View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0715_high_5 (Length: 347)

Name: NF0715_high_5
Description: NF0715
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0715_high_5
NF0715_high_5
[»] scaffold0023 (1 HSPs)
scaffold0023 (8-342)||(135211-135543)
[»] scaffold0348 (1 HSPs)
scaffold0348 (7-297)||(9107-9396)
[»] chr7 (14 HSPs)
chr7 (8-342)||(20906411-20906743)
chr7 (8-342)||(16090846-16091181)
chr7 (8-342)||(29181058-29181393)
chr7 (8-197)||(2966736-2966926)
chr7 (200-342)||(2971219-2971359)
chr7 (9-210)||(21231042-21231242)
chr7 (103-335)||(14230648-14230879)
chr7 (103-342)||(14319579-14319817)
chr7 (85-303)||(2465212-2465427)
chr7 (112-307)||(31155270-31155464)
chr7 (146-271)||(13679403-13679529)
chr7 (101-300)||(3857357-3857554)
chr7 (279-342)||(14567246-14567309)
chr7 (112-211)||(20311132-20311231)
[»] chr3 (14 HSPs)
chr3 (8-342)||(12033395-12033728)
chr3 (8-342)||(17131503-17131837)
chr3 (8-342)||(14865617-14865951)
chr3 (9-297)||(13302235-13302521)
chr3 (9-297)||(13323782-13324069)
chr3 (9-297)||(13312891-13313177)
chr3 (58-303)||(19235057-19235301)
chr3 (9-307)||(51301366-51301659)
chr3 (9-267)||(17240536-17240794)
chr3 (236-342)||(23370455-23370560)
chr3 (232-307)||(10389428-10389502)
chr3 (232-307)||(10414517-10414591)
chr3 (232-307)||(10421187-10421261)
chr3 (110-267)||(18929118-18929277)
[»] chr1 (7 HSPs)
chr1 (8-342)||(21710590-21710923)
chr1 (58-342)||(20851082-20851365)
chr1 (58-342)||(20857709-20857992)
chr1 (58-342)||(21706098-21706381)
chr1 (9-210)||(19663600-19663800)
chr1 (9-267)||(32651345-32651604)
chr1 (7-267)||(18712570-18712831)
[»] scaffold0053 (1 HSPs)
scaffold0053 (8-342)||(79439-79774)
[»] chr8 (6 HSPs)
chr8 (58-342)||(24320620-24320903)
chr8 (9-291)||(29643386-29643668)
chr8 (9-210)||(14056645-14056845)
chr8 (40-267)||(23482076-23482304)
chr8 (146-267)||(18614182-18614304)
chr8 (9-182)||(25111750-25111923)
[»] chr2 (9 HSPs)
chr2 (58-341)||(25180880-25181162)
chr2 (8-332)||(10348-10672)
chr2 (103-342)||(27207669-27207907)
chr2 (112-342)||(26885059-26885287)
chr2 (110-342)||(23168249-23168483)
chr2 (110-342)||(23579506-23579740)
chr2 (144-267)||(23265050-23265174)
chr2 (144-267)||(23280118-23280242)
chr2 (273-307)||(27366533-27366567)
[»] chr4 (4 HSPs)
chr4 (8-330)||(16146791-16147114)
chr4 (110-299)||(27906139-27906328)
chr4 (16-210)||(15407918-15408112)
chr4 (146-260)||(14486569-14486685)
[»] scaffold0072 (1 HSPs)
scaffold0072 (9-342)||(49919-50254)
[»] chr5 (17 HSPs)
chr5 (58-342)||(19236723-19237005)
chr5 (58-342)||(22460978-22461261)
chr5 (58-342)||(22467602-22467885)
chr5 (60-303)||(20772796-20773035)
chr5 (60-303)||(20781571-20781810)
chr5 (59-303)||(24929917-24930160)
chr5 (111-299)||(34829960-34830146)
chr5 (15-267)||(18407967-18408220)
chr5 (9-267)||(23111223-23111482)
chr5 (176-300)||(20820157-20820279)
chr5 (176-300)||(20827257-20827379)
chr5 (112-342)||(28909240-28909467)
chr5 (112-342)||(28945635-28945862)
chr5 (112-342)||(28895992-28896219)
chr5 (112-342)||(28924818-28925045)
chr5 (112-300)||(28889329-28889515)
chr5 (112-211)||(22438828-22438927)
[»] scaffold1318 (1 HSPs)
scaffold1318 (139-342)||(1862-2064)
[»] chr6 (12 HSPs)
chr6 (58-342)||(20007897-20008180)
chr6 (58-303)||(9099060-9099304)
chr6 (9-210)||(9187268-9187467)
chr6 (112-307)||(31252299-31252493)
chr6 (85-342)||(21364433-21364684)
chr6 (85-342)||(23968415-23968666)
chr6 (112-307)||(15458365-15458560)
chr6 (112-307)||(15464960-15465155)
chr6 (238-307)||(11288653-11288721)
chr6 (9-126)||(24513008-24513126)
chr6 (273-307)||(24563474-24563508)
chr6 (279-307)||(28288494-28288522)
[»] scaffold0127 (1 HSPs)
scaffold0127 (15-342)||(10020-10344)
[»] scaffold1469 (1 HSPs)
scaffold1469 (7-307)||(1128-1425)
[»] scaffold0019 (1 HSPs)
scaffold0019 (9-210)||(135245-135446)
[»] scaffold0609 (1 HSPs)
scaffold0609 (112-307)||(5842-6036)
[»] scaffold0124 (1 HSPs)
scaffold0124 (15-210)||(34359-34553)
[»] scaffold0261 (1 HSPs)
scaffold0261 (110-299)||(23562-23751)
[»] scaffold0384 (1 HSPs)
scaffold0384 (87-297)||(16059-16266)
[»] scaffold0001 (1 HSPs)
scaffold0001 (112-342)||(492978-493206)
[»] scaffold0107 (1 HSPs)
scaffold0107 (31-210)||(40614-40793)
[»] scaffold0720 (1 HSPs)
scaffold0720 (103-335)||(3359-3590)
[»] scaffold0131 (1 HSPs)
scaffold0131 (150-342)||(912-1101)
[»] scaffold0461 (1 HSPs)
scaffold0461 (15-267)||(31-284)
[»] scaffold0453 (1 HSPs)
scaffold0453 (110-296)||(10546-10731)
[»] scaffold0034 (1 HSPs)
scaffold0034 (110-299)||(73158-73347)
[»] scaffold0235 (1 HSPs)
scaffold0235 (9-210)||(22675-22875)
[»] scaffold0020 (1 HSPs)
scaffold0020 (9-267)||(101951-102210)
[»] scaffold0029 (2 HSPs)
scaffold0029 (85-303)||(91191-91408)
scaffold0029 (85-303)||(96917-97134)
[»] scaffold0553 (1 HSPs)
scaffold0553 (236-342)||(10145-10250)
[»] scaffold0544 (1 HSPs)
scaffold0544 (236-342)||(1475-1580)
[»] scaffold0249 (1 HSPs)
scaffold0249 (112-307)||(13879-14073)
[»] scaffold0222 (1 HSPs)
scaffold0222 (144-267)||(16728-16852)
[»] scaffold0004 (1 HSPs)
scaffold0004 (88-267)||(116749-116928)
[»] scaffold0146 (1 HSPs)
scaffold0146 (151-267)||(13547-13664)
[»] scaffold0317 (1 HSPs)
scaffold0317 (146-271)||(1296-1422)
[»] scaffold0183 (1 HSPs)
scaffold0183 (238-303)||(6-70)
[»] scaffold1461 (1 HSPs)
scaffold1461 (183-291)||(1485-1592)
[»] scaffold0026 (1 HSPs)
scaffold0026 (236-307)||(111686-111756)
[»] scaffold0099 (1 HSPs)
scaffold0099 (101-226)||(12821-12951)


Alignment Details
Target: scaffold0023 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 8 - 342
Target Start/End: Original strand, 135211 - 135543
Alignment:
Q  8 acatcatcaacaacaattcagcccattcaagaaatcatacaaaacttcccaattcatccatcatattctattcccattccaattctgatcacaatcaaca 107  Q
    |||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||| |||||||    
T  135211 acatcaacaacaacaattcagcccattcaagcattcatacaaaacttcccaattcatccatcatattctattttcattccaattttgatcacgatcaaca 135310  T
Q  108 acatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaat 207  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  135311 acatagattaagaaatcatactaa-catcaaattacaacacaataaacctgattcttacaccttttctttcaaaatcatcattaacccttaattctcaat 135409  T
Q  208 tttacctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaa 307  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||| ||| |||||||||||||||||||||||||    
T  135410 tttacctttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaaga-taatctcacgcttaccttagaattgcaaagacaaa 135508  T
Q  308 tagcacaataaatcagttcctaagttcttttctct 342  Q
    |||||||  ||||||||||||||| |||| |||||    
T  135509 tagcacagcaaatcagttcctaagctcttctctct 135543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 7 - 297
Target Start/End: Original strand, 9107 - 9396
Alignment:
Q  7 gacatcatcaacaacaattcagcccattcaagaaatcatacaaaacttcccaattcatccatcatattctattcccattccaattctgatcacaatcaac 106  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||    
T  9107 gacatcaacaacaacaattcagcccattcaagcaatcatacaaaacttcccaattcatccatcatattctattttcgttccaattctgatcacaatcaac 9206  T
Q  107 aacatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaa 206  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  9207 aacatagattgagaaatcatactaaacatcaaattacaacacaataaacctaattcttacaccttttctttcaaaatcatcattaacccttaattcccaa 9306  T
Q  207 ttttacctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattg 297  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  9307 ttttacttttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaaga-taatcccacccttaccttagaattg 9396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 8 - 342
Target Start/End: Complemental strand, 20906743 - 20906411
Alignment:
Q  8 acatcatcaacaacaattcagcccattcaagaaatcatacaaaacttcccaattcatccatcatattctattcccattccaattctgatcacaatcaaca 107  Q
    |||||| |||||||||||||||||||||||| | || ||||||||||| |||||||||||||||||||||||  |||| |||||  |||||  |||||||    
T  20906743 acatcaacaacaacaattcagcccattcaagcattcttacaaaacttctcaattcatccatcatattctattttcatttcaattacgatcaacatcaaca 20906644  T
Q  108 acatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaat 207  Q
    |||||||||||||||||||||||||||||| | |||||||  |||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  20906643 acatagattaagaaatcatactaaacatcaaagtacaacattataaacttgattcttataccttttctttcaaaatcatcattaacccttaattcccaat 20906544  T
Q  208 tttacctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaa 307  Q
    |||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||    
T  20906543 tttacc-ttaagaatagttcaattgattaattttcagaaattatatattatgactattgaaaga-taatcccacccttaccttagaattgcaaggacaaa 20906446  T
Q  308 tagcacaataaatcagttcctaagttcttttctct 342  Q
    |||| ||  ||||| |||||||||||||| |||||    
T  20906445 tagctcagcaaatccgttcctaagttcttctctct 20906411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 8 - 342
Target Start/End: Original strand, 16090846 - 16091181
Alignment:
Q  8 acatcatcaacaacaattcagcccattcaagaaatcatacaaaacttcccaa-ttcatccatcatattctattcccattccaattctgatcacaatcaac 106  Q
    |||||| ||||| |||||||||||| ||||| | |||| || ||||||| || ||||||||||||||||||||  |||| |||||  |||||  ||||||    
T  16090846 acatcaacaacatcaattcagcccaatcaagcattcattcagaacttccaaaattcatccatcatattctattttcatttcaattacgatcaatatcaac 16090945  T
Q  107 aacatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaaccctta-attccca 205  Q
    ||||| ||||||||||||||||||| |||   | |||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||    
T  16090946 aacatggattaagaaatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttattttccca 16091045  T
Q  206 attttacctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagaca 305  Q
    |||||||| ||| |||||||| |||||||||| |||||||| ||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  16091046 attttacc-ttaggaacagtttaattgattaactttcagaaattacatattatgactattgaaaga-taatcccacccttaccttagaattgcaaagaca 16091143  T
Q  306 aatagcaca-ataaatcagttcctaagttcttttctct 342  Q
    |||||||||   |||||||||||||||||||| |||||    
T  16091144 aatagcacagcaaaatcagttcctaagttcttctctct 16091181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 8 - 342
Target Start/End: Complemental strand, 29181393 - 29181058
Alignment:
Q  8 acatcatcaacaacaattcagcccattcaagaaatcatacaaaacttcccaa-ttcatccatcatattctattcccattccaattctgatcacaatcaac 106  Q
    |||||| ||||| |||||||||||| ||||| | ||||||| ||||||| || ||||||||||||||||||||  |||| |||||  |||||  ||||||    
T  29181393 acatcaacaacatcaattcagcccaatcaagcattcatacagaacttccaaaattcatccatcatattctattttcatttcaattacgatcaatatcaac 29181294  T
Q  107 aacatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaa 206  Q
    ||||| ||||||||||||||||||| |||   | |||||||  |||| |||||||||||||||||| ||||||||||||||||||||||||| || ||||    
T  29181293 aacatggattaagaaatcatactaatcattcaaatacaacattataagcctgattcttacaccttttctttcaaaatcatcattaacccttattttccaa 29181194  T
Q  207 -ttttacctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagaca 305  Q
     ||||||||| ||||| |||| ||||||||||||||||||| ||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  29181193 attttacctt-aagaatagtttaattgattaattttcagaaattacatattatgactattgaaaga-taatcccacccttaccttagaattgcaaagaca 29181096  T
Q  306 aatagcaca-ataaatcagttcctaagttcttttctct 342  Q
    |||||||||   |||||||||||||||||||| |||||    
T  29181095 aatagcacagcaaaatcagttcctaagttcttctctct 29181058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 8 - 197
Target Start/End: Original strand, 2966736 - 2966926
Alignment:
Q  8 acatcatcaacaacaattcagcccattcaagaaatcatacaaaacttcccaa-ttcatccatcatattctattcccattccaattctgatcacaatcaac 106  Q
    |||||| |||||||||||||||||||||||| | ||||||||||||||| || ||||||||||||||||||||  ||||||||||  |||||  ||||||    
T  2966736 acatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcattccaattacgatcaacatcaac 2966835  T
Q  107 aacatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaaccctt 197  Q
    ||||| ||||||||||||||||||| ||||| | |||||||  | |||||||||||||| |||||| ||||||||| ||||||||||||||    
T  2966836 aacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaaacatcattaaccctt 2966926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 200 - 342
Target Start/End: Original strand, 2971219 - 2971359
Alignment:
Q  200 ttcccaattttacctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgca 299  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||| || ||||||||||||||||||||||||    
T  2971219 ttcccaattttacctt-aagaacagttcaattgattaattttcagaaattataaattatgactattgaaagataa-tcccacccttaccttagaattgca 2971316  T
Q  300 aagacaaatagcacaataaatcagttcctaagttcttttctct 342  Q
    |||||||| ||||||  |||||||||||||||||||| |||||    
T  2971317 aagacaaaaagcacagcaaatcagttcctaagttcttctctct 2971359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 9 - 210
Target Start/End: Complemental strand, 21231242 - 21231042
Alignment:
Q  9 catcatcaacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattccaattctgatcacaatcaaca 107  Q
    ||||| ||||||||||||||  ||||| || |||||||||||||||| |||||| ||||| || |||||| |  ||||| |||||||||||||| |||||    
T  21231242 catcaacaacaacaattcagatcattctagcaatcatacaaaacttctccaatttatccaacagattctaatttcattcaaattctgatcacaa-caaca 21231144  T
Q  108 acatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaat 207  Q
      ||||||||||||||||| || |||| || ||||||||||| ||||| ||||||||||||| ||||||||| ||||| ||| ||||| |||||||||||    
