View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0714_low_62 (Length: 253)
Name: NF0714_low_62
Description: NF0714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0714_low_62 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 24 - 253
Target Start/End: Original strand, 11451886 - 11452115
Alignment:
| Q |
24 |
tcatcagctacatcgaatttgaccgcggttatccacaatatcaagagtcgtcaatgtgtctccatcgtgattttaaaaagctataaatcctagtttttgg |
123 |
Q |
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| T |
11451886 |
tcatcagctacatcgaatttgaccgcggttatccacaatatcaagagtcgtcaatgtgtctccaccgtgattttaaaaggctataaatcctagtttttgg |
11451985 |
T |
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| Q |
124 |
tcaatggtacgacaccatcatggaaacaaacaatcactacatctatcggtgtcgtgtaggtgtctgataccaaacagcctttaatcttaagttgtcaaat |
223 |
Q |
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||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
11451986 |
tcaatggtatgaccccgtcatggaaacaaacaatcactacatctatcggtgtcgtgtaggtgtttgataccaaacagcctttaatcttaagttgtcaaat |
11452085 |
T |
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| Q |
224 |
tcaaaacaacaataaaactatacagtaaca |
253 |
Q |
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| T |
11452086 |
tcaaaacaacaataaaactatacagtaaca |
11452115 |
T |
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