View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0714_low_82 (Length: 207)
Name: NF0714_low_82
Description: NF0714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0714_low_82 |
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Alignment Details
Target: chr3 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 33182704 - 33182513
Alignment:
| Q |
1 |
aaaacaacttgggaacagaagtagatccagatatcttatccaattccgtctttctaccagggtatacatctatgttgatttccacaaacctaagtctttt |
100 |
Q |
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| T |
33182704 |
aaaacaacttgggaacagaagtagatccagatatcttatccaactccatctttctactagggtatacatctatgttgatttccacaaacctaagtctttt |
33182605 |
T |
|
| Q |
101 |
tgtacgtaaaaatagcctaaatattctagattcttgacaccctagtttggtgtacaatataatccttcctttcatggctattggtgatgatg |
192 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33182604 |
tgtacgtaaaaatagcctaaatattctagattcttgacaccctagtttggtgtacaatataatccttcctttcatggctattggtgatgatg |
33182513 |
T |
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