||||||||||||||||| |||||||||||    
T  25448305 ttcagacgctttaagcttccctttttgttgattcctttgctctctattgttcttcca 25448249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 208
Target Start/End: Complemental strand, 28492220 - 28492137
Alignment:
Q  124 aggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaatgatgat 208  Q
    ||||| ||| || |||||| |||| ||||||||||||| |||||||| |||| |||||||| ||||||||||||||||| |||||    
T  28492220 aggagcacttctcttcagacgctttaagcttccttttt-gttgattcatttgttctcttttattcttccagaacctaataatgat 28492137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 29215970 - 29216031
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||  |||||||||||||||| | |||||||||||||| |||||||||||||||    
T  29215970 tgaagctttaagt--tgcatctcctgatgaattgcaacttctggtgattttcagcttctgatga 29216031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 46089153 - 46089266
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagat-gcttctgatgaacttgcttctgatgacgttat 99  Q
    |||||||||||||  |||||||| ||||||||| || |||||||||||   || ||| ||||||  | ||||||||||||||||||||||||||||| ||    
T  46089153 tgaagctttaagt--tgcatctcatgatgaactgcagcttctggtgatacacaacttatgatgaacttgcttctgatgaacttgcttctgatgacgtcat 46089250  T
Q  100 cagctcaggatcactt 115  Q
    ||  |||||| |||||    
T  46089251 cacttcaggagcactt 46089266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 18896360 - 18896298
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    ||||||||||||| |||||||| || ||||||||| |||||||| |||||||||||||||||||    
T  18896360 ttcagatgcttcatgcttccttctt-gttgattccattgctctcatttgttcttccagaaccta 18896298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 2834864 - 2834938
Alignment:
Q  2 gaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatga 78  Q
    ||||||||||||  ||||||||| |||||||| || ||||||||||| |||||||||| ||||  ||||||||||||    
T  2834864 gaagctttaagt--tgcatctcccgatgaactgcagcttctggtgattttcagcttctaatgacttgcttctgatga 2834938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 10251149 - 10251274
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatg-agatgcttctgatgaacttgcttctgatgacgttat 99  Q
    |||||||||||||  |||||||||||||||||| || |||||||||||    ||||||||||| |  |||||  ||||||||||||| ||||||||| ||    
T  10251149 tgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcatagcttctgatgaacttgctttcgatgaacttgcttttgatgacgtcat 10251246  T
Q  100 cagctcaggatcacttttgtcttcaggag 128  Q
    ||  ||| || || |||||||||||||||    
T  10251247 cacttcatgagca-ttttgtcttcaggag 10251274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 2327180 - 2327124
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||| |||| |||||||| |||||||||||||||||||||| | |||||||||||    
T  2327180 ttcagacgctttaagcttccctttttgttgattcctttgctctttattgttcttcca 2327124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 115 - 199
Target Start/End: Original strand, 2834976 - 2835060
Alignment:
Q  115 tttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    |||||||||||||| | |  | |||| | |||| |||||||| |||||||||||||||||||||| | ||||||||||| |||||    
T  2834976 tttgtcttcaggagcaattttcttcaaacgctttaagcttccctttttgttgattcctttgctctttattgttcttccaaaacct 2835060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 17371211 - 17371290
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgatga 93  Q
    ||||||||  |||||||||  | ||||||||||| | ||||||||||| ||  |||||||||||||||||||||||||||    
T  17371211 ttgcatcttttgatgaactgtagcttctggtgatatgcagcttctgatagacttgcttctgatgaacttgcttctgatga 17371290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 26702036 - 26701973
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||||  ||||| ||||||||||  | ||||||||||||||||| |||||||||    
T  26702036 tgaagctttaagtctcccatcttctgatgaactttagcttctggtgatcttcagtttctgatga 26701973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 1578040 - 1578115
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatga 78  Q
    ||||||| |||||||||||||||||||| ||||  | ||||| ||||||||  |||||||| |||||| |||||||||    
T  1578040 tgaagctctaagtcttgcatctcctgataaactttagcttcttgtgatctt--gcttctgacgagatgtttctgatga 1578115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 2327346 - 2327255
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgatga 93  Q
    |||||||||||||  |||||||||||||||||| || ||||||||||| ||  |||||||||  |  ||||||||||||||| |||| ||||||    
T  2327346 tgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgatttttggcttctgataaacttgcttctgatgaactcgcttttgatga 2327255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 10757595 - 10757645
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatctt 51  Q
    ||||||||||||||||||||||||||||||||| || ||| || |||||||    
T  10757595 tgaagctttaagtcttgcatctcctgatgaacttcagcttttgatgatctt 10757645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12284596 - 12284646
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatctt 51  Q
    ||||||| |||||||||||||| |||||||||| || ||||||||||||||    
T  12284596 tgaagctctaagtcttgcatcttctgatgaacttcagcttctggtgatctt 12284646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 44821452 - 44821393
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat 62  Q
    |||||||||||||  ||||||||||||||||||||| ||| |||||||  ||||||||||||    
T  44821452 tgaagctttaagt--tgcatctcctgatgaactacagcttatggtgattctcagcttctgat 44821393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 2267296 - 2267419
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    ||||||||||||||||||||| ||||||| |  |  |||||| |||| | |||||||| || | |  | |||| |||||| |||||||||||| ||||||    
T  2267296 gcttctgatgaacttgcttctaatgacgtcactacttcaggagcactat-gtcttcagaagcagttttcttcatatgctttaagcttcctttt-tgttga 2267393  T
Q  168 ttcctttgctctcttttgttcttcca 193  Q
    || |||| |||||| |||||||||||    
T  2267394 tttctttactctctattgttcttcca 2267419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 23065253 - 23065310
Alignment:
Q  137 ttcagatgcttcaagcttcctttt-ttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||||||||| || || || || |||||||||||||||||||||||||||||||||    
T  23065253 ttcagatgcttctaggtttctcttcttgttgattcctttgctctcttttgttcttcca 23065310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 16235203 - 16235142
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||| ||||| ||||||||||  ||||||   |||||||||||||||||||||||||||||||    
T  16235203 tgaagttttaaatcttgcatcttatgatgag--acaacttctggtgatcttcagcttctgatga 16235142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 168
Target Start/End: Complemental strand, 21204823 - 21204672
Alignment:
Q  18 catctcctgatgaactacaacttctggtgatcttcagcttctgatgagat-gcttctgatgaactt-gcttctgatgacgttatcagctcaggatcactt 115  Q
    |||||| ||||||||| || |||||||||||   || ||||||||||  | |||||||| |||||| |||||||||||||| ||||  |||| | ||| |    
T  21204823 catctcttgatgaactgcagcttctggtgatacacaacttctgatgaacttgcttctgacgaactttgcttctgatgacgtcatcacttcagaagcacgt 21204724  T
Q  116 ttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgat 168  Q
    | ||||||||||| |||  | || ||| |||| |||||||| |||||||||||    
T  21204723 t-gtcttcaggagcacttttctttagacgctttaagcttccctttttgttgat 21204672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 22019680 - 22019712
Alignment:
Q  161 ttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||||||||||||||||||||||||||||||    
T  22019680 ttgttgattcctttgctctcttttgttcttcca 22019712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 22655822 - 22655854
Alignment:
Q  161 ttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||||||||||||||||||||||||||||||    
T  22655822 ttgttgattcctttgctctcttttgttcttcca 22655854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 26548017 - 26547961
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    ||||||||||| | | |||  || |||||||||||||||||||||||||||||||||    
T  26548017 ttcagatgctttaggtttctcttcttgttgattcctttgctctcttttgttcttcca 26547961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 30893266 - 30893327
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||| ||||||||||||||||||||||||||||  | ||| ||||||||||  |||||||||||    
T  30893266 tgaaactttaagtcttgcatctcctgatgaactttagcttttggtgatctt--gcttctgatga 30893327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 22464700 - 22464621
Alignment:
Q  18 catctcctgatgaactacaacttctggtgatcttcagcttctgatg-agatgcttctgatgaacttgcttctgatgacgt 96  Q
    ||||||||||||||||  | | ||||||||| |||||||||| ||| |  |||||||| || ||||||||||||||||||    
T  22464700 catctcctgatgaactgtagcatctggtgattttcagcttcttatgaacttgcttctggtggacttgcttctgatgacgt 22464621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 191
Target Start/End: Original strand, 28380313 - 28380368
Alignment:
Q  137 ttcagatgcttcaagcttcctttt-ttgttgattcctttgctctcttttgttcttc 191  Q
    |||||||||||| || || || || |||||||||||||||||||||||||||||||    
T  28380313 ttcagatgcttctaggtttctcttcttgttgattcctttgctctcttttgttcttc 28380368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 161
Target Start/End: Original strand, 21029019 - 21029110
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttt 161  Q
    ||||||||||||||||||| ||||||||| ||||  |||||| |||  ||| ||| ||||| |||  | |||| |||||| |||||||||||||    
T  21029019 gcttctgatgaacttgcttttgatgacgtcatcacttcaggagcac--ttgacttgaggagcacttttcttcatatgctttaagcttccttttt 21029110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 193
Target Start/End: Complemental strand, 22464585 - 22464508
Alignment:
Q  115 tttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||||||||||| | |  | |||| || ||| ||||||||||||| ||||||||||||||||| | |||||||||||    
T  22464585 tttgtcttcaggagcagttttcttcatatactttaagcttccttttt-gttgattcctttgctctatattgttcttcca 22464508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 193
Target Start/End: Complemental strand, 52350454 - 52350424
Alignment:
Q  163 gttgattcctttgctctcttttgttcttcca 193  Q
    |||||||||||||||||||||||||||||||    
T  52350454 gttgattcctttgctctcttttgttcttcca 52350424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 101
Target Start/End: Original strand, 21984811 - 21984844
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatca 101  Q
    ||||||||||||||||||||||||||||| ||||    
T  21984811 gcttctgatgaacttgcttctgatgacgtcatca 21984844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 96
Target Start/End: Complemental strand, 34255370 - 34255341
Alignment:
Q  67 tgcttctgatgaacttgcttctgatgacgt 96  Q
    ||||||||||||||||||||||||||||||    
T  34255370 tgcttctgatgaacttgcttctgatgacgt 34255341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 39200789 - 39200741
Alignment:
Q  144 gcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||| ||||||||||||| ||||||||||||||||| | |||||||||||    
T  39200789 gctttaagcttccttttt-gttgattcctttgctctttattgttcttcca 39200741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 101
Target Start/End: Original strand, 42284842 - 42284875
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatca 101  Q
    ||||||||||||||||||||||||||||| ||||    
T  42284842 gcttctgatgaacttgcttctgatgacgtcatca 42284875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 2327265 - 2327206
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    |||| |||||||||||||||||||||||| ||||  |||| | ||| ||||||||||||||    
T  2327265 gcttttgatgaacttgcttctgatgacgtcatcacttcagaagcac-tttgtcttcaggag 2327206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 19038336 - 19038368
Alignment:
Q  161 ttgttgattcctttgctctcttttgttcttcca 193  Q
    ||||||||||||||||| |||||||||||||||    
T  19038336 ttgttgattcctttgctttcttttgttcttcca 19038368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 20109736 - 20109685
Alignment:
Q  148 caagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |||||||||||||| || |||||| ||| |||| |||||||||||||||||||    
T  20109736 caagcttccttttt-gtagattccattgttctcatttgttcttccagaaccta 20109685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 21135023 - 21134991
Alignment:
Q  69 cttctgatgaacttgcttctgatgacgttatca 101  Q
    |||||||||||||||||||||||||||| ||||    
T  21135023 cttctgatgaacttgcttctgatgacgtcatca 21134991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 23024984 - 23025043
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    |||| |||||||||||||||||||||||| ||||  |||| | ||| ||||||||||||||    
T  23024984 gcttttgatgaacttgcttctgatgacgtcatcacttcagaagcac-tttgtcttcaggag 23025043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 25448390 - 25448331
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    |||||| |||||||||||||||||||||| ||||  ||||||  || ||||||||||||||    
T  25448390 gcttctaatgaacttgcttctgatgacgtcatcacttcaggagtac-tttgtcttcaggag 25448331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 200
Target Start/End: Complemental strand, 26701981 - 26701853
Alignment:
Q  70 ttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgatt 169  Q
    |||||||||||||||||||||||| || ||||  ||| || |||  ||| ||||||||| |||  | |||| | |||||||||||||  || ||||||||    
T  26701981 ttctgatgaacttgcttctgatgatgtcatcacttcatgagcac--ttgacttcaggagcacttttcttcatacgcttcaagcttcc-cttatgttgatt 26701885  T
Q  170 cctttgctc-tcttttgttcttccagaaccta 200  Q
    || | |||| |  |||||||||||||||||||    
T  26701884 ccatagctcttaatttgttcttccagaaccta 26701853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 29216091 - 29216146
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||| |||| |||||||||||| ||||||||| |||| ||||| |||||||||||    
T  29216091 ttcagacgctttaagcttcctttt-tgttgattcttttgatctctattgttcttcca 29216146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 30572369 - 30572414
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgat 48  Q
    |||||||||||||  || ||||||||||||||| ||||||||||||||    
T  30572369 tgaagctttaagt--tgtatctcctgatgaactgcaacttctggtgat 30572414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 36134362 - 36134419
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctg 60  Q
    |||| |||||||||||| |||| |||||||   ||| |||||||||||||||||||||||    
T  36134362 tgaaactttaagtcttgtatcttctgatgag--acagcttctggtgatcttcagcttctg 36134419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 44821401 - 44821353
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttt 116  Q
    ||||||||| ||||||||||||||||||| ||||  |||||| ||||||    
T  44821401 gcttctgataaacttgcttctgatgacgtcatcacttcaggagcacttt 44821353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 128; Significance: 4e-66; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 4884 - 4679
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||||||||| ||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||    
T  4884 tgaagctttaagtcttgcatcttctgatgaactagagcttctggtgatcttcagcttatgatgagatgcttctgatgaacttgcttctgatgacatcatc 4785  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| ||| |||| ||||||||| ||| || |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||     
T  4784 acttcaggagcac-tttgacttcaggagcacttctcttcagatgcttcaaacttcc-tttttgttgattcctttgctctcttttgttcttccagaacctt 4687  T
Q  201 atgatgat 208  Q
    || |||||    
T  4686 ataatgat 4679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 128; Significance: 4e-66; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 19409 - 19212
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||    
T  19409 tgaagctttaagtcttgcatctcctcatgaactacaacttctggtgatctt--gcttcttatgagatgcttctgatgaacttgcttctgatgacgttatc 19312  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| |||||  | ||||||||| ||| || |||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||    
T  19311 acttcaggagcactt--gacttcaggagcacttctcttcagacgcttcaagcttccttttttgttgactccttagctctcttttgttcttccataaccta 19214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 99145 - 99053
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgatgac 94  Q
    |||||||||||||  ||||  |||||||||||||||||||||||||||||||||||||||||  |  |||||||||||||||| ||| |||||||    
T  99145 tgaagctttaagt--tgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaacttacttttgatgac 99053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 127; Significance: 2e-65; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 45833562 - 45833759
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||| |||    
T  45833562 tgaagctttaagtcttgcatctcctgatgaactagagcttctggtgatctttagcttctgatgagatgcttatgataaacttgcttctgatgacgtcatc 45833661  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    |  ||| || ||||||||||||||||||  || || |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||    
T  45833662 acttcaagagcacttttgtcttcaggagcgcttcttttcagatgcttcaagcttcc-tttttgttgattcgtttgctctcttttgttcttccaaaacct 45833759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 14833564 - 14833765
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||     ||||||||| |||||| ||||||||||||| |||||    
T  14833564 tgaagctttaagtcttgcatctcctgatgaattacaacttctggagatcttcagcttct-----gatgcttcttatgaacctgcttctgatgactttatc 14833658  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| |||||||||||||||||| ||| |  ||||||||||||||| || | |||||||||||| ||||||||||||||||||||||||  ||||    
T  14833659 acttcaggagcacttttgtcttcaggagcacttcgcttcagatgcttcaagttttc-tttttgttgatttctttgctctcttttgttcttccaggtccta 14833757  T
Q  201 atgatgat 208  Q
    || |||||    
T  14833758 ataatgat 14833765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 14604849 - 14604655
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||| ||||||||||||| |  | |||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||| ||     
T  14604849 tgaagctttaagtcttggatctcctgatgaagtttagcttctgatgatctt--gcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatt 14604752  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    |  |||||| ||| |||| ||||||||| ||| || |||||| | ||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  14604751 acttcaggagcac-tttgacttcaggagcacttctcttcagacgtttcaagcttcc-tttttgttgattccttagctctcttttgttcttccagaacct 14604655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 16632608 - 16632805
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||||||||||||||||||||  | ||||| ||||||||  |||||||||||||||||| |||||| |||||||||||||  || |||    
T  16632608 tgaagctttaagtcttgcatctcctgatgaactttagcttctagtgatctt--gcttctgatgagatgcttttgatgaccttgcttctgatggtgtcatc 16632705  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||| | |||||| | ||| ||||| ||| || |||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||    
T  16632706 acttcagaagcacttt-gactttaggagcacttctcttcagatgcttcaagcttcctttt-tgttgattccattgctctcttttgtttttccagaaccta 16632803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 12601273 - 12601473
Alignment:
Q  5 gctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagct 104  Q
    |||||||||||||||||||  ||||| ||  ||||||| ||||||||  |||||||||||||||||||| |||||  ||||| ||||||| | ||||  |    
T  12601273 gctttaagtcttgcatctcgagatgagctttaacttctagtgatctt--gcttctgatgagatgcttcttatgaaaatgcttttgatgacatcatcactt 12601370  T
Q  105 caggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaatga 204  Q
    ||||| |||||||||||| ||||  ||| || ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  12601371 caggagcacttttgtcttaaggaacacttctcttcagatgccttaagcttcctttt-tgttgattcctttgctctcttttgttcttccagaacctaataa 12601469  T
Q  205 tgat 208  Q
    ||||    
T  12601470 tgat 12601473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 37435478 - 37435268
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgtt--- 97  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||  || |||||||||||||||||||||||||||||||||||||| ||       
T  37435478 tgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatctt--gcctctgatgagatgcttctgatgaacttgcttctgatgaccttgct 37435381  T
Q  98 ------------atcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttg 185  Q
                ||||  |||||| |||| ||  ||||||||| ||| || ||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  37435380 tctgatgacgtcatcacttcaggagcactatta-cttcaggagcacttctcttcagatgcttcaagcttccttttt-gttgattcatttgctctcttttg 37435283  T
Q  186 ttcttccagaaccta 200  Q
    |||||||||||||||    
T  37435282 ttcttccagaaccta 37435268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 67 - 208
Target Start/End: Original strand, 9141095 - 9141235
Alignment:
Q  67 tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttg 166  Q
    ||||||||| |||||||| ||||||||||| ||||  |||||| |||||||||||||||||| ||| || |||||| || | |||||||| |||||||||    
T  9141095 tgcttctgaagaacttgcatctgatgacgtcatcacttcaggagcacttttgtcttcaggagcacttctcttcagacgccttaagcttcc-tttttgttg 9141193  T
Q  167 attcctttgctctcttttgttcttccagaacctaatgatgat 208  Q
    ||||||||||||||||||||||||||| |||||||| |||||    
T  9141194 attcctttgctctcttttgttcttccataacctaataatgat 9141235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 12811121 - 12810941
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||||| |||||||| | |||||||||||||||  || ||||||||||||||||||||||||||||| |||||||||||||    
T  12811121 tgaagctttaagtcttgcatctcctaatgaactagagcttctggtgatcttctactactgatgagatgcttctgatgaacttgcttttgatgacgttatc 12811022  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |                  |||||| || ||| ||  ||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  12811021 a------------------cttcagaagcacttctgctcagatgctacaagcttcc-tttttgttgattccattgctctcttttgttcttccagaaccta 12810941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 208
Target Start/End: Complemental strand, 29680484 - 29680297
Alignment:
Q  4 agctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagc 103  Q
    ||||||||||||||||||||||| | ||||| | |||||||||||||||||||||||||||||||||||||||||               ||| ||||      
T  29680484 agctttaagtcttgcatctcctggtaaactagagcttctggtgatcttcagcttctgatgagatgcttctgatga---------------cgtcatcact 29680400  T
Q  104 tcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaatg 203  Q
    |||||| |||||| | ||||||||  ||| || ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||     
T  29680399 tcaggagcacttt-gacttcaggaacacttctcttcagatacttcaagcttccttttt-gttgattcctttgctctcttttgttcttctagaacctaata 29680302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 40846267 - 40846383
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||  ||||| |||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  40846267 tgaagctttaagtctctcatcttctgatgaacttcagcttccggtgatcttcagcttctgatgagatgcttctgatgaacttgtttctgatgacgtcatc 40846366  T
Q  101 agctcaggatcactttt 117  Q
    |  |||||| |||||||    
T  40846367 acttcaggagcactttt 40846383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 6641851 - 6642045
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||| |||  ||||| |||||||| | || ||||||||||| ||  |||||||||||| |||||||||||||||||||| ||||||||| |||    
T  6641851 tgaagctttaaatctctcatcttctgatgaaattcagcttctggtgatatt--gcttctgatgaggtgcttctgatgaacttgcttatgatgacgtcatc 6641948  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| |||  ||| |||||| || ||   | |||||||||||||||||||| || ||||||| ||| |||||||| |||||||||||||||||||    
T  6641949 acttcaggagcac--ttgacttcagaagcacatttcttcagatgcttcaagcttcc-ttcttgttgactccattgctctcatttgttcttccagaaccta 6642045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 82 - 202
Target Start/End: Complemental strand, 19620955 - 19620837
Alignment:
Q  82 tgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctct 181  Q
    ||||||||||||||| ||||  ||||||||||||| | ||||||||| ||  || ||||||||||| ||||||||||||| |||||||||||||||||||    
T  19620955 tgcttctgatgacgtcatcacttcaggatcacttt-gacttcaggagcacgtctcttcagatgctttaagcttccttttt-gttgattcctttgctctct 19620858  T
Q  182 tttgttcttccagaacctaat 202  Q
    |||||||||||||||||||||    
T  19620857 tttgttcttccagaacctaat 19620837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 23123599 - 23123672
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctg 74  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||    
T  23123599 tgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatcttctgcttctgatgagatgcttctg 23123672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 38 - 199
Target Start/End: Original strand, 56034762 - 56034922
Alignment:
Q  38 cttctggtgatcttcagcttctgatgagat-gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgcta 136  Q
    |||||| ||| |||||||||||| |||  | |||||||||||||||||||||||| |||| ||||  |||| | |||||||  ||||||||  |||  |     
T  56034762 cttctgatgaacttcagcttctggtgatcttgcttctgatgaacttgcttctgattacgtcatcacttcagaagcactttta-cttcaggatcacttttc 56034860  T
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    |||||| ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||    
T  56034861 ttcagacgcttcaagctttctttt-tgttgattcatttgctctcttttgttcttccagaacct 56034922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 19911821 - 19911760
Alignment:
Q  3 aagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19911821 aagctttaagtcttgcatctcctgatgaactacaacttctgatgatcttcagcttctgatga 19911760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 115 - 208
Target Start/End: Original strand, 3395906 - 3395998
Alignment:
Q  115 tttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaatgatgat 208  Q
    |||| ||||||||| | | || |||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  3395906 tttgacttcaggagcagttctcttcagacgctttaagcttcctttt-tgttgattcctttgctctcttttgttcttccagaacctaataatgat 3395998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 10073102 - 10073286
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||||||||||||||||||||||  |||||||| || ||||||||||| |||     || | |       |||||||||||| | | |    
T  10073102 tgaagctttaagtcttgcatctcctgatgaactactgcttctggtaattttcagcttctggtga-----ttttca-------gcttctgatgacatcacc 10073189  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    |  |||||| |||||| ||||||||||| |||  | |||||| |||| |||||||||||| |||||||||||||||||||| ||||||||||| |||||    
T  10073190 acttcaggagcacttt-gtcttcaggagcacttttcttcagacgctttaagcttcctttt-tgttgattcctttgctctctattgttcttccataacct 10073286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 3483889 - 3483952
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||    
T  3483889 tgaagctttaagtcttgcatctcttaatgaactataacttctggtgatcttcagcttctgatga 3483952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 14904299 - 14904236
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  14904299 tgaagctttaggtcttgcatctcctgatgaactacaacttctggtgatcttcagattttgatga 14904236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 19884869 - 19884932
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||    
T  19884869 tgaagctttaagtcttgcatctcctgatgaactacagcttctggtgattgtcagcttctgatga 19884932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 23750688 - 23750758
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgctt 71  Q
    ||||||||||||||||||||||||||||||||| || |||||||| ||||| | |||||||||||||||||    
T  23750688 tgaagctttaagtcttgcatctcctgatgaacttcagcttctggttatctttaacttctgatgagatgctt 23750758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 14904128 - 14904058
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaatgatgat 208  Q
    |||||| |||| ||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  14904128 ttcagacgctttaagcttc-ttttttgtttattcatttgctctcttttgttcttccagaacctaatgatgat 14904058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 17247426 - 17247503
Alignment:
Q  18 catctcctgatgaactacaacttctggtgatcttcagcttctgatg-agatgcttctgatgaacttgcttctgatgac 94  Q
    |||||||||||||||| || ||||||||||| |||||||||||||| |  ||||||||||||||| ||||||||||||    
T  17247426 catctcctgatgaactgcagcttctggtgattttcagcttctgatgaacttgcttctgatgaactcgcttctgatgac 17247503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 6517653 - 6517714
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||  ||||||||||||||    
T  6517653 tgaagctttaagt--tgcatctcctgatgaactacaacttctggtgattctcagcttctgatga 6517714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 17540721 - 17540783
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |||||||||||||||||||||| || ||||||||| |||||||| |||||||||||||||||||    
T  17540721 ttcagatgcttcaagcttccttctt-gttgattccattgctctcatttgttcttccagaaccta 17540783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 22089762 - 22089869
Alignment:
Q  8 ttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagctcag 107  Q
    |||| |||| ||||| ||||||| ||  | |||||||||||||||| ||||||||||| | ||||||||| |||||||||  ||||||||||||  ||||    
T  22089762 ttaattctttcatcttctgatgatctttagcttctggtgatcttcaacttctgatgaggtacttctgatgcacttgcttcgaatgacgttatcacttcag 22089861  T
Q  108 gatcactt 115  Q
    || |||||    
T  22089862 gagcactt 22089869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 3395758 - 3395840
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaactt 82  Q
    ||||| |||||||||||||||||||||||||||| | ||||| |||||||||| ||||||||  |  ||||||||||||||||    
T  3395758 tgaagatttaagtcttgcatctcctgatgaactatagcttctagtgatcttcaacttctgataaacttgcttctgatgaactt 3395840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 198
Target Start/End: Original strand, 55380528 - 55380605
Alignment:
Q  120 cttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacc 198  Q
    ||||||||| ||| || |||||| ||||||||||||||||| |||||||||||| ||||||||||||| || |||||||    
T  55380528 cttcaggagcacttctcttcagacgcttcaagcttcctttt-tgttgattccttagctctcttttgttttttcagaacc 55380605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 29121608 - 29121732
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    |||||||||||||||||| |||||||||  ||||  ||| || |||||| ||||||||| | | |  | |||||| | || |||||||| ||||||||||    
T  29121608 gcttctgatgaacttgctactgatgacgccatcacttcaagagcacttt-gtcttcaggtgcagttttcttcagacgttttaagcttccctttttgttga 29121706  T
Q  168 ttcctttgctctcttttgttcttcca 193  Q
    |||||||||||| | |||||||||||    
T  29121707 ttcctttgctctttattgttcttcca 29121732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 10693019 - 10693080
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||  ||||||||||||||||||||| |||||||||||  ||||||||||||||    
T  10693019 tgaagctttaagt--tgcatctcctgatgaactacagcttctggtgattctcagcttctgatga 10693080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 10906785 - 10906846
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||  ||||||||||||||||||||| |||||||||||  ||||||||||||||    
T  10906785 tgaagctttaagt--tgcatctcctgatgaactacagcttctggtgattctcagcttctgatga 10906846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 54680096 - 54680157
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||  |||||||||||||||||| || ||||||||||| |||||||||||||||    
T  54680096 tgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattttcagcttctgatga 54680157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 15139395 - 15139482
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaa-cttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttc 87  Q
    |||| ||||||||||  ||||| ||||||||||   | |||||||||||||||||||||||| ||| ||||||| |||||||||||||    
T  15139395 tgaatctttaagtctatcatcttctgatgaacttttagcttctggtgatcttcagcttctgacgaggtgcttctaatgaacttgcttc 15139482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 193
Target Start/End: Complemental strand, 13576006 - 13575898
Alignment:
Q  83 gcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctctt 182  Q
    |||||||||||||| | ||  |||||| |||||| ||||||||||| | |  | |||||| |||| ||||||||||||| |||||||| ||||||||||     
T  13576006 gcttctgatgacgtcaccacttcaggagcacttt-gtcttcaggagcagttttcttcagacgctttaagcttccttttt-gttgattcatttgctctcta 13575909  T
Q  183 ttgttcttcca 193  Q
    |||||||||||    
T  13575908 ttgttcttcca 13575898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 193
Target Start/End: Original strand, 54680147 - 54680255
Alignment:
Q  83 gcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctctt 182  Q
    |||||||||||||| | ||  |||||| |||||| ||||||||||| | |  | |||||| |||| |||||||||||| |||||||||||||||||| |     
T  54680147 gcttctgatgacgtcaccacttcaggagcacttt-gtcttcaggagcaattttcttcagacgctttaagcttcctttt-tgttgattcctttgctcttta 54680244  T
Q  183 ttgttcttcca 193  Q
    |||||||||||    
T  54680245 ttgttcttcca 54680255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 13576045 - 13575996
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||||||||||| || ||||||||||| |||||||||||||||    
T  13576045 ttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatga 13575996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 413170 - 413231
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||  || ||||||||||||||| || ||||||||||| |||||||||||||||    
T  413170 tgaagctttaagt--tgaatctcctgatgaactgcagcttctggtgattttcagcttctgatga 413231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 14571192 - 14571253
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||  |||||||||||||||||| ||||||||||||||   |||||||||||||    
T  14571192 tgaagctttaagt--tgcatctcctgatgaactgcaacttctggtgattcacagcttctgatga 14571253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 14571243 - 14571302
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    ||||||||||||||||||||||||||||| ||||  |||||| ||| ||||||||||||||    
T  14571243 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcac-tttgtcttcaggag 14571302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 55380458 - 55380519
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||||||||||||||||| ||||||| || |||||| |||||||  |||||||||||    
T  55380458 tgaagctttaagtcttgcatctcctaatgaacttcagcttctgatgatctt--gcttctgatga 55380519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 23750751 - 23750811
Alignment:
Q  140 agatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaat 202  Q
    |||||||| ||||||||||||  ||||||||||| ||||| ||||||||||| ||||||||||    
T  23750751 agatgctttaagcttcctttt--gttgattccttagctcttttttgttcttctagaacctaat 23750811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 193
Target Start/End: Original strand, 33378758 - 33378793
Alignment:
Q  158 tttttgttgattcctttgctctcttttgttcttcca 193  Q
    ||||||||||||||||||||||||||||||||||||    
T  33378758 tttttgttgattcctttgctctcttttgttcttcca 33378793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 3497936 - 3497997
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    |||||| |||| |||||||||||| |||||||||||||||||| | ||||||||||| |||||    
T  3497936 ttcagacgctttaagcttcctttt-tgttgattcctttgctctatattgttcttccaaaacct 3497997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 125
Target Start/End: Original strand, 10693070 - 10693126
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcag 125  Q
    ||||||||||||||||||||||||||||| ||||  |||||| ||| |||||||||||    
T  10693070 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcac-tttgtcttcag 10693126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 125
Target Start/End: Original strand, 10906836 - 10906892
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcag 125  Q
    ||||||||||||||||||||||||||||| ||||  |||||| ||| |||||||||||    
T  10906836 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcac-tttgtcttcag 10906892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 3105329 - 3105230
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    ||||||||||||||||||| ||||||||| ||||  |||||| |||  ||||||||||||| | |  | ||||||  ||| |||||||| ||||||||||    
T  3105329 gcttctgatgaacttgcttttgatgacgtcatcacttcaggagcac-cttgtcttcaggagcagttttcttcagacactttaagcttccctttttgttga 3105231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 3793291 - 3793348
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctg 60  Q
    |||||||||||||  |||||||||||||||||| || ||||| ||||| |||||||||||    
T  3793291 tgaagctttaagt--tgcatctcctgatgaactgcagcttctagtgattttcagcttctg 3793348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 19911718 - 19911678
Alignment:
Q  168 ttcctttgctctcttttgttcttccagaacctaatgatgat 208  Q
    |||||||||||||||||||||||||||||||| || |||||    
T  19911718 ttcctttgctctcttttgttcttccagaacctcataatgat 19911678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 41114562 - 41114499
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaa 201  Q
    |||| ||||||||||||||| || | ||||||||| |||||||| |||||||||| |||||||||    
T  41114562 ttcatatgcttcaagcttcc-ttctcgttgattccattgctctcatttgttcttcgagaacctaa 41114499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 8105889 - 8105947
Alignment:
Q  69 cttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    |||||||||||||||||||||||||| | ||||  |||||| ||| ||||||||||||||    
T  8105889 cttctgatgaacttgcttctgatgacatcatcacttcaggagcac-tttgtcttcaggag 8105947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 40860841 - 40860951
Alignment:
Q  18 catctcctgatgaactacaacttctggtgatcttcagcttctgatgaga-tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttt 116  Q
    ||||||||||||||||  | |||||||||||   || ||||||||||   ||||| ||||||||| |||||||||||||| ||||  |||| | ||| ||    
T  40860841 catctcctgatgaactgtagcttctggtgatacacaacttctgatgaacctgcttatgatgaactagcttctgatgacgtcatcacttcagaagcac-tt 40860939  T
Q  117 tgtcttcaggag 128  Q
    ||||||||||||    
T  40860940 tgtcttcaggag 40860951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 8105973 - 8106015
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctct 179  Q
    |||||| |||| |||||||| ||||||||||||||||||||||    
T  8105973 ttcagacgctttaagcttccctttttgttgattcctttgctct 8106015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 191
Target Start/End: Complemental strand, 17787846 - 17787793
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttc 191  Q
    |||||||||||||||||||| || ||||||||| | |||||||| ||||||||||    
T  17787846 ttcagatgcttcaagcttcc-ttcttgttgatttcattgctctcatttgttcttc 17787793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 193
Target Start/End: Complemental strand, 17993547 - 17993517
Alignment:
Q  163 gttgattcctttgctctcttttgttcttcca 193  Q
    |||||||||||||||||||||||||||||||    
T  17993547 gttgattcctttgctctcttttgttcttcca 17993517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 193
Target Start/End: Complemental strand, 22675338 - 22675304
Alignment:
Q  159 ttttgttgattcctttgctctcttttgttcttcca 193  Q
    ||||||||||||||||||||||| |||||||||||    
T  22675338 ttttgttgattcctttgctctctattgttcttcca 22675304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 40846385 - 40846450
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctc-ttttgttcttccagaacctaat 202  Q
    |||||||||||||||||||| |||||||||||||| |  |||||  ||||||||| |||||||||||    
T  40846385 ttcagatgcttcaagcttcc-tttttgttgattccataactctcaatttgttctttcagaacctaat 40846450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 101
Target Start/End: Original strand, 6517704 - 6517737
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatca 101  Q
    ||||||||||||||||||||||||||||| ||||    
T  6517704 gcttctgatgaacttgcttctgatgacgtcatca 6517737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 10693162 - 10693211
Alignment:
Q  144 gcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||| |||||||| |||||||||||||||||||||| | ||||| |||||    
T  10693162 gctttaagcttccctttttgttgattcctttgctctttattgtttttcca 10693211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 10906928 - 10906977
Alignment:
Q  144 gcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||| |||||||| |||||||||||||||||||||| | ||||| |||||    
T  10906928 gctttaagcttccctttttgttgattcctttgctctttattgtttttcca 10906977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 11901528 - 11901580
Alignment:
Q  147 tcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    ||||||||||||||| ||| ||||| ||| |||| |||||||||||||||||||    
T  11901528 tcaagcttccttttt-gttaattccattgttctcatttgttcttccagaaccta 11901580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 101
Target Start/End: Complemental strand, 17398576 - 17398543
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatca 101  Q
    ||||||||||||||||||||||||||||| ||||    
T  17398576 gcttctgatgaacttgcttctgatgacgtcatca 17398543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 78
Target Start/End: Complemental strand, 19620973 - 19620944
Alignment:
Q  49 cttcagcttctgatgagatgcttctgatga 78  Q
    ||||||||||||||||||||||||||||||    
T  19620973 cttcagcttctgatgagatgcttctgatga 19620944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 101
Target Start/End: Original strand, 22191057 - 22191090
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatca 101  Q
    ||||||||||||||||||||||||||||| ||||    
T  22191057 gcttctgatgaacttgcttctgatgacgtcatca 22191090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 55731959 - 55732036
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatg 92  Q
    ||||||||||||||||||| || |||| ||||||  ||||||||| |  |  || ||||||||| |||||||||||||    
T  55731959 ttgcatctcctgatgaactgcagcttccggtgattctcagcttctaaaaacttgtttctgatgaccttgcttctgatg 55732036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 96
Target Start/End: Original strand, 413221 - 413249
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgt 96  Q
    |||||||||||||||||||||||||||||    
T  413221 gcttctgatgaacttgcttctgatgacgt 413249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 413331 - 413367
Alignment:
Q  157 ttttttgttgattcctttgctctcttttgttcttcca 193  Q
    ||||||||||||||||||||||| | |||||||||||    
T  413331 ttttttgttgattcctttgctctttattgttcttcca 413367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 17247574 - 17247618
Alignment:
Q  149 aagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||| | |||||||||||||||||||||| | |||||||||||    
T  17247574 aagctttcctttttgttgattcctttgctctttgttgttcttcca 17247618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 17700736 - 17700655
Alignment:
Q  19 atctcctgatgaactacaacttctggtgatcttcagcttctgatgagat-gcttctgatgaacttgcttctgatgacgttatca 101  Q
    |||| ||||||| || || |||||||||| |||  |||||||||||  | ||||||||| ||||||||||||||||||| ||||    
T  17700736 atcttctgatgatctgcagcttctggtgaactt--gcttctgatgaacttgcttctgataaacttgcttctgatgacgtcatca 17700655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 19621004 - 19620972
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaact 33  Q
    ||||||||||| |||||||||||||||||||||    
T  19621004 tgaagctttaactcttgcatctcctgatgaact 19620972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 20977648 - 20977707
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    ||||||| ||||||||||||||||||||| ||||  |||| | ||| ||||||||||||||    
T  20977648 gcttctggtgaacttgcttctgatgacgtcatcacttcagaagcac-tttgtcttcaggag 20977707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 36209831 - 36209799
Alignment:
Q  161 ttgttgattcctttgctctcttttgttcttcca 193  Q
    ||||||||||||| |||||||||||||||||||    
T  36209831 ttgttgattccttagctctcttttgttcttcca 36209799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 56034742 - 56034774
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaact 33  Q
    |||||||||||||||||||||| ||||||||||    
T  56034742 tgaagctttaagtcttgcatcttctgatgaact 56034774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 9e-64; HSPs: 78)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 4 - 202
Target Start/End: Original strand, 29693484 - 29693682
Alignment:
Q  4 agctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagc 103  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||      
T  29693484 agctttaagtcttgcatctcctaatgaactacaacttatggtgatcttcagcttatgatgagatgcttctgatgaacttgcttctgatgacgtcatcact 29693583  T
Q  104 tcaggatcac-ttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaat 202  Q
    |||||| ||| ||||||||||| ||| ||| || ||||||||||| |||||||| ||||||||||||||| |||||||||||||||||| || |||||||    
T  29693584 tcaggagcactttttgtcttcaagagcacttctcttcagatgctttaagcttcc-tttttgttgattcctctgctctcttttgttcttctaggacctaat 29693682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 39693701 - 39693900
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||| |||    
T  39693701 tgaagctttaagtcttgcatctcctgatgagctacaacttctggtgatcttcagcttctgatgacatgcttttgatgaacttgtttctgatgacgtcatc 39693800  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||  ||| |||| |||||| || ||| || ||| ||||||| |||||| ||||||||||||||| |||||||||||| ||||||||||||||||    
T  39693801 acttcaggtgcac-tttgacttcagaagcacttctcttcggatgctttaagctt-cttttttgttgattcatttgctctctttcgttcttccagaaccta 39693898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 17914625 - 17914830
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||| ||||||| ||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||     
T  17914625 tgaagctttaactcttgcaactcctaatgagctacaacttctagtgatcttcagcttctgatgagatgcttctgatgaacttgcttctaatgacgtcatt 17914724  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  ||| || ||| |||| ||| ||||| ||| || |||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  17914725 acttcaagagcac-tttgactttaggagcacttctcttcagatgcttcaagcttcc-tttctgttgattcctttgctctcttttattcttccagaaccta 17914822  T
Q  201 atgatgat 208  Q
    || |||||    
T  17914823 ataatgat 17914830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 20382379 - 20382173
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||| |||||||||||||||||||| || ||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||| |||    
T  20382379 tgaagctttaagacttgcatctcctgatgaacttcagcttctggtgatctt--gcttctgatgagatgcttctgatgaacttgcttttgatgacgtcatc 20382282  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| ||| |||| ||||||||| ||| || |||||| ||||||||||||| |||||||||||||| || ||||||||||||||| |||||||||    
T  20382281 acttcaggagcac-tttgacttcaggagcacttctcttcagacgcttcaagcttcc-tttttgttgattccattactctcttttgttctttcagaaccta 20382184  T
Q  201 atgatgatgtc 211  Q
    || | ||||||    
T  20382183 ataaagatgtc 20382173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 17267639 - 17267842
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||| ||||||||| || ||||||||||||||  |||||||||||||||||| |||||||||||||||| || |||| |||    
T  17267639 tgaagctttaagtcttgcatctcttgatgaacttcagcttctggtgatctt--gcttctgatgagatgcttttgatgaacttgcttctaataacgtcatc 17267736  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||| | |||||| | |||||||   ||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  17267737 acttcagaagcacttt-gacttcaggcacacttctcttcagatgcttcaagcttcctttt-tgttgattcctttgctctcttttgttcttccagaaccta 17267834  T
Q  201 atgatgat 208  Q
    || |||||    
T  17267835 ataatgat 17267842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 19943403 - 19943600
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||||||||||||| || ||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| ||| |||    
T  19943403 tgaagctttaagtcttgcatctcctgatgaacttcagcttctagtgatctttagcttctgatgagatgcttctgatgaacttgcttccgatgtcgtcatc 19943502  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| |||| |   ||||||||| ||| || ||||||||||||||||||| ||||| ||||||||| || |||||||||||||||| ||||||||    
T  19943503 acttcaggagcactat--acttcaggagcacttctcttcagatgcttcaagcttcttttttggttgattccattactctcttttgttcttctagaaccta 19943600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 17525713 - 17525510
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgt-tat 99  Q
    ||||| ||||||||||||||||||||||||||||||  |||||||||||||  |||||||||||||||||||||| ||||||||||||||||| ||  ||    
T  17525713 tgaagatttaagtcttgcatctcctgatgaactacagtttctggtgatctt--gcttctgatgagatgcttctgacgaacttgcttctgatgatgtcaat 17525616  T
Q  100 cagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    ||  |||||| |||  ||||||||||||| ||| || |||||||||||||| ||| | |||||||||||| |||||||||||||||||||| |||| |||    
T  17525615 cacttcaggagcac--ttgtcttcaggagcacttcttttcagatgcttcaatctt-catttttgttgatttctttgctctcttttgttctttcagatcct 17525519  T
Q  200 aatgatgat 208  Q
    ||| |||||    
T  17525518 aataatgat 17525510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 16681288 - 16681086
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||| |||||||||||||||||||||||||  | ||||| ||||||||  |||| |||||||||||||||||||||||||||||||||||||| |||    
T  16681288 tgaagctctaagtcttgcatctcctgatgaactttagcttctagtgatctt--gcttatgatgagatgcttctgatgaacttgcttctgatgacgtcatc 16681191  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  ||| || |||||||||||||||||| ||| || |||||| |||| |||||| | ||||||||||||| |||||| ||  ||||||||||||||||||    
T  16681190 acttcatgagcacttttgtcttcaggagcacttctcttcagacgctttaagctt-catttttgttgattcatttgctatc--ttgttcttccagaaccta 16681094  T
Q  201 atgatgat 208  Q
    || |||||    
T  16681093 ataatgat 16681086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 24646504 - 24646700
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||| ||||||||||| |||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  24646504 tgaagctttaactcttgcatctcttgatgaactagagcttctggtgatcttcagcttctgataagatgcttctgatgaacttgcttctgatgacgtcatc 24646603  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||| | |||| |   ||||||||| ||| || |  ||||||||||||||||| |||||||||||||| ||| | ||||||||||||||| ||||||    
T  24646604 acttcagaagcactat--acttcaggagcacttctctctagatgcttcaagcttcc-tttttgttgattccattggtatcttttgttcttccaaaaccta 24646700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 38 - 208
Target Start/End: Complemental strand, 20255516 - 20255348
Alignment:
Q  38 cttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctat 137  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||| ||||  |||||| ||| |||| ||||||||| | | || |    
T  20255516 cttctggtgatcttcagcttctgatgagatacttctgatgaacttccttatgatgacgtcatcacttcaggagcac-tttgacttcaggagcagttctct 20255418  T
Q  138 tcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaatgatgat 208  Q
    ||||| |||| || ||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  20255417 tcagacgctttaaacttcc-tttttgttgattcctttgctctcttttgttgttccagaacctaataatgat 20255348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 22745653 - 22745833
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  22745653 tgaagctttaagtcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgacgacgtcatc 22745752  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |                  ||||| ||| ||| || ||||||  ||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  22745753 a------------------cttcatgagcacttctcttcagacactttaagcttcctttt-tgttgattcctttgctcttttttgttcttccagaaccta 22745833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 33083023 - 33083220
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||  |||||||||||| |||||| |||||||||| |||| ||||||| |||    
T  33083023 tgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatctt--gcttctgatgagttgcttcagatgaacttgtttctaatgacgtcatc 33083120  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctc-ttttgttcttccagaacct 199  Q
    |  ||| || |||||||| ||||| ||| ||| || |||||| |||| |||||| |||||||||||||||| | ||||||  || ||||||||| |||||    
T  33083121 acttcaagagcacttttgacttcaagagcacttctcttcagacgctttaagctt-cttttttgttgattccatagctctcaattcgttcttccaaaacct 33083219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 19156362 - 19156553
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||              ||||||||||||||| || |||    
T  19156362 tgaagctttaattcttgcatctcttgatgaactacaacttctggtgatcttcagcttctgatga--------------acttgcttctgatgatgtcatc 19156447  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| |||||| | ||||||||| ||| || |||||| |||| |||||||||||| ||||||| |||||||||||||||||||||| ||||||||    
T  19156448 acttcaggagcacttt-gacttcaggagcacttctcttcagacgctttaagcttcctttt-tgttgatccctttgctctcttttgttcttctagaaccta 19156545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 3 - 200
Target Start/End: Complemental strand, 17441791 - 17441611
Alignment:
Q  3 aagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcag 102  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||               ||||||| ||||     
T  17441791 aagctttaagtcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgattagatgcttctg---------------atgacgtcatcac 17441707  T
Q  103 ctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
     |||||| ||| |||| ||||||||| ||| || |||||| |||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  17441706 ttcaggagcac-tttgacttcaggagcacttctcttcagacgctttaagcttcc-ttttcgttgattcctttgctctcttttgttcttccagaaccta 17441611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 18121094 - 18120904
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||| ||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||               |||| ||| |||    
T  18121094 tgaaactttaagtcttgcatctcctgatgaactagagcttctggtgatctttagcttctgatgagatgcttct---------------gatggcgtcatc 18121010  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| ||| |||||||||||||| | | || |||| | |||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  18121009 acttcaggagcac-tttgtcttcaggagcagttctcttcaaacgctttaagcttcc-tttttgttgattcatttgctctcttttgttcttccagaaccta 18120912  T