T  21231143 ttatagattaagaaatcattctgaacaccaaattacaacacattaaacatgattcttacaccattcctttcagaatcagcatcaaccc-taattcccaat 21231045  T
Q  208 ttt 210  Q
    |||    
T  21231044 ttt 21231042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 103 - 335
Target Start/End: Original strand, 14230648 - 14230879
Alignment:
Q  103 caacaacatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattc 202  Q
    ||||| ||||||||||||||||||||  || |||| ||||||||| | ||||| ||||||||||||||||| |||||||||||   | |  || ||||||    
T  14230648 caacatcatagattaagaaatcatacagaatatcaaattacaacatattaaacatgattcttacacctttc-tttcaaaatcagtctcataccctaattc 14230746  T
Q  203 ccaattttacctttaagaacagttcaatt-gattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaa 301  Q
     |||||||| ||| ||||||  |||  || ||||||||||||||| ||||| ||||     |||||||||  ||||||||||||||||||||||||||||    
T  14230747 tcaattttatcttcaagaactattcttttagattaattttcagaaattatacattaaattcattgaaaga-taatcccacccttaccttagaattgcaaa 14230845  T
Q  302 gacaaatagcacaataaatcagttcctaagttct 335  Q
    |||||| ||||| | ||||| |||||||||||||    
T  14230846 gacaaaaagcacgacaaatccgttcctaagttct 14230879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 103 - 342
Target Start/End: Complemental strand, 14319817 - 14319579
Alignment:
Q  103 caacaacatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattc 202  Q
    ||||| ||||||||||||||| ||||  || |||| ||| ||||| | ||||| ||||||||||||||||| |||||||||||   | |  || ||||||    
T  14319817 caacatcatagattaagaaattatacagaatatcaaattgcaacatattaaacatgattcttacacctttc-tttcaaaatcagtctcataccctaattc 14319719  T
Q  203 ccaattttacctttaagaacagttcaatt-gattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaa 301  Q
     |||||||| ||| ||||||  |||  || ||||||||||||||| ||||| ||||  |  ||||||||| || ||||||||||||||||||||||||||    
T  14319718 tcaattttatcttcaagaactattcttttagattaattttcagaaattatacattaaaatcattgaaagataa-tcccacccttaccttagaattgcaaa 14319620  T
Q  302 gacaaatagcacaataaatcagttcctaagttcttttctct 342  Q
    |||||| ||||||  ||||| |||||||||||||| |||||    
T  14319619 gacaaaaagcacagcaaatccgttcctaagttcttctctct 14319579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 85 - 303
Target Start/End: Original strand, 2465212 - 2465427
Alignment:
Q  85 tccaattctgatcacaatcaacaacatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatc 184  Q
    ||||||| ||||||  |||||||| | ||| || ||||||||| ||| ||||| || | ||||  |||||||| | |||||||| ||| ||| ||||||     
T  2465212 tccaattatgatcaacatcaacaatacagagtaggaaatcatattaatcatcaaat-ataacattataaacctaaatcttacacattttctt-caaaatt 2465309  T
Q  185 atcattaacccttaattcccaattttacctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccaccct 284  Q
      |||||||||| | |||||||||||  |  ||| ||||||| ||||| ||||||||||||| | ||||||||| | ||||||| ||   ||||||||||    
T  2465310 gccattaaccctaatttcccaatttttaccataaaaacagttaaattgcttaattttcagaaatcatatattatcattattgaagga-tgatcccaccct 2465408  T
Q  285 taccttagaattgcaaaga 303  Q
    |||||||||||||||||||    
T  2465409 taccttagaattgcaaaga 2465427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 112 - 307
Target Start/End: Original strand, 31155270 - 31155464
Alignment:
Q  112 agattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaatttta 211  Q
    |||||||||||||||||  ||||||| ||||| |||   ||||| | ||||||||||||||| |||||||||||   | |  || |||||| ||||||||    
T  31155270 agattaagaaatcatacataacatca-attaccacatgttaaacataattcttacacctttc-tttcaaaatcagtctcataccctaattctcaatttta 31155367  T
Q  212 cctttaagaacagttcaatt-gattaatttt-cagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaa 307  Q
       |||| |||  ||||| | |||||||||| ||||| ||||||||||| |  ||||||||| || ||||||||||||||||||||||||||||||||    
T  31155368 ttcttaaaaactattcaactagattaatttttcagaaattatatattataatcattgaaagataa-tcccacccttaccttagaattgcaaagacaaa 31155464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 13679403 - 13679529
Alignment:
Q  146 cacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcag 244  Q
    |||||||||| | ||||||||||| ||||||||||||||| ||| || || |||||| || ||||| | | ||||||| || |||| ||| ||||||||     
T  13679403 cacaataaacataattcttacaccattcctttcaaaatcagcatcaaaccctaattctcagttttatcatcaagaacaatttaattagatcaattttcaa 13679502  T
Q  245 aagttatatattatgactattgaaaga 271  Q
    || |||||||| ||||  |||||||||    
T  13679503 aaattatatatcatgatcattgaaaga 13679529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 300
Target Start/End: Complemental strand, 3857554 - 3857357
Alignment:
Q  101 atcaacaacatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaat 200  Q
    |||||||| | ||| || ||||||||| ||| ||||| || ||||||  |||||||| | |||||||| ||| ||| ||||||   |||||||||| | |    
T  3857554 atcaacaatacagagtaggaaatcatattaatcatcaaat-acaacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaatt 3857457  T
Q  201 tcccaatttt---acctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattg 297  Q
    ||||||||||   ||| | || ||||||| ||||| ||||||||||||| | ||||||||| | |||||||   |  |||||||||||||||||||||||    
T  3857456 tcccaatttttttaccataaa-aacagttaaattgcttaattttcagaaatcatatattatcattattgaagatg--atcccacccttaccttagaattg 3857360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 14567246 - 14567309
Alignment:
Q  279 cacccttaccttagaattgcaaagacaaatagcacaataaatcagttcctaagttcttttctct 342  Q
    ||||||||||||||||||| | ||||||| ||||||  ||||| |||||||||||||| |||||    
T  14567246 cacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttcttctctct 14567309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 20311231 - 20311132
Alignment:
Q  112 agattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctt-tcaaaatcatcattaacccttaattcccaatttt 210  Q
    |||||||| | |||| || ||||||| ||||||||||| ||||||  ||||||||||| ||||||  |||||||  ||| ||||| ||||||||||||||    
T  20311231 agattaaggattcattctgaacatcaaattacaacacattaaacccaattcttacaccattccttcccaaaatcggcatcaaccc-taattcccaatttt 20311133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 205; Significance: 1e-112; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 8 - 342
Target Start/End: Complemental strand, 12033728 - 12033395
Alignment:
Q  8 acatcatcaacaacaattcagcccattcaagaaatcatacaaaacttcccaa-ttcatccatcatattctattcccattccaattctgatcacaatcaac 106  Q
    |||||| |||||||||||||||||||||||| | ||||||||||||||| || ||||||||||||||||||||  || | |||||  |||||  ||||||    
T  12033728 acatcaacaacaacaattcagcccattcaagcattcatacaaaacttccaaaattcatccatcatattctattttcaattcaattacgatcaacatcaac 12033629  T
Q  107 aacatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaatt-ccca 205  Q
    ||||||||||||||||||||||||||||||| | |||||||  |||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||    
T  12033628 aacatagattaagaaatcatactaaacatcaaagtacaacattataaacctgattcttataccttttctttcaaaatcatcattaacccttaatttccca 12033529  T
Q  206 attttacctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagaca 305  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  12033528 attttacctt-aagaacagttcaattgattaattttcagaaattatatattatgactattgaaaga-taatcccacccttaccttagaattgcaaagaca 12033431  T
Q  306 aatagcacaataaatcagttcctaagttcttttctct 342  Q
    || ||||||  |||||||||||||||||||| |||||    
T  12033430 aa-agcacatcaaatcagttcctaagttcttctctct 12033395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 342
Target Start/End: Original strand, 17131503 - 17131837
Alignment:
Q  8 acatcatcaacaacaattcagcccattcaagaaatcatacaaaacttcccaa-ttcatccatcatattctattcccattccaattctgatcacaatcaac 106  Q
    |||||| ||||||||||||||| |||| ||| | |||| |||| ||||| || ||||||||||||||||||||  ||||||||||   ||||  ||||||    
T  17131503 acatcaacaacaacaattcagctcatttaagcattcatgcaaagcttccaaaattcatccatcatattctattttcattccaattacaatcaacatcaac 17131602  T
Q  107 aacatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaa-ttccca 205  Q
    ||||||||||||||||||||||||||||||| | |||||||  ||||||||||| |||| |||||| |||||||||||||| |||||||| || ||||||    
T  17131603 aacatagattaagaaatcatactaaacatcaaagtacaacattataaacctgatccttataccttttctttcaaaatcatccttaaccctaaatttccca 17131702  T
Q  206 attttacctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagaca 305  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  17131703 attttacc-ttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaaga-taatcccacccttaccttagaattgcaaagaca 17131800  T
Q  306 aatagcacaataaatcagttcctaagttcttttctct 342  Q
    || ||||||  |||||||||||||||||||| |||||    
T  17131801 aaaagcacagcaaatcagttcctaagttcttctctct 17131837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 8 - 342
Target Start/End: Original strand, 14865617 - 14865951
Alignment:
Q  8 acatcatcaacaacaattcagcccattcaagaaatcatacaaaacttcccaa-ttcatccatcatattctattcccattccaattctgatcacaatcaac 106  Q
    |||||| |||||||||||||||||| ||||| | ||||||| ||||||| || ||||||||||||||||||||  |||| |||||  |||||  ||||||    
T  14865617 acatcaacaacaacaattcagcccaatcaagcattcatacagaacttccaaaattcatccatcatattctattttcatttcaattacgatcaatatcaac 14865716  T
Q  107 aacatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaaccctta-attccca 205  Q
    ||||| ||||||||||||||||||| ||||  | |||||||  ||||||||| ||||||||||||| ||||||||||||||||||||| |||  ||||||    
T  14865717 aacatggattaagaaatcatactaatcatccaagtacaacattataaacctgcttcttacaccttttctttcaaaatcatcattaaccattattttccca 14865816  T
Q  206 attttacctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagaca 305  Q
    |||||||| |||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  14865817 attttacc-ttaagaacagtttaattgattaattttcagaaattacatattatgactattgaaaga-taatcccacccttaccttagaattgcaaagaca 14865914  T
Q  306 aatagcacaataaatcagttcctaagttcttttctct 342  Q
    |||||||||  |||||||||||||||||||| |||||    
T  14865915 aatagcacagcaaatcagttcctaagttcttctctct 14865951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 9 - 297
Target Start/End: Complemental strand, 13302521 - 13302235
Alignment:
Q  9 catcatcaacaacaattcagcccattcaagaaatcatacaaaacttcccaattcatccatcatattctattcccattccaattctgatcacaatcaacaa 108  Q
    ||||| ||||||||||||||  ||||| || |||||||||||||||||||||||||||| ||||||||| |  |||||||||||||||||||| |||||     
T  13302521 catcaacaacaacaattcagagcattctagcaatcatacaaaacttcccaattcatccaacatattctaatttcattccaattctgatcacaa-caacat 13302423  T
Q  109 catagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaatt 208  Q
     |||  ||||||||  ||||| |||| ||  |||||||||| |||||   ||||||||||| |||||||| || ||||||| |||||| ||||||| |||    
T  13302422 tataagttaagaaaatatactgaacaccaatttacaacacattaaacacaattcttacaccattcctttcgaagtcatcatcaaccctaaattccccatt 13302323  T
Q  209 ttacctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattg 297  Q
    ||| ||| ||||||| | || ||||||||||||||||| ||| ||||||||| ||||||||||  |||| |||||||||||||||||||    
T  13302322 ttatcttcaagaacaatgcatttgattaattttcagaaattacatattatgattattgaaaga-taatctcacccttaccttagaattg 13302235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 9 - 297
Target Start/End: Complemental strand, 13324069 - 13323782
Alignment:
Q  9 catcatcaacaacaattcagcccattcaagaaatcatacaaaacttcccaattcatccatcatattctattcccattccaattctgatcacaatcaacaa 108  Q
    ||||| ||||||||||||||  ||||| || |||||||||||||||||||||||||||| ||||||||| |  |||||||||||||||||||| |||||     
T  13324069 catcaacaacaacaattcagagcattctagcaatcatacaaaacttcccaattcatccaacatattctaatttcattccaattctgatcacaa-caacat 13323971  T
Q  109 catagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaatt 208  Q
     |||  ||||||||  ||||| |||| ||  |||||||||| |||||   ||||||||||| |||||||| || ||||||| |||||| |||||||||||    
T  13323970 tataagttaagaaaatatactgaacaccaatttacaacacattaaacacaattcttacaccattcctttcgaagtcatcatcaaccctaaattcccaatt 13323871  T
Q  209 ttacctttaagaacagt-tcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattg 297  Q
    ||| ||| ||||||| | | | ||||||||||||||||| ||| ||||||||| ||||||||||  |||| |||||||||||||||||||    
T  13323870 ttatcttcaagaacaatctaatttgattaattttcagaaattacatattatgattattgaaaga-taatctcacccttaccttagaattg 13323782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 9 - 297
Target Start/End: Complemental strand, 13313177 - 13312891
Alignment:
Q  9 catcatcaacaacaattcagcccattcaagaaatcatacaaaacttcccaattcatccatcatattctattcccattccaattctgatcacaatcaacaa 108  Q
    ||||| ||||||||||||||  ||||| || |||||||||||||||||||||||||||| ||||||||| |  |||||||||||||||||||| |||||     
T  13313177 catcaacaacaacaattcagagcattctagcaatcatacaaaacttcccaattcatccaacatattctaatttcattccaattctgatcacaa-caacat 13313079  T
Q  109 catagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaatt 208  Q
     |||  ||||||||  ||||| |||| ||  |||||||||| |||||   ||||||||||| |||||||| || ||||||| |||||| ||||||| |||    
T  13313078 tataagttaagaaaatatactgaacaccaatttacaacacattaaacacaattcttacaccattcctttcgaagtcatcatcaaccctaaattccctatt 13312979  T
Q  209 ttacctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattg 297  Q
    ||| ||| ||||||| | || |||||||||||||| || ||| ||||||||| ||||||||||  |||| |||||||||||||||||||    
T  13312978 ttatcttcaagaacaatccatttgattaattttcaaaaattacatattatgattattgaaaga-taatctcacccttaccttagaattg 13312891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 58 - 303
Target Start/End: Complemental strand, 19235301 - 19235057
Alignment:
Q  58 aattcatccatcatattctattcccattccaa-ttctgatcacaatcaacaacatagattaagaaatcatactaaacatcatattacaacacaataaacc 156  Q
    |||||||| |||||||||||||  || ||||| || ||||||  |||||||| |||||||| ||||||||||||| ||||| || ||||||  |||||||    