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Target: chr8; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 16207472 - 16207563
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatg 92  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||| |||||||||||||||| |||||||||| ||||    
T  16207472 tgaagctttaagtcttgcatctcctgatgaactagagcttctggtgatctttagcttctaatgagatgcttctgataaacttgcttcagatg 16207563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 19707671 - 19707865
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||| |||| ||||| ||||||| || || ||||||| ||||||  |||||| ||||| ||||||| ||||||||||||||||||| || |||    
T  19707671 tgaagctttaattctttcatcttctgatgatcttcagcttctggcgatctt--gcttctaatgaggtgcttctaatgaacttgcttctgatgatgtcatc 19707768  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| |||  ||  ||||||||| |||  | ||||||| |||||||||||| |||||||||||||| |||| ||| |||||||||||| ||||||    
T  19707769 acttcaggagcac--ttaacttcaggagcacttttcttcagattcttcaagcttcc-tttttgttgattccattgccctcatttgttcttccataaccta 19707865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 22673944 - 22674069
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgatgacgttat 99  Q
    |||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||  |  |||||||||||||||||||||||||||||| ||    
T  22673944 tgaagctttaagt--tgcatctccggatgaactacaacttctggtgatcttcagcttctgataaacttgcttctgatgaacttgcttctgatgacgtcat 22674041  T
Q  100 cagctcaggatcacttttgtcttcaggag 128  Q
    ||  |||||| |||| || ||||||||||    
T  22674042 cacttcaggagcactatt-tcttcaggag 22674069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 16189150 - 16189362
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||||| ||||||| |  ||||||||||||||  |||||| ||||||| ||||||||||||||||||||||||| || |||    
T  16189150 tgaagctttaagtcttgcatctcctaatgaacttcggcttctggtgatctt--gcttctaatgagatacttctgatgaacttgcttctgatgatgtcatc 16189247  T
Q  101 agctc-aggatcacttt----------------tgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttt 183  Q
    | ||| |||| ||||||                || ||||| ||| ||| || |||||| ||||||||||||| ||||||||||||| ||||||||||||    
T  16189248 a-ctctaggagcacttttacttcaagagcactgtgacttcaagagcacttctcttcagacgcttcaagcttcc-tttttgttgattcatttgctctcttt 16189345  T
Q  184 tgttcttccagaaccta 200  Q
    |||||||||||||||||    
T  16189346 tgttcttccagaaccta 16189362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 177
Target Start/End: Original strand, 17797600 - 17797763
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatg-agatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcac 113  Q
    |||||||||||||||| || || ||||||||||| |||||||||||||| |  ||||||||||||| |||||||||||||||| | ||  |||||| |||    
T  17797600 ttgcatctcctgatgagctgcagcttctggtgattttcagcttctgatgaacttgcttctgatgaatttgcttctgatgacgtcaccatttcaggagcac 17797699  T
Q  114 ttttgtcttcaggagaactgctattcagatgcttcaagcttcc--ttttttgttgattcctttgct 177  Q
     |||||||||||||| | |  | ||||||||||| ||||||||  |||||||||||||||||||||    
T  17797700 -tttgtcttcaggagcagt-tttttcagatgctttaagcttccttttttttgttgattcctttgct 17797763  T

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Target: chr8; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 21933049 - 21933263
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatg-agatgcttctgatgaacttgcttctgatgacgttat 99  Q
    ||||||||||||||||||||||||||||||| || | ||||||||||| |||||||||||||| |  |||||||||| ||||| ||||||||||||| |     
T  21933049 tgaagctttaagtcttgcatctcctgatgaaatagagcttctggtgattttcagcttctgatgaacttgcttctgataaacttccttctgatgacgtcac 21933148  T
Q  100 cagctcaggatcact----------------tttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttt 183  Q
    ||  |||||| ||||                |||| ||||||||| | | || |||||| |||| |||||||| |||||||||||||||||||||||| |    
T  21933149 cacttcaggagcactttgtcttcaagagcactttgacttcaggagcagttctcttcagacgctttaagcttcc-tttttgttgattcctttgctctctat 21933247  T
Q  184 tgttcttccagaacct 199  Q
    ||||||||||||||||    
T  21933248 tgttcttccagaacct 21933263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 199
Target Start/End: Complemental strand, 23263589 - 23263389
Alignment:
Q  8 ttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagctcag 107  Q
    |||||| ||||||||||||||||||| || |||||| |||||||  |||||||||||| |||||||||||||||||||||||||||||| ||||  ||||    
T  23263589 ttaagttttgcatctcctgatgaacttcagcttctgatgatctt--gcttctgatgaggtgcttctgatgaacttgcttctgatgacgtcatcacttcag 23263492  T
Q  108 gatcacttttgtcttcaggagaactgctattcagatg--cttcaagcttcct----------tttttgttgattcctttgctctcttttgttcttccaga 195  Q
    || | |||||  ||||||||| ||| || |||||| |  ||| |||||||||          |||||||||||| | ||||||||||||||||||| |||    
T  23263491 gagcgctttt-acttcaggagcacttctcttcagaagcactttaagcttccttttggttttctttttgttgatttcattgctctcttttgttcttcgaga 23263393  T
Q  196 acct 199  Q
    ||||    
T  23263392 acct 23263389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 18321144 - 18321067
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatga 78  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||  ||||||||||||||||||||||||    
T  18321144 tgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatcttctacttctgatgagatgcttctgatga 18321067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 3598331 - 3598206
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatg-agatgcttctgatgaacttgcttctgatgacgttat 99  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||  ||||||||||||| |  ||||| |||||| ||||||||||| ||||| ||    
T  3598331 tgaagctttaagt--tgcatctcctgatgaactacaacttctggtgattctcagcttctgatgaacttgcttatgatgaccttgcttctgacgacgtcat 3598234  T
Q  100 cagctcaggatcacttttgtcttcaggag 128  Q
    ||  |||||| ||| ||||||||||||||    
T  3598233 cacttcaggagcac-tttgtcttcaggag 3598206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 179
Target Start/End: Original strand, 18680031 - 18680140
Alignment:
Q  67 tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttg 166  Q
    |||||||||||||||||||||||||||||| ||||  |||||| ||| |||| ||||||||| ||| || ||||||||||| |||||||| |||||||||    
T  18680031 tgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcac-tttgacttcaggagcact-ctcttcagatgcttaaagcttcc-tttttgttg 18680127  T
Q  167 attcctttgctct 179  Q
    ||||||| |||||    
T  18680128 attccttagctct 18680140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 36105361 - 36105453
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgatgac 94  Q
    |||||||||||||  ||||||||||||||||||| | ||||||||||| |||||||||||||  |  ||||||||||||||||||||||||||||    
T  36105361 tgaagctttaagt--tgcatctcctgatgaactatagcttctggtgattttcagcttctgataaacttgcttctgatgaacttgcttctgatgac 36105453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 17701911 - 17701997
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttc 87  Q
    |||||||||||||||  ||||| |||||||||| || |||||||||||| || |||||||| ||| |||||||||||||||||||||    
T  17701911 tgaagctttaagtctctcatcttctgatgaacttcagcttctggtgatcatctgcttctgaagaggtgcttctgatgaacttgcttc 17701997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 43639940 - 43640065
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagat-gcttctgatgaacttgcttctgatgacgttat 99  Q
    |||||||||||||  |||||||| ||||||||| || |||||||||||   |||||||||||||  | ||||||||||||||||||||||||||||| ||    
T  43639940 tgaagctttaagt--tgcatctcatgatgaactgcatcttctggtgatacacagcttctgatgattttgcttctgatgaacttgcttctgatgacgtcat 43640037  T
Q  100 cagctcaggatcacttttgtcttcaggag 128  Q
    ||  ||| || ||| ||||||||||||||    
T  43640038 cacttcatgagcac-tttgtcttcaggag 43640065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 202
Target Start/End: Complemental strand, 602652 - 602521
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    |||| |||||||||||||||||||||||| ||||  |||||| ||||   | |||||| |   || || || ||| ||||||| |||||||||| |||||    
T  602652 gcttttgatgaacttgcttctgatgacgtcatcacttcaggagcacta--gacttcagcaacgcttctctttagacgcttcaaacttccttttt-gttga 602556  T
Q  168 ttcctttgctctcttttgttcttccagaacctaat 202  Q
    |||||| ||||||||||||||||||||||||||||    
T  602555 ttccttagctctcttttgttcttccagaacctaat 602521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 16207556 - 16207617
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    ||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||    
T  16207556 ttcagatgcttcaagattcctttt-tgttgattcatttgctctcttttgttcttccagaacct 16207617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 120 - 202
Target Start/End: Complemental strand, 18321058 - 18320977
Alignment:
Q  120 cttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaat 202  Q
    ||||||||| ||| || ||||||||||||||||||| ||||||||||||||| | ||| ||||||||||||||||||| ||||    
T  18321058 cttcaggagcacttctcttcagatgcttcaagcttc-ttttttgttgattccatagctatcttttgttcttccagaacgtaat 18320977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 22663282 - 22663371
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgat 91  Q
    |||||||||||||  |||||||||| |||||||||||||||| |||||||||||||||| ||  |  |||||||||||||||||| ||||||    
T  22663282 tgaagctttaagt--tgcatctcctaatgaactacaacttctagtgatcttcagcttctaataaacttgcttctgatgaacttgcatctgat 22663371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 12757742 - 12757687
Alignment:
Q  7 tttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat 62  Q
    |||||||||||||||||||||||||||| | || ||||||||||||||||||||||    
T  12757742 tttaagtcttgcatctcctgatgaactagagctactggtgatcttcagcttctgat 12757687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 15336073 - 15335981
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgatgac 94  Q
    |||||||||||||  ||||||||||||||||||||| |||||||||||  ||||||||||||  |  ||||||||||||  ||||||||||||||    
T  15336073 tgaagctttaagt--tgcatctcctgatgaactacagcttctggtgattctcagcttctgataaacttgcttctgatgactttgcttctgatgac 15335981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 15425138 - 15425046
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgatgac 94  Q
    |||||||||||||  ||||||||||||||||||||| |||||||||||  ||||||||||||  |  ||||||||||||  ||||||||||||||    
T  15425138 tgaagctttaagt--tgcatctcctgatgaactacagcttctggtgattctcagcttctgataaacttgcttctgatgactttgcttctgatgac 15425046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 15516442 - 15516350
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgatgac 94  Q
    |||||||||||||  ||||||||||||||||||||| |||||||||||  ||||||||||||  |  ||||||||||||  ||||||||||||||    
T  15516442 tgaagctttaagt--tgcatctcctgatgaactacagcttctggtgattctcagcttctgataaacttgcttctgatgactttgcttctgatgac 15516350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 17702005 - 17702091
Alignment:
Q  115 tttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaat 202  Q
    |||| |||||| || ||| || |||||||||||||||||||||||| |||||||||| |  |||||||||||| ||||||||||||||    
T  17702005 tttgacttcagaagcacttctcttcagatgcttcaagcttcctttt-tgttgattccataactctcttttgttattccagaacctaat 17702091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 40845360 - 40845248
Alignment:
Q  16 tgcatctcctgatgaactacaacttctggtga-tcttcagcttctgatgagat-gcttctgatgaacttgcttctgatgacgttatcagctcaggatcac 113  Q
    ||||||||||||||||||| | |||||||||| |||| |||||||||| |  | ||||||||||| ||||||||||||||||| ||||  |||||| |||    
T  40845360 tgcatctcctgatgaactatagcttctggtgagtctt-agcttctgataaacttgcttctgatgaccttgcttctgatgacgtcatcacttcaggagcac 40845262  T
Q  114 ttttgtcttcaggag 128  Q
     ||||||||||||||    
T  40845261 -tttgtcttcaggag 40845248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 1237969 - 1238025
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    ||||||||||| |||||||| |||||||||||||||||||||| | |||||||||||    
T  1237969 ttcagatgctttaagcttccctttttgttgattcctttgctctttattgttcttcca 1238025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 21541289 - 21541345
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    ||||||||||| | |||||  ||||||||||||||||||||||||||||||||||||    
T  21541289 ttcagatgctttaggcttctctttttgttgattcctttgctctcttttgttcttcca 21541345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 23185199 - 23185150
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||||||||||| || ||||||||||| |||||||||||||||    
T  23185199 ttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatga 23185150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 22461480 - 22461418
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |||||| | ||||||||||||| || ||||||||| |||||||||||||||||| |||||||||    
T  22461480 ttcagacgtttcaagcttccttctt-gttgattccattgctctcttttgttcttacagaaccta 22461418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 9320748 - 9320830
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagat-gcttctgatgaacttgcttctgatgacgt 96  Q
    |||||||  |||||||||| || ||||||||||| || |||||||||| |  | |||||||||||||| ||||||||||||||    
T  9320748 ttgcatcctctgatgaactgcagcttctggtgatttttagcttctgataaacttgcttctgatgaactcgcttctgatgacgt 9320830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 193
Target Start/End: Complemental strand, 30421314 - 30421237
Alignment:
Q  115 tttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||||||||||| | |  | |||||| |||| ||||||||||||| ||| ||||||||||||||| |||||||||||    
T  30421314 tttgtcttcaggagcagttttgttcagacgctttaagcttccttttt-gttaattcctttgctctctattgttcttcca 30421237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 18730939 - 18730861
Alignment:
Q  21 ctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatca 101  Q
    |||||||||||  ||| ||||||| ||| |  ||||||||||||  |||||||||| ||||||||||||||||||| ||||    
T  18730939 ctcctgatgaaagacagcttctggggatgt--agcttctgatgaagtgcttctgatcaacttgcttctgatgacgtcatca 18730861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 21541125 - 21541201
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagat-gcttctgatgaacttgcttctgatga 93  Q
    |||||||||||||||||||| |  |||||||||| | ||||||||||||| || ||||   |||||||||||||||||||    
T  21541125 ttgcatctcctgatgaactatagtttctggtgatatacagcttctgatgaaatagctt---atgaacttgcttctgatga 21541201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 36105441 - 36105501
Alignment:
Q  67 tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    |||||||||||| ||||||||||||||||| ||||  |||||| ||| ||||||||||||||    
T  36105441 tgcttctgatgaccttgcttctgatgacgtcatcacttcaggagcac-tttgtcttcaggag 36105501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 43774053 - 43774134
Alignment:
Q  22 tcctgatgaactacaacttctggtgatcttcagcttctgatg-agatgcttctgatgaac-ttgcttctgatgacgttatca 101  Q
    ||||||||||||||| |||||||||||    ||||||||||| |  |||||||||||||| |||||||||||||||| ||||    
T  43774053 tcctgatgaactacagcttctggtgatacatagcttctgatgaacttgcttctgatgaactttgcttctgatgacgtcatca 43774134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 45538373 - 45538249
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    |||| |||| |||| |||||||||||||| | ||  |||||| | ||||  |||||||||| | |  | |||||| |||| |||||||| ||||||||||    
T  45538373 gcttatgataaactcgcttctgatgacgtcaccacttcaggagcgcttta-tcttcaggagcagttttcttcagacgctttaagcttccctttttgttga 45538275  T
Q  168 ttcctttgctctcttttgttcttcca 193  Q
    || ||||||||| | |||||||||||    
T  45538274 tttctttgctctttattgttcttcca 45538249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 184
Target Start/End: Original strand, 2811037 - 2811168
Alignment:
Q  53 agcttctgatgaga-tgcttctgatgaactt--gcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttca 149  Q
    |||||||||||||  |||||||||||| |||  |||||||||||||| ||||  |||||| | || | ||||||| ||  ||| || ||||||||||| |    
T  2811037 agcttctgatgaggctgcttctgatgagcttcagcttctgatgacgtcatcacttcaggagcgctat-gtcttcatgaacacttctcttcagatgcttta 2811135  T
Q  150 agcttccttttttgttgattcctttgctctctttt 184  Q
    |||||||  ||||||||||| ||||||||| ||||    
T  2811136 agcttcc--ttttgttgatttctttgctctttttt 2811168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 9320887 - 9320943
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||| |||| || ||||| |||||||||||||||||||||| | |||||||||||    
T  9320887 ttcagacgctttaatcttccctttttgttgattcctttgctctttattgttcttcca 9320943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 13430570 - 13430511
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    ||||||||||||||||||||||||||||| || |  |||||| ||| ||||||||||||||    
T  13430570 gcttctgatgaacttgcttctgatgacgtcattacttcaggagcac-tttgtcttcaggag 13430511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 14989394 - 14989335
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    ||||||||||||||||||||||||||||| ||||  | |||| ||| ||||||||||||||    
T  14989394 gcttctgatgaacttgcttctgatgacgtcatcactttaggagcac-tttgtcttcaggag 14989335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 15335880 - 15335836
Alignment:
Q  149 aagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||||| |||||||||||||||||||||| | |||||||||||    
T  15335880 aagcttccctttttgttgattcctttgctctttattgttcttcca 15335836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 15424945 - 15424901
Alignment:
Q  149 aagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||||| |||||||||||||||||||||| | |||||||||||    
T  15424945 aagcttccctttttgttgattcctttgctctttattgttcttcca 15424901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 15516249 - 15516205
Alignment:
Q  149 aagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||||| |||||||||||||||||||||| | |||||||||||    
T  15516249 aagcttccctttttgttgattcctttgctctttattgttcttcca 15516205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 17518872 - 17518840
Alignment:
Q  161 ttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||||||||||||||||||||||||||||||    
T  17518872 ttgttgattcctttgctctcttttgttcttcca 17518840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 18151599 - 18151551
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttt 116  Q
    ||||||||||||||||||||||||||||| ||||  |||||| ||||||    
T  18151599 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttt 18151551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 18151650 - 18151589
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||  ||||||| |||||||||| ||||||||||||||   |||||||||||||    
T  18151650 tgaagctttaagt--tgcatcttctgatgaactgcaacttctggtgattcacagcttctgatga 18151589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 21288611 - 21288670
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    ||||||||||||||||||||||||||||| ||||  |||| | ||||||| ||||||||||    
T  21288611 gcttctgatgaacttgcttctgatgacgtcatcacttcagaagcactttt-tcttcaggag 21288670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 24832905 - 24832849
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||| |||| |||||||| |||||||||||| ||||||||| | |||||||||||    
T  24832905 ttcagacgctttaagcttccctttttgttgatttctttgctctttattgttcttcca 24832849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 28903782 - 28903838
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    ||||||||||| | | |||  || |||||||||||||||||||||||||||||||||    
T  28903782 ttcagatgctttaggtttctcttcttgttgattcctttgctctcttttgttcttcca 28903838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 40003508 - 40003564
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    ||||||||||| | | |||  || |||||||||||||||||||||||||||||||||    
T  40003508 ttcagatgctttaggtttctcttcttgttgattcctttgctctcttttgttcttcca 40003564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 43645132 - 43645196
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctc-tcttttgttcttccagaaccta 200  Q
    ||||||||||||||||||| ||||||||||||||| | |||| |  |||||||||||| ||||||    
T  43645132 ttcagatgcttcaagcttctttttttgttgattccatagctcttaatttgttcttccataaccta 43645196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 6407934 - 6407992
Alignment:
Q  69 cttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    |||||||||||||||||| ||||||||| ||||  |||||| ||| ||||||||||||||    
T  6407934 cttctgatgaacttgcttttgatgacgtcatcacttcaggagcac-tttgtcttcaggag 6407992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 193
Target Start/End: Original strand, 8032357 - 8032387
Alignment:
Q  163 gttgattcctttgctctcttttgttcttcca 193  Q
    |||||||||||||||||||||||||||||||    
T  8032357 gttgattcctttgctctcttttgttcttcca 8032387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 193
Target Start/End: Complemental strand, 18534875 - 18534845
Alignment:
Q  163 gttgattcctttgctctcttttgttcttcca 193  Q
    |||||||||||||||||||||||||||||||    
T  18534875 gttgattcctttgctctcttttgttcttcca 18534845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 179
Target Start/End: Original strand, 18719203 - 18719308
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    ||||||| ||| ||||||||||||||||| ||||  |||| |     |||| ||||||||| ||| || ||||||||||| |||||||| ||||||||||    
T  18719203 gcttctggtgatcttgcttctgatgacgtcatcacttcagaac----tttgacttcaggagcact-ctcttcagatgcttaaagcttcc-tttttgttga 18719296  T
Q  168 ttcctttgctct 179  Q
    |||||| |||||    
T  18719297 ttccttagctct 18719308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 197
Target Start/End: Complemental strand, 19956256 - 19956142
Alignment:
Q  81 ttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcct-ttgctct 179  Q
    |||||||||||||||| ||||  |||||| |||||  |||||||| | | ||  | |||||| |||||||| |||||| || |||||||||  |||||||    
T  19956256 ttgcttctgatgacgtcatcacttcaggagcactt--gtcttcagaacatctttttttcagacgcttcaagtttccttctt-gttgattccaattgctct 19956160  T
Q  180 cttttgttcttccagaac 197  Q
    | ||||||||||||||||    
T  19956159 catttgttcttccagaac 19956142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 101
Target Start/End: Original strand, 1745368 - 1745401
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatca 101  Q
    ||||||||||||||||||||||||||||| ||||    
T  1745368 gcttctgatgaacttgcttctgatgacgtcatca 1745401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 101
Target Start/End: Complemental strand, 18722594 - 18722516
Alignment:
Q  21 ctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatca 101  Q
    |||||||||||  ||| ||||||| ||| |  ||||||||||||  |||||||||| ||||||||||| ||||||| ||||    
T  18722594 ctcctgatgaaagacagcttctggggatgt--agcttctgatgaagtgcttctgatcaacttgcttctaatgacgtgatca 18722516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 19927353 - 19927402
Alignment:
Q  144 gcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||| |||||||| ||||||||| |||||||||||| | |||||||||||    
T  19927353 gctttaagcttccctttttgttggttcctttgctctttattgttcttcca 19927402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 29379890 - 29379947
Alignment:
Q  137 ttcagatgcttcaagcttcctttt-ttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||||||||| || || || || |||||||||||||| ||||||||||||||||||    
T  29379890 ttcagatgcttctaggtttctcttcttgttgattcctttactctcttttgttcttcca 29379947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 30421401 - 30421352
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||| |||||||||| || ||||||||||| || ||||||||||||    
T  30421401 ttgcatcttctgatgaactgcagcttctggtgattttgagcttctgatga 30421352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 6407882 - 6407927
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgat 48  Q
    |||||||||||||  |||||||||||||||||| || |||||||||||    
T  6407882 tgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 6407927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 14989445 - 14989384
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||  |||||||||||||||| | || |||||||||||   |||||||||||||    
T  14989445 tgaagctttaagt--tgcatctcctgatgaattgcagcttctggtgattcacagcttctgatga 14989384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 18719167 - 18719228
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||| |||||||||||||| |||| |||||  | ||||||||||||||  |||||||||||    
T  18719167 tgaagctctaagtcttgcatcttctgaagaacttaagcttctggtgatctt--gcttctgatga 18719228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 24551521 - 24551580
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    |||| ||||||||| |||||||||||||| ||||  |||||| ||| ||||||||||||||    
T  24551521 gcttatgatgaactcgcttctgatgacgtcatcacttcaggagcac-tttgtcttcaggag 24551580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 18558 - 18359
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||| |||||  |||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||    
T  18558 tgaagctttaaatcttgtgtctcctgatgaactgcagcttctggtgatcttcagcttatgatgagatgcttctgatgaacttgcttctgatgacgtcatc 18459  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  ||| || ||| |||| ||||||||| ||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  18458 acttcatgagcac-tttgacttcaggagcacttctcttcagatgcttcaagcttcc-tttttgttgattcctttgctctcttttgttcttccaaaaccta 18361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 6e-62; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 17815138 - 17815342
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||| ||||||| |  | ||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||| |||    
T  17815138 tgaagctttaagtcttgcatctcttgatgaaatttagcttctggtgatctt--gcttctgatgagatgcttctgatgaacttgctactgatgacgtcatc 17815235  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| |||||||||||||||||| ||| || |||||||| || |||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  17815236 acttcaggagcacttttgtcttcaggagcacttctcttcagatgttttaagcttcc-tttttgttgattcctttactctcttttgttcttccagaaccta 17815334  T
Q  201 atgatgat 208  Q
    || |||||    
T  17815335 ataatgat 17815342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 19536267 - 19536093
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||||||||||||| |  ||||| | ||||||  ||||||||||||||||||||||||||||| ||||||||||||| |||    
T  19536267 tgaagctttaagtcttgcatctcctgatgaacttctgcttcttgcgatctt--gcttctgatgagatgcttctgatgaacttacttctgatgacgtcatc 19536170  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctct 179  Q
    |  |||||| ||| ||||| |||||||||||| || || ||||||||||||||| | |||||||||||||||| |||||    
T  19536169 acttcaggagcac-tttgtgttcaggagaacttctctttagatgcttcaagctttc-tttttgttgattccttagctct 19536093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 3 - 208
Target Start/End: Original strand, 26784526 - 26784716
Alignment:
Q  3 aagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcag 102  Q
    ||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||              ||||||||||||||||||||||||| || |     
T  26784526 aagctttaaatcttgcatctcctgctgaactacagcttctggtgatcttcagctt--------------ctgatgaacttgcttctgatgacgtcatgac 26784611  T
Q  103 ctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaat 202  Q
     ||| || |||||||||||||||||| ||| || |||||| |||| |||||||| |||||||||||||||||||||||||||||||||| ||| ||||||    
T  26784612 ttcatgagcacttttgtcttcaggagcacttctcttcagacgctttaagcttcc-tttttgttgattcctttgctctcttttgttcttcaagagcctaat 26784710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 68 - 208
Target Start/End: Original strand, 21910762 - 21910901
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    ||||||| ||| ||||||||||||||||| ||||  ||| || |||||||||||||||||| ||| || |||||| |||| |||||||| ||||||||||    
T  21910762 gcttctggtgatcttgcttctgatgacgtcatcacttcatgagcacttttgtcttcaggagcacttctcttcagacgctttaagcttcc-tttttgttga 21910860  T
Q  168 ttcctttgctctcttttgttcttccagaacctaatgatgat 208  Q
    ||| |||||||||||||||||||| |||||||||| |||||    
T  21910861 ttcatttgctctcttttgttcttctagaacctaataatgat 21910901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 642675 - 642517
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||  ||||| |||||||||| ||| ||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||| |||    
T  642675 tgaagctttaagtctctcatcttctgatgaactgcaatttctggtgatcttcagcatctcatgaggtgcttctgatgaacttgcttctgatgacgtcatc 642576  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttt 161  Q
    |  |||| | |||  ||| ||||||||  |||  | |||||| ||||||||||||||||||    
T  642575 acttcagaagcac--ttgacttcaggatcacttttcttcagacgcttcaagcttccttttt 642517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 21072206 - 21072131
Alignment:
Q  3 aagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatga 78  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  21072206 aagctttaagtcttgcatctcctgatgaacttcagcttctggtgatcttcagcttctgatgagatgcttctgatga 21072131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 23881237 - 23881434
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||| ||||  ||||| |||||||||| || ||||||||| |||||||||||||||||| |||||||||||| |||||||||||||| || |||    
T  23881237 tgaagcttta-gtctctcatcttctgatgaacttcagcttctggtgttcttcagcttctgatgaggtgcttctgatgaccttgcttctgatgatgtcatc 23881335  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| ||   | | ||||| ||| |||  | |||||| ||||||||||| | || ||||||||||| ||||| ||||||||||||| ||||||||    
T  23881336 acttcaggagca--gtagacttcaagagcacttttcttcagacgcttcaagctt-cattcttgttgattccattgctatcttttgttcttctagaaccta 23881432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 21099672 - 21099475
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||   |||| ||||||||||  | ||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||| |||    
T  21099672 tgaagctttaagtctctgatcttctgatgaactttagcttctggtgattttcagcttctgatgaggtgcttttgatgaacttgcttctgatgacgtcatc 21099573  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctc-tcttttgttcttccagaacct 199  Q
    |  |||||| |||  ||| ||||| ||| |||  | |||||| ||||||||| ||| |||||||||||||| | |||| |  |||||||||||| |||||    
T  21099572 acttcaggagcac--ttgacttcatgagcacttttcttcagacgcttcaagcctcc-tttttgttgattccatggctcttaatttgttcttccaaaacct 21099476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 20551149 - 20551229
Alignment:
Q  120 cttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    ||||||||| ||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20551149 cttcaggagcacttctcttcagatgcttcaagcttccttttttgttgattccattgctctcttttgttcttccagaaccta 20551229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 29138363 - 29138210
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcac 113  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||  |  |||||||||||||||||||||||||||||| ||||   ||||| |||    
T  29138363 ttgcatctcctgatgaactacaacttctggtgattctcagcttctgataaacttgcttctgatgaacttgcttctgatgacgtcatcactacaggagcac 29138264  T
Q  114 ttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgat 168  Q
     |||||||||||||  | |  | |||||| |||| |||||||| |||||||||||    
T  29138263 -tttgtcttcaggaacagttttcttcagacgctttaagcttccatttttgttgat 29138210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 41566401 - 41566338
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41566401 tgaagctttaagtcttgcatctcctgatgaactacaacttctgatgatcttcagcttctgatga 41566338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 202
Target Start/End: Complemental strand, 89352 - 89221
Alignment:
Q  69 cttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgat 168  Q
    |||||| ||| ||||||||||||||||| ||||  |||| | |||||| | |||||| || ||| || ||||||  ||||||||||||||||| ||||||    
T  89352 cttctggtgatcttgcttctgatgacgtcatcacttcagtagcacttt-gacttcagaagcacttctcttcagacacttcaagcttccttttt-gttgat 89255  T
Q  169 tcctttgctctcttttgttcttccagaacctaat 202  Q
    ||||| ||||||||||||||||||||||||||||    
T  89254 tccttagctctcttttgttcttccagaacctaat 89221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 7745660 - 7745569
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgac 94  Q
    |||||||||||||||| |||||||||||| ||| || ||||| ||||||||  |||||||||||||||||| |||||||||||||||| |||||    
T  7745660 tgaagctttaagtcttacatctcctgatgtacttcagcttcttgtgatctt--gcttctgatgagatgcttttgatgaacttgcttcttatgac 7745569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 120 - 202
Target Start/End: Complemental strand, 23412856 - 23412775
Alignment:
Q  120 cttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaat 202  Q
    ||||||||| ||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||    
T  23412856 cttcaggagcacttctcttcagatgcttcaagcttccttttt-gttgattccattgctctcttttgctcttccagaacctaat 23412775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 12352758 - 12352690
Alignment:
Q  28 tgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgt 96  Q
    |||||| || |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  12352758 tgaacttcagcttctggtgatcttcagcttctgatgagatgcttttgatgaacttgcttttgatgacgt 12352690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 26759319 - 26759411
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgatgac 94  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||  ||||||||||||  |  ||||||||||||| ||||||||||||||    
T  26759319 tgaagctttaagt--tgcatctcctgatgaactacaacttctggtgattctcagcttctgataaatttgcttctgatgaatttgcttctgatgac 26759411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 4887243 - 4887367
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    |||||| |||||||||||||||||||||| ||||  |||||| ||||||  |||| ||||  | |  | |||||| |||| |||||||| ||||||||||    
T  4887243 gcttctaatgaacttgcttctgatgacgtcatcacttcaggagcacttta-tctttaggaacagttttcttcagacgctttaagcttccctttttgttga 4887341  T
Q  168 ttcctttgctctcttttgttcttcca 193  Q
    |||||||||||||| |||||||||||    
T  4887342 ttcctttgctctctattgttcttcca 4887367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 89389 - 89328
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||    
T  89389 tgaagctttaagttttgcatctcctgatgaactacaacttctggtgatctt--gcttctgatga 89328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 69 - 193
Target Start/End: Original strand, 5430106 - 5430228
Alignment:
Q  69 cttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgat 168  Q
    |||||||||||||||||||||||||||| | ||  |||| | ||| |||||||||||||| |||  | ||| || |||| |||||||| |||||||||||    
T  5430106 cttctgatgaacttgcttctgatgacgtcaccacttcagaagcac-tttgtcttcaggagcacttttcttcggacgctttaagcttcc-tttttgttgat 5430203  T
Q  169 tcctttgctctcttttgttcttcca 193  Q
    ||||||||||| | |||||||||||    
T  5430204 tcctttgctctttattgttcttcca 5430228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 6512398 - 6512337
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||    
T  6512398 tgaagctttaagtcttgcatctcctgatgaactacaacttctagtgatctt--gcttctgatga 6512337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 32160949 - 32161037
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgatgacgttatcag 102  Q
    |||||||| |||||||||||||  |||||||||| | ||||||||||| ||  |||||||||||||||||||||||||||||| |||||    
T  32160949 ttgcatcttctgatgaactacagtttctggtgatatacagcttctgatagacttgcttctgatgaacttgcttctgatgacgtcatcag 32161037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 42243851 - 42243976
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgatgacgttat 99  Q
    |||||||||||||  ||||||||||||||||||||| |||||||||||  |||| || ||||  |  |||||||||||| ||||| ||||||||||| ||    
T  42243851 tgaagctttaagt--tgcatctcctgatgaactacagcttctggtgattctcagtttttgataaatttgcttctgatgaccttgcatctgatgacgtcat 42243948  T
Q  100 cagctcaggatcacttttgtcttcaggag 128  Q
    ||  |||||| || |||||||||||||||    
T  42243949 cacttcaggagca-ttttgtcttcaggag 42243976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23412941 - 23412891
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatctt 51  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  23412941 tgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatctt 23412891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 128
Target Start/End: Complemental strand, 35986192 - 35986083
Alignment:
Q  19 atctcctgatgaactacaacttctggtgatcttcagcttctgatg-agatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcactttt 117  Q
    ||||||||||||||| ||||||||||||||   |||||||||||| |  ||||||||||||| | |||||||||||||| ||||  |||| | ||| |||    
T  35986192 atctcctgatgaactgcaacttctggtgattcacagcttctgatgaacttgcttctgatgaattagcttctgatgacgtcatcacttcagaagcac-ttt 35986094  T
Q  118 gtcttcaggag 128  Q
    |||||||||||    
T  35986093 gtcttcaggag 35986083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 21072089 - 21072025
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaat 202  Q
    |||||| |||||||||||||||||| ||||||||||| ||||| |||||||||| |||||||||||    
T  21072089 ttcagacgcttcaagcttccttttt-gttgattccttagctcttttttgttctttcagaacctaat 21072025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 33022885 - 33023008
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    ||||||||||||||||||||||||||||| | ||  |||  | |||||| ||||||||||| | |  | |||||| | || |||||||||||| ||||||    
T  33022885 gcttctgatgaacttgcttctgatgacgtcaccacttcaaaagcacttt-gtcttcaggagcagtttttttcagacgttttaagcttcctttt-tgttga 33022982  T
Q  168 ttcctttgctctcttttgttcttcca 193  Q
    |||||||||||||  |||||||||||    
T  33022983 ttcctttgctctcgattgttcttcca 33023008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 200
Target Start/End: Complemental strand, 7745508 - 7745433
Alignment:
Q  124 aggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    ||||| ||| || |||||| |||||||||||||||||| |||||| | ||||||||||||||||||| |||||||||    
T  7745508 aggagcacttctcttcagacgcttcaagcttccttttt-gttgatccatttgctctcttttgttctttcagaaccta 7745433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 20551096 - 20551148
Alignment:
Q  49 cttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatca 101  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||| ||||    
T  20551096 cttcagcttctgatgagatgcttctaatgagcttgcttctgatgacgtcatca 20551148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 23478678 - 23478734
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    ||||||||||| | |||||  ||||||||||||||||||||||||||||||||||||    
T  23478678 ttcagatgctttaggcttctctttttgttgattcctttgctctcttttgttcttcca 23478734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 9398712 - 9398649
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||| ||||||||||  ||||| |||||||||| ||||||||||||||||| ||||||||||||    
T  9398712 tgaacctttaagtctctcatcttctgatgaacttcaacttctggtgatcttgagcttctgatga 9398649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 191
Target Start/End: Complemental strand, 14086453 - 14086332
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    |||| |||| ||||||||||||||||| | ||||  |||||| |||||| ||||||||||| | |  | |||| | |||| ||||||||||||| |||||    
T  14086453 gcttttgataaacttgcttctgatgacatcatcacttcaggagcacttt-gtcttcaggagcagttttcttcatacgctttaagcttccttttt-gttga 14086356  T
Q  168 ttcctttgctctcttttgttcttc 191  Q
    |||||||||||| | |||||||||    
T  14086355 ttcctttgctctttattgttcttc 14086332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 30743150 - 30743242
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagat-gcttctgatgaacttgcttctgatgac 94  Q
    |||||||||||||  |||||||||||||||||| |||||||| || ||  ||||||| |||| |  | |||||||||||||||||||||||||||    
T  30743150 tgaagctttaagt--tgcatctcctgatgaactgcaacttctcgtaattctcagcttatgataaatttgcttctgatgaacttgcttctgatgac 30743242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 12352684 - 12352608
Alignment:
Q  120 cttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctc-ttttgttcttccagaa 196  Q
    ||||||||| ||| || ||||||||||||||||||||| ||||||||||||| | ||||||  |||||||||||||||    
T  12352684 cttcaggagcacttctcttcagatgcttcaagcttcct-ttttgttgattccatagctctcaatttgttcttccagaa 12352608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 33022846 - 33022895
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  33022846 ttgcatctcctgatgaactgcaaattctggtgattttcagcttctgatga 33022895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 11994219 - 11994275
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    ||||||||||| |||||||| ||||||||||||||||||||||   |||||||||||    
T  11994219 ttcagatgctttaagcttccctttttgttgattcctttgctcttaattgttcttcca 11994275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 21910730 - 21910787
Alignment:
Q  5 gctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||||||||||||||||||  | ||||||||||||||  |||||||||||    
T  21910730 gctttaagtcttgcatctcctgatgaactttagcttctggtgatctt--gcttctgatga 21910787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 6512284 - 6512226
Alignment:
Q  149 aagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaatgatgat 208  Q
    ||||||||||||| |||||||| |||||| ||||||||||||| |||||||||| |||||    
T  6512284 aagcttccttttt-gttgattcatttgctatcttttgttcttcaagaacctaataatgat 6512226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15517139 - 15517198
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat 62  Q
    |||||||||||||  ||||||| |||||||||||||||||||||||||  ||| ||||||||    
T  15517139 tgaagctttaagt--tgcatcttctgatgaactacaacttctggtgattctcaacttctgat 15517198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 25096723 - 25096661
Alignment:
Q  54 gcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttt 116  Q
    |||||||| | | |||||||||||||||||||||||||||||| ||||  |||||| ||||||    
T  25096723 gcttctgacggggtgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttt 25096661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 25154693 - 25154631
Alignment:
Q  54 gcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttt 116  Q
    |||||||| | | |||||||||||||||||||||||||||||| ||||  |||||| ||||||    
T  25154693 gcttctgacggggtgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttt 25154631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 30115792 - 30115666
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    ||||||||||||||||||||| ||||||| ||||  |||||| |||||    ||||||||| | |  | |||||| |||| |||||||| ||||||||||    
T  30115792 gcttctgatgaacttgcttctaatgacgtcatcacttcaggagcacttcaaacttcaggagcagttttcttcagacgctttaagcttccctttttgttga 30115693  T
Q  168 ttcctttgctctct-tttgttcttcca 193  Q
    |   |||||||| | ||||||||||||    
T  30115692 tgtatttgctctttatttgttcttcca 30115666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 193
Target Start/End: Original strand, 31118108 - 31118220
Alignment:
Q  79 acttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctc 178  Q
    |||||||| ||||||||| | ||  |||||| |||||| ||||||| ||| | |  | |||||| |||| |||||||||||| |||||||||||||||||    
T  31118108 acttgcttatgatgacgtcaccacttcaggagcacttt-gtcttcatgagtagttttcttcagacgctttaagcttcctttt-tgttgattcctttgctc 31118205  T
Q  179 tcttttgttcttcca 193  Q
    | | |||||||||||    
T  31118206 tttattgttcttcca 31118220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 1915715 - 1915772
Alignment:
Q  137 ttcagatgcttcaagcttcctttt-ttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||||||||| || || || || |||||||||||||||||||||||||||||||||    
T  1915715 ttcagatgcttctagatttctcttcttgttgattcctttgctctcttttgttcttcca 1915772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 13545487 - 13545454
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaacta 34  Q
    ||||||||||||||||||||||||||||||||||    
T  13545487 tgaagctttaagtcttgcatctcctgatgaacta 13545454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 193
Target Start/End: Original strand, 28139809 - 28139933
Alignment:
Q  69 cttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgat 168  Q
    ||||||||||||||| |||||||||||| ||||  |||||| ||  ||| |||||||||| | |  | ||||||||||| |||||||| || ||||||||    
T  28139809 cttctgatgaacttggttctgatgacgtcatcacttcaggagca-gtttatcttcaggagcagttttcttcagatgctttaagcttcccttgttgttgat 28139907  T
Q  169 tcctttgctctct-tttgttcttcca 193  Q
       |||||||| | ||||||||||||    
T  28139908 gtatttgctctttatttgttcttcca 28139933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 40032591 - 40032534
Alignment:
Q  137 ttcagatgcttcaagcttcctttt-ttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||||||||| || || || || |||||||||||||||||||||||||||||||||    
T  40032591 ttcagatgcttctaggtttctcttcttgttgattcctttgctctcttttgttcttcca 40032534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 40228974 - 40229031
Alignment:
Q  137 ttcagatgcttcaagcttcctttt-ttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||||||||| || || || || |||||||||||||||||||||||||||||||||    
T  40228974 ttcagatgcttctaggtttctcttcttgttgattcctttgctctcttttgttcttcca 40229031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 171
Target Start/End: Complemental strand, 9398659 - 9398559
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    |||||||||||||||| |  ||||||||| ||||  |||||| |||||  | |||||| || ||| || |||| |||||||||||||||| |||||||||    
T  9398659 gcttctgatgaacttgatgttgatgacgtcatcacttcaggagcactt--gacttcagcagcacttctcttcaaatgcttcaagcttcct-ttttgttga 9398563  T
Q  168 ttcc 171  Q
    ||||    
T  9398562 ttcc 9398559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 28464265 - 28464206
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    ||||||||| ||||||||||||||||||| ||||  |||||| ||| ||||||||||||||    
T  28464265 gcttctgataaacttgcttctgatgacgtcatcacttcaggagcac-tttgtcttcaggag 28464206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 30115843 - 30115782
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||  |||||||||||||||||| || |||||||||||   |||||||||||||    
T  30115843 tgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctgatga 30115782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 101
Target Start/End: Original strand, 33933523 - 33933555
Alignment:
Q  69 cttctgatgaacttgcttctgatgacgttatca 101  Q
    |||||||||||||||||||||||||||||||||    
T  33933523 cttctgatgaacttgcttctgatgacgttatca 33933555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 33933619 - 33933663
Alignment:
Q  149 aagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||||  |||||||||||||||||||||||| |||||||||||    
T  33933619 aagcttctctttttgttgattcctttgctctctattgttcttcca 33933663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 3245408 - 3245348
Alignment:
Q  2 gaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||||  |||||||||||||||||| || |||||||||||   |||||||||||||    
T  3245408 gaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctgatga 3245348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 11994070 - 11994117
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat 62  Q
    |||||||||||||||||||||| |||||||||||   |||||||||||    
T  11994070 ttgcatctcctgatgaactacagcttctggtgattcacagcttctgat 11994117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 101
Target Start/End: Complemental strand, 6512348 - 6512314
Alignment:
Q  67 tgcttctgatgaacttgcttctgatgacgttatca 101  Q
    |||||||||||||||||||||||||||||| ||||    
T  6512348 tgcttctgatgaacttgcttctgatgacgtcatca 6512314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 33933441 - 33933532
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgatga 93  Q
    |||||||||||||  ||||||  |||||||||| |||||| |||||||  ||||||||||||  |  |||||||||||||||  ||||||||||    
T  33933441 tgaagctttaagt--tgcatcctctgatgaactgcaacttatggtgattctcagcttctgataaacttgcttctgatgaactgtcttctgatga 33933532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 6499409 - 6499471
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgag 65  Q
    |||||||||||||||  ||||| |  ||||||| || ||||||||||||||| ||||||||||||    
T  6499409 tgaagctttaagtct--catcttcatatgaacttcagcttctggtgatcttctgcttctgatgag 6499471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 9089141 - 9089190
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||||||||||| || |||||||||||   |||||||||||||    
T  9089141 ttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatga 9089190  T