T  19235301 aattcatctatcatattctattttcactccaaattatgatcaatatcaacaatatagattaggaaatcatactaatcatcaaat-acaacattataaacc 19235203  T
Q  157 tgattcttacacctttcctttcaaaatcatcattaacccttaatt-cccaattttacctttaagaacagttcaattgattaatttt-cagaagttatata 254  Q
    |||||||||||| ||| ||| || |||||||||||||||| |||| |||||||||||||| |||||||||| |||||||||||||| ||||| | |||||    
T  19235202 tgattcttacacattttctt-cagaatcatcattaaccctaaatttcccaattttacctt-aagaacagttaaattgattaatttttcagaaatcatata 19235105  T
Q  255 ttatgactattgaaagagaaatcccacccttaccttagaattgcaaaga 303  Q
    |||| |||||||||||| || ||||||||||||||||||||||||||||    
T  19235104 ttataactattgaaagataa-tcccacccttaccttagaattgcaaaga 19235057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 9 - 307
Target Start/End: Original strand, 51301366 - 51301659
Alignment:
Q  9 catcatcaacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattccaattctgatcacaatcaaca 107  Q
    ||||| ||||||||||||||  ||||| || ||||| |||||||||| |||||| ||||| || |||||| || | |   |||||||||||||| |||||    
T  51301366 catcaacaacaacaattcagatcattctagcaatcaaacaaaacttctccaatt-atccaacaaattctaatctcctcataattctgatcacaa-caaca 51301463  T
Q  108 acatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaat 207  Q
      ||||||||||||||||| |||||||  | | || |||||| |||||||||||||| |||| | ||||||||| | | ||| |||||| ||||||||||    
T  51301464 ttatagattaagaaatcattctaaacactaaacta-aacacattaaacctgattcttgcaccatccctttcaaatt-agcatcaaccct-aattcccaat 51301560  T
Q  208 tttacctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaa 307  Q
    ||||   | | ||||| |||||||||||||||||||||| ||| ||||||||| ||||| ||||  |||| |||||||||||||||||||| ||||||||    
T  51301561 tttattctcatgaacaattcaattgattaattttcagaaattacatattatgattattggaaga-taatctcacccttaccttagaattgcgaagacaaa 51301659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 267
Target Start/End: Complemental strand, 17240794 - 17240536
Alignment:
Q  9 catcatcaacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattccaattctgatcacaatcaaca 107  Q
    ||||| ||||||||||||||  ||||| || ||||||||||| |||| |||||| ||||| || || ||| |  | ||| |||||||||||||  |||||    
T  17240794 catcaacaacaacaattcagatcattctagcaatcatacaaa-cttctccaatttatccaacaaatcctaatttccttcaaattctgatcacag-caaca 17240697  T
Q  108 acatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaa- 206  Q
      ||||||||| |||||||  | ||||  | |||| || ||  ||||| ||||||||||||| ||||||||||||||| ||| ||||| ||||||||||     
T  17240696 ttatagattaataaatcattttgaacactaaattaaaatacgttaaacatgattcttacaccattcctttcaaaatcagcatcaaccc-taattcccaat 17240598  T
Q  207 ttttacctttaagaacagttcaatt-gattaattttcagaagttatatattatgactattga 267  Q
    |||||  || ||||||| ||||||| ||| ||||||||||| |||| ||||| || ||||||    
T  17240597 ttttattttcaagaacaattcaattagatcaattttcagaaattatgtattaagattattga 17240536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 236 - 342
Target Start/End: Complemental strand, 23370560 - 23370455
Alignment:
Q  236 aattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaatagcacaataaatcagttcctaagttct 335  Q
    ||||||||||| ||||| ||||||| |||||| ||| |  |||||||||||||||||||||| | ||||||| ||||||  ||||| |||||||||||||    
T  23370560 aattttcagaaattatagattatgattattgagagatag-tcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttct 23370462  T
Q  336 tttctct 342  Q
    | |||||    
T  23370461 tctctct 23370455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 307
Target Start/End: Complemental strand, 10389502 - 10389428
Alignment:
Q  232 gattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaa 307  Q
    ||||| ||||||||| ||||| ||||| |  ||||||||| || ||||||||||||||||||||||||||||||||    
T  10389502 gattacttttcagaaattatacattataatcattgaaagataa-tcccacccttaccttagaattgcaaagacaaa 10389428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 307
Target Start/End: Complemental strand, 10414591 - 10414517
Alignment:
Q  232 gattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaa 307  Q
    ||||| ||||||||| ||||| ||||| |  ||||||||| || ||||||||||||||||||||||||||||||||    
T  10414591 gattacttttcagaaattatacattataatcattgaaagataa-tcccacccttaccttagaattgcaaagacaaa 10414517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 307
Target Start/End: Complemental strand, 10421261 - 10421187
Alignment:
Q  232 gattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaa 307  Q
    ||||| ||||||||| ||||| ||||| |  ||||||||| || ||||||||||||||||||||||||||||||||    
T  10421261 gattacttttcagaaattatacattataatcattgaaagataa-tcccacccttaccttagaattgcaaagacaaa 10421187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 267
Target Start/End: Original strand, 18929118 - 18929277
Alignment:
Q  110 atagattaagaaatcatactaaacatcatattac--aacacaataaacctgattcttacacctttcctttc-aaaatcatcattaacccttaattcccaa 206  Q
    ||||||||||||||||| |||||||| | |  ||  |||||| ||||| ||||||||||||| |||||||| ||||||| ||| ||||| |||| |||||    
T  18929118 atagattaagaaatcattctaaacatgaaaa-actaaacacattaaacatgattcttacaccattcctttcaaaaatcagcatgaaccc-taatccccaa 18929215  T
Q  207 ttttacctttaagaacagttcaatt-gattaattttcagaagttatatattatgactattga 267  Q
    ||||| ||  ||||||| |  | || ||| ||||||||||| |||||||| |||| ||||||    
T  18929216 ttttatctcgaagaacaatatacttagatcaattttcagaaattatatatcatgattattga 18929277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 342
Target Start/End: Original strand, 21710590 - 21710923
Alignment:
Q  8 acatcatcaacaacaattcagcccattcaagaaatcatacaaaacttcccaa-ttcatccatcatattctattcccattccaattctgatcacaatcaac 106  Q
    |||||| |||||||||||||||||||||||| | ||||||||| ||||| || ||||||||||||||||||||  |||||||||| ||||||  ||||||    
T  21710590 acatcaacaacaacaattcagcccattcaagcattcatacaaagcttccaaaattcatccatcatattctattttcattccaattatgatcaacatcaac 21710689  T
Q  107 aacatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaa-ttccca 205  Q
    ||||||||||||| ||||||||||||||||| | || ||||  ||||||||||| |||| || ||| |||||||||||||| | |||||| || ||||||    
T  21710690 aacatagattaaggaatcatactaaacatca-agtataacattataaacctgatccttatactttttctttcaaaatcatcttaaaccctaaatttccca 21710788  T
Q  206 attttacctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagaca 305  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  21710789 attttacc-ttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaaga-taatcccacccttaccttagaattgcaaagaca 21710886  T
Q  306 aatagcacaataaatcagttcctaagttcttttctct 342  Q
    || ||||||  |||||||||||||||||||| |||||    
T  21710887 aaaagcacagcaaatcagttcctaagttcttctctct 21710923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 58 - 342
Target Start/End: Complemental strand, 20851365 - 20851082
Alignment:
Q  58 aattcatccatcatattctattcccattccaattctgatcacaatcaacaacatagattaagaaatcatactaaacatcatattacaacacaataaacct 157  Q
    ||||||| ||||||||||||||  ||||||||||  |||||  ||||||||||||||||||||||||||||||||||||| | |||||||  ||||||||    
T  20851365 aattcattcatcatattctattttcattccaattacgatcagcatcaacaacatagattaagaaatcatactaaacatcaaagtacaacaatataaacct 20851266  T
Q  158 gattcttacacctttcctttcaaaatcatcattaacccttaatt-cccaattttacctttaagaacagttcaattgattaattttcagaagttatatatt 256  Q
    ||| |||| |||||| |||||||||||||| |||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  20851265 gatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttacctt-aagaacagttcaattgattaattttcagaaattatatatt 20851167  T
Q  257 atgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaatagcacaataaatcagttcctaagttcttttctct 342  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||| |||||    
T  20851166 atgactattgaaaga-taatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttcttctctct 20851082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 58 - 342
Target Start/End: Complemental strand, 20857992 - 20857709
Alignment:
Q  58 aattcatccatcatattctattcccattccaattctgatcacaatcaacaacatagattaagaaatcatactaaacatcatattacaacacaataaacct 157  Q
    ||||||| ||||||||||||||  ||||||||||  |||||  |||||||||||||||||||||| |||||||||||||| | |||||||  ||||||||    
T  20857992 aattcattcatcatattctattttcattccaattacgatcagcatcaacaacatagattaagaaaacatactaaacatcaaagtacaacaatataaacct 20857893  T
Q  158 gattcttacacctttcctttcaaaatcatcattaacccttaatt-cccaattttacctttaagaacagttcaattgattaattttcagaagttatatatt 256  Q
    ||| |||| |||||| |||||||||||||| |||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  20857892 gatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttacctt-aagaacagttcaattgattaattttcagaaattatatatt 20857794  T
Q  257 atgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaatagcacaataaatcagttcctaagttcttttctct 342  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||| |||||    
T  20857793 atgactattgaaaga-taatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttcttctctct 20857709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 58 - 342
Target Start/End: Original strand, 21706098 - 21706381
Alignment:
Q  58 aattcatccatcatattctattcccattccaattctgatcacaatcaacaacatagattaagaaatcatactaaacatcatattacaacacaataaacct 157  Q
    ||||||| ||||||||||||||  ||||||||||  |||||  |||||||||||||||||||||| |||||||||||||| | |||||||  ||||||||    
T  21706098 aattcattcatcatattctattttcattccaattacgatcagcatcaacaacatagattaagaaaacatactaaacatcaaagtacaacaatataaacct 21706197  T
Q  158 gattcttacacctttcctttcaaaatcatcattaacccttaa-ttcccaattttacctttaagaacagttcaattgattaattttcagaagttatatatt 256  Q
    ||| |||| |||||| |||||||||||||| |||||||| || |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  21706198 gatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttacc-ttaagaacagttcaattgattaattttcagaaattatatatt 21706296  T
Q  257 atgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaatagcacaataaatcagttcctaagttcttttctct 342  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||| |||||    
T  21706297 atgactattgaaaga-taatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttcttctctct 21706381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 9 - 210
Target Start/End: Complemental strand, 19663800 - 19663600
Alignment:
Q  9 catcatcaacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattccaattctgatcacaatcaaca 107  Q
    |||| |||||||||||||||  ||||| |  ||||| |||||||||| |||||| ||||| || |||||| |  |||||||||||||||||||  |||||    
T  19663800 catcttcaacaacaattcagatcattctaacaatcacacaaaacttctccaatttatccaacagattctaatttcattccaattctgatcacag-caaca 19663702  T
Q  108 acatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaat 207  Q
      ||||||||||||||||| || ||||||| ||||||||||| ||||| | ||||||||||| ||||||||||||||| ||| ||||| |||||||||||    
T  19663701 ttatagattaagaaatcattctgaacatcaaattacaacacattaaacataattcttacaccattcctttcaaaatcagcatcaaccc-taattcccaat 19663603  T
Q  208 ttt 210  Q
    |||    
T  19663602 ttt 19663600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 267
Target Start/End: Original strand, 32651345 - 32651604
Alignment:
Q  9 catcatcaacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattc-caattctgatcacaatcaac 106  Q
    ||||| ||||||||||||||  ||||| || |||||||||||||||| |||||| ||||| || |||||| || |||||  |||||||||||| | ||||    
T  32651345 catcaacaacaacaattcagatcattctagcaatcatacaaaacttctccaatttatccaacaaattctaatctcattcaaaattctgatcac-agcaac 32651443  T
Q  107 aacatagattaagaaatcatactaaaca-tcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattccca 205  Q
    |  ||||||||||||||||| ||||||| | | | || |||||| ||||| ||||||||||||| | |||||| |||||| ||| ||||| |||||||||    
T  32651444 attatagattaagaaatcattctaaacactaaaacta-aacacattaaacatgattcttacaccatccctttc-aaatcagcatcaaccc-taattccca 32651540  T
Q  206 a-ttttacctttaagaacagttcaatt-gattaattttcagaagttatatattatgactattga 267  Q
    | |||||  || |||||||  |||||| ||| ||||||||||| ||||||| ||||| ||||||    
T  32651541 atttttattttcaagaacaactcaattagatcaattttcagaaattatatactatgattattga 32651604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 267
Target Start/End: Original strand, 18712570 - 18712831
Alignment:
Q  7 gacatcatcaacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattccaattctgatcacaatcaa 105  Q
    ||||||| |||||||||||| |  ||||| || ||||||||||||| || ||||||   ||| |  |||||| || |  || |||||||||||||  |||    
T  18712570 gacatcaacaacaacaattctgatcattctagcaatcatacaaaacctctccaattttcccaaccaattctaatctccctcaaattctgatcacag-caa 18712668  T
Q  106 caacatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattccca 205  Q
    ||  ||||||||||||||||| || ||||  | |    |||||| ||||| ||||||||||||| ||||||||||||||| ||| ||||| ||||||  |    
T  18712669 cattatagattaagaaatcattctgaacacgaaaactaaacacattaaacatgattcttacaccattcctttcaaaatcagcatcaaccc-taattctaa 18712767  T
Q  206 a-ttttacctttaagaacagttcaatt-gattaattttcagaagttatatattatgactattga 267  Q
    | |||||  || ||||||| ||||||| ||| ||||||||||| ||||||| ||||| ||||||    
T  18712768 atttttaatttcaagaacaattcaattagatcaattttcagaaattatatactatgattattga 18712831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 8 - 342
Target Start/End: Complemental strand, 79774 - 79439
Alignment:
Q  8 acatcatcaacaacaattcagcccattcaagaaatcatacaaaacttcccaa-ttcatccatcatattctattcccattccaattctgatcacaatcaac 106  Q
    |||||| ||||| |||||||||||| ||||| | ||||||| ||||||| || ||||||||||||||||||||  |||| |||||  |||||  ||||||    
T  79774 acatcaacaacatcaattcagcccaatcaagcattcatacagaacttccaaaattcatccatcatattctattttcatttcaattacgatcaatatcaac 79675  T
Q  107 aacatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaaccctta-attccca 205  Q