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Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 193
Target Start/End: Original strand, 13405429 - 13405458
Alignment:
Q  164 ttgattcctttgctctcttttgttcttcca 193  Q
    ||||||||||||||||||||||||||||||    
T  13405429 ttgattcctttgctctcttttgttcttcca 13405458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 128
Target Start/End: Complemental strand, 23391531 - 23391471
Alignment:
Q  67 tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    ||||| |||||||||||||||||||||||| ||||  |||| | ||| ||||||||||||||    
T  23391531 tgcttatgatgaacttgcttctgatgacgtcatcacttcagaagcac-tttgtcttcaggag 23391471  T

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Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 42244009 - 42244058
Alignment:
Q  144 gcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||| |||||||| |||||||||||| ||||||||| | |||||||||||    
T  42244009 gctttaagcttccctttttgttgatttctttgctctttattgttcttcca 42244058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 23478536 - 23478624
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatg-agatgcttctgatgaac-ttgcttctgatgacgttatca 101  Q
    |||||||| ||||||||||  | ||||||||||| | |||||||||||| |  |||||||| ||||| ||||||||||| |||| ||||    
T  23478536 ttgcatcttctgatgaactgtagcttctggtgatatacagcttctgatgaacttgcttctgttgaactttgcttctgataacgtcatca 23478624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 25111839 - 25111763
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagat-gcttctgatgaacttgcttctga 90  Q
    |||||||| |||||||||| ||  |||||||||| | ||||||||||||| || |||||||||  ||||||| ||||    
T  25111839 ttgcatcttctgatgaactccagtttctggtgatatacagcttctgatgaaatagcttctgatagacttgctactga 25111763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 25170930 - 25170854
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagat-gcttctgatgaacttgcttctga 90  Q
    |||||||| |||||||||| ||  |||||||||| | ||||||||||||| || |||||||||  ||||||| ||||    
T  25170930 ttgcatcttctgatgaactccagtttctggtgatatacagcttctgatgaaatagcttctgatagacttgctactga 25170854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 120; Significance: 2e-61; HSPs: 93)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 10883161 - 10882956
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||  ||    
T  10883161 tgaaactttaagtcttgcatctcctgatgaactacagcttctggtgatcttcagcttctgatgggatgcttctgatgaacttgcttctgacgacgtcgtc 10883062  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| ||| |||| |||||| || ||| || |||||| |||| |||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  10883061 acttcaggagcac-tttgacttcagtagcacttctcttcagacgctttaagctt-catttttgttgattcctttgctctcttttgttcttccagaaccta 10882964  T
Q  201 atgatgat 208  Q
    || |||||    
T  10882963 ataatgat 10882956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 11319575 - 11319780
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||    
T  11319575 tgaagcttgaagtcttgcatctcttgatgacctacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttttaatgacgtcatc 11319674  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| ||| |||| ||||||||| ||| || |||||| |||| |||||||| |||||||||||| | ||||||||||||||||||||||||||||    
T  11319675 acttcaggagcac-tttggcttcaggagcacttctcttcagacgctttaagcttcc-tttttgttgatttcattgctctcttttgttcttccagaaccta 11319772  T
Q  201 atgatgat 208  Q
    || |||||    
T  11319773 ataatgat 11319780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 13880274 - 13880471
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||| ||||||||  ||||||||||||| | |||||  ||||||||||||||||||||||||||||||||||||||||||||||||| || |||    
T  13880274 tgaagctttatgtcttgcaattcctgatgaactagagcttctcatgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgatgtcatc 13880373  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| ||| |||| |||||| || ||| || |||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13880374 acttcaggagcac-tttgacttcagaagcacttctcttcagacgctttaagcttcc-tttttgttgattcctttgctctcttttgttcttccagaaccta 13880471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 13692512 - 13692710
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||| ||||| ||||||| ||  | ||||||||||||||  |||||||| ||||||||||||||||||||||||||||||| || |||    
T  13692512 tgaagctttaagtcttacatcttctgatgagctttagcttctggtgatctt--gcttctgaagagatgcttctgatgaacttgcttctgatgatgtcatc 13692609  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| |||||||||||||||||| ||| || |||||| || | |||||||| |||||  ||||||||||||||||||||||||||||||||||||    
T  13692610 acttcaggagcacttttgtcttcaggagcacttctcttcagacgccttaagcttcc-tttttcctgattcctttgctctcttttgttcttccagaaccta 13692708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 14193244 - 14193445
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||| |||||||||| | ||| ||||||||||| ||||||||| |||||||| |||||||||||||||||||||||| |||    
T  14193244 tgaagctttaagtcttgcatctcttgatgaactagagcttatggtgatcttctgcttctgataagatgcttatgatgaacttgcttctgatgacgtcatc 14193343  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattc----ctttgctctcttttgttcttccagaa 196  Q
    |  |||||| ||||||||||||||||||  || || |||||| ||||||||||| | |||||||||||||     || ||||||||||||||||||||||    
T  14193344 acttcaggagcacttttgtcttcaggagcgcttctcttcagacgcttcaagctt-catttttgttgattctttaattagctctcttttgttcttccagaa 14193442  T
Q  197 cct 199  Q
    |||    
T  14193443 cct 14193445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 11793079 - 11793276
Alignment:
Q  3 aagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgc-ttctgatgacgttatca 101  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||| || |||||||||||| || | ||||||| ||||    
T  11793079 aagctttaagtcttgcatctcctgatgaacttcagcttctggtgatctttagcttctgatgagatgtttatgatgaacttgctttttaatgacgtcatca 11793178  T
Q  102 gctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaa 201  Q
      | |||| |||  |   ||||||||| ||| || |||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||    
T  11793179 ctttaggagcac--taaacttcaggagcacttcttttcagatgcttcaagcttcc-tttttgttgattccttcgctctcttttgttcttcctgaacctaa 11793275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 12366736 - 12366539
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||| ||||| ||||||||||||| || |||||||||| |||  |||||||||||||||||| ||||||||||| ||||||||| || |||    
T  12366736 tgaagctttaagttttgcacctcctgatgaacttcagcttctggtgacctt--gcttctgatgagatgcttttgatgaacttgattctgatgatgtcatc 12366639  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| ||||||    |||||||| ||| || || |||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||    
T  12366638 acttcaggagcactttaaa-ttcaggagcacttctctttagatgcttcaagcttccttttt-gttgattccattgctctctttttttcttccagaaccta 12366541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 4 - 208
Target Start/End: Complemental strand, 13260608 - 13260407
Alignment:
Q  4 agctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagc 103  Q
    ||||||||||||||||||||||||||||||  | ||||||||||||||  |||||| ||||||||||| |||||||||||||||||||||| | ||||      
T  13260608 agctttaagtcttgcatctcctgatgaactttagcttctggtgatctt--gcttctaatgagatgcttatgatgaacttgcttctgatgacatcatcact 13260511  T
Q  104 tcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaatg 203  Q
    |||||| |||||||| ||||| ||| ||| || || | ||||||||||||||| ||| |||| |||||||  |||||||||||||||| | ||||||||     
T  13260510 tcaggagcacttttgacttcatgagcacttctctttaaatgcttcaagcttcc-tttatgttaattccttatctctcttttgttcttcaataacctaata 13260412  T
Q  204 atgat 208  Q
    |||||    
T  13260411 atgat 13260407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 22578009 - 22577811
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||  || |||||||||||||||||||||| ||||||||| ||||||| |||    
T  22578009 tgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatctt--gcctctgatgagatgcttctgatgaccttgcttctaatgacgtcatc 22577912  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatg--cttcaagcttccttttttgttgattcctttgctct-cttttgttcttccagaac 197  Q
    |  |||||| |||||||  ||||||||| ||| || ||| |  |  |||||||||||| ||||||||||||| |||||||| ||||||||||||||||||    
T  22577911 acttcaggagcactttt-acttcaggagcacttctcttctggagcacttcaagcttcc-tttttgttgattcatttgctctccttttgttcttccagaac 22577814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 2913596 - 2913412
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||| ||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||              |||||||| ||||||||| ||     
T  2913596 tgaagatttaagtcttgcatctcctgatgaactacagtttctggtgatcttcatcttctgatga--------------acttgcttttgatgacgtcatt 2913511  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| |||||||||||||||||| ||| || |||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2913510 acttcaggagcacttttgtcttcaggagcacttctcttcatatgctttaagcttcct-ttttgttgattcctttgctctcttttgttcttccagaaccta 2913412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 30026075 - 30026258
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||              |||||||||||||||||| |||    
T  30026075 tgaagctttaagtcttgcatctcttgatgaactagagcttctggtgatcttcagcttctgatga--------------acttgcttctgatgacgtcatc 30026160  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| |||||||  |||||| || ||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  30026161 acttcaggagcactttta-cttcagaagcacttctcttcagatgcttcaagcttcctttt-tgttgattcctttgctctcttttgttcttccataaccta 30026258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 68 - 200
Target Start/End: Original strand, 2500261 - 2500392
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    ||||||||||||||||||| ||||||||| ||||  ||| || |||||||||||||||||| ||| || |||||||||||||||||||| ||||||||||    
T  2500261 gcttctgatgaacttgcttatgatgacgtcatcacttcatgagcacttttgtcttcaggagcacttctcttcagatgcttcaagcttcc-tttttgttga 2500359  T
Q  168 ttcctttgctctcttttgttcttccagaaccta 200  Q
    |||||| ||||||||||||||||||| ||||||    
T  2500360 ttccttagctctcttttgttcttccataaccta 2500392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 16316545 - 16316365
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| | |||    
T  16316545 tgaagctttaagtcttgcatcccctgatgaacttcaacttctggtgatctt--gcttctgatgagatgcttctgatgaacttgcttctgatgacatcatc 16316448  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |                  ||||||||| ||| || || ||| ||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||    
T  16316447 a------------------cttcaggagcacttctctttagacgcttcaagcttcc-tttttgttgattccttagctctcttttgttctttcagaaccta 16316367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 15468086 - 15468186
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||||||||||||||||||||| | |||||||| ||||||||| ||||||||||||| | |||||||||||||||||||||||| |||    
T  15468086 tgaagctttaagtcttgcatctcctgatgaactagagcttctggtaatcttcagcatctgatgagatgcatatgatgaacttgcttctgatgacgtcatc 15468185  T
Q  101 a 101  Q
    |    
T  15468186 a 15468186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 44467235 - 44467428
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||              |||||||||||||| ||| |||    
T  44467235 tgaagctttaagtcttgcatctcctgatgaacttcagcttttggtgatcttcagcttctgatga--------------acttgcttctgatggcgtcatc 44467320  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| |||| |   ||||||||| ||| || |||||||||||||| ||||||||| |||||||||| ||||||| ||||||||||||||||||||    
T  44467321 acttcaggagcactata--cttcaggagcacttctcttcagatgcttcaaacttcctttt-tgttgattccattgctctattttgttcttccagaaccta 44467417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 28409209 - 28409401
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||| ||| |||||||||||| |||||||||  | |||||||||| ||   ||||||||||||||||||||||||||||||||||||||||||| |||    
T  28409209 tgaagccttatgtcttgcatctcttgatgaactttagcttctggtga-ctgttgcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatc 28409307  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| |||||     ||||  || ||| || |||||| ||||||| ||||| ||||||| ||||| ||||||||||||||||||| |||||||||    
T  28409308 acttcaggagcactt-----ttcaatagcacttctcttcagacgcttcaaacttcc-tttttgtcgattcatttgctctcttttgttcttacagaaccta 28409401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 68 - 202
Target Start/End: Original strand, 13648935 - 13649068
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    ||||||| ||| ||||||||||||||||| ||||  |||||| |||||||||||||||||| ||| || |||||| || | || ||||| ||||||||||    
T  13648935 gcttctgttgatcttgcttctgatgacgtcatcacttcaggagcacttttgtcttcaggagcacttctcttcagacgccttaaacttcc-tttttgttga 13649033  T
Q  168 ttcctttgctctcttttgttcttccagaacctaat 202  Q
    |||||||||||||||||||||||| ||||||||||    
T  13649034 ttcctttgctctcttttgttcttctagaacctaat 13649068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 21283361 - 21283270
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgac 94  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||  |||||||||||||| ||||||||||||||| ||||||||||    
T  21283361 tgaagctttaagtcttgcatatcctgatgaacttcaacttctggtgatctt--gcttctgatgagattcttctgatgaacttgattctgatgac 21283270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 15088777 - 15088856
Alignment:
Q  120 cttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    ||||||||| ||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15088777 cttcaggagcacttctcttcagatgcttcaagcttcctttt-tgttgattcctttgctctcttttgttcttccagaaccta 15088856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 48800516 - 48800430
Alignment:
Q  115 tttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaat 202  Q
    |||| ||||||||| ||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  48800516 tttgacttcaggagcacttctcttcagatgcttcaagcttccttttt-gttgattccattgctctcttttgttcttccagaacctaat 48800430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 13137799 - 13137713
Alignment:
Q  115 tttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaat 202  Q
    |||| ||||||||| ||| || ||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||    
T  13137799 tttgacttcaggagcacttctcttcagatgcttcaagcttccttttt-gttgattccttacctctcttttgttcttccagaacctaat 13137713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 33691700 - 33691518
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||| ||||||||||||||||||||||| | ||||||||||| |||| ||||| ||||              ||||||||||||| |||| | |    
T  33691700 tgaagctttatgtcttgcatctcctgatgaactagagcttctggtgattttcaacttctaatga--------------acttgcttctgataacgtcacc 33691615  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    |  |||||| |||||| ||||||||||| | | || |||||| |||| || |||||||||| ||||||||||||||||||| |||||||||||||||||    
T  33691614 acttcaggagcacttt-gtcttcaggagcagttctcttcagacgctttaaacttccttttt-gttgattcctttgctctctattgttcttccagaacct 33691518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 67 - 199
Target Start/End: Original strand, 13880827 - 13880956
Alignment:
Q  67 tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttg 166  Q
    |||||||||||||||||||||||||||||| ||||  |||||| |||||  | |||||  |  |||  | |||||||||||||||||||||| || ||||    
T  13880827 tgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactt--gacttcataaccacttttcttcagatgcttcaagcttccttctt-gttg 13880923  T
Q  167 attcctttgctctcttttgttcttccagaacct 199  Q
    ||||| |||||||| ||||||||||||||||||    
T  13880924 attccattgctctcatttgttcttccagaacct 13880956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 9069732 - 9069828
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatg-agatgcttctgatgaacttgcttctgatgacgt 96  Q
    ||||||||||||| ||||||||||||||||| || | ||||||||||| |||||||||||||| |  || ||||||| |||||||||||||||||||    
T  9069732 tgaagctttaagttttgcatctcctgatgaaatagagcttctggtgattttcagcttctgatgaacttgtttctgataaacttgcttctgatgacgt 9069828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 193
Target Start/End: Original strand, 14426752 - 14426874
Alignment:
Q  69 cttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgat 168  Q
    |||||||||||||||||||||||||||| | ||  |||||| ||| |||||||||||||| | |  | |||||| |||| |||||||| |||||||||||    
T  14426752 cttctgatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtcttcaggagcagttttcttcagacgctttaagcttcc-tttttgttgat 14426849  T
Q  169 tcctttgctctcttttgttcttcca 193  Q
    ||||||||||| | |||||||||||    
T  14426850 tcctttgctctttattgttcttcca 14426874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23279947 - 23279887
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctga 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  23279947 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgattttcaccttctga 23279887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 38 - 208
Target Start/End: Original strand, 13303045 - 13303196
Alignment:
Q  38 cttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctat 137  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||                  ||||||||| ||| || |    
T  13303045 cttctgatgatcttcagcttctgatgagatgcttctgatgaagttgcttctaatgacgtcatca------------------cttcaggagcacttctct 13303126  T
Q  138 tcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaatgatgat 208  Q
    ||||| |||| || ||| |||||||||||||| ||||||||||||||||||||||| |||||||| |||||    
T  13303127 tcagacgctttaaactt-cttttttgttgatttctttgctctcttttgttcttccataacctaataatgat 13303196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 21695571 - 21695634
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||    
T  21695571 tgaagctttaagtcttgcatctcttgatgaacttcagcttctggtgatcttcagcttctgatga 21695634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 29935341 - 29935272
Alignment:
Q  7 tttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatga 78  Q
    |||||||||||||||||||||||||||  | ||||||||||||||  |||||||||||||||||||||||||    
T  29935341 tttaagtcttgcatctcctgatgaactttagcttctggtgatctt--gcttctgatgagatgcttctgatga 29935272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 200
Target Start/End: Original strand, 4494725 - 4494840
Alignment:
Q  82 tgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctct 181  Q
    ||||||||||||||| ||||  |||||| |||| |   ||||||||| ||| || || ||||||||||||||||||||| |||||||| | |||||||||    
T  4494725 tgcttctgatgacgtcatcacttcaggagcactata--cttcaggagcacttctctttagatgcttcaagcttcctttt-tgttgatttcattgctctct 4494821  T
Q  182 tttgttcttccagaaccta 200  Q
    || ||||||||||||||||    
T  4494822 ttcgttcttccagaaccta 4494840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 13730543 - 13730493
Alignment:
Q  158 tttttgttgattcctttgctctcttttgttcttccagaacctaatgatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13730543 tttttgttgattcctttgctctcttttgttcttccagaacctaataatgat 13730493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 48062817 - 48062654
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatg-agatgcttctgatgaacttgcttctgatgacgttat 99  Q
    |||||||||||||  |||||||| ||||||||| || |||||||||||   |||||||||||| |  |||||||||||||||||||||||||| ||| ||    
T  48062817 tgaagctttaagt--tgcatctcttgatgaactgcagcttctggtgatacacagcttctgatggacttgcttctgatgaacttgcttctgatggcgtcat 48062720  T
Q  100 cagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgtt 165  Q
    ||  |||||| |||||    ||||||||| | |  | |||||| |||| |||||||| ||||||||    
T  48062719 cacttcaggagcacttcacacttcaggagcaattttcttcagacgctttaagcttccctttttgtt 48062654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 4821643 - 4821768
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatg-agatgcttctgatgaacttgcttctgatgacgttat 99  Q
    |||||||||||||  || |||||| |||||||| || ||||||||||| |||||||||||| | |  |||||||||||| ||||||| ||||||||| ||    
T  4821643 tgaagctttaagt--tgtatctccggatgaactgcagcttctggtgattttcagcttctgacgaacttgcttctgatgaccttgcttttgatgacgtcat 4821740  T
Q  100 cagctcaggatcacttttgtcttcaggag 128  Q
    ||  |||||| ||| ||||||||||||||    
T  4821741 cacttcaggagcac-tttgtcttcaggag 4821768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13302980 - 13303033
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcag 54  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  13302980 tgaagctttaagtcttgcatctcctaatgaactacagcttctggtgatcttcag 13303033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 201
Target Start/End: Complemental strand, 9098179 - 9098035
Alignment:
Q  54 gcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagct 153  Q
    |||| ||||||| ||||||| |||||||||||||||||||| | ||||  |||||| |||||  | |||||| |   ||  | |||||||||||||||||    
T  9098179 gcttttgatgaggtgcttctaatgaacttgcttctgatgacatcatcacttcaggagcactt--gacttcagaacctcttttcttcagatgcttcaagct 9098082  T
Q  154 tccttttttgttgattcctttgctctcttttgttcttccagaacctaa 201  Q
    ||| | || ||||||||| |||||||| ||||||||||||||| ||||    
T  9098081 tccatctt-gttgattccattgctctcatttgttcttccagaatctaa 9098035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 13137883 - 13137827
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagctt 57  Q
    ||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  13137883 tgaagctttaagtcttgcatctccttatgaactagagcttctggtgatcttcagctt 13137827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 15088690 - 15088753
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||| |||||||||||||||||||| || | |||||||||||||||||||| ||||||    
T  15088690 tgaagctttacgtcttgcatctcctgatgaattagagcttctggtgatcttcagcttatgatga 15088753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 29935219 - 29935161
Alignment:
Q  149 aagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaatgatgat 208  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||    
T  29935219 aagcttccttttt-gttgattccttagctctcttttgttcttccagaacctaataatgat 29935161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 191
Target Start/End: Complemental strand, 30945310 - 30945189
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    ||||||||||||||||||||||||||||| | ||  |||||| ||| |||||||||||||| | |  | |||||| | || |||||||| ||||||||||    
T  30945310 gcttctgatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtcttcaggagcagttttcttcagacgttttaagcttcc-tttttgttga 30945213  T
Q  168 ttcctttgctctcttttgttcttc 191  Q
     || |||||||| |||||||||||    
T  30945212 ctcatttgctcttttttgttcttc 30945189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 2265505 - 2265446
Alignment:
Q  3 aagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||  |||||||||||||||||||||||||||||||||  ||||||||||||||    
T  2265505 aagctttaagt--tgcatctcctgatgaactacaacttctggtgattctcagcttctgatga 2265446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 8183111 - 8183213
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagat-gcttctgatgaacttgcttctgatgacgttatcagctcaggatcac 113  Q
    ||||||||||||||||||| || |||||||||||   |||||| ||||||  | |||||| |||||||||||||||||||||| ||||  |||||| |||    
T  8183111 ttgcatctcctgatgaactgcagcttctggtgattcacagcttttgatgaacttgcttctaatgaacttgcttctgatgacgtcatcacttcaggagcac 8183210  T
Q  114 ttt 116  Q
    |||    
T  8183211 ttt 8183213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 42 - 202
Target Start/End: Complemental strand, 13032032 - 13031876
Alignment:
Q  42 tggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcag 141  Q
    ||||||||||| |||||||||||| || ||||  ||||||||||||||||||||| || |   ||||| |||  |   ||||||||| |||  | |||||    
T  13032032 tggtgatcttctgcttctgatgaggtgtttctagtgaacttgcttctgatgacgtcattaatccaggagcac--taaacttcaggagcacttttcttcag 13031935  T
Q  142 atgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaat 202  Q
    | ||||||||||| | |  ||||||||||| |||||||| |||||||||||||||||||||    
T  13031934 acgcttcaagctt-catccttgttgattccattgctctc-tttgttcttccagaacctaat 13031876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 19710987 - 19710899
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagat-gcttctgatgaacttgcttctgatgacgttatcag 102  Q
    |||||||| |||||||||||||  |||||||||| | ||| ||||||||| || |||||||||  |||||||||||||||||| |||||    
T  19710987 ttgcatcttctgatgaactacagtttctggtgatatacagtttctgatgaaatagcttctgatagacttgcttctgatgacgtcatcag 19710899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 21695684 - 21695739
Alignment:
Q  146 ttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaat 202  Q
    ||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||    
T  21695684 ttcaagcttcctttt-tgttgattccttaactctcttttgttcttccagaacctaat 21695739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 24788311 - 24788372
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||||||||||||||||| ||||||| || ||||||||||||||  |||||||||||    
T  24788311 tgaagctttaagtcttgcatctcctaatgaacttcagcttctggtgatctt--gcttctgatga 24788372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 48236890 - 48236829
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||  |||||||||||||||||| || ||||||||||| |||||||||||||||    
T  48236890 tgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattttcagcttctgatga 48236829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 331815 - 331877
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||||||  ||||||||||||| ||| || |||||||||||||||||||||||||||    
T  331815 tgaagctttaagtcc-gcatctcctgatggacttcagcttctggtgatcttcagcttctgatga 331877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 331956 - 332015
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacc 198  Q
    ||||||||||| ||||||||||||  |||| |||||| ||||||||||||||||||||||||    
T  331956 ttcagatgctttaagcttcctttt--gttgtttccttagctctcttttgttcttccagaacc 332015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 55 - 208
Target Start/End: Complemental strand, 5000789 - 5000637
Alignment:
Q  55 cttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagctt 154  Q
    |||||| ||||||||||||||  | ||||||||||||||| |  |||  |||||| ||| |||| ||||||||  ||| || |||||||| ||||| |||    
T  5000789 cttctggtgagatgcttctgacaatcttgcttctgatgacatcgtcacttcaggagcac-tttgacttcaggatcacttctcttcagatgtttcaaactt 5000691  T
Q  155 ccttttttgttgattcctttgctc-tcttttgttcttccagaacctaatgatgat 208  Q
    || |||||||||||||||| |||| |  |||| |||| ||||||||||| |||||    
T  5000690 cc-tttttgttgattccttagctcttaatttgctctttcagaacctaataatgat 5000637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 193
Target Start/End: Complemental strand, 9709739 - 9709631
Alignment:
Q  83 gcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctctt 182  Q
    |||||||||||||| | ||  |||||| |||||| ||||||||||| | |  | |||||| |||| ||||||||||||| |||||||| ||||||||||     
T  9709739 gcttctgatgacgtcaccacttcaggagcacttt-gtcttcaggagcagttttcttcagacgctttaagcttccttttt-gttgattcatttgctctcta 9709642  T
Q  183 ttgttcttcca 193  Q
    |||||||||||    
T  9709641 ttgttcttcca 9709631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 120 - 190
Target Start/End: Original strand, 24788381 - 24788450
Alignment:
Q  120 cttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttctt 190  Q
    ||||||||| ||| || ||||||||||||||||||||  |||||||||||| |||||||||||||| ||||    
T  24788381 cttcaggagcacttctcttcagatgcttcaagcttcc-attttgttgattcatttgctctcttttggtctt 24788450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 35952663 - 35952561
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcac 113  Q
    |||||||  |||||||||| |||||||||||||| || ||||||||||  |  ||||||||||||| |||||||||||| ||| ||||  |||||| |||    
T  35952663 ttgcatcctctgatgaactgcaacttctggtgatttttagcttctgataaacttgcttctgatgaatttgcttctgatgtcgtcatcacttcaggaacac 35952564  T
Q  114 ttt 116  Q
    |||    
T  35952563 ttt 35952561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 9709778 - 9709729
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||||||||||| || ||||||||||| |||||||||||||||    
T  9709778 ttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatga 9709729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 13890799 - 13890735
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaat 202  Q
    |||||||||||||||||||||| || ||||||||| ||||| || |||||||| ||||||||||||    
T  13890799 ttcagatgcttcaagcttccttctt-gttgattccattgctttcatttgttctcccagaacctaat 13890735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 33605868 - 33605917
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||||||||||| || ||||||||||| |||||||||||||||    
T  33605868 ttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatga 33605917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 19710853 - 19710797
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    ||||||||||| | |||||  ||||||||||||| ||||||||||||||||||||||    
T  19710853 ttcagatgctttaggcttctctttttgttgattcatttgctctcttttgttcttcca 19710797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 4429059 - 4428984
Alignment:
Q  19 atctcctgatgaactacaacttctggtgatcttcagcttctgatgagat-gcttctgatgaacttgcttctgatga 93  Q
    |||||| |||||||| || |||||||||||   |||||||||||||  | ||||||||||||||||||||||||||    
T  4429059 atctccagatgaactgcagcttctggtgataaacagcttctgatgaatttgcttctgatgaacttgcttctgatga 4428984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 193
Target Start/End: Complemental strand, 16542955 - 16542835
Alignment:
Q  70 ttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgatt 169  Q
    ||||||||||||| ||||||||||||| | ||  ||| || |||||| |||||||| || | |  | |||||| |||| ||||||||||||| |||||||    
T  16542955 ttctgatgaactttcttctgatgacgtcaccacttcaagagcacttt-gtcttcagaagcagttttcttcagacgctt-aagcttccttttt-gttgatt 16542859  T
Q  170 cctttgctctcttttgttcttcca 193  Q
    |||||||||| | |||||||||||    
T  16542858 cctttgctctttattgttcttcca 16542835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 193
Target Start/End: Original strand, 16622707 - 16622827
Alignment:
Q  70 ttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgatt 169  Q
    ||||||||||||| ||||||||||||| | ||  ||| || |||||| |||||||| || | |  | |||||| |||| |||||||||||| ||||||||    
T  16622707 ttctgatgaactttcttctgatgacgtcaccacttcaagagcacttt-gtcttcagaagcagttttcttcagacgctt-aagcttcctttt-tgttgatt 16622803  T
Q  170 cctttgctctcttttgttcttcca 193  Q
    |||||||||| | |||||||||||    
T  16622804 cctttgctctttattgttcttcca 16622827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 4494676 - 4494718
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctg 43  Q
    ||||||||||||||||||||||||||||||||| || ||||||    
T  4494676 tgaagctttaagtcttgcatctcctgatgaacttcagcttctg 4494718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 12174316 - 12174203
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagat-gcttctgatgaacttgcttctgatgacgttatcagctcaggatcac 113  Q
    |||||||  |||||||||| || ||||||||||| || |||||||||| |  | |||||||||||||| |||| ||||||||| ||||  |||||| |||    
T  12174316 ttgcatcctctgatgaactgcagcttctggtgatttttagcttctgataaacttgcttctgatgaactcgcttttgatgacgtcatcacttcaggagcac 12174217  T
Q  114 ttttgtcttcaggag 128  Q
     | ||||||||||||    
T  12174216 -tatgtcttcaggag 12174203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 115
Target Start/End: Complemental strand, 13730640 - 13730566
Alignment:
Q  41 ctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcactt 115  Q
    ||||||| ||| ||||| ||||||||||||||| ||||||||| || ||||||||| ||||  |||||| |||||    
T  13730640 ctggtgagctttagcttatgatgagatgcttctaatgaacttgtttatgatgacgtcatcacttcaggagcactt 13730566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 8998733 - 8998676
Alignment:
Q  137 ttcagatgcttcaagcttcctttt-ttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||||||||| || || || || |||||||||||||||||||||||||||||||||    
T  8998733 ttcagatgcttctaggtttctcttcttgttgattcctttgctctcttttgttcttcca 8998676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 199
Target Start/End: Complemental strand, 23279873 - 23279832
Alignment:
Q  158 tttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  23279873 tttttgttgattcttttgctctctattgttcttccagaacct 23279832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 1293185 - 1293244
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    |||||||||||||||||||||||| |||| ||||  |||||| ||| ||||||||||||||    
T  1293185 gcttctgatgaacttgcttctgataacgtcatcacttcaggagcac-tttgtcttcaggag 1293244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 7339821 - 7339762
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    ||||||||||||||||||||||||||||| | ||  |||||| ||| ||||||||||||||    
T  7339821 gcttctgatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtcttcaggag 7339762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 11086834 - 11086802
Alignment:
Q  161 ttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||||||||||||||||||||||||||||||    
T  11086834 ttgttgattcctttgctctcttttgttcttcca 11086802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 13018469 - 13018421
Alignment:
Q  27 atgaactacaacttctggtgatcttcagcttctgatgagatgcttctga 75  Q
    ||||||| || ||||||||||||||| |||||||||||| |||||||||    
T  13018469 atgaacttcagcttctggtgatcttctgcttctgatgaggtgcttctga 13018421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 200
Target Start/End: Complemental strand, 19236947 - 19236803
Alignment:
Q  54 gcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagct 153  Q
    |||||||||||| || |||||| |||||||||||||||||||| ||||  |||| | |||  ||| |||||  |  |||  | ||||||||||||| |||    
T  19236947 gcttctgatgaggtggttctgacgaacttgcttctgatgacgtcatcacttcagaagcac--ttgacttcaaaatcactattcttcagatgcttcaggct 19236850  T
Q  154 tccttttttgttgattcctttgctc-tcttttgttcttccagaaccta 200  Q
    ||| |||||||||||||| |  ||| |  |||||||||||||||||||    
T  19236849 tcc-tttttgttgattccataactcttaatttgttcttccagaaccta 19236803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 27871931 - 27872031
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    ||||||||||||||||||||||||||||| || |  |||||| |||||    ||||||||| | |  | |||||| |||| |||||||| ||||||||||    
T  27871931 gcttctgatgaacttgcttctgatgacgtcattacttcaggagcacttcacacttcaggagcagttttcttcagacgctttaagcttccctttttgttga 27872030  T
Q  168 t 168  Q
    |    
T  27872031 t 27872031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 28622344 - 28622283
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||  |||||||||||||||||| || ||||||||||| || ||||| ||||||    
T  28622344 tgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgatttttagcttatgatga 28622283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 35952524 - 35952469
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||| |||| ||||||||||||| ||||||||||||||||| | |||||||||||    
T  35952524 ttcagacgctttaagcttccttttt-gttgattcctttgctctttattgttcttcca 35952469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 39284533 - 39284467
Alignment:
Q  38 cttctggtgatcttcagcttctgatgagat---gcttctgatgaacttgcttctgatgacgttatca 101  Q
    |||||| |||||||||||||||| |||  |   ||||||||||||||||||||||||||||| ||||    
T  39284533 cttctgatgatcttcagcttctggtgatcttcagcttctgatgaacttgcttctgatgacgtcatca 39284467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 199
Target Start/End: Original strand, 15469794 - 15469833
Alignment:
Q  160 tttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  15469794 tttgttgattcctttgctctctattgttcttccataacct 15469833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 21692457 - 21692504
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgat 48  Q
    ||||||||||||||||||||||||| ||||||| || |||||| ||||    
T  21692457 tgaagctttaagtcttgcatctcctaatgaacttcagcttctgatgat 21692504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 191
Target Start/End: Complemental strand, 30944277 - 30944156
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    ||||||||||||| ||||||||||| | | | ||  |||||| |||||| ||||||||||| | |  | |||| | |||| ||||||||||||| |||||    
T  30944277 gcttctgatgaacgtgcttctgatggcttcaccacttcaggagcacttt-gtcttcaggagcagttttcttcaaacgctttaagcttccttttt-gttga 30944180  T
Q  168 ttcctttgctctcttttgttcttc 191  Q
    ||| |||||||| | |||||||||    
T  30944179 ttcatttgctctttattgttcttc 30944156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 39284553 - 39284490
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||| | |||  ||||| ||||||| || || |||||||||||||||||||||||||||    
T  39284553 tgaagctttgattctctcatcttctgatgatcttcagcttctggtgatcttcagcttctgatga 39284490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 4411943 - 4411870
Alignment:
Q  19 atctcctgatgaactacaacttctggtgatcttcagcttctgatg-agatgcttctgatgaacttgcttctgat 91  Q
    |||||| |||||||| || |||||||||||   |||||||||||| |  ||||||| |||||||||||||||||    
T  4411943 atctccagatgaactgcagcttctggtgataaacagcttctgatgaatttgcttctaatgaacttgcttctgat 4411870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 193
Target Start/End: Complemental strand, 12174159 - 12174122
Alignment:
Q  156 cttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||||||||||||||||||||| | |||||||||||    
T  12174159 cttttttgttgattcctttgctctttattgttcttcca 12174122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 16542996 - 16542947
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||||||||||| || ||| ||||||| ||||| |||||||||    
T  16542996 ttgcatctcctgatgaactgcagcttatggtgattttcagtttctgatga 16542947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 16622666 - 16622715
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||||||||||| || ||| ||||||| ||||| |||||||||    
T  16622666 ttgcatctcctgatgaactgcagcttatggtgattttcagtttctgatga 16622715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2500208 - 2500256
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatc 49  Q
    |||||||||||||||||||||||||||  ||| | | ||||||||||||    
T  2500208 tgaagctttaagtcttgcatctcctgaaaaacaagagcttctggtgatc 2500256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 5826185 - 5826244
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    ||||||||||||||||||||||||||| | || |  |||||| ||| ||||||||||||||    
T  5826185 gcttctgatgaacttgcttctgatgacttcattacttcaggagcac-tttgtcttcaggag 5826244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 13648899 - 13648960
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||||||| |||||||||||||| ||  | |||||| |||||||  |||||||||||    
T  13648899 tgaagctttaagtctcgcatctcctgatgagctttagcttctgttgatctt--gcttctgatga 13648960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 16111736 - 16111681
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||| |||| ||||||||||||| |||||||||||| |||| | |||||||||||    
T  16111736 ttcagacgctttaagcttccttttt-gttgattccttttctctttattgttcttcca 16111681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 19339196 - 19339137
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    ||||||||||||||||||||||| ||||| ||||  |||| | ||| ||||||||||||||    
T  19339196 gcttctgatgaacttgcttctgaggacgtcatcacttcagaagcac-tttgtcttcaggag 19339137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 21381374 - 21381275
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    |||||||||||||| |||||||||||||| ||||  |||| | ||| |||| ||| ||||| |||  | |||||| |||| |||||||| ||| ||||||    
T  21381374 gcttctgatgaactagcttctgatgacgtcatcacttcagaagcac-tttgactttaggagcacttttcttcagacgctttaagcttccctttgtgttga 21381276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 27871880 - 27871941
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||  ||||| |||||||||||| || |||||||||||   |||||||||||||    
T  27871880 tgaagctttaagt--tgcatttcctgatgaactgcagcttctggtgattcacagcttctgatga 27871941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 32264714 - 32264669
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgat 48  Q
    ||||||||||||||  ||||||||||||||||| || |||||||||||    
T  32264714 tgaagctttaagtc--gcatctcctgatgaactgcagcttctggtgat 32264669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 33605992 - 33606047
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||||| || |||||||||| || ||||||||||||||||| | |||||||||||    
T  33605992 ttcagatgttttaagcttccttatt-gttgattcctttgctctttattgttcttcca 33606047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 48236787 - 48236732
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||| |||| ||||||||||||| |||||||||||| |||| | |||||||||||    
T  48236787 ttcagacgctttaagcttccttttt-gttgattcctttactctttattgttcttcca 48236732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 96
Target Start/End: Complemental strand, 48236839 - 48236811
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgt 96  Q
    |||||||||||||||||||||||||||||    
T  48236839 gcttctgatgaacttgcttctgatgacgt 48236811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 48805861 - 48805785
Alignment:
Q  18 catctcctgatgaactacaacttctggtgatcttcagcttctgatgagatg-cttctgatgaacttgcttctgatga 93  Q
    |||||| ||||||||| || |||||||||||    ||||||||||||  |  |||||||||||||||||||||||||    
T  48805861 catctcttgatgaactgcagcttctggtgatacatagcttctgatgaactttcttctgatgaacttgcttctgatga 48805785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 2e-61; HSPs: 67)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 13435706 - 13435903
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||||||||||||| || ||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||    
T  13435706 tgaagctttaagtcttgcatctcctgatgaacttcagcttatggtgatcttctgcttctgatgagatgcttttgatgaacttgcttctgatgacgtcatc 13435805  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| |||||||  ||| ||||| ||| || |||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||    
T  13435806 acttcaggagcactttt-actttaggagcacttctcttcagatgcttcaagcttcc-tttttgttgattccattgctctcttttgttctttcagaaccta 13435903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 3 - 197
Target Start/End: Complemental strand, 15531597 - 15531404
Alignment:
Q  3 aagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcag 102  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||| | || ||||     
T  15531597 aagctttaagtcttgcatcttctgatgaactacaacttctggtgatcttatgattctgatgagatgcttctgatgaacttgcttctgattatgtcatcac 15531498  T
Q  103 ctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaac 197  Q
     |||||||||||||||||| ||||||  || || ||||||||||| |||||| | ||||||||||||| |||||||| ||||||| |||||||||    
T  15531497 ttcaggatcacttttgtctacaggagcgcttctcttcagatgctttaagctttc-tttttgttgattcatttgctcttttttgttattccagaac 15531404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 9718017 - 9718222
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||||||||||||||||||||| | ||||| |||||||| | ||||||||| ||||||| |||| ||||||||||||||||||| |||    
T  9718017 tgaagctttaagtcttgcatctcctgatgaactagagcttctagtgatctttaacttctgatgggatgcttatgataaacttgcttctgatgacgtcatc 9718116  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  ||| || ||| |||||||||||||| | | || |||||| |||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  9718117 acttcaagagcac-tttgtcttcaggagtagttctcttcagacgctttaagcttcc-tttttgttgattcctttgctctcttttgttcttctagaaccta 9718214  T
Q  201 atgatgat 208  Q
    | ||||||    
T  9718215 acgatgat 9718222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 21625274 - 21625468
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||| ||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||| |||    
T  21625274 tgaagctgtaagtcttgcatctcctgatgag--acaacttctggtgatcttcagcttctgatgagatgcttatgatgaacttgcctctgatg-cgtcatc 21625370  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    |  |||||| ||||||||||||||| ||  || || |||||||||||||||||||| | ||||||||||| ||| |||||||||||||||| |||||||    
T  21625371 acttcaggagcacttttgtcttcagaagcgcttctcttcagatgcttcaagcttcc-tatttgttgattcattttctctcttttgttcttcgagaacct 21625468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 24117003 - 24117201
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctga-tgagatgcttctgatgaacttgcttctgatgacgttat 99  Q
    |||||||||||||||||||||| |||||||||| || ||||||||||||||  |||||| |  ||||||||||||||||||||| |||||||||||| ||    
T  24117003 tgaagctttaagtcttgcatcttctgatgaacttcatcttctggtgatctt--gcttctaaccgagatgcttctgatgaacttgtttctgatgacgtcat 24117100  T
Q  100 cagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    ||  |||||| ||| |||| ||||||||| ||| || ||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||| |||||    
T  24117101 cacttcaggagcac-tttgacttcaggagcacttctcttcagatgctttaagcttcc-tttttgttgattccttagctctcttttgttcttccataacct 24117198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 23284738 - 23284936
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||||||||||||| || ||||| | ||||||| |||||||||||||||||||| |||||||||||||||||||| | |||    
T  23284738 tgaagctttaagtcttgcatctcctgatgaacttcagcttctagcgatcttctgcttctgatgagatgcttctaatgaacttgcttctgatgacatcatc 23284837  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||| | |||  ||| ||||||||| ||| || |||||||| ||||||||||| |||||||||||||| | | |||||||||||||||||||| |||    
T  23284838 acttcagaagcac--ttgacttcaggagcacttctcttcagatgtttcaagcttcc-tttttgttgattccatagttctcttttgttcttccagaagcta 23284934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 25597653 - 25597841
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||    
T  25597653 tgaagctttaagtcttgcatgtcctgatgaactacaacttctggtgatcttcagcttatgatgagatgcttctgatgaacttgcttcagatgacgtcatc 25597752  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |                  ||||||||| ||| || |||||||||||  ||||||| |||||||||||||| |||||||||||| |||||| ||||||||    
T  25597753 a------------------cttcaggagcacttctcttcagatgcttttagcttcc-tttttgttgattccattgctctcttttattcttctagaaccta 25597833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 12715394 - 12715205
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||                ||||||||||||||| ||||||||||||| |||    
T  12715394 tgaagctttaagtcttgcatctcctgatgaactacaacttctagtgatctt----------------gcttctgatgaacttccttctgatgacgtcatc 12715311  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  || ||| |||||||||||||||||| ||| || ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||  ||||    
T  12715310 acttc-ggaacacttttgtcttcaggagcacttctcttcagatgcttcaagcttcct-ttttgttgatttctttgctctcttttgttcttccaggtccta 12715213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 13602346 - 13602534
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||||||||||||||||||||| | ||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||    
T  13602346 tgaagctttaagtcttgcatctcctgatgaactatagcttcttgtgatcttcggcttttgatgagatgcttctgatgaacttgcttctgatgacgtcatc 13602445  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |                  ||||||||| ||| || |||| | | || |||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  13602446 a------------------cttcaggagcacttctcttcaaacggtttaagcttcc-tttttgttgattccttttctctcttttgttcttccagaaccta 13602526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 69 - 199
Target Start/End: Complemental strand, 34451592 - 34451463
Alignment:
Q  69 cttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgat 168  Q
    ||||| |||||||||||||||||||||| ||||  |||| | ||||||||||||||||||  || || ||||||||||||||||||||| ||||| ||||    
T  34451592 cttctaatgaacttgcttctgatgacgtcatcacttcagaagcacttttgtcttcaggagcgcttctcttcagatgcttcaagcttcct-ttttgctgat 34451494  T
Q  169 tcctttgctctcttttgttcttccagaacct 199  Q
    |||||||||||||||||||||||||||||||    
T  34451493 tcctttgctctcttttgttcttccagaacct 34451463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 19624153 - 19624341
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||| |||||||||||||||||||| || ||||||||||||||  | |||||||||||||||||||||||               ||| |||    
T  19624153 tgaagctttaagacttgcatctcctgatgaacttcagcttctggtgatctt--gtttctgatgagatgcttctgatga---------------cgtcatc 19624235  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  | |||| |||||| | ||||||||| ||| || |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  19624236 actttaggagcacttt-gacttcaggagcacttctcttcagatgcttcaagcttcctttt-tgttgattccttagctctcttttgttcttccagaaccta 19624333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 115 - 208
Target Start/End: Original strand, 19086437 - 19086529
Alignment:
Q  115 tttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaatgatgat 208  Q
    |||| ||||||||| ||| || |||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||    
T  19086437 tttgacttcaggagcacttctcttcagacgcttcaagcttcctttt-tgttgattccttagctctcttttgttcttccagaacctaataatgat 19086529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 193
Target Start/End: Original strand, 18435732 - 18435938
Alignment:
Q  3 aagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatg-agatgcttctgatgaacttgcttctgatgacgttatca 101  Q
    |||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||| |  |||||||  || ||| |||||||||||||| | ||    
T  18435732 aagctttaagtcttgcatctcctgatgaactagagcttctagtgatcttcagcttctgatgaacttgcttctagtggactagcttctgatgacgtcacca 18435831  T
Q  102 gctcaggatcact----------------tttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttg 185  Q
      |||||| ||||                |||||||||||||| | | || ||||||||||| |||||||| ||||||||||||||||| |||||| |||    
T  18435832 cttcaggagcactttgtgttcaggagcactttgtcttcaggagcagttctcttcagatgctttaagcttcc-tttttgttgattccttttctctctattg 18435930  T
Q  186 ttcttcca 193  Q
    ||||||||    
T  18435931 ttcttcca 18435938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 80 - 208
Target Start/End: Original strand, 15302422 - 15302550
Alignment:
Q  80 cttgcttctgatgacgttatcagctcaggatcactttt-gtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctc 178  Q
    ||||||||||||||||| ||||  |||||| ||||||| ||||||||||| ||| || |||||| || | ||| |||| |||| ||||||||||||||||    
T  15302422 cttgcttctgatgacgtcatcacttcaggagcactttttgtcttcaggagcacttctcttcagacgccttaagtttccatttt-gttgattcctttgctc 15302520  T
Q  179 tcttttgttcttccagaacctaatgatgat 208  Q
    |||||| |||||| |||||||||| |||||    
T  15302521 tctttttttcttctagaacctaataatgat 15302550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 14100330 - 14100251
Alignment:
Q  120 cttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    ||||||||| ||| || | ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  14100330 cttcaggagtacttctctccagatgcttcaagcttccttttt-gttgattccattgctctcttttgttcttccagaaccta 14100251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 26972203 - 26972107
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatg-agatgcttctgatgaacttgcttctgatgacgt 96  Q
    ||||||||||||||||||||||||||||||| || | ||||||||||| ||| |||||||||| |  ||||||| || |||||||||||||||||||    
T  26972203 tgaagctttaagtcttgcatctcctgatgaaatagagcttctggtgattttctgcttctgatgaacttgcttctaataaacttgcttctgatgacgt 26972107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 68 - 202
Target Start/End: Complemental strand, 20112621 - 20112490
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    |||||||| |||||||||||||||||||| ||||  ||| || |||||  | ||| ||||| ||| || || |||||||||||||||||||||| |||||    
T  20112621 gcttctgaagaacttgcttctgatgacgtcatcacttcatgaacactt--gactttaggagcacttctctttagatgcttcaagcttccttttt-gttga 20112525  T
Q  168 ttcctttgctctcttttgttcttccagaacctaat 202  Q
    |||| | || |||| ||||||||||||||||||||    
T  20112524 ttccatagccctctcttgttcttccagaacctaat 20112490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 15954928 - 15955052
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    ||||||||| ||||||||||||||||||| | ||  |||||| |||||| ||||| ||||| | |  | |||||| |||| |||||||| ||||||||||    
T  15954928 gcttctgataaacttgcttctgatgacgtcaccacttcaggagcacttt-gtcttaaggagcagtttttttcagacgctttaagcttccctttttgttga 15955026  T
Q  168 ttcctttgctctcttttgttcttcca 193  Q
    |||||||||||| | |||||||||||    
T  15955027 ttcctttgctctttattgttcttcca 15955052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 21618418 - 21618512
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgatgacgt 96  Q
    |||||||||||||  ||||||| ||||||||||||| |||||||||||  ||||||||||||  |  ||||||||||||||||||||||||||||||    
T  21618418 tgaagctttaagt--tgcatcttctgatgaactacagcttctggtgattctcagcttctgataaacttgcttctgatgaacttgcttctgatgacgt 21618512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 18383965 - 18384017
Alignment:
Q  156 cttttttgttgattcctttgctctcttttgttcttccagaacctaatgatgat 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18383965 cttttttgttgattcctttgctctcttttgttcttccagaacctaataatgat 18384017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 22076380 - 22076288
Alignment:
Q  3 aagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatg-agatgcttctgatgaacttgcttctgatgacgt 96  Q
    |||||||||||  ||||||||||||||||||||| |||||||||||   |||||||||||| |  |||||||||||| |||||||||||||||||    
T  22076380 aagctttaagt--tgcatctcctgatgaactacatcttctggtgattcacagcttctgatgaacttgcttctgatgaccttgcttctgatgacgt 22076288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 32544439 - 32544502
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||||||||||||||||||||||| | ||| ||||||| |||||||||||||||    
T  32544439 tgaagctttaagtcttgcatctcctgatgaactagagcttatggtgattttcagcttctgatga 32544502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 68 - 190
Target Start/End: Complemental strand, 16265074 - 16264954
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    |||||||||||||||||||||||||||||   ||  |||||| |||||| ||||||||||| | |  | ||||||||||| | | ||||||||| |||||    
T  16265074 gcttctgatgaacttgcttctgatgacgtcgccacttcaggagcacttt-gtcttcaggagcagttttcttcagatgctttaggattccttttt-gttga 16264977  T
Q  168 ttcctttgctctcttttgttctt 190  Q
    |||||||||||||| ||||||||    
T  16264976 ttcctttgctctctattgttctt 16264954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 15987503 - 15987567
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaat 202  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||| || |||||||||||    
T  15987503 ttcagatgcttcaagcttcctttt-tgttgattccttagctctcttttgttttttcagaacctaat 15987567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 21235338 - 21235461
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    |||||||||||||||||||||||||||||    |  |||||| |||||| ||||||||||| | |  | |||||| |||| ||||||||||||| || ||    
T  21235338 gcttctgatgaacttgcttctgatgacgtcgctacttcaggagcacttt-gtcttcaggagcagttttcttcagacgctttaagcttccttttt-gtaga 21235435  T
Q  168 ttcctttgctctcttttgttcttcca 193  Q
    |||||||||||||| |||||||||||    
T  21235436 ttcctttgctctctattgttcttcca 21235461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 22802327 - 22802376
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22802327 ttgcatctcctgatgaactacaacttctggtgattttcagcttctgatga 22802376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 19086325 - 19086377
Alignment:
Q  4 agctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagct 56  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  19086325 agctttaagtcttgcatctcctgatgaacttcagcttctggtgatcttcagct 19086377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 19689008 - 19689087
Alignment:
Q  120 cttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    ||||||||| ||  || |||||| ||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  19689008 cttcaggagcacatctcttcagacgcttcaaacttcctttt-tgttgattcatttgctctcttttgttcttccagaaccta 19689087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 199
Target Start/End: Original strand, 32544555 - 32544638
Alignment:
Q  115 tttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    |||||||||||||| | | || |||||| |||| |||||||||||| |||||||||||||||||||| ||||||||||| |||||    
T  32544555 tttgtcttcaggagcagttctcttcagacgctttaagcttcctttt-tgttgattcctttgctctctattgttcttccataacct 32544638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 59 - 193
Target Start/End: Complemental strand, 10640353 - 10640222
Alignment:
Q  59 tgatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttcctt 158  Q
    ||||||| |||||||||||||||||||||||||||||| ||||  |||||| |||  ||| |||||| |   ||  | |||| ||||||||||||||| |    
T  10640353 tgatgaggtgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcac--ttgacttcagaacctcttttcttcatatgcttcaagcttcc-t 10640257  T
Q  159 ttttgttgattcctttgctctcttttgttcttcca 193  Q
    | ||||||||| | |||||||| ||||||||||||    
T  10640256 tcttgttgatttcattgctctcatttgttcttcca 10640222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 19470867 - 19470941
Alignment:
Q  25 tgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatca 101  Q
    |||||| || |||||||| ||||| ||  |||||||||||| |||||||||||||||||||||||||||||| ||||    
T  19470867 tgatgatcttcaacttcttgtgatgtt--gcttctgatgaggtgcttctgatgaacttgcttctgatgacgtcatca 19470941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 20730628 - 20730505
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    |||| |||||||||||||||||||||||| |  |  |||||| |||||| ||||||| ||| | |  | |||||| |||| ||||||||||||| |||||    
T  20730628 gcttatgatgaacttgcttctgatgacgtcactacttcaggagcacttt-gtcttcatgagcagttttcttcagacgcttaaagcttccttttt-gttga 20730531  T
Q  168 ttcctttgctctcttttgttcttcca 193  Q
    || ||||||||||| |||||||||||    
T  20730530 tttctttgctctctattgttcttcca 20730505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 29918190 - 29918250
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatg 63  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||| |||  ||||||||||    
T  29918190 tgaagctttaagtcttgcatctcctgatgaactacagcttctgatgaactt--gcttctgatg 29918250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 33351853 - 33351728
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    ||||||||||||||||||||||||||| | ||||  ||| || ||| |||||||||||||| | |  | |||||| |||| |||||||| ||||||||||    
T  33351853 gcttctgatgaacttgcttctgatgacatcatcacttcaagagcac-tttgtcttcaggagcagttttcttcagacgctttaagcttccctttttgttga 33351755  T
Q  168 ttcctttgctctct-tttgttcttcca 193  Q
    |    ||||||||| ||||||||||||    
T  33351754 tgtacttgctctctatttgttcttcca 33351728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 16336313 - 16336381
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgctt 86  Q
    |||||||||||||||| |||||||||||||||||  ||||||||||||   |  ||||||||||||||||||    
T  16336313 ttgcatctcctgatgatctacaacttctggtgattctcagcttctgat---aaacttctgatgaacttgctt 16336381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 19833005 - 19832915
Alignment:
Q  3 aagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga-gatgcttctgatgaacttgcttctgatgac 94  Q
    |||||||||||  ||||||||||||||||||||| |||||||||||  |||||||||||| |   |||||  |||||||||| ||||||||||    
T  19833005 aagctttaagt--tgcatctcctgatgaactacatcttctggtgattctcagcttctgataatcttgctttggatgaacttgtttctgatgac 19832915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 16877387 - 16877448
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||  ||||||||||||||||||||||||| |||||||   |||||||||||||    
T  16877387 tgaagctttaagt--tgcatctcctgatgaactacaacttttggtgattcacagcttctgatga 16877448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 17608160 - 17608104
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    ||||||||||| | |||||  ||||||||||||| ||||||||||||||||||||||    
T  17608160 ttcagatgctttaggcttctctttttgttgattcatttgctctcttttgttcttcca 17608104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 120 - 208
Target Start/End: Original strand, 18378545 - 18378632
Alignment:
Q  120 cttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaatgatgat 208  Q
    ||||||||| ||| || || ||| | || |||||||||||| ||||||||||||| ||||||||||||||||||  ||||||| |||||    
T  18378545 cttcaggagcacttctcttaagacgttttaagcttcctttt-tgttgattcctttactctcttttgttcttccaagacctaataatgat 18378632  T

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Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 34451643 - 34451595
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatc 49  Q
    |||| ||||||||||||||||||||||||||||| | ||||||||||||    
T  34451643 tgaatctttaagtcttgcatctcctgatgaactagagcttctggtgatc 34451595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 26943789 - 26943851
Alignment:
Q  54 gcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttt 116  Q
    |||||| ||||| ||||||||| |||||||||||||||||||| ||||  |||||| ||||||    
T  26943789 gcttctaatgaggtgcttctgacgaacttgcttctgatgacgtcatcacttcaggagcacttt 26943851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 26972050 - 26971989
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    |||||| |||| ||| ||||||||| ||||||||||||||||||  |||||||||||||||||    
T  26972050 ttcagacgctttaagattccttttt-gttgattcctttgctctccattgttcttccagaacct 26971989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 21128539 - 21128596
Alignment:
Q  137 ttcagatgcttcaagcttcctttt-ttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||||||||| || || || || |||||||||||||||||||||||||||||||||    
T  21128539 ttcagatgcttctaggtttctcttcttgttgattcctttgctctcttttgttcttcca 21128596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 17381739 - 17381795
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||| |||| |||||||| ||||||||||||||| |||||| | |||||||||||    
T  17381739 ttcagacgctttaagcttccctttttgttgattcctatgctctttattgttcttcca 17381795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 19065951 - 19065892
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    ||||||||||||||||||||||||||||| ||||  |||| | ||| ||||||||||||||    
T  19065951 gcttctgatgaacttgcttctgatgacgtcatcacttcagaagcac-tttgtcttcaggag 19065892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 20112672 - 20112624
Alignment:
Q  3 aagctttaagtcttgcatctcctgatgaactacaacttctggtgatctt 51  Q
    ||||||||||||||||||||| ||||||||| || |||| |||||||||    
T  20112672 aagctttaagtcttgcatctcttgatgaacttcagcttcaggtgatctt 20112624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 14100415 - 14100373
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctg 43  Q
    |||| |||||||||||||||||||||||||||| || ||||||    
T  14100415 tgaaactttaagtcttgcatctcctgatgaacttcagcttctg 14100373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 16877523 - 16877585
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    |||||| |||| |||| ||| |||||||| ||||||||||||| | |||||||||||| ||||    
T  16877523 ttcagacgctttaagcctccctttttgttaattcctttgctctttattgttcttccaggacct 16877585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 19065987 - 19065941
Alignment:
Q  18 catctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||||| || ||||||||||| | |||||||||||||    
T  19065987 catctcctgatgaactgcagcttctggtgatatacagcttctgatga 19065941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 19832924 - 19832867
Alignment:
Q  70 ttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    ||||||||| ||||||||||||||||| ||||  |||||| ||| ||||||||||||||    
T  19832924 ttctgatgaccttgcttctgatgacgtcatcacttcaggagcac-tttgtcttcaggag 19832867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 20487880 - 20487778
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagat-gcttctgatgaacttgcttctgatgacgttatcagctcaggatcac 113  Q
    |||||||  |||||||||| |||||||| ||||| || |||||||||| |  | ||||||||| |||| | |||||||||||| ||||  |||||| |||    
T  20487880 ttgcatcctctgatgaactgcaacttctagtgatttttagcttctgataaacttgcttctgattaactcgtttctgatgacgtcatcacttcaggagcac 20487781  T
Q  114 ttt 116  Q
    |||    
T  20487780 ttt 20487778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 11525448 - 11525391
Alignment:
Q  137 ttcagatgcttcaagcttcctttt-ttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||||||||| || || || || |||||||||| ||||||||||||||||||||||    
T  11525448 ttcagatgcttctaggtttctcttcttgttgattcatttgctctcttttgttcttcca 11525391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 78
Target Start/End: Complemental strand, 14100384 - 14100355
Alignment:
Q  49 cttcagcttctgatgagatgcttctgatga 78  Q
    ||||||||||||||||||||||||||||||    
T  14100384 cttcagcttctgatgagatgcttctgatga 14100355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 16265113 - 16265064
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||| ||| ||||| || ||||||||||| |||||||||||||||    
T  16265113 ttgcatctcttgacgaactgcagcttctggtgattttcagcttctgatga 16265064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 17381653 - 17381713
Alignment:
Q  67 tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    ||||| |||||||||||||||||||||||| | ||  |||||| ||| ||||||||||||||    
T  17381653 tgcttttgatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtcttcaggag 17381713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 101
Target Start/End: Complemental strand, 17608247 - 17608214
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatca 101  Q
    ||||||||||||||||||||||||||||| ||||    
T  17608247 gcttctgatgaacttgcttctgatgacgtcatca 17608214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 17608286 - 17608237
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||| ||||||||||| | ||||||||||| | |||||||||||||    
T  17608286 ttgcatcttctgatgaactatagcttctggtgatatacagcttctgatga 17608237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 197
Target Start/End: Original strand, 25592838 - 25592886
Alignment:
Q  148 caagcttccttttttgttgattcctttgctctcttttgttcttccagaac 197  Q
    |||||||||||||| || |||||| |||||||| ||||||||||||||||    
T  25592838 caagcttccttttt-gtagattccattgctctcatttgttcttccagaac 25592886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 96
Target Start/End: Original strand, 26589847 - 26589876
Alignment:
Q  67 tgcttctgatgaacttgcttctgatgacgt 96  Q
    ||||||||||||||||||||||||||||||    
T  26589847 tgcttctgatgaacttgcttctgatgacgt 26589876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 139292 - 139233
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    ||||||||| |||||||||||||||| || ||||  |||||| ||| ||||||||||||||    
T  139292 gcttctgataaacttgcttctgatgatgtcatcatttcaggagcac-tttgtcttcaggag 139233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 147313 - 147254
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    ||||||||| |||||||||||||||| || ||||  |||||| ||| ||||||||||||||    
T  147313 gcttctgataaacttgcttctgatgatgtcatcatttcaggagcac-tttgtcttcaggag 147254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 12423446 - 12423505
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    ||||||||| ||||||||||||||||||| ||||  ||| || ||| ||||||||||||||    
T  12423446 gcttctgataaacttgcttctgatgacgtcatcacttcaagagcac-tttgtcttcaggag 12423505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 96
Target Start/End: Original strand, 16877438 - 16877466
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgt 96  Q
    |||||||||||||||||||||||||||||    
T  16877438 gcttctgatgaacttgcttctgatgacgt 16877466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 19482933 - 19482989
Alignment:
Q  38 cttctggtgatcttcagcttctgatgagat-gcttctgatgaacttgcttctgatga 93  Q
    ||||||||||||| |||||||| ||||  | ||||||||||||||||| ||||||||    
T  19482933 cttctggtgatctgcagcttctaatgaacttgcttctgatgaacttgcatctgatga 19482989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 20487741 - 20487686
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||| |||| ||||||| ||||||||||||||||||||| | | |||||||||||    
T  20487741 ttcagacgctttaagcttc-ttttttgttgattcctttgctttttattgttcttcca 20487686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 22386972 - 22387060
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatg-agatgcttctgatgaac-ttgcttctgatgacgttatca 101  Q
    |||||||| ||||||||||  | |||||||||||   |||||| ||||| |  |||||||||||||| |||||||||||||||| ||||    
T  22386972 ttgcatcttctgatgaactgtagcttctggtgatacacagcttatgatgaacttgcttctgatgaactttgcttctgatgacgtcatca 22387060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 22802434 - 22802489
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||| | || |||||||||||| ||||||||||||| |||||| |||||||||||    
T  22802434 ttcagacgttttaagcttcctttt-tgttgattcctttcctctctattgttcttcca 22802489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 4e-60; HSPs: 78)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 30667157 - 30667356
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  30667157 tgaagctttaattcttgcatctcctgatgaactacaacttctgatattcttcagcttctgatgagatgcttctgacgaacttgcttctgatgacgtcatc 30667256  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| ||| |||| |||| |||| ||| || |||||||||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||    
T  30667257 acttcaggagcac-tttgacttcgggagcacttctcttcagatgcttcaagcttcc-tttttgttgattcaattgctctctattgttcttccagaaccta 30667354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 3 - 208
Target Start/End: Complemental strand, 20568680 - 20568476
Alignment:
Q  3 aagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcag 102  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| | ||||| |||||||||||||||||||||||||||  ||||||| ||||     
T  20568680 aagctttaagtcttgcatctcctgatgaactacagcttctggtgatcttgaacttcttatgagatgcttctgatgaacttgcttcaaatgacgtcatcac 20568581  T
Q  103 ctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaat 202  Q
    |||| || |||||||||||||||||| |||  | |||||| |  | |||||||| ||||||||||||||||| |||||||||||||||| ||||||||||    
T  20568580 ctcatgagcacttttgtcttcaggagcacttatcttcagacgtcttaagcttcc-tttttgttgattcctttactctcttttgttcttcaagaacctaat 20568482  T
Q  203 gatgat 208  Q
     |||||    
T  20568481 aatgat 20568476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 25037191 - 25037001
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
T  25037191 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgt---- 25037096  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
          ||| || ||||| ||||| ||| ||| || ||||||||||| |||||| | ||||||||||||||||||||||||||| |||||||||||||||    
T  25037095 -----gggagca-ttttgacttcatgagcacttctcttcagatgctttaagctt-cgtttttgttgattcctttgctctctttttttcttccagaaccta 25037003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 25041298 - 25041108
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
T  25041298 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgt---- 25041203  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
          ||| || ||||| ||||| ||| ||| || ||||||||||| |||||| | ||||||||||||||||||||||||||| |||||||||||||||    
T  25041202 -----gggagca-ttttgacttcatgagcacttctcttcagatgctttaagctt-cgtttttgttgattcctttgctctctttttttcttccagaaccta 25041110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 22260578 - 22260778
Alignment:
Q  5 gctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagct 104  Q
    |||||||||||||||||||||||||| ||  |||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||| ||||  |    
T  22260578 gctttaagtcttgcatctcctgatgagctttaacttctggtgatcttc--cttctgatgagatgcttttgatgaacttgcttctgatgacgtcatcactt 22260675  T
Q  105 caggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaatga 204  Q
    ||||| || ||||||||||||||| ||| || |||||| || | || ||||| |||||||||||||||||||||||||||||||||| |||||||||| |    
T  22260676 caggagcatttttgtcttcaggagcacttctcttcagacgccttaaacttcc-tttttgttgattcctttgctctcttttgttcttctagaacctaataa 22260774  T
Q  205 tgat 208  Q
    ||||    
T  22260775 tgat 22260778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 9015302 - 9015106
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||||||||||||||||||||  |  |||||| ||||||| |||||||||||| || ||||||||||||||||||||||||||| |||    
T  9015302 tgaagctttaagtcttgcatctcctgatgaactttagtttctgg-gatcttctgcttctgatgagttgtttctgatgaacttgcttctgatgacgtcatc 9015204  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  ||||||||||||||  ||||| ||| ||| || ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  9015203 acttcaggatcactttt-acttcaagagcacttctcttcagatgcttcaagcttcc-attttgttgattcctttgctctcttttgttcttccagaaccta 9015106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 23235175 - 23235372
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||| |||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  23235175 tgaagctttaagtcttgcatctcatgatgaactagagcttctggtgattttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatc 23235274  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| ||| |||| ||||| ||| ||| || |||||| |||| |||||| | |||||||||||||  ||||||||||||||||||| ||||||||    
T  23235275 acttcaggagcac-tttgacttcaagagcacttctcttcagacgctttaagcttac-tttttgttgattcaattgctctcttttgttcttctagaaccta 23235372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 24850597 - 24850399
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||||||||| ||| || | |||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||| ||     
T  24850597 tgaagctttaagtcttgcatctcctgatgtacttcagcatctggtgatctttagcttctgatgaggtgcttctgatgaacttgcttctgacgacgtcatt 24850498  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| |||  ||| ||||||||| |||  | |||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||    
T  24850497 acttcaggagcac--ttgacttcaggagcacttttcttcagatgcttcaagcttcc-tttttgttgattccttagctctcttttgttcttcgagaaccta 24850401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 22188034 - 22187846
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  22188034 tgaagctttaagtcttgcatgtcctgatgaacttcaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatc 22187935  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |                  ||||||||| ||| || |||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||| ||||||    
T  22187934 a------------------cttcaggagcacttctcttcagatgcttcaagcttcc-tttttgctgattcctttgctctattttgttcttccataaccta 22187854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 68 - 202
Target Start/End: Original strand, 25829338 - 25829471
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    ||||||| ||| ||||||||||||||||| ||||  |||||| |||||||||||||||||| ||| || |||||| |||| |||||||| ||||||||||    
T  25829338 gcttctggtgatcttgcttctgatgacgtcatcacttcaggagcacttttgtcttcaggagcacttctcttcagacgctttaagcttcc-tttttgttga 25829436  T
Q  168 ttcctttgctctcttttgttcttccagaacctaat 202  Q
    |||||||||||||||||||||||||||||||||||    
T  25829437 ttcctttgctctcttttgttcttccagaacctaat 25829471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 21537180 - 21536982
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||||||||||||| || ||||| |||||||| | ||||||||||| |||||||| ||| ||||||||||||||||| ||     
T  21537180 tgaagctttaagtcttgcatctcctgatgaacttcatcttctagtgatctttaacttctgatgaggtgcttctggtgagcttgcttctgatgacgtcatt 21537081  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| |||  | | ||||||||| ||| || |||||||  || ||| |||| |||||||||||| | | ||||||||||||||||||| ||||||    
T  21537080 acttcaggagcac--tagacttcaggagcacttctcttcagatattttaagtttcc-tttttgttgatttcatagctctcttttgttcttccaaaaccta 21536984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 4 - 173
Target Start/End: Original strand, 40782642 - 40782808
Alignment:
Q  4 agctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagc 103  Q
    |||| ||||||||||||||||||||||| |  | ||||||||||||||  ||||||||||| ||||||||| ||||||||||||||||||||| ||||      
T  40782642 agctctaagtcttgcatctcctgatgaaatttagcttctggtgatctt--gcttctgatgaaatgcttctggtgaacttgcttctgatgacgtcatcact 40782739  T
Q  104 tcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctt 173  Q
    |||||| ||||||    |||||||| ||| || |||||||||||||||||||| ||||||||||||||||    
T  40782740 tcaggagcactttgactttcaggagcacttctcttcagatgcttcaagcttcc-tttttgttgattcctt 40782808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 22454922 - 22454725
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||  ||||| |||| ||||| || |||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||    
T  22454922 tgaagctttaagtctctcatcttctgaagaacttcagcttctggtgatcttcagcttctgatgaggtgcttctgatgagcttgcttctgacgacgttatc 22454823  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctc-tcttttgttcttccagaacct 199  Q
    |  ||| || |||  | | ||||||||| |||  | |||||||||||||||||||| |||||||||||| | | |||| |  ||||||||||||||||||    
T  22454822 acttcaagagcac--tagacttcaggagcacttttcttcagatgcttcaagcttcc-tttttgttgatttcatagctcttaatttgttcttccagaacct 22454726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 38781567 - 38781744
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||||||||  |||||||   ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  38781567 tgaagctttaagtcttgcatcctctgatgag--acatcttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatc 38781664  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    |                  |||||||||  || || |||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||    
T  38781665 a------------------cttcaggagcgcttctcttcagatgcttcaagcttcc-tttttgttgattcaattgctctcttttgttcttccagaacct 38781744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 10009681 - 10009569
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||    
T  10009681 tgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatcttt--cttctgatgagatgcttctgatgaacttgcttctgatgacgtcatc 10009584  T
Q  101 agctcaggatcactt 115  Q
    |  |||||| |||||    
T  10009583 acttcaggagcactt 10009569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 49 - 179
Target Start/End: Complemental strand, 28140520 - 28140391
Alignment:
Q  49 cttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttc 148  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||  |||||| |||||||| ||||||||| ||| || |||||| | |      
T  28140520 cttcagcttctgatgagatgcttctgatgaacttgcttttgatgacgtcatcacttcaggagcacttttgacttcaggagcacttctcttcagacgttct 28140421  T
Q  149 aagcttccttttttgttgattcctttgctct 179  Q
    ||||||||| ||||||||||||||| |||||    
T  28140420 aagcttcct-ttttgttgattccttagctct 28140391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 7609130 - 7609216
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctg 89  Q
    |||||||||||||||||||||||||||||||||  | ||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  7609130 tgaagctttaagtcttgcatctcctgatgaactttagcttctggtgatctt--gcttctgatgagatgcttctgatgaacttgcttctg 7609216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 104 - 208
Target Start/End: Original strand, 38631224 - 38631327
Alignment:
Q  104 tcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaatg 203  Q
    |||||| ||||| |||||||||||| ||| || ||||||||||||||||||| |||| |||||||| ||||||||||||||||| ||||||||||||||     
T  38631224 tcaggagcacttctgtcttcaggagcacttctcttcagatgcttcaagcttcatttt-tgttgatttctttgctctcttttgtttttccagaacctaata 38631322  T
Q  204 atgat 208  Q
    |||||    
T  38631323 atgat 38631327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 33074406 - 33074519
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcac 113  Q
    |||||||||||||||||||||||||||| |||||  ||||||||||||  |  |||||||||||||||||||||||||||||| ||||  |||||| |||    
T  33074406 ttgcatctcctgatgaactacaacttctagtgattctcagcttctgataaacttgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcac 33074505  T
Q  114 ttttgtcttcaggag 128  Q
     ||||||||||||||    
T  33074506 -tttgtcttcaggag 33074519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 22317762 - 22317976
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatg-agatgcttctgatgaacttgcttctgatgacgttat 99  Q
    ||||||||||||||||||||||| ||||||| || | ||||||||||| |||||||||||||| |  ||||| |||||||||||||| ||||||||| |     
T  22317762 tgaagctttaagtcttgcatctcttgatgaaatagagcttctggtgattttcagcttctgatgtacttgcttatgatgaacttgcttatgatgacgtcac 22317861  T
Q  100 cagctcaggatcact----------------tttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttt 183  Q
    ||  |||||| ||||                |||| ||||||||| | | || |||||| |||| |||||||| |||||||||||||||||||||||| |    
T  22317862 cacttcaggagcactttgtcttcagtagcactttgacttcaggagcagttctcttcagacgctttaagcttcc-tttttgttgattcctttgctctctat 22317960  T
Q  184 tgttcttccagaacct 199  Q
    |||||||| |||||||    
T  22317961 tgttcttctagaacct 22317976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 18376734 - 18376670
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaat 202  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  18376734 ttcagatgcttcaagcttccttttt-gttgattccttagctctcttttgttcttccagaacctaat 18376670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 28711578 - 28711454
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    ||||||||| ||||||||||||||||||| | ||  |||||| |||||| ||||||||||| | |  | |||| | |||| |||||||||||||||||||    
T  28711578 gcttctgataaacttgcttctgatgacgtcaccacttcaggagcacttt-gtcttcaggagcagttttcttcaaacgctttaagcttccttttttgttga 28711480  T
Q  168 ttcctttgctctcttttgttcttcca 193  Q
    |||||||||||| | |||||||||||    
T  28711479 ttcctttgctctttattgttcttcca 28711454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 19540584 - 19540659
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatga 78  Q
    ||||||||||||||||||||||| ||||||||| || ||||||||||||||  |||||||||||| ||||||||||||    
T  19540584 tgaagctttaagtcttgcatctcatgatgaacttcagcttctggtgatctt--gcttctgatgaggtgcttctgatga 19540659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 24576204 - 24576295
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgac 94  Q
    ||||||||||||| ||||||||||| |||||||  | ||||||||||||||  |||| |||||| |||||||||||||||| ||||||||||||    
T  24576204 tgaagctttaagtattgcatctcctaatgaactttagcttctggtgatctt--gcttatgatgatatgcttctgatgaactagcttctgatgac 24576295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 200
Target Start/End: Complemental strand, 39037521 - 39037391
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    ||||||||||||||||||||||||||||| ||||  |||| | |||||    |||||| || ||| || ||||||||||||||||||||| |||||||||    
T  39037521 gcttctgatgaacttgcttctgatgacgtcatcacttcagaagcacttaa--cttcagtagcacttctcttcagatgcttcaagcttcct-ttttgttga 39037425  T
Q  168 ttcctttgctctc-ttttgttcttccagaaccta 200  Q
    |||| | ||||||  |||||||||||||||||||    
T  39037424 ttccatagctctcaatttgttcttccagaaccta 39037391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 13963824 - 13963745
Alignment:
Q  120 cttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    ||||||||| ||| || |||||||| ||||| | |||||||| ||||||||||||||||||||||||||||||||||||||    
T  13963824 cttcaggagcacttcttttcagatgtttcaaacgtccttttt-gttgattcctttgctctcttttgttcttccagaaccta 13963745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 35743922 - 35743842
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgatgac 94  Q
    |||||||||||||||||||||| ||||||||||| ||||||||| |||  |  ||||||||||||||||||||||||||||    
T  35743922 ttgcatctcctgatgaactacagcttctggtgattttcagcttccgataaacttgcttctgatgaacttgcttctgatgac 35743842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 24377269 - 24377332
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||||||||||||||| ||||||||| || |||||||||||||| ||||||||||||    
T  24377269 tgaagctttaagtcttgcatctcttgatgaacttcagcttctggtgatctttagcttctgatga 24377332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 202
Target Start/End: Original strand, 30621437 - 30621554
Alignment:
Q  83 gcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctctt 182  Q
    |||||||||||||| ||||  |||||| |||||| | ||||  ||| ||| || || |||||||| |||||||||||| |||||||||| |||||||||     
T  30621437 gcttctgatgacgtcatcacttcaggagcacttt-gacttcgagagcacttctctttagatgcttgaagcttcctttt-tgttgattccattgctctcta 30621534  T
Q  183 ttgttcttccagaacctaat 202  Q
    ||||||||||||||||||||    
T  30621535 ttgttcttccagaacctaat 30621554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 202
Target Start/End: Original strand, 30624058 - 30624175
Alignment:
Q  83 gcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctctt 182  Q
    |||||||||||||| ||||  |||||| |||||| | ||||  ||| ||| || || |||||||| |||||||||||| |||||||||| |||||||||     
T  30624058 gcttctgatgacgtcatcacttcaggagcacttt-gacttcgagagcacttctctttagatgcttgaagcttcctttt-tgttgattccattgctctcta 30624155  T
Q  183 ttgttcttccagaacctaat 202  Q
    ||||||||||||||||||||    
T  30624156 ttgttcttccagaacctaat 30624175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 68 - 202
Target Start/End: Original strand, 24576284 - 24576416
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    ||||||||||| ||||||||||||||||| ||||  |||| | |||||| | ||||| ||  |||  | |||| ||| ||||||||||||||| ||||||    
T  24576284 gcttctgatgaccttgcttctgatgacgtcatcacttcagaagcacttt-gacttcatgaacacttatcttcatatgtttcaagcttcctttt-tgttga 24576381  T
Q  168 ttcctttgctctcttttgttcttccagaacctaat 202  Q
    |||| |||||| ||||| |||||||||||||||||    
T  24576382 ttccattgctccctttttttcttccagaacctaat 24576416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 30621384 - 30621447
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||| |||||| ||||||||||||||||| |||||||||||| ||||| |||||||||||||||    
T  30621384 tgaacctttaattcttgcatctcctgatgcactacaacttctagtgatattcagcttctgatga 30621447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 30624005 - 30624068
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||| |||||| ||||||||||||||||| |||||||||||| ||||| |||||||||||||||    
T  30624005 tgaacctttaattcttgcatctcctgatgcactacaacttctagtgatattcagcttctgatga 30624068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 200
Target Start/End: Original strand, 22272323 - 22272494
Alignment:
Q  24 ctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttc 123  Q
    ||||||| || || ||||||||||| ||  |||||||||||| || |||||||||||||| |||| ||||||| ||||  ||||||  |  |||| ||||    
T  22272323 ctgatgatcttcagcttctggtgatgtt--gcttctgatgaggtgtttctgatgaacttgtttctaatgacgtcatcacttcaggagta--tttgacttc 22272418  T
Q  124 aggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    || |   ||  | ||||| |||||||| ||||||| || ||||||||| |||||||| |||||||||||||||||||    
T  22272419 agaaactcttttcttcagttgcttcaaccttccttctt-gttgattccattgctctcatttgttcttccagaaccta 22272494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 20151915 - 20151792
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    |||||||||||||||| |||||||||||| |  |  |||||| ||| |||||||||||||| | |  | |||||| |||| |||||||| |||||||| |    
T  20151915 gcttctgatgaacttgtttctgatgacgtcactatttcaggagcac-tttgtcttcaggagcagttttcttcagacgctttaagcttcc-tttttgttaa 20151818  T
Q  168 ttcctttgctctcttttgttcttcca 193  Q
    || ||||||||||| |||||||||||    
T  20151817 ttactttgctctctattgttcttcca 20151792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 22785597 - 22785472
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatg-agatgcttctgatgaacttgcttctgatgacgttat 99  Q
    |||||||||||||  ||||||||||||||||||  | |||||||||||   |||||||||||| |  ||||| ||||||||||||||||||||| || ||    
T  22785597 tgaagctttaagt--tgcatctcctgatgaactgtagcttctggtgattcacagcttctgatgaacttgcttttgatgaacttgcttctgatgatgtcat 22785500  T
Q  100 cagctcaggatcacttttgtcttcaggag 128  Q
    ||  ||| || ||| ||||||||||||||    
T  22785499 cacttcaagagcac-tttgtcttcaggag 22785472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 191
Target Start/End: Original strand, 24377356 - 24377426
Alignment:
Q  120 cttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttc 191  Q
    ||||||||| ||| || |||||||||||| ||||||| |||||||||||||  |||||||||||||||||||    
T  24377356 cttcaggagcacttctcttcagatgcttctagcttcc-tttttgttgattctattgctctcttttgttcttc 24377426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 44881451 - 44881513
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |||||||||||||||||||||| || ||||||| | |||||||| |||||||||||||||||||    
T  44881451 ttcagatgcttcaagcttccttctt-gttgatttcattgctctcatttgttcttccagaaccta 44881513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 6574003 - 6573880
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    ||||||||||||||||||||||||||||| |  |  | |||| |||||| |||||||| || | |  | |||||||| || ||||||||||||| ||| |    
T  6574003 gcttctgatgaacttgcttctgatgacgtcactactttaggagcacttt-gtcttcagaagcatttttcttcagatgttttaagcttccttttt-gttaa 6573906  T
Q  168 ttcctttgctctcttttgttcttcca 193  Q
    ||||||||||| || |||||||||||    
T  6573905 ttcctttgctccctattgttcttcca 6573880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 19540701 - 19540765
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaat 202  Q
    |||||| |||| |||||| ||||| |||||||||||| ||||||||||||||||||| ||||||||    
T  19540701 ttcagacgctttaagctttctttt-tgttgattccttagctctcttttgttcttccaaaacctaat 19540765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 25829302 - 25829363
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||| |||||||||||||||||||||||||  | ||||||||||||||  |||||||||||    
T  25829302 tgaagctctaagtcttgcatctcctgatgaactttagcttctggtgatctt--gcttctgatga 25829363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 28701009 - 28700953
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||| |||| |||||||| |||||||||||||||||||||| | |||||||||||    
T  28701009 ttcagacgctttaagcttccctttttgttgattcctttgctctttattgttcttcca 28700953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 10009582 - 10009524
Alignment:
Q  120 cttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctct 179  Q
    ||||||||| ||| || ||||||||||||||||||||| ||||||||||||||| |||||    
T  10009582 cttcaggagcacttctcttcagatgcttcaagcttcct-ttttgttgattccttagctct 10009524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 18376838 - 18376775
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||||  ||||| |  ||||||| |||||||||||||||||| |||||||||||    
T  18376838 tgaagctttaagtctctcatcttcaaatgaacttcaacttctggtgatcttctgcttctgatga 18376775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 19115427 - 19115489
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |||||| |||||||||||||||  | ||||||||| |||||||| |||||||||||||||||||    
T  19115427 ttcagacgcttcaagcttccttcct-gttgattccattgctctcatttgttcttccagaaccta 19115489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 20151967 - 20151905
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||| | |||||||||||||||| || || ||||||||||| |||||||||||||||    
T  20151967 tgaagctttaa-tgttgcatctcctgatgagctgcagcttctggtgattttcagcttctgatga 20151905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 34321856 - 34321777
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgatga 93  Q
    ||||||||||||||||| |||| ||||| |||||  ||||||||||||  |  |||||||||||||||||||| ||||||    
T  34321856 ttgcatctcctgatgaattacagcttctagtgattctcagcttctgataaacttgcttctgatgaacttgcttatgatga 34321777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 23595502 - 23595427
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatga 78  Q
    ||||||||||| |||| ||||| ||||||| || || |||||||||| |||  |||||||||||| ||||||||||||    
T  23595502 tgaagctttaattctttcatcttctgatgatcttcagcttctggtgaactt--gcttctgatgaggtgcttctgatga 23595427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 193
Target Start/End: Complemental strand, 24793761 - 24793727
Alignment:
Q  159 ttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||||||||||||||||||||||||||||||||    
T  24793761 ttttgttgattcctttgctctcttttgttcttcca 24793727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 193
Target Start/End: Complemental strand, 24814336 - 24814302
Alignment:
Q  159 ttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||||||||||||||||||||||||||||||||    
T  24814336 ttttgttgattcctttgctctcttttgttcttcca 24814302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 6574042 - 6573993
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||| |||||||||| |||||||| ||||| |||||||||||||||    
T  6574042 ttgcatcttctgatgaactgcaacttctagtgattttcagcttctgatga 6573993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 44840639 - 44840699
Alignment:
Q  67 tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    |||||||||||| ||||||||||||||||| ||||  |||||| ||| ||||||||||||||    
T  44840639 tgcttctgatgatcttgcttctgatgacgtcatcacttcaggagcac-tttgtcttcaggag 44840699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 1084364 - 1084420
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    ||||||||||| | |||||  || ||| |||||||||||||||||||||||||||||    
T  1084364 ttcagatgctttaggcttctcttcttgctgattcctttgctctcttttgttcttcca 1084420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 1586974 - 1586913
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||  | |||||||||||||||| || |||||||||||  ||||||||||||||    
T  1586974 tgaagctttaagt--tccatctcctgatgaactccagcttctggtgattctcagcttctgatga 1586913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 6392854 - 6392913
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    ||||||||| ||||||||||||||||||| ||||  |||||| ||| ||||||||||||||    
T  6392854 gcttctgataaacttgcttctgatgacgtcatcacttcaggagcac-tttgtcttcaggag 6392913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13963910 - 13963850
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctga 61  Q
    ||||||||||| |||||||||| ||||||||||| | ||||| |||||||| | |||||||    
T  13963910 tgaagctttaaatcttgcatctactgatgaactagagcttctagtgatctttaacttctga 13963850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 22776196 - 22776137
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    ||||||||||||||||||||| ||||||| ||||  |||||| ||| ||||||||||||||    
T  22776196 gcttctgatgaacttgcttctaatgacgtcatcacttcaggagcac-tttgtcttcaggag 22776137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 22781574 - 22781515
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    ||||||||||||||||||||| ||||||| ||||  |||||| ||| ||||||||||||||    
T  22781574 gcttctgatgaacttgcttctaatgacgtcatcacttcaggagcac-tttgtcttcaggag 22781515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 28550809 - 28550750
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    ||||||||||||||||||| ||||||||| ||||  |||||| ||| ||||||||||||||    
T  28550809 gcttctgatgaacttgcttatgatgacgtcatcacttcaggagcac-tttgtcttcaggag 28550750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 30557170 - 30557111
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    |||| |||||||||||||||||||||||| ||||  |||||| ||| ||||||||||||||    
T  30557170 gcttttgatgaacttgcttctgatgacgtcatcaattcaggagcac-tttgtcttcaggag 30557111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 31800683 - 31800627
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||| |||| |||||||| |||||||||||||||||| ||| | |||||||||||    
T  31800683 ttcagacgctttaagcttccctttttgttgattcctttgttctttattgttcttcca 31800627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 40332297 - 40332356
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    ||||||||||||||||||| ||||||||| ||||  |||||| ||| ||||||||||||||    
T  40332297 gcttctgatgaacttgcttatgatgacgtcatcacttcaggagcac-tttgtcttcaggag 40332356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 200
Target Start/End: Original strand, 20569774 - 20569824
Alignment:
Q  149 aagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    ||||||||||||| || |||||| |||||||| |||||||||||||||||||    
T  20569774 aagcttccttttt-gtagattccattgctctcatttgttcttccagaaccta 20569824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 30557239 - 30557160
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatg-agatgcttctgatgaacttgcttctgatga 93  Q
    |||||||  |||||||||| || ||||||||||| || ||||||||||| |  ||||||||||||||| |||| ||||||    
T  30557239 ttgcatcctctgatgaactgcagcttctggtgatatttagcttctgatgaacttgcttctgatgaactcgcttttgatga 30557160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 31327885 - 31327806
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgatga 93  Q
    ||||||||||||||||||| || |||||||||||   |||||||||||  |  ||||||||||||||| |||| ||||||    
T  31327885 ttgcatctcctgatgaactgcagcttctggtgattcacagcttctgataaacttgcttctgatgaactagcttatgatga 31327806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 31334606 - 31334527
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgatga 93  Q