    ||||| ||||||||||||||||||| |||   | |||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||    
T  79674 aacatggattaagaaatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttattttccca 79575  T
Q  206 attttacctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagaca 305  Q
    |||||||| |||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  79574 attttacc-ttaagaacagtttaattgattaattttcagaaattacatattatgactattgaaaga-taatcccacccttaccttagaattgcaaagaca 79477  T
Q  306 aatagcaca-ataaatcagttcctaagttcttttctct 342  Q
    |||||||||   |||||||||||||||||||| |||||    
T  79476 aatagcacagcaaaatcagttcctaagttcttctctct 79439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 170; Significance: 3e-91; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 58 - 342
Target Start/End: Complemental strand, 24320903 - 24320620
Alignment:
Q  58 aattcatccatcatattctattcccattccaattctgatcacaatcaacaacatagattaagaaatcatactaaacatcatattacaacacaataaacct 157  Q
    ||||||| ||||||||||||||  ||||||||||  |||||  ||||||||||||||||||||||||||||||||||||| | |||||||  ||||||||    
T  24320903 aattcattcatcatattctattttcattccaattacgatcagcatcaacaacatagattaagaaatcatactaaacatcaaagtacaacaatataaacct 24320804  T
Q  158 gattcttacacctttcctttcaaaatcatcattaacccttaatt-cccaattttacctttaagaacagttcaattgattaattttcagaagttatatatt 256  Q
    ||| | || |||||| |||||||||||||| |||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  24320803 gatccctataccttttctttcaaaatcatccttaaccctaaatttcccaattttacctt-aagaacagttcaattgattaattttcagaaattatatatt 24320705  T
Q  257 atgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaatagcacaataaatcagttcctaagttcttttctct 342  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||| |||||    
T  24320704 atgactattgaaaga-taatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttcttctctct 24320620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 9 - 291
Target Start/End: Complemental strand, 29643668 - 29643386
Alignment:
Q  9 catcatcaacaacaattcagcccattcaagaaatcatacaaaacttcccaattcatccatcatattctattcccattccaattctgatcacaatcaacaa 108  Q
    ||||||||||||||||||||  ||||| || |||||||||||||||| ||||||||||| |||||||||||  ||||||||||||||||||||||||||     
T  29643668 catcatcaacaacaattcagagcattctagcaatcatacaaaacttcacaattcatccaacatattctattttcattccaattctgatcacaatcaacat 29643569  T
Q  109 catagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaatt 208  Q
     |||||||||||||||||||| |||| || ||||||||||||| ||||  |||||||||||  ||||| | |||||||||| |||||||||||| |||||    
T  29643568 tatagattaagaaatcatactgaacaccaaattacaacacaattaacccaattcttacaccaatccttcctaaatcatcatcaacccttaattctcaatt 29643469  T
Q  209 ttacctttaagaacagttcaa-ttgattaattttcagaagttatatattatgactattgaaagagaaatcccacccttacctta 291  Q
    ||| ||| | ||||| ||||| ||||||||||||||||| ||| ||||||||| ||||||||||  |||| |||||||||||||    
T  29643468 ttatcttcatgaacaattcaatttgattaattttcagaaattacatattatgattattgaaaga-taatctcacccttacctta 29643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 210
Target Start/End: Complemental strand, 14056845 - 14056645
Alignment:
Q  9 catcatcaacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattccaattctgatcacaatcaaca 107  Q
    ||||| ||||||||||||||  ||||| |  |||||||||||||||| |||||| ||||| |  |||||| | |||||| |||||||||||||| |||||    
T  14056845 catcaacaacaacaattcagatcattctaacaatcatacaaaacttctccaatttatccaaccgattctaattccattcaaattctgatcacaa-caaca 14056747  T
Q  108 acatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaat 207  Q
      ||||||||||||||||| || ||||||  ||||||||||| ||||| ||   |||||||| | ||||||||||||| ||| |||||| | ||||||||    
T  14056746 ttatagattaagaaatcattctgaacatcgaattacaacacattaaacatg-gccttacaccatacctttcaaaatcagcatcaaccctaatttcccaat 14056648  T
Q  208 ttt 210  Q
    |||    
T  14056647 ttt 14056645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 40 - 267
Target Start/End: Complemental strand, 23482304 - 23482076
Alignment:
Q  40 aatcatacaaaacttc-ccaattcatccatcatattctattcccattcc-aattctgatcacaatcaacaacatagattaagaaatcatactaaacatca 137  Q
    |||||||||||||||| |||||| ||||  || |||||| || | |||  |||||||||| ||| |||||| ||||||||||||||||| ||||||   |    
T  23482304 aatcatacaaaacttctccaatttatcccacaaattctaatctccttcataattctgatcccaa-caacaatatagattaagaaatcattctaaacccta 23482206  T
Q  138 tattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaa-ttttacctttaagaacagttcaatt-gatt 235  Q
     | || |||||| ||||| ||||||||||||| | ||||||||||||| ||| ||||| |||||||||| |||||  || ||||||| ||||||| |||     
T  23482205 aacta-aacacattaaacatgattcttacaccatccctttcaaaatcagcatcaaccc-taattcccaatttttattttcaagaacaattcaattagatc 23482108  T
Q  236 aattttcagaagttatatattatgactattga 267  Q
    ||||||||||| ||||||| ||||| ||||||    
T  23482107 aattttcagaaattatatactatgattattga 23482076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 146 - 267
Target Start/End: Original strand, 18614182 - 18614304
Alignment:
Q  146 cacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcag 244  Q
    |||||||||| | ||||||||||| |||||||| |||||| ||| || || |||||| |||||||| ||| ||||||| ||||||| ||| |||||||||    
T  18614182 cacaataaacataattcttacaccattcctttctaaatcagcataaaaccctaattctcaattttatcttcaagaacaattcaattggatcaattttcag 18614281  T
Q  245 aagttatatattatgactattga 267  Q
    || |||||||| |||| ||||||    
T  18614282 aaattatatatcatgattattga 18614304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 182
Target Start/End: Original strand, 25111750 - 25111923
Alignment:
Q  9 catcatcaacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattccaattctgatcacaatcaaca 107  Q
    ||||| ||||||||||||||  ||||| |  |||||||||||||||| |||||| ||||| |  |||||| |  ||||| ||||||||||||| ||| ||    
T  25111750 catcaacaacaacaattcagatcattccaacaatcatacaaaacttctccaatttatccaaccgattctaatttcattcaaattctgatcaca-tcagca 25111848  T
Q  108 acatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaa 182  Q
      |||||||| ||| |||| || ||||||| | ||||||||| |||||  ||| || ||||| ||||||||||||    
T  25111849 ttatagattaggaattcattctgaacatcaaaatacaacacattaaacacgatcctcacaccattcctttcaaaa 25111923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 165; Significance: 3e-88; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 58 - 341
Target Start/End: Complemental strand, 25181162 - 25180880
Alignment:
Q  58 aattcatccatcatattctattcccattccaattctgatcacaatcaacaacatagattaagaaatcatactaaacatcatattacaacacaataaacct 157  Q
    ||||||||||||||||||||||  ||||||||||  |||||  ||||||||||||||||||||||||||||||||||||| | ||||| |  ||||||||    
T  25181162 aattcatccatcatattctattttcattccaattacgatcaacatcaacaacatagattaagaaatcatactaaacatcaaagtacaaaaatataaacct 25181063  T
Q  158 gattcttacacctttcctttcaaaatcatcattaacccttaatt-cccaattttacctttaagaacagttcaattgattaattttcagaagttatatatt 256  Q
    |||   || |||||| |||||||||||||| |||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  25181062 gatcaatataccttttctttcaaaatcatccttaaccctaaatttcccaattttacctt-aagaacagttcaattgattaattttcagaaattatatatt 25180964  T
Q  257 atgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaatagcacaataaatcagttcctaagttcttttctc 341  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||| ||||    
T  25180963 atgactattgaaaga-taatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttcttctctc 25180880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 8 - 332
Target Start/End: Original strand, 10348 - 10672
Alignment:
Q  8 acatcatcaacaacaattcagcccattcaagaaatcatacaaaacttcccaa-ttcatccatcatattctattcccattccaattctgatcacaatcaac 106  Q
    |||||| ||||| |||||| |  |||||||| | |||| |||| ||||| || ||||||||||||||||||||  ||||||||||  |||||  ||||||    
T  10348 acatcaacaacatcaattcggttcattcaagcattcatgcaaagcttccaaaattcatccatcatattctattttcattccaattacgatcagcatcaac 10447  T
Q  107 aacatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaa-ttccca 205  Q
    ||||||||||||||||||||||||||||||| | |||||||  |||||||| || | || |||||| |||||||||||||| |||||||| || ||||||    
T  10448 aacatagattaagaaatcatactaaacatcaaagtacaacaatataaaccttatccctataccttttctttcaaaatcatccttaaccctaaatttccca 10547  T
Q  206 attttacctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagaca 305  Q
    |||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||    
T  10548 attttacc-ttaagaacaattcaattgattaattttcagaaattatatattatgactattgaaaga-taatcccacccttaccttagaatttcaaagaca 10645  T
Q  306 aatagcacaataaatcagttcctaagt 332  Q
    || ||||||  ||||||||||||||||    
T  10646 aaaagcacagcaaatcagttcctaagt 10672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 103 - 342
Target Start/End: Complemental strand, 27207907 - 27207669
Alignment:
Q  103 caacaacatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattc 202  Q
    ||||| ||||||||||||||| ||||  || |||| ||| ||||| | ||||| ||||||||||||||||| |||||||||||   | |  || ||||||    
T  27207907 caacatcatagattaagaaattatacagaatatcaaattgcaacatattaaacatgattcttacacctttc-tttcaaaatcagtctcataccctaattc 27207809  T
Q  203 ccaattttacctttaagaacagttcaatt-gattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaa 301  Q
     |||||||| ||| ||||||  |||  || ||||||||||||||| ||||| ||||  |  ||||||||| || ||||||||||||||||||||||||||    
T  27207808 tcaattttatcttcaagaactattcttttagattaattttcagaaattatacattaaaatcattgaaagataa-tcccacccttaccttagaattgcaaa 27207710  T
Q  302 gacaaatagcacaataaatcagttcctaagttcttttctct 342  Q
    |||||| ||||||  ||||| |||||||||||||| |||||    
T  27207709 gacaaaaagcacagcaaatccgttcctaagttcttctctct 27207669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 112 - 342
Target Start/End: Original strand, 26885059 - 26885287
Alignment:
Q  112 agattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaatttta 211  Q
    ||||||||||||||||| |||||||| | |||   ||| | ||| |||||||||||||||| |||||||||| | |||||  || |||||| |||||||     
T  26885059 agattaagaaatcatacaaaacatcaaactactttaca-tcaacatgattcttacaccttttctttcaaaattagcattataccctaattctcaattttt 26885157  T
Q  212 cctttaagaacagttcaatt-gattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaatag 310  Q
     ||  ||||||  ||| ||| ||||||||||||||| ||||| |||| || |||||||||| || |||||||||||||||||||||||| ||||||| ||    
T  26885158 tctccaagaactattccattagattaattttcagaaattatacatta-gattattgaaagataa-tcccacccttaccttagaattgcagagacaaaaag 26885255  T
Q  311 cacaataaatcagttcctaagttcttttctct 342  Q
    ||||  ||||| |||||||||||||| |||||    
T  26885256 cacatcaaatccgttcctaagttcttctctct 26885287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 110 - 342
Target Start/End: Complemental strand, 23168483 - 23168249
Alignment:
Q  110 atagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaa--- 206  Q
    |||||||||||||||||||| ||||||| ||||||||||| ||||| ||| |||||||||||| |||||||||||| ||| |  || |||||| |||       
T  23168483 atagattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctcaattt 23168384  T
Q  207 ttttacctttaagaacagttcaatt-gattaa-ttttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagac 304  Q
    ||||| ||| || |||  ||| ||| |||||| ||||||||| ||||| |||||||  | |||||||  |||||||||||||||||||||||||| | ||    
T  23168383 ttttatcttcaa-aactattctattagattaatttttcagaaattatacattatgatcaatgaaaga-taatcccacccttaccttagaattgcagaaac 23168286  T
Q  305 aaatagcacaataaatcagttcctaagttcttttctct 342  Q
    ||| ||||||  ||| | || ||||||||||| |||||    
T  23168285 aaa-agcacagcaaaaccgtccctaagttcttctctct 23168249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 110 - 342
Target Start/End: Complemental strand, 23579740 - 23579506
Alignment:
Q  110 atagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaa--- 206  Q
    |||||||||||||||||||| ||||||| ||||||||||| ||||| ||| |||||||||||| |||||||||||| ||| |  || |||||| |||       
T  23579740 atagattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctcaattt 23579641  T
Q  207 ttttacctttaagaacagttcaatt-gattaa-ttttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagac 304  Q
    ||||| ||| || |||  ||| ||| |||||| ||||||||| ||||| |||||||  | |||||||  |||||||||||||||||||||||||| | ||    
T  23579640 ttttatcttcaa-aactattctattagattaatttttcagaaattatacattatgatcaatgaaaga-taatcccacccttaccttagaattgcagaaac 23579543  T
Q  305 aaatagcacaataaatcagttcctaagttcttttctct 342  Q
    ||| ||||||  ||| | || ||||||||||| |||||    
T  23579542 aaa-agcacagcaaaaccgtccctaagttcttctctct 23579506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 267
Target Start/End: Original strand, 23265050 - 23265174
Alignment:
Q  144 aacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaa-ttttacctttaagaacagttcaatt-gattaatttt 241  Q
    |||||| ||||| ||||||||||||| ||||||||||||||| ||| ||||| |||||| ||| |||||  || ||||||| ||||||| ||| ||||||    
T  23265050 aacacattaaacatgattcttacaccattcctttcaaaatcagcatcaaccc-taattctcaatttttattttcaagaacaattcaattagatcaatttt 23265148  T
Q  242 cagaagttatatattatgactattga 267  Q
    ||||| ||||||| ||||| ||||||    
T  23265149 cagaaattatatactatgattattga 23265174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 267
Target Start/End: Original strand, 23280118 - 23280242
Alignment:
Q  144 aacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaa-ttttacctttaagaacagttcaatt-gattaatttt 241  Q
    |||||| ||||| ||||||||||||| ||||||||||||||| ||| ||||| |||||| ||| |||||  || ||||||| ||||||| ||| ||||||    
T  23280118 aacacattaaacatgattcttacaccattcctttcaaaatcagcatcaaccc-taattctcaatttttattttcaagaacaattcaattagatcaatttt 23280216  T
Q  242 cagaagttatatattatgactattga 267  Q