    ||||||||||||||||||| || |||||||||||   |||||||||||  |  ||||||||||||||| |||| ||||||    
T  31334606 ttgcatctcctgatgaactgcagcttctggtgattcacagcttctgataaacttgcttctgatgaactagcttatgatga 31334527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 39037574 - 39037511
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||| |||||||||  ||||| ||||| ||||  |||||| ||||||||||||||||||||||    
T  39037574 tgaagttttaagtctctcatcttctgatcaactttaacttccggtgatcttcagcttctgatga 39037511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 22802693 - 22802750
Alignment:
Q  69 cttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcagga 127  Q
    |||||||||| ||||||||||||||||| ||||  |||||| ||| |||||||||||||    
T  22802693 cttctgatgaccttgcttctgatgacgtcatcacttcaggagcac-tttgtcttcagga 22802750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 193
Target Start/End: Complemental strand, 23392450 - 23392416
Alignment:
Q  159 ttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||||||||| ||||||||||||||||||||||    
T  23392450 ttttgttgattcttttgctctcttttgttcttcca 23392416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 195
Target Start/End: Complemental strand, 26618896 - 26618847
Alignment:
Q  145 cttcaagcttccttttttgttgattcctttgctctcttttgttcttccaga 195  Q
    |||||||||||||| || ||||||||| |||||||| ||||||||||||||    
T  26618896 cttcaagcttccttctt-gttgattccattgctctcatttgttcttccaga 26618847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 45086932 - 45086870
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    |||||| |||| |||||||| |||||||||| | ||||||||| | ||||||||||| |||||    
T  45086932 ttcagacgctttaagcttccctttttgttgacttctttgctctttattgttcttccaaaacct 45086870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 1084188 - 1084237
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||| |||||||||||||  |||||||||| | |||||||||||||    
T  1084188 ttgcatcttctgatgaactacagtttctggtgatatacagcttctgatga 1084237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 25189638 - 25189718
Alignment:
Q  120 cttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctc-tcttttgttcttccagaaccta 200  Q
    ||||||||| |||  | |||||||||||||||||||| ||||||| |||||| | |||| |  |||||||||||||||||||    
T  25189638 cttcaggagcacttttgttcagatgcttcaagcttcc-tttttgtcgattccatagctcttaatttgttcttccagaaccta 25189718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 28550848 - 28550799
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||||||||||| || |||||||||||   |||||||||||||    
T  28550848 ttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatga 28550799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 128
Target Start/End: Complemental strand, 31800769 - 31800709
Alignment:
Q  67 tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    |||||||||| ||||||||||||||||||  ||||  |||||| ||| ||||||||||||||    
T  31800769 tgcttctgataaacttgcttctgatgacgccatcacttcaggagcac-tttgtcttcaggag 31800709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 18430729 - 18430674
Alignment:
Q  144 gcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    ||||||||||||||| || |||||||   |||||||| |||||||||||||||||||    
T  18430729 gcttcaagcttccttctt-gttgattatattgctctcatttgttcttccagaaccta 18430674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 21025240 - 21025208
Alignment:
Q  161 ttgttgattcctttgctctcttttgttcttcca 193  Q
    ||||||||||||||||||||||||||| |||||    
T  21025240 ttgttgattcctttgctctcttttgttgttcca 21025208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 41121551 - 41121492
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaac 197  Q
    |||||||||||||||||||| || ||||| ||||| ||||| || |||||||||| |||||    
T  41121551 ttcagatgcttcaagcttcc-ttcttgtttattccattgctttcatttgttcttcgagaac 41121492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 116; Significance: 6e-59; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 653 - 854
Alignment:
Q  5 gctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagct 104  Q
    |||||||||||||||||||||||||| ||  | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||  |    
T  653 gctttaagtcttgcatctcctgatgagctttagcttctggtgatcttcagcttctgatgagatgcttctgataaacttgcttctgatgacgtcatcactt 752  T
Q  105 caggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaatga 204  Q
    || || || ||||| ||||| ||| ||| || ||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||| |    
T  753 catgagca-ttttgacttcaagagcacttctcttcagatgctttaagcttcc-tttttgttgattcctttgctctcttttgtttttccagaacctaataa 850  T
Q  205 tgat 208  Q
    ||||    
T  851 tgat 854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 116; Significance: 6e-59; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 20908 - 20711
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||    
T  20908 tgaagctttaagtcttgcatctcttgatgaacttcaacttttggtgatcttcagcttctaatgagatgcttctgatgaacttgtttctgatgacgtcatc 20809  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| |||| ||  ||||||||| ||| || |||||| ||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  20808 acttcaggagcactatt-acttcaggagcacttctcttcagacgcttcaaacttcc-tttttgttgattccttagctctcttttgttcttccagaaccta 20711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 108; Significance: 3e-54; HSPs: 3)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 30398 - 30599
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||     ||||||||| |||||| ||||||||||||| |||||    
T  30398 tgaagctttaagtcttgcatctcctgatgaattacaacttctggagatcttcagcttct-----gatgcttcttatgaacctgcttctgatgactttatc 30492  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| |||||||||||||||||| ||| |  ||||||||||||||| || | |||||||||||| ||||||||||||||||||||||||  ||||    
T  30493 acttcaggagcacttttgtcttcaggagcacttcgcttcagatgcttcaagttttc-tttttgttgatttctttgctctcttttgttcttccaggtccta 30591  T
Q  201 atgatgat 208  Q
    || |||||    
T  30592 ataatgat 30599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 196
Target Start/End: Original strand, 10175 - 10235
Alignment:
Q  135 tattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaa 196  Q
    |||||||||||||||||||||| || ||||||||||  |||||||| || ||||||||||||    
T  10175 tattcagatgcttcaagcttcc-ttcttgttgattcaattgctctcattcgttcttccagaa 10235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 10076 - 10151
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatga 78  Q
    ||||||||||||| |  ||||| |||||||||| || ||||||||||| ||  |||||| ||||| ||||||||||||    
T  10076 tgaagctttaagtttctcatcttctgatgaacttcagcttctggtgatatt--gcttctaatgaggtgcttctgatga 10151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 108; Significance: 3e-54; HSPs: 5)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 60190 - 60397
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||||||||| ||||||||||  | ||||||||||||||  |||||| ||||||||||||| |||||||||| ||||||||||| |||    
T  60190 tgaagctttaagtcttgcatcttctgatgaactttagcttctggtgatctt--gcttcttatgagatgcttctaatgaacttgcatctgatgacgtcatc 60287  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| |||||||||||||| ||| | | || |||||| || | ||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  60288 acatcaggagcacttttgtcttcaagagcatttctcttcagacgccttaagcttcatttt-tgttgattcctttgctctcttttgttcttccagaaccta 60386  T
Q  201 atgatgatgtc 211  Q
    || ||||||||    
T  60387 ataatgatgtc 60397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 14 - 208
Target Start/End: Original strand, 115708 - 115898
Alignment:
Q  14 cttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcac 113  Q
    |||||||||||||||||||  || ||||||||||||||  ||||||||||||||||||||||| ||||||||| ||||||||| ||||  |||||| |||    
T  115708 cttgcatctcctgatgaacatcagcttctggtgatctt--gcttctgatgagatgcttctgataaacttgcttttgatgacgtcatcacttcaggagcac 115805  T
Q  114 ttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaatgatgat 208  Q
     |||| ||||||||||||  || || |||| |||| ||||||| ||||||||||||| |  |||||||||| |||||| |||||||||| |||||    
T  115806 -tttgacttcaggagaacatctctttagattcttctagcttcc-tttttgttgattcgtcagctctcttttattcttcgagaacctaataatgat 115898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 80 - 208
Target Start/End: Original strand, 8148 - 8275
Alignment:
Q  80 cttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctct 179  Q
    ||||||||||||||||| ||||  |||||| |||||||||||||||||| ||| || |||||| || | |||||| ||||| ||||||||||||||||||    
T  8148 cttgcttctgatgacgtcatcacttcaggagcacttttgtcttcaggagcacttctcttcagacgccttaagcttactttt-tgttgattcctttgctct 8246  T
Q  180 cttttgttcttccagaacctaatgatgat 208  Q
    ||||||||||||||||||||||| |||||    
T  8247 cttttgttcttccagaacctaataatgat 8275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 38 - 114
Target Start/End: Complemental strand, 151788 - 151714
Alignment:
Q  38 cttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcact 114  Q
    ||||||||||||||  |||||| ||||| |||||||||||||||||||||||||||||| ||||  |||||| ||||    
T  151788 cttctggtgatctt--gcttctcatgaggtgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcact 151714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 8100 - 8161
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||||| |||||||||||||||||||  | |||||||| |||||  |||||||||||    
T  8100 tgaagctttaagttttgcatctcctgatgaactttagcttctggttatctt--gcttctgatga 8161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 108; Significance: 3e-54; HSPs: 4)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 6135 - 5934
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||     ||||||||| |||||| ||||||||||||| |||||    
T  6135 tgaagctttaagtcttgcatctcctgatgaattacaacttctggagatcttcagcttct-----gatgcttcttatgaacctgcttctgatgactttatc 6041  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| |||||||||||||||||| ||| |  ||||||||||||||| || | |||||||||||| ||||||||||||||||||||||||  ||||    
T  6040 acttcaggagcacttttgtcttcaggagcacttcgcttcagatgcttcaagttttc-tttttgttgatttctttgctctcttttgttcttccaggtccta 5942  T
Q  201 atgatgat 208  Q
    || |||||    
T  5941 ataatgat 5934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 212529 - 212723
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||| ||||||||||||| |  | |||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||| ||     
T  212529 tgaagctttaagtcttggatctcctgatgaagtttagcttctgatgatctt--gcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatt 212626  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    |  |||||| ||| |||| ||||||||| ||| || |||||| | ||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  212627 acttcaggagcac-tttgacttcaggagcacttctcttcagacgtttcaagcttcc-tttttgttgattccttagctctcttttgttcttccagaacct 212723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 246133 - 246074
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    ||||||||||||||||||||||||||||| ||||  |||||| ||| ||||||||||||||    
T  246133 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcac-tttgtcttcaggag 246074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 246184 - 246123
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||  |||||||||||||||||| ||||||||||||||   |||||||||||||    
T  246184 tgaagctttaagt--tgcatctcctgatgaactgcaacttctggtgattcacagcttctgatga 246123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 101; Significance: 5e-50; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 36712 - 36516
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||| ||||||||| || ||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||    
T  36712 tgaagctttaagtcttgcatctcttgatgaacttcagcttctagtgatcttctgcttctgatgagatgcttctaatgaacttgcttctgatgacgtcatc 36613  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| |||| |   ||| ||||  ||| || |||||||||||||||||||||||| | |||||||| ||||||||||||||||||||| ||||||    
T  36612 acttcaggagcactat--actttaggatcacttctcttcagatgcttcaagcttccttttat-ttgattccattgctctcttttgttcttccataaccta 36516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 42293 - 42489
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||| ||||||||| || ||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||    
T  42293 tgaagctttaagtcttgcatctcttgatgaacttcagcttctagtgatcttctgcttctgatgagatgcttctaatgaacttgcttctgatgacgtcatc 42392  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| |||| |   ||| ||||  ||| || |||||||||||||||||||||||| | |||||||| ||||||||||||||||||||| ||||||    
T  42393 acttcaggagcactat--actttaggatcacttctcttcagatgcttcaagcttccttttat-ttgattccattgctctcttttgttcttccataaccta 42489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 9969 - 10164
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||| |||||||||||| |||||||| || ||||||||||||||  |||| |||||||||||||||||| ||||||||||||||||||| |||    
T  9969 tgaagctttaaatcttgcatctccagatgaacttcagcttctggtgatctt--gcttatgatgagatgcttctgattaacttgcttctgatgacgtcatc 10066  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| ||| |||| |||||| || | | || |||||||||||||||||||| |||||||||||||| || ||||||||||||||| |||||||||    
T  10067 acttcaggagcac-tttgacttcagaagcatttctcttcagatgcttcaagcttcc-tttttgttgattccattcctctcttttgttctttcagaaccta 10164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 723 - 553
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||| |||||||||||||||||||||||||||  | ||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||| |||    
T  723 tgaagttttaagtcttgcatctcctgatgaactttagcttctggtgatctt--gcttctgatgagatgcttctgatgaacttgcttctaatgacgtcatc 626  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattccttt 174  Q
    |  |||||| |||||||||||||||||| ||| || ||||||  ||| ||||||||| ||||||||||||||||    
T  625 acttcaggagcacttttgtcttcaggagcacttctcttcagacactttaagcttcct-ttttgttgattccttt 553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 94; Significance: 7e-46; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 5627 - 5431
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||| ||||||||||||||||||||||||| || |||| |||||||||  ||||||  ||||||||||||||||||||||||||||||||||| |||    
T  5627 tgaagctctaagtcttgcatctcctgatgaacttcagcttcaggtgatctt--gcttctagtgagatgcttctgatgaacttgcttctgatgacgtcatc 5530  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctc-ttttgttcttccagaacct 199  Q
    |  |||||| |||||||  ||||||||| ||| || |||||| |||||||| |||| |||| |||||||| ||||||||| |||||||||||||||||||    
T  5529 acttcaggagcactttt-acttcaggagcacttctcttcagacgcttcaaggttcc-ttttagttgattcatttgctctcattttgttcttccagaacct 5432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 91; Significance: 5e-44; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 377496 - 377314
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  377496 tgaagttttaagtcttgcatctcctgatgaactataacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatc 377397  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |                  ||||||||| ||| || ||||||  ||| |||||||| |||| ||||||||||| ||||||||||||||||||||||||||    
T  377396 a------------------cttcaggagcactactcttcagacactttaagcttcc-ttttagttgattccttagctctcttttgttcttccagaaccta 377316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 220411 - 220608
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||  |||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||     
T  220411 tgaagctttaagtctctcatctcctgatgaacttcagcttctggtgatcttcagcttctgatgaggtgcttctgatgaacttgcttctgatgacgtcatt 220510  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctc-ttttgttcttccagaacct 199  Q
    |  |||||| |||  ||| ||||||||| |||  | |||||| |||||||| |||| |||||||||||||| | ||||||  ||||||||| ||||||||    
T  220511 acttcaggagcac--ttgacttcaggagcacttttcttcagacgcttcaaggttcc-tttttgttgattccatagctctcaatttgttctttcagaacct 220607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 30652 - 30603
Alignment:
Q  159 ttttgttgattcctttgctctcttttgttcttccagaacctaatgatgat 208  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  30652 ttttgttgattcctttgctctcttttgttcttccagaacctaataatgat 30603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 200
Target Start/End: Complemental strand, 244151 - 243994
Alignment:
Q  38 cttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctat 137  Q
    ||||||||||| ||  |||||||||||| | ||| |||||||||||||| ||||||||| ||||  ||| || |||||  | |||||| |   ||  | |    
T  244151 cttctggtgatgtt--gcttctgatgaggtacttttgatgaacttgcttttgatgacgtcatcacttcatgagcactt--gacttcagaacctcttttct 244056  T
Q  138 tcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    ||||||||||||||||||||| || ||||||||| |||||||  |||||||||||||||||||    
T  244055 tcagatgcttcaagcttccttctt-gttgattccattgctctaatttgttcttccagaaccta 243994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 89; Significance: 7e-43; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 39599 - 39790
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||              |||||||||||||| ||||||     
T  39599 tgaagctttaaatcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgatga--------------acttgcttctgatgtcgttatg 39684  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  ||| || |||||| | ||||||||| ||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  39685 acttcaagagcacttt-gacttcaggagcacttctcttcagatgcttcaagcttcctttt-tgttgattcctttgctctcttttgttcttccagaaccta 39782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 137659 - 137850
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||              |||||||||||||| ||||||     
T  137659 tgaagctttaaatcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgatga--------------acttgcttctgatgtcgttatg 137744  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  ||| || |||||| | ||||||||| ||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  137745 acttcaagagcacttt-gacttcaggagcacttctcttcagatgcttcaagcttcctttt-tgttgattcctttgctctcttttgttcttccagaaccta 137842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 54 - 200
Target Start/End: Original strand, 159296 - 159438
Alignment:
Q  54 gcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagct 153  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||  |||||| ||||     | ||| ||| ||| |  |||||||||||||||||    
T  159296 gcttctgatgaggtgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactaaa--catcatgagcacttcc-ttcagatgcttcaagct 159392  T
Q  154 tccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    || ||| ||||||||||| |||||||| |||||||||||||||||||    
T  159393 tc-tttcttgttgattccattgctctcatttgttcttccagaaccta 159438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 81; Significance: 4e-38; HSPs: 3)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 49506 - 49687
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||               || |||    
T  49506 tgaagctttaagacttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaa---------------gtcatc 49590  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    |  |||||| |||||||||||||| ||| ||| || ||| || || | |||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  49591 acttcaggagcacttttgtcttcaagagcacttctcttc-gacgccttaagcttcc-tttttgttgattcctttgctctcttttgttcttccagcacct 49687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 32659 - 32845
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||| |||||              ||||||||||| ||||||||||||| |||    
T  32659 tgaagctttaagtcttgcatctcctgatgaactacaagttgtggtgatctttagctt--------------ctgatgaacttacttctgatgacgtcatc 32744  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| ||||||||||||||| || |||  | |||||| || | |||||||| ||||||||||||||||| |||||||||||||||| ||||||||    
T  32745 acttcaggagcacttttgtcttcagaagcacttttcttcagacgccttaagcttcc-tttttgttgattcctttactctcttttgttcttctagaaccta 32843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 269 - 181
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgatgacgttatcag 102  Q
    |||||||| |||||||| ||||  |||||||||| | ||||||||||| ||  |||||||||| ||||||||||||||||||| |||||    
T  269 ttgcatcttctgatgaagtacagtttctggtgatatacagcttctgatagacttgcttctgataaacttgcttctgatgacgtcatcag 181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 67 - 208
Target Start/End: Original strand, 13850 - 13990
Alignment:
Q  67 tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttg 166  Q
    |||||||||||||||||||||||||||| | || |  |||||| |||||||||||||||||| ||| || ||| || || | ||||||||||||  ||||    
T  13850 tgcttctgatgaacttgcttctgatgacatcattacttcaggagcacttttgtcttcaggagcacttctcttctgacgcattaagcttccttttc-gttg 13948  T
Q  167 attcctttgctctcttttgttcttccagaacctaatgatgat 208  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  13949 attcctttgctctcttttgttcttccagaacctaataatgat 13990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 4930 - 4742
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||| ||||||| || ||||| ||||||||| |||||||| || |||||||| |||||||||||||| |||||||||||||    
T  4930 tgaagctttaagtcttgcatctcttgatgaattaaaacttttggtgatctccagcttctaataagatgcttttgatgaacttgcttttgatgacgttatc 4831  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |                  ||||||||| ||| || |||||| |||| |||||||| ||||||||||||||||||||| |||||||||||| ||||||||    
T  4830 a------------------cttcaggagcacttctcttcagacgctttaagcttcc-tttttgttgattcctttgctcccttttgttcttctagaaccta 4750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 8 - 202
Target Start/End: Complemental strand, 13462 - 13272
Alignment:
Q  8 ttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagctcag 107  Q
    |||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||||||||||||||||| ||||| | ||||| | ||||  ||||    
T  13462 ttaagtcttgcatctc-tgatgaacttcagcttctggtgttcttcagcttctgatgagatgcttctgatgaacatgcttttaatgacatcatcacttcag 13364  T
Q  108 gatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaat 202  Q
    || |||  |    |||||||| ||| || |||||||||||||||||| ||||||||||||||| || ||| ||||||| | || |||||||||||    
T  13363 gagcac--taaatttcaggagcacttctcttcagatgcttcaagctt-cttttttgttgattctttagctttcttttggtttttcagaacctaat 13272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 27366 - 27185
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||||||||||||| || | ||||||||||||                |||||||||||||||||||||||||| || |||    
T  27366 tgaagctttaagtcttgcatctcctgatgaacttcagcatctggtgatctt----------------gcttctgatgaacttgcttctgatgatgtcatc 27283  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    |  |||||| |||||| | |||||| || ||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||    
T  27282 acttcaggagcacttt-gccttcagaagcacttctcttcagatgcttcaagcttccttttt-gttgattcctttgctctcttttgttatttcagaaccta 27185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 25908 - 25724
Alignment:
Q  5 gctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagct 104  Q
    |||||||||||||||||||||||||| ||  | ||||||||||||||||||||||||||||||| || | |||||| ||||||||||||||| ||||       
T  25908 gctttaagtcttgcatctcctgatgagctttagcttctggtgatcttcagcttctgatgagatgtttttcatgaacgtgcttctgatgacgtcatca--- 25812  T
Q  105 caggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaatga 204  Q
                   ||||||||| ||| || |||||| || | || ||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  25811 ---------------cttcaggagcacttctcttcagacgccttaatcttcc-tttttgttgattcctttgctctcttttgttcttccagaacctaataa 25728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 16004 - 16130
Alignment:
Q  53 agcttctgatgagatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagc 152  Q
    |||||||||||||||| |||||||||||||||||||||||| || ||||  ||| || |||||||| ||||||||| ||  || ||||||||||||||||    
T  16004 agcttctgatgagatggttctgatgaacttgcttctgatgatgtcatcacttcatgagcacttttgacttcaggagcacatctcttcagatgcttcaagc 16103  T
Q  153 ttccttttttgttgattcctttgctctc 180  Q
    |||| |||||||||||||||| ||||||    
T  16104 ttcc-tttttgttgattccttagctctc 16130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 15969 - 16001
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaact 33  Q
    |||||||||||||||||||||||||||||||||    
T  15969 tgaagctttaagtcttgcatctcctgatgaact 16001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 9338 - 9252
Alignment:
Q  6 ctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgac 94  Q
    |||||||||||||||||||||||||||| || ||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||    
T  9338 ctttaagtcttgcatctcctgatgaacttcagcttctggtgatctt--gcttctgatgagatgcttctgatgaactttcttctgatgac 9252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 9195 - 9117
Alignment:
Q  120 cttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    ||||||||  ||| || |||||| |||||||||||||  |||||||||||| |||||||||||||||||||||||||||||    
T  9195 cttcaggatcacttctcttcagacgcttcaagcttcc--ttttgttgattcatttgctctcttttgttcttccagaaccta 9117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 68 - 200
Target Start/End: Original strand, 1870 - 2001
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    ||||||| ||| ||||||||||||||||| ||||  |||||| || ||| ||||||||||| ||| || | ||||||||| |||||||| ||||| ||||    
T  1870 gcttctggtgatcttgcttctgatgacgtcatcacttcaggagcattttagtcttcaggagcacttctctgcagatgctttaagcttcc-tttttattga 1968  T
Q  168 ttcctttgctctcttttgttcttccagaaccta 200  Q
    ||||||||||||||||||||||||||| |||||    
T  1969 ttcctttgctctcttttgttcttccaggaccta 2001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 1834 - 1895
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||  |||||||||||    
T  1834 tgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatctt--gcttctgatga 1895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 67 - 200
Target Start/End: Original strand, 6230 - 6360
Alignment:
Q  67 tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttg 166  Q
    |||||||||||||||||||||||||||||| ||||  |||||| |||  ||| ||||||||| |||  | |||||||||||||||||||| || ||||||    
T  6230 tgcttctgatgaacttgcttctgatgacgtcatcacttcaggaacac--ttgacttcaggagcacttttcttcagatgcttcaagcttcc-ttcttgttg 6326  T
Q  167 attcctttgctctcttttgttcttccagaaccta 200  Q
    ||||| |||||||| |||||||||| ||||||||    
T  6327 attccattgctctcatttgttcttctagaaccta 6360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 22850 - 22951
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatg-agatgcttctgatgaacttgcttctgatgacgttat 99  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |  |||||||| || ||||| |||||||||||| ||    
T  22850 tgaagctttaagtcttgcatctcctgatgaactacagcctctggtgatcttcagcttctgatgaacttgcttctggtggacttgattctgatgacgtcat 22949  T
Q  100 ca 101  Q
    ||    
T  22950 ca 22951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 22952 - 23024
Alignment:
Q  120 cttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    ||||||||| | | || |||||| |||| ||||||| |||| ||||||||| |||||||||| |||||||||||    
T  22952 cttcaggagtagttctcttcagacgctttaagcttcatttt-tgttgattcttttgctctctattgttcttcca 23024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 7877 - 8059
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    ||||||||||||||||||||||||||||||| || | ||||||||||||||||              ||||||||||||||||||| | ||||||| | |    
T  7877 tgaagctttaagtcttgcatctcctgatgaaatagagcttctggtgatcttca--------------gcttctgatgaacttgcttttaatgacgtcacc 7962  T
Q  101 agctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    | ||| ||| ||| |||||||||||||| | |  | |||||| |||| |||||| | |||||||||||||||||||||||| |||||||||||||||||    
T  7963 acctcgggagcac-tttgtcttcaggagcaattttcttcagacgctttaagctttc-tttttgttgattcctttgctctctattgttcttccagaacct 8059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 68 - 208
Target Start/End: Original strand, 1944 - 2082
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    ||||||||||| ||||||||||||||||| ||||  ||| || |||||| | ||||||||| ||| || ||||||  ||| ||||||| |||| ||||||    
T  1944 gcttctgatgaccttgcttctgatgacgtcatcacttcatgagcacttt-gacttcaggagcacttctcttcagacactttaagcttcatttt-tgttga 2041  T
Q  168 ttcctttgctctcttttgttcttccagaacctaatgatgat 208  Q
    |||||| ||||||||||||||||||||||| |||| |||||    
T  2042 ttccttcgctctcttttgttcttccagaacataataatgat 2082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 84 - 199
Target Start/End: Original strand, 103812 - 103926
Alignment:
Q  84 cttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttt 183  Q
    ||||||||||||| ||||  | || | ||||||||||||||||||  || || |||||||||||||||||||| | ||||||||||| ||||||||||||    
T  103812 cttctgatgacgtcatcactttagtagcacttttgtcttcaggagcgcttctcttcagatgcttcaagcttcc-tatttgttgattcatttgctctcttt 103910  T
Q  184 tgttcttccagaacct 199  Q
    ||||||| ||||||||    
T  103911 tgttctttcagaacct 103926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 103748 - 103810
Alignment:
Q  3 aagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagat 67  Q
    ||||||||||||||||||||||||||||||| || |||||||||  |||  ||||||||||||||    
T  103748 aagctttaagtcttgcatctcctgatgaacttcagcttctggtgtcctt--gcttctgatgagat 103810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 25599 - 25486
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga-gatgcttctgatgaacttgcttctgatgacgttatcagctcaggatcac 113  Q
    ||||||||||||||||||| || |||||||||||    |||||||||||| | |||||||||||||||||||||||||||||| ||||  |||||| |||    
T  25599 ttgcatctcctgatgaactgcagcttctggtgatacatagcttctgatgaagttgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcac 25500  T
Q  114 ttttgtcttcaggag 128  Q
     ||||||||||||||    
T  25499 -tttgtcttcaggag 25486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 101
Target Start/End: Complemental strand, 36071 - 36024
Alignment:
Q  54 gcttctgatgagatgcttctgatgaacttgcttctgatgacgttatca 101  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||    
T  36071 gcttctgatgaggtgcttctgatgaacttgcttctgatgacgtcatca 36024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 34699 - 34640
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    ||||||||||||||||||||||||||||| ||||  |||||| ||| ||||||||||||||    
T  34699 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcac-tttgtcttcaggag 34640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 35442 - 35569
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgcta---ttcagatgcttcaagcttccttttttgt 164  Q
    ||||||||||||||||||||||||||||| ||||  ||||   |||||| ||||||||||| ||| | |   ||||||||||| | |||||  |||||||    
T  35442 gcttctgatgaacttgcttctgatgacgtcatcacttcagaggcacttt-gtcttcaggagcacttcaaaacttcagatgctttaggcttctctttttgt 35540  T
Q  165 tgattcctttgctctcttttgttcttcca 193  Q
    |||||||||||||||||||||||||||||    
T  35541 tgattcctttgctctcttttgttcttcca 35569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 89941 - 89818
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    ||||||||||||||||||||||||||||| | ||  |||||| |||||| ||||||||||  | |  | |||||| |||| ||||||||||||| |||||    
T  89941 gcttctgatgaacttgcttctgatgacgtcaccacttcaggagcacttt-gtcttcaggaacaattttcttcagacgctttaagcttccttttt-gttga 89844  T
Q  168 ttcctttgctctcttttgttcttcca 193  Q
    |||||||||||||| |||||||||||    
T  89843 ttcctttgctctctattgttcttcca 89818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 89992 - 89931
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||  |||||||||||||||||| || ||||||||||| |||||||||||||||    
T  89992 tgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattttcagcttctgatga 89931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 193
Target Start/End: Complemental strand, 557 - 435
Alignment:
Q  69 cttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgat 168  Q
    |||||||||||||||||||||||||||| | ||  |||||| |||||| ||||||||||| | |  | |||||| |||| ||||||||||||| ||||||    
T  557 cttctgatgaacttgcttctgatgacgtcaccacttcaggagcacttt-gtcttcaggagcagttttcttcagacgctttaagcttccttttt-gttgat 460  T
Q  169 tcctttgctctcttttgttcttcca 193  Q
    ||||||||||| | |||||||||||    
T  459 tcctttgctctttattgttcttcca 435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 208
Target Start/End: Original strand, 14902 - 15040
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    ||||||||||| |||||||||||||||||  |||  ||| || |||||| | ||| ||||| ||| || ||||||  ||| ||||||| |||| ||||||    
T  14902 gcttctgatgaccttgcttctgatgacgtcgtcacttcatgagcacttt-gacttaaggagcacttctcttcagacactttaagcttcatttt-tgttga 14999  T
Q  168 ttcctttgctctcttttgttcttccagaacctaatgatgat 208  Q
    |||||| |||||||||||||||||||||||||||| |||||    
T  15000 ttccttcgctctcttttgttcttccagaacctaataatgat 15040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 3478 - 3570
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgatgac 94  Q
    |||||||||||||  ||||||||||||||||||| | ||||||||||| |||||||||||||  |  ||||||||||||||||||||||||||||    
T  3478 tgaagctttaagt--tgcatctcctgatgaactatagcttctggtgattttcagcttctgataaacttgcttctgatgaacttgcttctgatgac 3570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 3558 - 3618
Alignment:
Q  67 tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    |||||||||||| ||||||||||||||||| ||||  |||||| ||| ||||||||||||||    
T  3558 tgcttctgatgaccttgcttctgatgacgtcatcacttcaggagcac-tttgtcttcaggag 3618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 202
Target Start/End: Original strand, 15328 - 15458
Alignment:
Q  69 cttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttgat 168  Q
    |||||| ||| ||||||||||||||||| ||||  |||| | |||||  | ||||||||| ||| || |||||| |||| |||||||||||| |||||||    
T  15328 cttctggtgatcttgcttctgatgacgtcatcacttcagaagcactt--gacttcaggagcacttctcttcagacgctttaagcttcctttt-tgttgat 15424  T
Q  169 tcctttgctctcttttgttcttccagaacctaat 202  Q
    ||||| ||||||||||||||||  ||||||||||    
T  15425 tccttagctctcttttgttcttaaagaacctaat 15458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 15291 - 15352
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||||||||||||||||| ||| ||| || ||||||||||||||  |||||||||||    
T  15291 tgaagctttaagtcttgcatctccttatgcacttcatcttctggtgatctt--gcttctgatga 15352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 60799 - 60729
Alignment:
Q  8 ttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatga 78  Q
    ||||||||||||||| |||||||||| || ||| |||||||||||||||||| ||||||||||||||||||    
T  60799 ttaagtcttgcatcttctgatgaacttcagcttgtggtgatcttcagcttctaatgagatgcttctgatga 60729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 120 - 202
Target Start/End: Complemental strand, 60704 - 60623
Alignment:
Q  120 cttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaat 202  Q
    ||||||||| ||| || |||||| |||||||||||||| ||||||||||||||| |||  ||||| ||||| |||||||||||    
T  60704 cttcaggagcacttctcttcagacgcttcaagcttcct-ttttgttgattccttagcttcctttttttctttcagaacctaat 60623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 7093 - 6968
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatg-agatgcttctgatgaacttgcttctgatgacgttat 99  Q
    |||||||||||||  ||||||||||||||||||||| |||||||||||   |||||||||||| |  |||||||||| |  |||||||||||||||| ||    
T  7093 tgaagctttaagt--tgcatctcctgatgaactacagcttctggtgattcacagcttctgatgaacttgcttctgataacattgcttctgatgacgtcat 6996  T
Q  100 cagctcaggatcacttttgtcttcaggag 128  Q
    ||  |||||| ||| ||||||||||||||    
T  6995 cacttcaggagcac-tttgtcttcaggag 6968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 5756 - 5692
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaat 202  Q
    |||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  5756 ttcagatgcttcaaacttccttttt-gttgattccttagctctcttttgttcttccagaacctaat 5692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 5876 - 5813
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||||||||||||||||| ||||||| || |||||||||||||| ||||||||||||    
T  5876 tgaagctttaagtcttgcatctcctaatgaacttcagcttctggtgatctttagcttctgatga 5813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 10044 - 9981
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||||||    
T  10044 tgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgattttcagtttctgatga 9981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 197
Target Start/End: Complemental strand, 9956 - 9880
Alignment:
Q  120 cttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaac 197  Q
    ||||||||| ||| || |||| || ||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  9956 cttcaggagcacttctcttcatattcttcaagcttccttttt-gttgattccattgctctcttttgttcttccagaac 9880  T

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Target: scaffold0217 (Bit Score: 47; Significance: 8e-18; HSPs: 5)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 19343 - 19404
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    ||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  19343 ttcagatgctttaagcttcctttt-tgttgattcctttgctctctattgttcttccagaacct 19404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 22056 - 21976
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagat-gcttctgatgaacttgcttctgatgac 94  Q
    |||||||| || ||||||||||||||||||||||   ||||||||||| |  | |||||||||||||||||||||||||||    
T  22056 ttgcatcttctaatgaactacaacttctggtgattcacagcttctgataaacttgcttctgatgaacttgcttctgatgac 21976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 19207 - 19266
Alignment:
Q  3 aagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat 62  Q
    ||||||||||||||| ||| ||||||||| || | |||||||||||||||| ||||||||    
T  19207 aagctttaagtcttgtatcacctgatgaaatagagcttctggtgatcttcaacttctgat 19266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 128
Target Start/End: Complemental strand, 21988 - 21928
Alignment:
Q  67 tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    |||||||||||| ||||||||||||||||| ||||  |||||  ||| ||||||||||||||    
T  21988 tgcttctgatgaccttgcttctgatgacgtcatcacttcaggtgcac-tttgtcttcaggag 21928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 9733 - 9778
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgat 48  Q
    |||||||||||||  |||||||||||||||||| || |||||||||||    
T  9733 tgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 9778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 10143 - 10204
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||  |||||||||||    
T  10143 tgaagctttaagtcttgcatctcctgatgaacttcaacttcttgtgatctt--gcttctgatga 10204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 10228 - 10307
Alignment:
Q  120 cttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    ||||||||| ||| || |||||||||||||||||||| ||||| ||||||| || | ||||||||||||||||||||||||    
T  10228 cttcaggagcacttctcttcagatgcttcaagcttcc-tttttattgattctttagatctcttttgttcttccagaaccta 10307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 23449 - 23350
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    ||||||||||||||||||| ||||||||||||||  |||||| ||| |||||||||||||| | |  | |||||| |||| |||||||| ||||||||||    
T  23449 gcttctgatgaacttgcttttgatgacgttatcacttcaggagcac-tttgtcttcaggagcagttttcttcagacgctttaagcttccctttttgttga 23351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 23500 - 23455
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgat 48  Q
    |||||||||||||  |||||||||||||||||| || |||||||||||    
T  23500 tgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 23455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 6677 - 6586
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat-gagatgcttctgatgaacttgcttctgatga 93  Q
    |||||||||||||  ||||||||||||||||||||| |||||||||||  ||||||||||||  |  ||||||||||||||| |||| ||||||    
T  6677 tgaagctttaagt--tgcatctcctgatgaactacagcttctggtgattctcagcttctgataaacttgcttctgatgaactagcttttgatga 6586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 6511 - 6455
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||| |||| |||||||| |||||||||||||||||||||| | |||||||||||    
T  6511 ttcagacgctttaagcttccctttttgttgattcctttgctctttattgttcttcca 6455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 6596 - 6537
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    |||| ||||||||||||| |||||||||| ||||  |||||| || |||||||||||||||    
T  6596 gcttttgatgaacttgctcctgatgacgtcatcacttcaggagca-ttttgtcttcaggag 6537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9328 - 9387
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat 62  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||  ||||||||||||    
T  9328 tgaagctttaagt--tgcatctcctgatgaactacaacttctggtgattctcagcttctgat 9387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 215422 - 215340
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagat-gcttctgatgaacttgcttctgatgacgt 96  Q
    |||||||||||||| |||| || ||||||||||| ||| ||||||||| |  | |||||||||||||||||||||||||||||    
T  215422 ttgcatctcctgataaactgcagcttctggtgattttcggcttctgataaacttgcttctgatgaacttgcttctgatgacgt 215340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 215283 - 215227
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||| |||| |||||||| |||||||||||||||||||||| | |||||||||||    
T  215283 ttcagacgctttaagcttccctttttgttgattcctttgctctttattgttcttcca 215227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 17661 - 17602
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||| ||||||||||||||    
T  17661 gcttctgatgaacttgcttctgatgacgtcatcacttcaggatcac-tttgtcttcaggag 17602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 40953 - 41016
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaa 201  Q
    |||||||| ||||| ||||||||| |||||||||| |||||||| ||||||||||||||||||||    
T  40953 ttcagatggttcaaacttcctttt-tgttgattccattgctctcatttgttcttccagaacctaa 41016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 43823 - 43742
Alignment:
Q  18 catctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatca 101  Q
    ||||||||||||||  ||  ||||||||||| ||  ||||||||| || |||||||||||||||||||||||||||||| ||||    
T  43823 catctcctgatgaaaaactgcttctggtgatgtt--gcttctgattaggtgcttctgatgaacttgcttctgatgacgtcatca 43742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 43707 - 43652
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||||||||||||||||| || ||| ||||||| |||||||  ||||||||||||    
T  43707 ttcagatgcttcaagcttcc-ttcttgctgattccattgctctaatttgttcttcca 43652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 143399 - 143460
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacct 199  Q
    |||||| |||| |||||||||||||  |||||||||||||||||| |||||||||||||||||    
T  143399 ttcagacgctttaagcttcctttttc-ttgattcctttgctctctattgttcttccagaacct 143460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 143264 - 143325
Alignment:
Q  3 aagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    ||||||| ||||||||||||| ||||||| || | ||||| |||||||||||||||||||||    
T  143264 aagctttgagtcttgcatctcgtgatgaaatagagcttctagtgatcttcagcttctgatga 143325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 3669 - 3617
Alignment:
Q  141 gatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    ||||||| | |||||  ||||||||||||||||||||||||||||||||||||    
T  3669 gatgctttaggcttctctttttgttgattcctttgctctcttttgttcttcca 3617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 7617 - 7673
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    ||||||||||| | |||||  ||||||||||||||||||||||||||| ||||||||    
T  7617 ttcagatgctttaggcttctctttttgttgattcctttgctctctttttttcttcca 7673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 1307 - 1244
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaacctaa 201  Q
    |||||||||||||||||||||| || |||||||   |||||||| ||||||||||||||||||||    
T  1307 ttcagatgcttcaagcttccttctt-gttgattatgttgctctcatttgttcttccagaacctaa 1244  T