    ||||| ||||||| ||||| ||||||    
T  23280217 cagaaattatatactatgattattga 23280242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 307
Target Start/End: Complemental strand, 27366567 - 27366533
Alignment:
Q  273 aaatcccacccttaccttagaattgcaaagacaaa 307  Q
    ||||| |||||||||||||||||||||||||||||    
T  27366567 aaatctcacccttaccttagaattgcaaagacaaa 27366533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 162; Significance: 2e-86; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 8 - 330
Target Start/End: Complemental strand, 16147114 - 16146791
Alignment:
Q  8 acatcatcaacaacaattcagcccattcaagaaatcatacaaaacttcccaa-ttcatccatcatattctattcccattccaattctgatcacaatcaac 106  Q
    |||||| ||||| |||||||||||| ||||| | ||||||| ||||||| || ||||||||||||||||||||  |||| |||||  |||||  ||||||    
T  16147114 acatcaacaacatcaattcagcccaatcaagcattcatacagaacttccaaaattcatccatcatattctattttcatttcaattacgatcaatatcaac 16147015  T
Q  107 aacatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaa 206  Q
    ||||| ||||||||||||||||||| |||   | |||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||    
T  16147014 aacatggattaagaaatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttattttccaa 16146915  T
Q  207 -ttttacctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagaca 305  Q
     ||||||||| |||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  16146914 attttacctt-aagaacagtttaattgattaattttcagaaattacatattatgactattgaaaga-taatcccacccttaccttagaattgcaaagaca 16146817  T
Q  306 aatagcaca-ataaatcagttcctaa 330  Q
    |||||||||   ||||||||||||||    
T  16146816 aatagcacagcaaaatcagttcctaa 16146791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 27906139 - 27906328
Alignment:
Q  110 atagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaattt 209  Q
    |||||||||||||||||||  ||||||| ||||||||||| ||||| |||||||||||||||| |||||||||||| ||| |  || |||||| ||||||    
T  27906139 atagattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccttttctttcaaaatcaacatcacaccctaattctcaattt 27906238  T
Q  210 tacctttaagaacagttcaatt-gattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgca 299  Q
    || ||| ||||||  ||| |||  |||||||||||||| ||||| |||||||  |||||||||  ||||||||||||| ||||||||||||    
T  27906239 tatcttcaagaactattctattatattaattttcagaaattatacattatgatcattgaaaga-taatcccacccttatcttagaattgca 27906328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 16 - 210
Target Start/End: Original strand, 15407918 - 15408112
Alignment:
Q  16 aacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattccaattctgatcacaatcaacaacataga 114  Q
    |||||||||||||  ||||| |  |||||||||||||||| |||||| ||||| |  |||||| |  ||||| |||||||||||||  |||||  |||||    
T  15407918 aacaacaattcagatcattctaacaatcatacaaaacttctccaatttatccaaccgattctaatttcattcaaattctgatcacag-caacattataga 15408016  T
Q  115 ttaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaatttt 210  Q
    |||||||||||| || ||||||| ||||||||||| ||||| |||| |||| ||| |||||| |||||||| ||| |||||| | |||||||||||    
T  15408017 ttaagaaatcattctgaacatcaaattacaacacattaaacatgatccttaaaccattccttccaaaatcagcatcaaccctaatttcccaatttt 15408112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 146 - 260
Target Start/End: Original strand, 14486569 - 14486685
Alignment:
Q  146 cacaataaacctga-ttcttacacctttcctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttca 243  Q
    |||||||||| ||| |||| ||||| ||||| ||||||||||||| ||||||  ||||||||||||| ||| ||||||| ||||||| ||||||||||||    
T  14486569 cacaataaacatgaattctcacaccattcctatcaaaatcatcatcaaccctatattcccaattttatcttcaagaacaattcaattcgattaattttca 14486668  T
Q  244 gaagttatatattatga 260  Q
    ||| |||||||||||||    
T  14486669 gaaattatatattatga 14486685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 161; Significance: 8e-86; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 9 - 342
Target Start/End: Complemental strand, 50254 - 49919
Alignment:
Q  9 catcatcaacaacaattcagcccattcaagaaatcatacaaaacttcccaa-ttcatccatcatattctattcccattccaattctgatcacaatcaaca 107  Q
    ||||| ||||| |||||||||||| ||||| | ||||||| ||||||| || ||||||||||||||||||||  |||| |||||  |||||  |||||||    
T  50254 catcaacaacatcaattcagcccaatcaagcattcatacagaacttccaaaattcatccatcatattctattttcatttcaattacgatcaatatcaaca 50155  T
Q  108 acatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaaccctta-attcccaa 206  Q
    |||| ||||||||||||||||||| | |   | || ||||  ||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||    
T  50154 acatggattaagaaatcatactaatctttcaaatataacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttattttcccaa 50055  T
Q  207 ttttacctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagacaa 306  Q
    ||||  | |||||||||||| |||||||||||||| |||| ||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  50054 tttttaccttaagaacagtttaattgattaatttttagaaattacatattatgactattgaaaga-taatcccacccttaccttagaattgcaaagacaa 49956  T
Q  307 atagcacaa-taaatcagttcctaagttcttttctct 342  Q
    |||||||||  |||||||||||||||||||| |||||    
T  49955 atagcacaacaaaatcagttcctaagttcttctctct 49919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 154; Significance: 1e-81; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 58 - 342
Target Start/End: Original strand, 19236723 - 19237005
Alignment:
Q  58 aattcatccatcatattctattcccattccaattctgatcacaatcaacaacatagattaagaaatcatactaaacatcatattacaacacaataaacct 157  Q
    ||||||| ||||||| ||||||  ||||||||||  |||||  |||||||||||||||||||||  |||||||||| ||| | |||||||  ||||||||    
T  19236723 aattcattcatcatactctattttcattccaattacgatcagcatcaacaacatagattaagaacacatactaaac-tcaaagtacaacaatataaacct 19236821  T
Q  158 gattcttacacctttcctttcaaaatcatcattaacccttaa-ttcccaattttacctttaagaacagttcaattgattaattttcagaagttatatatt 256  Q
    ||| |||| |||||| |||||||||||||| |||||||| || |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  19236822 gatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttacc-ttaagaacagttcaattgattaattttcagaaattatatatt 19236920  T
Q  257 atgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaatagcacaataaatcagttcctaagttcttttctct 342  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||| |||||    
T  19236921 atgactattgaaaga-taatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatcagttcctaagttcttctctct 19237005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 58 - 342
Target Start/End: Original strand, 22460978 - 22461261
Alignment:
Q  58 aattcatccatcatattctattcccattccaattctgatcacaatcaacaacatagattaagaaatcatactaaacatcatattacaacacaataaacct 157  Q
    ||||||| ||||||||||||||  ||||||||||  |||||  |||||||||||||| ||||||| |||||||||||||| | ||| |||  ||||||||    
T  22460978 aattcattcatcatattctattttcattccaattacgatcagcatcaacaacatagaataagaaaacatactaaacatcaaagtacgacaatataaacct 22461077  T
Q  158 gattcttacacctttcctttcaaaatcatcattaacccttaa-ttcccaattttacctttaagaacagttcaattgattaa-ttttcagaagttatatat 255  Q
    ||| |||| |||||| ||||| |||||||| |||||||| || |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||    
T  22461078 gatccttataccttttctttc-aaatcatccttaaccctaaatttcccaattttacc-ttaagaacagttcaattgattaatttttcagaaattatatat 22461175  T
Q  256 tatgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaatagcacaataaatcagttcctaagttcttttctct 342  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||  |||||  |||||||||| ||||||||| |||||    
T  22461176 tatgactattgaaaga-taatcccacccttaccttagaattgcaaagacaaaaggcacagcaaatcagttcttaagttcttctctct 22461261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 58 - 342
Target Start/End: Original strand, 22467602 - 22467885
Alignment:
Q  58 aattcatccatcatattctattcccattccaattctgatcacaatcaacaacatagattaagaaatcatactaaacatcatattacaacacaataaacct 157  Q
    ||||||| ||||||||||||||  ||||||||||  |||||  |||||||||||||| ||||||| |||||||||||||| | ||| |||  ||||||||    
T  22467602 aattcattcatcatattctattttcattccaattacgatcagcatcaacaacatagaataagaaaacatactaaacatcaaagtacgacaatataaacct 22467701  T
Q  158 gattcttacacctttcctttcaaaatcatcattaacccttaa-ttcccaattttacctttaagaacagttcaattgattaa-ttttcagaagttatatat 255  Q
    ||| |||| |||||| ||||| |||||||| |||||||| || |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||    
T  22467702 gatccttataccttttctttc-aaatcatccttaaccctaaatttcccaattttacc-ttaagaacagttcaattgattaatttttcagaaattatatat 22467799  T
Q  256 tatgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaatagcacaataaatcagttcctaagttcttttctct 342  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||  |||||  |||||||||| ||||||||| |||||    
T  22467800 tatgactattgaaaga-taatcccacccttaccttagaattgcaaagacaaaaggcacagcaaatcagttcttaagttcttctctct 22467885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 60 - 303
Target Start/End: Original strand, 20772796 - 20773035
Alignment:
Q  60 ttcatccatcatattctattcccattccaattctgatcacaatcaacaacatagattaagaaatcatactaaacatcatattacaacacaataaacctga 159  Q
    ||||||||| |||||||| |  ||| |||||| ||||||  |||||||| ||||| || ||||||||||||| ||||| || ||||||  ||||||||||    
T  20772796 ttcatccattatattctactttcat-ccaattatgatcaacatcaacaatatagagtaggaaatcatactaatcatcaaat-acaacattataaacctga 20772893  T
Q  160 ttcttacacctttcctttcaaaatcatcattaacccttaa-ttcccaattttacctttaagaacagttcaattgattaattttcagaagttatatattat 258  Q
    ||||||||| ||| ||| ||||||||||||||||||| || |||||||||||||| |||||||||||| ||||||||||||||||||| | |||||||||    
T  20772894 ttcttacacattttctt-caaaatcatcattaaccctaaatttcccaattttacc-ttaagaacagttaaattgattaattttcagaaatcatatattat 20772991  T
Q  259 gactattgaaagagaaatcccacccttaccttagaattgcaaaga 303  Q
     ||||||||||||  ||||||||||||||||||||||||||||||    
T  20772992 aactattgaaaga-taatcccacccttaccttagaattgcaaaga 20773035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 60 - 303
Target Start/End: Original strand, 20781571 - 20781810
Alignment:
Q  60 ttcatccatcatattctattcccattccaattctgatcacaatcaacaacatagattaagaaatcatactaaacatcatattacaacacaataaacctga 159  Q
    ||||||||| |||||||| |  ||| |||||| ||||||  |||||||| ||||| || ||||||||| ||| ||||| || ||||||  ||||||||||    
T  20781571 ttcatccattatattctactttcat-ccaattatgatcaacatcaacaatatagagtaggaaatcataataatcatcaaat-acaacattataaacctga 20781668  T
Q  160 ttcttacacctttcctttcaaaatcatcattaacccttaa-ttcccaattttacctttaagaacagttcaattgattaattttcagaagttatatattat 258  Q
    ||||||||| ||| ||| ||||||||||||||||||| || |||||||||||||| |||||||||||| ||||||||||||||||||| | |||||||||    
T  20781669 ttcttacacattttctt-caaaatcatcattaaccctaaatttcccaattttacc-ttaagaacagttaaattgattaattttcagaaatcatatattat 20781766  T
Q  259 gactattgaaagagaaatcccacccttaccttagaattgcaaaga 303  Q
     | ||||||||||  ||||||||||||||||||||||||||||||    
T  20781767 aattattgaaaga-taatcccacccttaccttagaattgcaaaga 20781810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 59 - 303
Target Start/End: Complemental strand, 24930160 - 24929917
Alignment:
Q  59 attcatccatcatattctattcccattccaa-ttctgatcacaatcaacaacatagattaagaaatcatactaaacatcatattacaacacaataaacct 157  Q
    ||||||| |||||||||||||  || ||||| || ||||||  |||||||  |||||||| ||||||||||||| ||||| || ||||||  ||||||||    
T  24930160 attcatctatcatattctattttcactccaaattatgatcaatatcaacattatagattaggaaatcatactaatcatcaaat-acaacattataaacct 24930062  T
Q  158 gattcttacacctttcctttcaaaatcatcattaacccttaatt-cccaattttacctttaagaacagttcaattgattaa-ttttcagaagttatatat 255  Q
    ||||||||||| ||||||| || |||||||||||||||| |||| |||||||||||||| |||||||||| |||||||||| |||| |||| | ||||||    
T  24930061 gattcttacacatttcctt-cagaatcatcattaaccctaaatttcccaattttacctt-aagaacagttaaattgattaattttttagaaatcatatat 24929964  T
Q  256 tatgactattgaaagagaaatcccacccttaccttagaattgcaaaga 303  Q
    ||  ||||||||||||  |||||||||||||||||||||||| |||||    
T  24929963 tagaactattgaaaga-taatcccacccttaccttagaattgtaaaga 24929917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 111 - 299
Target Start/End: Original strand, 34829960 - 34830146
Alignment:
Q  111 tagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaatttt 210  Q
    ||||||||||||||||||| | ||||| ||||||||||| ||||| ||||||||||| |||| |||||||||||| ||| |  || |||||| |||||||    
T  34829960 tagattaagaaatcatactgatcatcaaattacaacacattaaacatgattcttacatcttt-ctttcaaaatcagcatcataccctaattctcaatttt 34830058  T
Q  211 acctttaagaacagttcaatt-gattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgca 299  Q
    | ||| ||||||  ||| ||| |||| |||||||||| ||||| ||||  | ||||||||||  ||||||||||||||||||||||||||    
T  34830059 atcttcaagaactattctattagattgattttcagaaattatacatta-aattattgaaaga-taatcccacccttaccttagaattgca 34830146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 267
Target Start/End: Complemental strand, 18408220 - 18407967
Alignment:
Q  15 caacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattccaattctgatcacaatcaacaacatag 113  Q
    ||||||||||||||  ||||| || ||||||||||||| || ||||||   ||| |  |||||| || |  || |||||||||||||  |||||  ||||    
T  18408220 caacaacaattcagatcattctagcaatcatacaaaacctctccaattttcccaaccaattctaatctccctcaaattctgatcacag-caacattatag 18408122  T
Q  114 attaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaa-ttttac 212  Q
    ||||||||||||| || ||||| | |    |||||| ||||| ||||||||||||| ||||||||||||||| ||| ||||| |||||||||| |||||     
T  18408121 attaagaaatcattctgaacatgaaaactaaacacattaaacatgattcttacaccattcctttcaaaatcagcatcaaccc-taattcccaatttttat 18408023  T
Q  213 ctttaagaacagttcaatt-gattaattttcagaagttatatattatgactattga 267  Q
     || ||||||| ||||||| ||| ||||||||||| ||||||||||||| ||||||    
T  18408022 tttcaagaacaattcaattagatcaattttcagaaattatatattatgattattga 18407967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 9 - 267
Target Start/End: Complemental strand, 23111482 - 23111223
Alignment:
Q  9 catcatcaacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattcc-aattctgatcacaatcaac 106  Q
    ||||| |||||||||||||| |||||| || |||||||||||||||| |||||| ||||  || |||||| || | |||  |||| ||||| ||  ||||    
T  23111482 catcaacaacaacaattcagaccattctagcaatcatacaaaacttctccaatttatcccacaaattctaatctccttcataattttgatcccag-caac 23111384  T
Q  107 aacatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaa 206  Q
    |  ||||||||||||||||| ||||||   | | || |||||| ||||| ||||||||||||| | ||||||||||||| ||| ||||| ||||||||||    
T  23111383 attatagattaagaaatcattctaaaccctaaacta-aacacattaaacatgattcttacaccatccctttcaaaatcagcatcaaccc-taattcccaa 23111286  T
Q  207 -ttttacctttaagaacagttcaatt-gattaattttcagaagttatatattatgactattga 267  Q
     |||||  || ||||||| ||||||| ||| ||||||||||| ||||||| ||||| ||||||    
T  23111285 tttttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattga 23111223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 176 - 300
Target Start/End: Original strand, 20820157 - 20820279
Alignment:
Q  176 ttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaa 275  Q
    ||||||||||||||||||||| | || ||||||||||| |||||||| ||| ||||  |||||  |||||| ||||||||||  ||||||||||||   |    
T  20820157 ttcaaaatcatcattaaccctaattttccaattttacc-ttaagaacggttgaattacttaatcatcagaaattatatattaacactattgaaaga-tga 20820254  T
Q  276 tcccacccttaccttagaattgcaa 300  Q
    |||||||||||||||||||||||||    
T  20820255 tcccacccttaccttagaattgcaa 20820279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 176 - 300
Target Start/End: Original strand, 20827257 - 20827379
Alignment:
Q  176 ttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaa 275  Q
    ||||||||||||||||||||| | || ||||||||||| |||||||| ||| ||||  |||||  |||||| ||||||||||  ||||||||||||   |    
T  20827257 ttcaaaatcatcattaaccctaattttccaattttacc-ttaagaacggttgaattacttaatcatcagaaattatatattaacactattgaaaga-tga 20827354  T
Q  276 tcccacccttaccttagaattgcaa 300  Q
    |||||||||||||||||||||||||    
T  20827355 tcccacccttaccttagaattgcaa 20827379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 112 - 342
Target Start/End: Complemental strand, 28909467 - 28909240
Alignment:
Q  112 agattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaaccctta-attcccaatttt 210  Q
    |||||| ||||||||||||| ||| | | ||||||   |||||||||| | |||| | ||| | |||||||||||||| || ||| |  |||||||||||    
T  28909467 agattaggaaatcatactaatcatta-aatacaacgtcataaacctgaattttacgcattttc-ttcaaaatcatcatcaaacctaattttcccaatttt 28909370  T
Q  211 acctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaatag 310  Q
      | ||||||||| || ||| | ||||||||||||| | ||||| ||| ||||||||||||   |||||||||||||||||||||||||| |||||| ||    
T  28909369 taccttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaaga-tgatcccacccttaccttagaattgcaacgacaaa-ag 28909272  T
Q  311 cacaataaatcagttcctaagttcttttctct 342  Q
    ||||  |||||| |||||| |||||| |||||    
T  28909271 cacagcaaatcaattcctaggttcttctctct 28909240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 112 - 342
Target Start/End: Complemental strand, 28945862 - 28945635
Alignment:
Q  112 agattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaaccctta-attcccaatttt 210  Q
    |||||| ||||||||||||| ||| | | ||||||   |||||||||| | |||| | ||| | |||||||||||||| || ||| |  |||||||||||    
T  28945862 agattaggaaatcatactaatcatta-aatacaacgtcataaacctgaattttacgcattttc-ttcaaaatcatcatcaaacctaattttcccaatttt 28945765  T
Q  211 acctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaatag 310  Q
      | ||||||||| || ||| | ||||||||||||| | ||||| ||| ||||||||||||   |||||||||||||||||||||||||| |||||| ||    
T  28945764 taccttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaaga-tgatcccacccttaccttagaattgcaacgacaaa-ag 28945667  T
Q  311 cacaataaatcagttcctaagttcttttctct 342  Q
    ||||  |||||| |||||| |||||| |||||    
T  28945666 cacagcaaatcaattcctaggttcttctctct 28945635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 342
Target Start/End: Complemental strand, 28896219 - 28895992
Alignment:
Q  112 agattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaaccctta-attcccaatttt 210  Q
    |||||| ||||||||||||| ||| | | ||||||   |||||||||| | |||| | ||| | |||||||||||||| || ||| |  |||||||||||    
T  28896219 agattaggaaatcatactaatcatta-aatacaacgtcataaacctgaattttacgcattttc-ttcaaaatcatcatcaaacctaattttcccaatttt 28896122  T
Q  211 acctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaatag 310  Q
      | ||||||||| || ||| | ||||||||||||| | ||||| ||| ||||||||||||   |||||||||||||||||||||||||| | |||| ||    
T  28896121 taccttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaaga-tgatcccacccttaccttagaattgcaacggcaaa-ag 28896024  T
Q  311 cacaataaatcagttcctaagttcttttctct 342  Q
    ||||  |||||| |||||| |||||| |||||    
T  28896023 cacagcaaatcaattcctaggttcttctctct 28895992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 342
Target Start/End: Complemental strand, 28925045 - 28924818
Alignment:
Q  112 agattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaaccctta-attcccaatttt 210  Q
    |||||| ||||||||||||| ||| | | ||||||   |||||||||| | |||| | ||| | |||||||||||||| || ||| |  |||||||||||    
T  28925045 agattaggaaatcatactaatcatta-aatacaacgtcataaacctgaattttacgcattttc-ttcaaaatcatcatcaaacctaattttcccaatttt 28924948  T
Q  211 acctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaatag 310  Q
      | ||||||||| || ||| | ||||||||||||| | ||||| ||| ||||||||||||   |||||||||||||||||||||||||| | |||| ||    
T  28924947 taccttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaaga-tgatcccacccttaccttagaattgcaacggcaaa-ag 28924850  T
Q  311 cacaataaatcagttcctaagttcttttctct 342  Q
    ||||  |||||| |||||| |||||| |||||    
T  28924849 cacagcaaatcaattcctaggttcttctctct 28924818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 112 - 300
Target Start/End: Complemental strand, 28889515 - 28889329
Alignment:
Q  112 agattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaaccctta-attcccaatttt 210  Q
    |||||| ||||||||||||| ||| | | ||||||   |||||||||| | |||| | ||| | |||||||||||||| || ||| |  |||||||||||    
T  28889515 agattaggaaatcatactaatcatta-aatacaacgtcataaacctgaattttacgcattttc-ttcaaaatcatcatcaaacctaattttcccaatttt 28889418  T
Q  211 acctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaa 300  Q
      | ||||||||| || ||| | ||||||||||||| | ||||| ||| ||||||||||||   ||||||||||||||||||||||||||    
T  28889417 taccttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaaga-tgatcccacccttaccttagaattgcaa 28889329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 22438927 - 22438828
Alignment:
Q  112 agattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctt-tcaaaatcatcattaacccttaattcccaatttt 210  Q
    |||||||| | |||| || |||||||  |||||||||| ||||||  ||||||||||| ||||||  |||||||  ||| ||||| ||||||||||||||    
T  22438927 agattaaggattcattctgaacatcaatttacaacacattaaacccaattcttacaccattccttcccaaaatcggcatcaaccc-taattcccaatttt 22438829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 148; Significance: 5e-78; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 139 - 342
Target Start/End: Complemental strand, 2064 - 1862
Alignment:
Q  139 attacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaattgattaat 238  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  2064 attacaacacaataaacctaattcttacaccttttctttcaaaatcatcattaacccttaattcccaattttactttcaagaacagttcaattgattaat 1965  T
Q  239 tttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaatagcacaataaatcagttcctaagttctttt 338  Q
    |||||||| ||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||| ||||||  ||||| |||||||||||||| |    
T  1964 tttcagaaattatatattatgactattgaaaga-taatcccacccttaccttacaattgcaaagacaaaaagcacagcaaatccgttcctaagttcttct 1866  T
Q  339 ctct 342  Q
    ||||    
T  1865 ctct 1862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 143; Significance: 4e-75; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 58 - 342
Target Start/End: Complemental strand, 20008180 - 20007897
Alignment:
Q  58 aattcatccatcatattctattcccattccaattctgatcacaatcaacaacatagattaagaaatcatactaaacatcatattacaacacaataaacct 157  Q
    ||||||| ||||||||||||||  ||||||||||  |||||  |||||||| ||||||||||||| |||||||||||||| | |||||||  ||||||||    
T  20008180 aattcattcatcatattctattttcattccaattacgatcagcatcaacaatatagattaagaaaacatactaaacatcaaagtacaacaatataaacct 20008081  T
Q  158 gattcttacacctttcctttcaaaatcatcattaacccttaatt-cccaattttacctttaagaacagttcaattgattaa-ttttcagaagttatatat 255  Q
    ||| |||| |||||| |||||||||||||| |||||||| |||| |||||||||||||| ||||||||||||||||||||| |||||| || ||||||||    
T  20008080 gatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttacctt-aagaacagttcaattgattaatttttcataaattatatat 20007982  T
Q  256 tatgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaatagcacaataaatcagttcctaagttcttttctct 342  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||| ||||||  |||| ||||||||||||||| |||||    
T  20007981 tatgactattgaaaga-tgatcccacccttaccttagaattgcaaagacaaa-agcacagcaaatgagttcctaagttcttctctct 20007897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 58 - 303
Target Start/End: Complemental strand, 9099304 - 9099060
Alignment:
Q  58 aattcatccatcatattctattcccattccaa-ttctgatcacaatcaacaacatagattaagaaatcatactaaacatcatattacaacacaataaacc 156  Q
    |||||||| |||||||||||||  || ||||| || ||||||  |||||||| |||||||| ||||||||||||| ||||| || ||||||  |||||||    
T  9099304 aattcatctatcatattctattttcactccaaattatgatcaatatcaacaatatagattaggaaatcatactaatcatcaaat-acaacattataaacc 9099206  T
Q  157 tgattcttacacctttcctttcaaaatcatcattaacccttaatt-cccaattttacctttaagaacagttcaattgattaatttt-cagaagttatata 254  Q
    |||||||||||| ||| ||| || |||||||||||||||| |||| |||||||||||||| |||||||||| |||||||||||||| ||||| | |||||    
T  9099205 tgattcttacacattttctt-cagaatcatcattaaccctaaatttcccaattttacctt-aagaacagttaaattgattaatttttcagaaatcatata 9099108  T
Q  255 ttatgactattgaaagagaaatcccacccttaccttagaattgcaaaga 303  Q
    |||| |||||||||||| || ||||||||||||||||||||||||||||    
T  9099107 ttataactattgaaagataa-tcccacccttaccttagaattgcaaaga 9099060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 9 - 210
Target Start/End: Original strand, 9187268 - 9187467
Alignment:
Q  9 catcatcaacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattccaattctgatcacaatcaaca 107  Q
    ||||| ||||||||||||||  ||||| || |||||||||||||||| |||||| ||||| || |||||| |  ||||| |||||||||||||| |||||    
T  9187268 catcaacaacaacaattcagatcattctagcaatcatacaaaacttctccaatttatccaaca-attctaatttcattcaaattctgatcacaa-caaca 9187365  T
Q  108 acatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaat 207  Q
      ||||||||||||||||| || ||||  | ||||||||||| ||||| ||||||||||| | ||||||||||||||| ||| ||||| |||||||||||    
T  9187366 ttatagattaagaaatcattctgaacactaaattacaacacattaaacatgattcttacatcattcctttcaaaatcagcatcaaccc-taattcccaat 9187464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 112 - 307
Target Start/End: Original strand, 31252299 - 31252493
Alignment:
Q  112 agattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaatttta 211  Q
    |||||||||||||||||  | ||||| ||||||||||  ||||| | |||||||||||||| |||||||||||| | | |  || |||||| ||||||||    
T  31252299 agattaagaaatcatacatagcatcaaattacaacacgttaaacataattcttacaccttt-ctttcaaaatcagcctcataccctaattctcaatttta 31252397  T
Q  212 cctttaagaacagttcaatt-gattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaa 307  Q
     ||| ||||||  ||||||| ||||||||||||||| ||||||||||| |  ||| |||||  |||| |||||||||||||||||||||||||||||    
T  31252398 tcttcaagaactattcaattagattaattttcagaaattatatattataatcattaaaaga-taatctcacccttaccttagaattgcaaagacaaa 31252493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 85 - 342
Target Start/End: Complemental strand, 21364684 - 21364433
Alignment:
Q  85 tccaattctgatcacaatcaacaacatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatc 184  Q
    ||||||| ||||||  |||||||| | ||| || ||||||||| ||| ||||| || ||||||  |||||||| | |||||||  ||| |||  |||||     
T  21364684 tccaattatgatcaacatcaacaatacagagtaggaaatcatattaatcatcaaat-acaacattataaacctaagtcttacatattttcttcaaaaatg 21364586  T
Q  185 atcattaacccttaattcccaattttacctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccaccct 284  Q
      |||||||||| | |||||||||||||| | ||  |||||| ||||| ||||||||||||| | ||||||||| | || |||| || || |||||||||    
T  21364585 c-cattaaccctaatttcccaattttaccataaa--acagttaaattgcttaattttcagaaatcatatattatcattactgaaggataa-tcccaccct 21364490  T
Q  285 taccttagaattgcaaagacaaatagcacaataaatcagttcctaagttcttttctct 342  Q
    |||||| |||||||||||||||| ||||||  ||| || |||||| |||||| |||||    
T  21364489 tacctttgaattgcaaagacaaa-agcacagcaaaacaattcctaggttcttctctct 21364433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 85 - 342
Target Start/End: Complemental strand, 23968666 - 23968415
Alignment:
Q  85 tccaattctgatcacaatcaacaacatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatc 184  Q
    ||||||| ||||||  |||||||| | ||| || ||||||||| ||| ||||| || ||||||  |||||||| | |||||||  ||| |||  |||||     