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Target: scaffold0422 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 192
Target Start/End: Original strand, 12057 - 12112
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcc 192  Q
    ||||||||||| | |||||  ||||||||||||||||| |||||||||||||||||    
T  12057 ttcagatgctttaggcttctctttttgttgattcctttcctctcttttgttcttcc 12112  T

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Target: scaffold0015 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 60989 - 61036
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgat 62  Q
    ||||||||||||||||||||||||||||||||||  ||| ||||||||    
T  60989 ttgcatctcctgatgaactacaacttctggtgattctcaacttctgat 61036  T

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Target: scaffold0452 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 191
Target Start/End: Complemental strand, 1670 - 1616
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttc 191  Q
    |||||| |||| |||||||| |||||||||||||||||||||| | |||||||||    
T  1670 ttcagacgctttaagcttccctttttgttgattcctttgctctttattgttcttc 1616  T

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Target: scaffold0018 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 193
Target Start/End: Complemental strand, 6280 - 6246
Alignment:
Q  159 ttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||||||||||||||||||||||||||||||||    
T  6280 ttttgttgattcctttgctctcttttgttcttcca 6246  T

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Target: scaffold0297 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 191
Target Start/End: Original strand, 17319 - 17352
Alignment:
Q  158 tttttgttgattcctttgctctcttttgttcttc 191  Q
    ||||||||||||||||||||||||||||||||||    
T  17319 tttttgttgattcctttgctctcttttgttcttc 17352  T

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Target: scaffold0297; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 17135 - 17197
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagat-gcttctgat 76  Q
    |||||| | |||||||||||||| |||||||||| | ||||||||||||| || |||||||||    
T  17135 ttgcattttctgatgaactacaatttctggtgatatacagcttctgatgaaatagcttctgat 17197  T

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Target: scaffold0275 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 71 - 128
Target Start/End: Original strand, 8511 - 8567
Alignment:
Q  71 tctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    |||||||||||||||||||||||||| ||||  |||||| ||| ||||||||||||||    
T  8511 tctgatgaacttgcttctgatgacgtcatcacttcaggagcac-tttgtcttcaggag 8567  T

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Target: scaffold0028 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 5381 - 5332
Alignment:
Q  144 gcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||| |||||||| |||||||||||||||||||||| | |||||||||||    
T  5381 gctttaagcttccctttttgttgattcctttgctctttattgttcttcca 5332  T

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Target: scaffold0655 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 5438 - 5494
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    ||||||||||| | | |||  || |||||||||||||||||||||||||||||||||    
T  5438 ttcagatgctttaggtttctcttcttgttgattcctttgctctcttttgttcttcca 5494  T

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Target: scaffold0473 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 2598 - 2498
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggagaactgctattcagatgcttcaagcttccttttttgttga 167  Q
    ||||||||||||||||||||||||||||| ||||  |||||| |||||  | |||||| || | |  | |||||| |||| || ||||| ||||||||||    
T  2598 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttcagacttcagaagcagttttcttcagacgctttaatcttccctttttgttga 2499  T
Q  168 t 168  Q
    |    
T  2498 t 2498  T

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Target: scaffold0324 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 10130 - 10244
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgttatc 100  Q
    |||||||||||||||   |||| |||||||||| || |||||||||| ||| ||||||| ||  | ||| |||||||||||||  ||||||||||| |||    
T  10130 tgaagctttaagtctcttatcttctgatgaacttcagcttctggtgaactttagcttcttatatggtgc-tctgatgaacttg-atctgatgacgtcatc 10227  T
Q  101 agctcaggatcactttt 117  Q
    |  |||||| |||||||    
T  10228 acttcaggagcactttt 10244  T

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Target: scaffold0280 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 17588 - 17532
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    ||||||||||| | | |||  || |||||||||||||||||||||||||||||||||    
T  17588 ttcagatgctttaggtttctcttcttgttgattcctttgctctcttttgttcttcca 17532  T

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Target: scaffold0185 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 9625 - 9681
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    ||||||||||| | | |||  || |||||||||||||||||||||||||||||||||    
T  9625 ttcagatgctttaggtttctcttcttgttgattcctttgctctcttttgttcttcca 9681  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 74855 - 74934
Alignment:
Q  120 cttcaggagaactgctattcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttccagaaccta 200  Q
    ||||||||| |||  | |||||||||||||| ||| ||| || |||||||||  ||||||| |||||||||||||||||||    
T  74855 cttcaggagcacttttcttcagatgcttcaacctttcttctt-gttgattccactgctctcgtttgttcttccagaaccta 74934  T

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Target: scaffold0011 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 65366 - 65305
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||  |||||||||||||||||| || |||||||||||   |||||||||||||    
T  65366 tgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctgatga 65305  T

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Target: scaffold0011; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 144411 - 144350
Alignment:
Q  1 tgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||||||||  |||||||||||||||||| || |||||||||||   |||||||||||||    
T  144411 tgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctgatga 144350  T

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Target: scaffold0011; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 102
Target Start/End: Complemental strand, 164799 - 164767
Alignment:
Q  70 ttctgatgaacttgcttctgatgacgttatcag 102  Q
    ||||||||||||||||||||||||||| |||||    
T  164799 ttctgatgaacttgcttctgatgacgtcatcag 164767  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 156416 - 156360
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    ||||||||||| | | |||  || |||||||||||||||||||||||||||||||||    
T  156416 ttcagatgctttaggtttctcttcttgttgattcctttgctctcttttgttcttcca 156360  T

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Target: scaffold0002; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 193
Target Start/End: Complemental strand, 481549 - 481519
Alignment:
Q  163 gttgattcctttgctctcttttgttcttcca 193  Q
    |||||||||||||||||||||||||||||||    
T  481549 gttgattcctttgctctcttttgttcttcca 481519  T

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Target: scaffold0570 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 1603 - 1521
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga--gatgcttctgatgaac-ttgcttctgatgac 94  Q
    |||||||| ||||||||||| | |||||||||||   |||||||||||||    |||||||||||||| ||||||||||||||    
T  1603 ttgcatcttctgatgaactatagcttctggtgatacacagcttctgatgaactttgcttctgatgaactttgcttctgatgac 1521  T

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Target: scaffold0211 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 102
Target Start/End: Complemental strand, 15489 - 15454
Alignment:
Q  67 tgcttctgatgaacttgcttctgatgacgttatcag 102  Q
    |||||||||||||||||||||||||||||| |||||    
T  15489 tgcttctgatgaacttgcttctgatgacgtcatcag 15454  T

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Target: scaffold1321 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1321
Description:

Target: scaffold1321; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 714 - 664
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgtt 187  Q
    ||||||||||| | | |||  ||||||||||||||||||||||||||||||    
T  714 ttcagatgctttaggtttctctttttgttgattcctttgctctcttttgtt 664  T

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Target: scaffold1263 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1263
Description:

Target: scaffold1263; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 907 - 857
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgtt 187  Q
    ||||||||||| | | |||  ||||||||||||||||||||||||||||||    
T  907 ttcagatgctttaggtttctctttttgttgattcctttgctctcttttgtt 857  T

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Target: scaffold0132 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 38009 - 37935
Alignment:
Q  15 ttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagat-gcttctgatgaacttgcttct 88  Q
    |||||||||||||||||||| |  |||||||||| | ||||||| ||||| || |||||||||  ||||||||||    
T  38009 ttgcatctcctgatgaactatagtttctggtgatatacagcttccgatgaaatagcttctgatagacttgcttct 37935  T

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Target: scaffold0043 (Bit Score: 31; Significance: 0.00000003; HSPs: 3)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 78250 - 78193
Alignment:
Q  70 ttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    ||||||||||||||||||||||||| | ||||  |||||| ||| ||||||||||||||    
T  78250 ttctgatgaacttgcttctgatgacatcatcacttcaggagcac-tttgtcttcaggag 78193  T

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Target: scaffold0043; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 78167 - 78111
Alignment:
Q  137 ttcagatgcttcaagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||| |||| || ||| | |||||||||||||||||||||| | |||||||||||    
T  78167 ttcagacgctttaatctttcctttttgttgattcctttgctctttattgttcttcca 78111  T

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Target: scaffold0043; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 78290 - 78242
Alignment:
Q  16 tgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 64  Q
    |||||||| |||||||||||| |||||||||||  |||| |||||||||    
T  78290 tgcatctcatgatgaactacagcttctggtgattctcagattctgatga 78242  T

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Target: scaffold0273 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 8132 - 8195
Alignment:
Q  137 ttcagatgcttcaagcttcctttttt---gttgattcctttgctctcttttgttcttccagaac 197  Q
    |||||||||||||||||| ||| ||    ||||||||| |||||||| ||||||||||||||||    
T  8132 ttcagatgcttcaagcttacttcttgtacgttgattccattgctctcatttgttcttccagaac 8195  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 937 - 997
Alignment:
Q  67 tgcttctgatgaacttgcttctgatgacgttatcagctcaggatcacttttgtcttcaggag 128  Q
    ||||| |||||||||||||||||||||||| ||||  |||| | ||| ||||||||||||||    
T  937 tgcttatgatgaacttgcttctgatgacgtcatcacttcagaagcac-tttgtcttcaggag 997  T

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Target: scaffold0010 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 62036 - 62093
Alignment:
Q  137 ttcagatgcttcaagcttcctttt-ttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||||||||| || || || || ||||||||||||| |||||||||||||||||||    
T  62036 ttcagatgcttctaggtttctcttcttgttgattccttagctctcttttgttcttcca 62093  T

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Target: scaffold1331 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 96
Target Start/End: Complemental strand, 497 - 469
Alignment:
Q  68 gcttctgatgaacttgcttctgatgacgt 96  Q
    |||||||||||||||||||||||||||||    
T  497 gcttctgatgaacttgcttctgatgacgt 469  T

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Target: scaffold0488 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0488
Description:

Target: scaffold0488; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 11394 - 11350
Alignment:
Q  149 aagcttccttttttgttgattcctttgctctcttttgttcttcca 193  Q
    |||||||| |||||||||||| ||||||||| | |||||||||||    
T  11394 aagcttccctttttgttgatttctttgctctttattgttcttcca 11350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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