T  23968666 tccaattatgatcaacatcaacaatacagagtaggaaatcatattaatcatcaaat-acaacattataaacctaagtcttacatattttcttcaaaaatg 23968568  T
Q  185 atcattaacccttaattcccaattttacctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccaccct 284  Q
      |||||||||| | |||||||||||||| | ||  |||||| ||||| ||||||||||||| | ||||||||| | || |||| || || |||||||||    
T  23968567 c-cattaaccctaatttcccaattttaccataaa--acagttaaattgcttaattttcagaaatcatatattatcattactgaaggataa-tcccaccct 23968472  T
Q  285 taccttagaattgcaaagacaaatagcacaataaatcagttcctaagttcttttctct 342  Q
    |||||| |||||||||||||||| ||||||  ||| || |||||| |||||| |||||    
T  23968471 tacctttgaattgcaaagacaaa-agcacagcaaaacaattcctaggttcttctctct 23968415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 112 - 307
Target Start/End: Original strand, 15458365 - 15458560
Alignment:
Q  112 agattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaatttta 211  Q
    |||||||||||||||||  ||||||| ||||| |||   ||||| | ||||||||||||||| ||||||||||    | |  || |||||| ||||||||    
T  15458365 agattaagaaatcatacataacatca-attaccacatgttaaacataattcttacacctttc-tttcaaaatcggtctcataccctaattctcaatttta 15458462  T
Q  212 cctttaagaacagttcaatt-gattaatttt--cagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaa 307  Q
       |||| |||  ||||||| ||||||||||  ||||| ||||||||||| |  ||||||||| || ||||||||||||||||||||||||||||||||    
T  15458463 ttcttaaaaactattcaattagattaattttttcagaaattatatattataatcattgaaagataa-tcccacccttaccttagaattgcaaagacaaa 15458560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 112 - 307
Target Start/End: Original strand, 15464960 - 15465155
Alignment:
Q  112 agattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaatttta 211  Q
    |||||||||||||||||  ||||||| ||||| |||   ||||| | ||||||||||||||| ||||||||||    | |  || |||||| ||||||||    
T  15464960 agattaagaaatcatacataacatca-attaccacatgttaaacataattcttacacctttc-tttcaaaatcggtctcataccctaattctcaatttta 15465057  T
Q  212 cctttaagaacagttcaatt-gattaatttt--cagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaa 307  Q
       |||| |||  ||||||| ||||||||||  ||||| ||||||||||| |  ||||||||| || ||||||||||||||||||||||||||||||||    
T  15465058 ttcttaaaaactattcaattagattaattttttcagaaattatatattataatcattgaaagataa-tcccacccttaccttagaattgcaaagacaaa 15465155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 307
Target Start/End: Complemental strand, 11288721 - 11288653
Alignment:
Q  238 ttttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaa 307  Q
    ||||||||| |||||||||| ||  ||||||||| || ||||||||||||||||||||||| ||||||||    
T  11288721 ttttcagaaattatatattaagatcattgaaagataa-tcccacccttaccttagaattgccaagacaaa 11288653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 126
Target Start/End: Complemental strand, 24513126 - 24513008
Alignment:
Q  9 catcatcaacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattc-caattctgatcacaatcaac 106  Q
    ||||| ||||||||||||||  ||||| || |||||||||||||||| |||||| ||||| || |||||| |  |||||  |||||||||||||| ||||    
T  24513126 catcaacaacaacaattcagatcattctagcaatcatacaaaacttctccaatttatccaacaaattctaatttcattcaaaattctgatcacaa-caac 24513028  T
Q  107 aacatagattaagaaatcat 126  Q
    |  |||||| ||||||||||    
T  24513027 attatagatcaagaaatcat 24513008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 307
Target Start/End: Original strand, 24563474 - 24563508
Alignment:
Q  273 aaatcccacccttaccttagaattgcaaagacaaa 307  Q
    ||||| |||||||||||||||||||||||||||||    
T  24563474 aaatctcacccttaccttagaattgcaaagacaaa 24563508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 307
Target Start/End: Complemental strand, 28288522 - 28288494
Alignment:
Q  279 cacccttaccttagaattgcaaagacaaa 307  Q
    |||||||||||||||||||||||||||||    
T  28288522 cacccttaccttagaattgcaaagacaaa 28288494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 109; Significance: 9e-55; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 15 - 342
Target Start/End: Original strand, 10020 - 10344
Alignment:
Q  15 caacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattccaattctgatcacaatcaacaacatag 113  Q
    |||||||||||||| |||||| || |||||||||||||||| |||||| ||||| || |||||| || | |   |||||||||||||| |||||  ||||    
T  10020 caacaacaattcagaccattctagcaatcatacaaaacttctccaatttatccaacaaattctaatctcctcataattctgatcacaa-caacattatag 10118  T
Q  114 attaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaattttacc 213  Q
    ||||||||||||| |||||||  | | || |||||| ||||| ||||||||||||| | ||||||||||| | ||| |||||| ||||||||||||||      
T  10119 attaagaaatcattctaaacactaaacta-aacacattaaacatgattcttacaccatccctttcaaaattagcatcaaccct-aattcccaattttatt 10216  T
Q  214 tttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaatagcac 313  Q
     | | ||||| |||||||||||||||||||||| ||| ||||||||| ||||| |||| || || ||||||||||||||||||| | ||||||| |||||    
T  10217 ctcatgaacaattcaattgattaattttcagaaattacatattatgattattggaagataa-tctcacccttaccttagaattgtagagacaaaaagcac 10315  T
Q  314 aataaatcagttcctaagttcttttctct 342  Q
    |  ||||| |||||||||||||| |||||    
T  10316 agcaaatccgttcctaagttcttctctct 10344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1469 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: scaffold1469
Description:

Target: scaffold1469; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 7 - 307
Target Start/End: Original strand, 1128 - 1425
Alignment:
Q  7 gacatcatcaacaacaattcagcccattcaagaaatcataca-aaacttcccaattcatccatcatattctattcccattccaattctgatcacaatcaa 105  Q
    ||||||| |||||||||||||||||| ||||| | ||||||| |||||||| ||||||  ||| | || |||||  ||| |||||| ||||||  | |||    
T  1128 gacatcaacaacaacaattcagcccaatcaagcattcatacagaaacttccaaattcacacataacatgctattttcat-ccaattatgatcaacaacaa 1226  T
Q  106 caacatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaatt-ccc 204  Q
    ||| | |||||| ||||||||||||| ||||| |||| ||||   ||||||||| |||||| | ||| ||| ||||||||||||||  ||| | || |||    
T  1227 caatacagattaggaaatcatactaatcatca-attataacattgtaaacctgaatcttacgcattttctt-caaaatcatcattagacctaattttccc 1324  T
Q  205 aattttacctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagac 304  Q
    ||||||||||| |||||||||| ||||| |||||||||||||   ||||||||  ||||||||||| |||||||||||||||||||||||||||||||||    
T  1325 aattttacctt-aagaacagttaaattgtttaattttcagaaagcatatattaacactattgaaag-gaaatcccacccttaccttagaattgcaaagac 1422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 9 - 210
Target Start/End: Original strand, 135245 - 135446
Alignment:
Q  9 catcatcaacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattccaattctgatcacaatcaaca 107  Q
    ||||| ||||||||||||||  ||||| || |||||||||||||||| ||||||  |||| |  |||||| |  ||||| |||||||||||||| |||||    
T  135245 catcaacaacaacaattcagatcattccagcaatcatacaaaacttctccaatttttccaaccgattctaatttcattcaaattctgatcacaa-caaca 135343  T
Q  108 acatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaat 207  Q
      ||||||||||||||||| || ||||||| ||||||||||| ||||| |||| |||||||| ||||||||||||||| ||| |||||| | ||||||||    
T  135344 ttatagattaagaaatcattctgaacatcaaattacaacacattaaacatgatccttacaccattcctttcaaaatcagcatcaaccctaatttcccaat 135443  T
Q  208 ttt 210  Q
    |||    
T  135444 ttt 135446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 112 - 307
Target Start/End: Complemental strand, 6036 - 5842
Alignment:
Q  112 agattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaatttta 211  Q
    |||||||||||||||||  ||||||| |||||||||   ||||| | ||||||||||||||| ||||||||||| | | |  || |||||| ||||||||    
T  6036 agattaagaaatcatacataacatcaaattacaacatgttaaacataattcttacacctttc-tttcaaaatcagcctcataccctaattctcaatttta 5938  T
Q  212 cctttaagaacagttcaatt-gattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaa 307  Q
     ||| ||||||  ||||||| ||||||||||||||| ||||||||||| |  ||||||||| || ||||||||||||||||||||||||||||||||    
T  5937 tcttcaagaactattcaattagattaattttcagaaattatatattataatcattgaaagataa-tcccacccttaccttagaattgcaaagacaaa 5842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 15 - 210
Target Start/End: Complemental strand, 34553 - 34359
Alignment:
Q  15 caacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattccaattctgatcacaatcaacaacatag 113  Q
    ||||||||||||||  ||||| |  ||||| |||||||||| |||||| ||||| || |||||| |  |||||||||||||||||||  |||||  ||||    
T  34553 caacaacaattcagatcattctaacaatcacacaaaacttctccaatttatccaacagattctaatttcattccaattctgatcacag-caacattatag 34455  T
Q  114 attaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaatttt 210  Q
    ||||||||||||| || ||||||| ||||||||||| ||||| | ||||||||||| ||||||||||||||| ||| ||||| ||||||||||||||    
T  34454 attaagaaatcattctgaacatcaaattacaacacattaaacataattcttacaccattcctttcaaaatcagcatcaaccc-taattcccaatttt 34359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 23751 - 23562
Alignment:
Q  110 atagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaattt 209  Q
    |||||||||||||||||||| ||||||| ||||||||||| ||||| ||||||||||| |||| |||||||||||| ||| |  || |||||| ||||||    
T  23751 atagattaagaaatcatactgaacatcaaattacaacacattaaacatgattcttacatcttttctttcaaaatcagcatcacaccctaattctcaattt 23652  T
Q  210 tacctttaagaacagttcaatt-gattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgca 299  Q
    |  ||| ||||||  |||  || ||||||||||||||| ||||| |||||||  ||| |||||  ||||||||||||||||||||||||||    
T  23651 tgtcttcaagaactattcttttagattaattttcagaaattatacattatgatcattcaaaga-taatcccacccttaccttagaattgca 23562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 87 - 297
Target Start/End: Complemental strand, 16266 - 16059
Alignment:
Q  87 caattctgatcacaatcaacaacatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcat 186  Q
    ||||| ||||||  || ||||| ||||||||  |||||||||||| ||||| || ||||||  || |||||||||||| ||| ||| ||| |||||||||    
T  16266 caattatgatcaatatgaacaatatagattagaaaatcatactaatcatcaaat-acaacatcatgaacctgattcttgcacattttctt-caaaatcat 16169  T
Q  187 cattaacccttaattcccaattttacctttaagaacagttcaattgattaatttt-cagaagttatatattatgactattgaaagagaaatcccaccctt 285  Q
    |||||||||| |||||| | ||||| ||| || ||||||| |||||||||||||| ||||| | ||||||||| |||||||||||| || ||||||||||    
T  16168 cattaaccctaaattccaatttttatcttaaa-aacagttaaattgattaatttttcagaaatcatatattataactattgaaagataa-tcccaccctt 16071  T
Q  286 accttagaattg 297  Q
    ||||||||||||    
T  16070 accttagaattg 16059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 112 - 342
Target Start/End: Complemental strand, 493206 - 492978
Alignment:
Q  112 agattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaatttta 211  Q
    ||||||||||||||||| |||||||| | |||   ||| | ||| |||||||||||||||| |||||||||||| |||||  || |||||| | ||||||    
T  493206 agattaagaaatcatacaaaacatcaaactactttaca-tcaacatgattcttacaccttttctttcaaaatcagcattataccctaattctctatttta 493108  T
Q  212 cctttaagaacagttcaatt-gattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaatag 310  Q
     ||  ||||||  ||| ||| ||||||||||||||| ||||| |||| || |||||||||| || || ||||||||||||||||||||| ||||||| ||    
T  493107 tctccaagaactattccattagattaattttcagaaattatacatta-gattattgaaagataa-tctcacccttaccttagaattgcagagacaaaaag 493010  T
Q  311 cacaataaatcagttcctaagttcttttctct 342  Q
    ||||  ||||| |||||||||||||| |||||    
T  493009 cacagcaaatccgttcctaagttcttctctct 492978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 31 - 210
Target Start/End: Complemental strand, 40793 - 40614
Alignment:
Q  31 cattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattccaattctgatcacaatcaacaacatagattaagaaatcatact 129  Q
    ||||| || |||||||||||||||| |||||| ||||| |  |||||| |  ||||| ||||||||||||| ||||||  ||||||||||||||||| ||    
T  40793 cattctagcaatcatacaaaacttctccaatttatccaaccgattctaatttcattcaaattctgatcaca-tcaacattatagattaagaaatcattct 40695  T
Q  130 aaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaatttt 210  Q
     ||||||| ||||||||||  ||||| |||| |||||||| ||||||||||||||| ||| |||||| | |||||||||||    
T  40694 gaacatcaaattacaacacgttaaacatgatccttacaccattcctttcaaaatcagcatcaaccctaatttcccaatttt 40614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 103 - 335
Target Start/End: Complemental strand, 3590 - 3359
Alignment:
Q  103 caacaacatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattc 202  Q
    ||||| ||||||||||||||||||||  || |||| ||||||||| | ||||| |||||||||||||||| ||||||||||||   | |  || ||||||    
T  3590 caacatcatagattaagaaatcatacagaatatcaaattacaacatattaaacatgattcttacaccttt-ctttcaaaatcagtctcataccctaattc 3492  T
Q  203 ccaattttacctttaagaacagttcaatt-gattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaa 301  Q
     |||||||| ||| ||||||  |||  || ||||||||||||||| ||||||||||     |||||||||  |||  |||||||||||||||||||||||    
T  3491 tcaattttatcttcaagaactattcttttagattaattttcagaaattatatattaaattcattgaaaga-taatatcacccttaccttagaattgcaaa 3393  T
Q  302 gacaaatagcacaataaatcagttcctaagttct 335  Q
    |||||| |||||   ||||| |||||||||||||    
T  3392 gacaaaaagcacggcaaatccgttcctaagttct 3359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 150 - 342
Target Start/End: Original strand, 912 - 1101
Alignment:
Q  150 ataaacctgattcttacacctttcctttcaaaatcatcattaacccttaatt-cccaattttacctttaagaacagttcaattgattaattttcagaagt 248  Q
    |||||||| | |||||||| ||| ||| |||||||  |||||||||| | || |||||||||||| | |||||||||| ||||| ||||||||||||| |    
T  912 ataaacctaaatcttacacattttctt-caaaatcgccattaaccctaattttcccaattttaccat-aagaacagttaaattgcttaattttcagaaat 1009  T
Q  249 tatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaatagcacaataaatcagttcctaagttcttttctct 342  Q
     ||||||||| |||||||| |||  | |||||||||||||||||||||||||||||||| ||||||  |||||| |||||| |||||| |||||    
T  1010 catatattatcactattgagagatga-tcccacccttaccttagaattgcaaagacaaa-agcacagcaaatcaattcctaggttcttctctct 1101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 15 - 267
Target Start/End: Complemental strand, 284 - 31
Alignment:
Q  15 caacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattccaattctgatcacaatcaacaacatag 113  Q
    ||||||||||||||  ||||| || |||||||||||||||| |||||| ||||| || |||||| |  | ||| |||||||| ||||| ||||   ||||    
T  284 caacaacaattcagatcattctagcaatcatacaaaacttctccaatttatccaacaaattctaatttccttcaaattctgaccacaa-caacgttatag 186  T
Q  114 attaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaa-ttttac 212  Q
    ||||||||||||| || ||||  | |||| ||| || ||||| ||||||||||||| ||||||||||||||| ||  ||||| |||||||||| |||||     
T  185 attaagaaatcattctgaacactaaattaaaactcattaaacatgattcttacaccattcctttcaaaatcagcaacaaccc-taattcccaatttttat 87  T
Q  213 ctttaagaacagttcaatt-gattaattttcagaagttatatattatgactattga 267  Q
     || ||||||| ||||||| ||| ||||||||||| |||| ||||| || ||||||    
T  86 tttcaagaacaattcaattagatcaattttcagaaattatgtattaagattattga 31  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 110 - 296
Target Start/End: Complemental strand, 10731 - 10546
Alignment:
Q  110 atagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaattt 209  Q
    |||||||||||||||||||  ||||||| |||||||| || ||||| |||||||||||||||| |||||||||||| | | |  || |||||| ||||||    
T  10731 atagattaagaaatcatacagaacatcaaattacaactcattaaacatgattcttacaccttt-ctttcaaaatcagcctcataccctaattctcaattt 10633  T
Q  210 tacctttaagaacagttcaatt-gattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaatt 296  Q
    || ||| ||||||  ||| ||| ||||||||||||||| ||||| |||| ||  |||||||||  |||||||| ||||||||||||||    
T  10632 tatcttcaagaactattctattagattaattttcagaaattatacattaagatcattgaaaga-taatcccacacttaccttagaatt 10546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 110 - 299
Target Start/End: Original strand, 73158 - 73347
Alignment:
Q  110 atagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaattt 209  Q
    |||||||||||||||||||  ||||||| ||||||||||| ||||| ||||||||||||| || |||||||||||| ||| |  || |||||| ||||||    
T  73158 atagattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccgtttctttcaaaatcaacatcacaccctaattctcaattt 73257  T
Q  210 tacctttaagaacagttcaatt-gattaattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgca 299  Q
    || ||| |||| |  | | ||| |||||||||||| || ||||| |||||||  |||||||||  |||||||||||||||| | |||||||    
T  73258 tatcttcaagagctatcctattagattaattttcataaattatacattatgatcattgaaaga-taatcccacccttacctcataattgca 73347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 9 - 210
Target Start/End: Complemental strand, 22875 - 22675
Alignment:
Q  9 catcatcaacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattccaattctgatcacaatcaaca 107  Q
    ||||| ||||||||||||||  ||||| || |||||||||||||||| |||||| ||| | || |||||| |  ||||| |||||| ||||||| |||      
T  22875 catcaacaacaacaattcaggtcattctagcaatcatacaaaacttctccaatttatcaaacagattctaatttcattcaaattcttatcacaa-caatg 22777  T
Q  108 acatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaat 207  Q
      ||||||||||||| |||  | |||| || ||||||||||| ||||| ||||||||||||| ||||||||| ||||| ||| ||||| |||||||||||    
T  22776 ttatagattaagaaaccattttgaacaccaaattacaacacattaaacatgattcttacaccattcctttcagaatcagcatcaaccc-taattcccaat 22678  T
Q  208 ttt 210  Q
    |||    
T  22677 ttt 22675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 267
Target Start/End: Complemental strand, 102210 - 101951
Alignment:
Q  9 catcatcaacaacaattcagcccattcaagaaatcatacaaaacttc-ccaattcatccatcatattctattcccattccaattctgatcacaatcaaca 107  Q
    ||||| ||||||||||||||  |||   || |||||||||||||||| |||||| || || || |||||| |  ||||| ||||||||||| || |||||    
T  102210 catcaacaacaacaattcagatcatcatagcaatcatacaaaacttctccaatttattcaacaaattctaatttcattcaaattctgatcataa-caaca 102112  T
Q  108 acatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaa- 206  Q
      ||||||||||||||||| || || |||| ||| ||||||| ||||| ||||||||||||| |||||| |  ||||| ||  || |||||||||||||     
T  102111 ttatagattaagaaatcattctgaatatcaaatttcaacacattaaacatgattcttacaccattccttcctgaatcagcaacaa-ccttaattcccaat 102013  T
Q  207 ttttacctttaagaacagttcaatt-gattaattttcagaagttatatattatgactattga 267  Q
    |||||  || ||||||| ||||||| ||| ||||||||| | ||||||| ||||| ||||||    
T  102012 ttttattttcaagaacaattcaattagatcaattttcaggaattatatactatgattattga 101951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 303
Target Start/End: Complemental strand, 91408 - 91191
Alignment:
Q  85 tccaattctgatcacaatcaacaacatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatc 184  Q
    ||||||| ||||||  |||| ||| | ||| || ||||||||| ||| ||||| || ||||||  |||||||| | |||||||| ||| ||| ||||||     
T  91408 tccaattatgatcaacatcaccaatacagagtaggaaatcatattaatcatcaaat-acaacattataaacctaaatcttacacattttctt-caaaatt 91311  T
Q  185 atcattaacccttaattcccaatttt---acctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccac 281  Q
      |||||||||| | |||||||||||   ||| | || ||||||| ||||| ||||||||||||| | ||||||||| | ||||||||||  | ||||||    
T  91310 gccattaaccctaatttcccaatttttttaccataaa-aacagttaaattgcttaattttcagaaatcatatattatcattattgaaagatga-tcccac 91213  T
Q  282 ccttaccttagaattgcaaaga 303  Q
    ||||||||||||||||||||||    
T  91212 ccttaccttagaattgcaaaga 91191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 303
Target Start/End: Complemental strand, 97134 - 96917
Alignment:
Q  85 tccaattctgatcacaatcaacaacatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatc 184  Q
    ||||||| ||||||  |||| ||| | ||| || ||||||||| ||| ||||| || ||||||  |||||||| | |||||||| ||| ||| ||||||     
T  97134 tccaattatgatcaacatcaccaatacagagtaggaaatcatattaatcatcaaat-acaacattataaacctaaatcttacacattttctt-caaaatt 97037  T
Q  185 atcattaacccttaattcccaatttt---acctttaagaacagttcaattgattaattttcagaagttatatattatgactattgaaagagaaatcccac 281  Q
      |||||||||| | |||||||||||   ||| | || ||||||| ||||| ||||||||||||| | ||||||||| | ||||||||||  | ||||||    
T  97036 gccattaaccctaatttcccaatttttttaccataaa-aacagttaaattgcttaattttcagaaatcatatattatcattattgaaagatga-tcccac 96939  T
Q  282 ccttaccttagaattgcaaaga 303  Q
    ||||||||||||||||||||||    
T  96938 ccttaccttagaattgcaaaga 96917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 236 - 342
Target Start/End: Complemental strand, 10250 - 10145
Alignment:
Q  236 aattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaatagcacaataaatcagttcctaagttct 335  Q
    ||||||||||| ||||| ||||||| |||||| ||| |  |||||||||||||||||||||| | ||||||| ||||||  ||||| |||||||||||||    
T  10250 aattttcagaaattatagattatgattattgagagatag-tcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttct 10152  T
Q  336 tttctct 342  Q
    | |||||    
T  10151 tctctct 10145  T

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Target: scaffold0544 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 236 - 342
Target Start/End: Complemental strand, 1580 - 1475
Alignment:
Q  236 aattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaatagcacaataaatcagttcctaagttct 335  Q
    ||||||||||| ||||| ||||||| |||||| ||| |  |||||||||||||||||||||| | ||||||| ||||||  ||||| |||||||||||||    
T  1580 aattttcagaaattatagattatgattattgagagatag-tcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttct 1482  T
Q  336 tttctct 342  Q
    | |||||    
T  1481 tctctct 1475  T

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Target: scaffold0249 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 112 - 307
Target Start/End: Complemental strand, 14073 - 13879
Alignment:
Q  112 agattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaatttta 211  Q
    |||||||||||||||||  ||||||| ||||| |||   ||||| | ||||||||||||||| ||||||||||    | |  || |||||| ||||||||    
T  14073 agattaagaaatcatacataacatca-attaccacatgttaaacataattcttacacctttc-tttcaaaatctgtctcataccctaattctcaatttta 13976  T
Q  212 cctttaagaacagttcaatt-gattaatttt-cagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaa 307  Q
       |||| |||  ||||||| |||||||||| ||||| ||||||||||| |  ||||||||| || ||||||||||||||||||||||||||||||||    
T  13975 ttcttaaaaactattcaattagattaatttttcagaaattatatattataatcattgaaagataa-tcccacccttaccttagaattgcaaagacaaa 13879  T

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Target: scaffold0222 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 267
Target Start/End: Original strand, 16728 - 16852
Alignment:
Q  144 aacacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaa-ttttacctttaagaacagttcaatt-gattaatttt 241  Q
    |||||| ||||| ||||||||| ||| ||||||||||||||| ||| ||||| |||||||||| |||||  || ||||||| ||||||| ||| ||||||    
T  16728 aacacattaaacatgattcttaaaccattcctttcaaaatcagcatcaaccc-taattcccaatttttattttcaagaacaattcaattagatcaatttt 16826  T
Q  242 cagaagttatatattatgactattga 267  Q
    ||||| ||||||| ||||| ||||||    
T  16827 cagaaattatatactatgattattga 16852  T

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Target: scaffold0004 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 88 - 267
Target Start/End: Original strand, 116749 - 116928
Alignment:
Q  88 aattctgatcacaatcaacaacatagattaagaaatcatactaaacatcatattacaacacaataaacctgattcttacacctttcctttcaaaatcatc 187  Q
    |||||||||||||| |||||  ||||||||||||||||| || ||||  | |    |||||| ||||| ||||||||||||| ||||||||||||||| |    
T  116749 aattctgatcacaa-caacattatagattaagaaatcattctgaacacgaaaactaaacacattaaacatgattcttacaccattcctttcaaaatcagc 116847  T
Q  188 attaacccttaattcccaa-ttttacctttaagaacagttcaatt-gattaattttcagaagttatatattatgactattga 267  Q
    || ||||| ||||||  || |||||  || ||||||| ||||||| ||| ||||||||||| ||||||| ||||| ||||||    
T  116848 atcaaccc-taattctaaatttttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattga 116928  T

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Target: scaffold0146 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 267
Target Start/End: Original strand, 13547 - 13664
Alignment:
Q  151 taaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaa-ttttacctttaagaacagttcaatt-gattaattttcagaagt 248  Q
    ||||| ||||||||||||| ||||||||||||||| ||| ||||| |||||||||| |||||  || ||||||| ||||||| ||| ||||||||||| |    
T  13547 taaacatgattcttacaccattcctttcaaaatcagcatcaaccc-taattcccaatttttattttcaagaacaattcaattagatcaattttcagaaat 13645  T
Q  249 tatatattatgactattga 267  Q
    ||| ||||| || ||||||    
T  13646 tatgtattaagattattga 13664  T

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Target: scaffold0317 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 1296 - 1422
Alignment:
Q  146 cacaataaacctgattcttacacctttcctttcaaaatcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcag 244  Q
    |||||||||| | ||||||||||| ||||||||||||||| ||| || || |||||| || ||||| | | ||||||| || |||| ||| ||||||||     
T  1296 cacaataaacataattcttacaccattcctttcaaaatcagcatcaaaccctaattctcagttttatcatcaagaacaatttaattagatcaattttcaa 1395  T
Q  245 aagttatatattatgactattgaaaga 271  Q
    || |||||||| ||||  |||||||||    
T  1396 aaattatatatcatgatcattgaaaga 1422  T

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Target: scaffold0183 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 303
Target Start/End: Original strand, 6 - 70
Alignment:
Q  238 ttttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaaga 303  Q
    ||||||||| | ||||||||  |||||||||||| || ||||||||||||||||||||||||||||    
T  6 ttttcagaaatcatatattagaactattgaaagataa-tcccacccttaccttagaattgcaaaga 70  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1461 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 291
Target Start/End: Complemental strand, 1592 - 1485
Alignment:
Q  183 tcatcattaacccttaattcccaattttacctttaagaacagttcaatt-gattaattttcagaagttatatattatgactattgaaagagaaatcccac 281  Q
    ||||||||||||||||||||||||||||| ||||| |||||   ||||| ||||||||||||||| ||  |||||| ||  |||| ||||  |||| |||    
T  1592 tcatcattaacccttaattcccaattttatctttatgaaca-accaattagattaattttcagaaattgcatattaagatcattgcaaga-taatctcac 1495  T
Q  282 ccttacctta 291  Q
    ||||||||||    
T  1494 ccttacctta 1485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 236 - 307
Target Start/End: Original strand, 111686 - 111756
Alignment:
Q  236 aattttcagaagttatatattatgactattgaaagagaaatcccacccttaccttagaattgcaaagacaaa 307  Q
    ||||||||||| ||||| ||||||| |||||| ||| |  || |||||||||||||||||||| ||||||||    
T  111686 aattttcagaaattatagattatgattattgagagatag-tctcacccttaccttagaattgcgaagacaaa 111756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 226
Target Start/End: Original strand, 12821 - 12951
Alignment:
Q  101 atcaacaacatagattaagaaatcatactaaacatcatattacaacacaataaacct-gattctta-cacctttcctttcaaaatcat-cattaaccctt 197  Q
    |||||||  |||||||| ||||||||||||| |||   | |||||||  |||||||| |||||||| ||| ||||||| || |||||| ||||||||||     
T  12821 atcaacattatagattaggaaatcatactaatcatacaaatacaacattataaacctagattcttaacacatttcctt-cagaatcatacattaacccta 12919  T
Q  198 aatt--cccaatttt-acctttaagaacagtt 226  Q
    ||||  ||||||||| ||||||||||||||||    
T  12920 aatttccccaatttttacctttaagaacagtt 12951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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