View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0715_low_13 (Length: 381)

Name: NF0715_low_13
Description: NF0715
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0715_low_13
NF0715_low_13
[»] chr2 (5 HSPs)
chr2 (24-375)||(23626115-23626466)
chr2 (24-375)||(22638304-22638655)
chr2 (24-375)||(23200486-23200837)
chr2 (24-345)||(24911914-24912234)
chr2 (56-144)||(23813889-23813977)
[»] chr6 (2 HSPs)
chr6 (24-375)||(23435091-23435442)
chr6 (24-375)||(19035035-19035386)
[»] scaffold0130 (1 HSPs)
scaffold0130 (24-375)||(43131-43482)
[»] scaffold0016 (2 HSPs)
scaffold0016 (24-375)||(126416-126767)
scaffold0016 (24-324)||(179147-179447)
[»] chr7 (3 HSPs)
chr7 (24-352)||(18171491-18171819)
chr7 (53-351)||(14342542-14342840)
chr7 (210-351)||(18133578-18133719)
[»] scaffold0022 (1 HSPs)
scaffold0022 (24-375)||(11347-11698)
[»] chr4 (3 HSPs)
chr4 (24-375)||(13289224-13289575)
chr4 (24-330)||(14772424-14772730)
chr4 (56-276)||(18562450-18562670)
[»] scaffold0319 (1 HSPs)
scaffold0319 (24-375)||(9626-9977)
[»] chr8 (4 HSPs)
chr8 (24-375)||(17422711-17423062)
chr8 (24-345)||(22348621-22348942)
chr8 (24-342)||(1735317-1735635)
chr8 (35-326)||(22067798-22068088)
[»] chr3 (6 HSPs)
chr3 (24-352)||(10150797-10151125)
chr3 (85-355)||(13306794-13307064)
chr3 (26-375)||(14693085-14693434)
chr3 (35-351)||(7401854-7402170)
chr3 (24-345)||(10782173-10782494)
chr3 (35-150)||(7365311-7365426)
[»] scaffold0040 (1 HSPs)
scaffold0040 (24-375)||(29608-29959)
[»] chr5 (1 HSPs)
chr5 (24-345)||(21511006-21511327)
[»] scaffold0108 (1 HSPs)
scaffold0108 (26-375)||(26194-26543)
[»] scaffold0005 (1 HSPs)
scaffold0005 (24-342)||(66988-67306)
[»] scaffold0282 (1 HSPs)
scaffold0282 (24-345)||(5395-5716)
[»] scaffold0241 (1 HSPs)
scaffold0241 (24-342)||(11493-11811)
[»] scaffold0064 (1 HSPs)
scaffold0064 (24-352)||(37450-37778)
[»] scaffold0026 (1 HSPs)
scaffold0026 (24-345)||(138830-139151)
[»] scaffold0001 (1 HSPs)
scaffold0001 (24-350)||(126617-126943)
[»] scaffold0656 (1 HSPs)
scaffold0656 (24-330)||(5072-5378)
[»] chr1 (3 HSPs)
chr1 (47-345)||(22805718-22806016)
chr1 (24-183)||(41380255-41380414)
chr1 (263-351)||(41380419-41380507)
[»] scaffold0051 (1 HSPs)
scaffold0051 (24-204)||(69601-69781)
[»] scaffold0362 (1 HSPs)
scaffold0362 (35-330)||(14471-14766)
[»] scaffold0046 (1 HSPs)
scaffold0046 (35-282)||(33627-33874)
[»] scaffold0107 (2 HSPs)
scaffold0107 (35-223)||(4273-4461)
scaffold0107 (218-345)||(1874-2001)
[»] scaffold0019 (1 HSPs)
scaffold0019 (188-345)||(159086-159243)
[»] scaffold0023 (2 HSPs)
scaffold0023 (237-345)||(65268-65376)
scaffold0023 (237-345)||(74446-74554)
[»] scaffold0013 (3 HSPs)
scaffold0013 (68-324)||(75405-75661)
scaffold0013 (53-282)||(83876-84105)
scaffold0013 (53-282)||(121548-121777)
[»] scaffold0053 (1 HSPs)
scaffold0053 (188-282)||(42285-42379)
[»] scaffold0029 (1 HSPs)
scaffold0029 (128-276)||(48839-48987)
[»] scaffold0407 (2 HSPs)
scaffold0407 (191-276)||(3034-3119)
scaffold0407 (191-276)||(9500-9585)
[»] scaffold0008 (1 HSPs)
scaffold0008 (34-138)||(127000-127104)


Alignment Details
Target: chr2 (Bit Score: 264; Significance: 1e-147; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 24 - 375
Target Start/End: Original strand, 23626115 - 23626466
Alignment:
Q  24 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc 123  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  23626115 tcatcgaagtgtttgatttttcaaagactgcatgttgctcttctacacaaccgttattcatgacataatagcatagcggcttgtgagttgccatttcatc 23626214  T
Q  124 gacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagat 223  Q
    ||||||||||||||| ||||| ||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  23626215 gacgaaatcactttcaacttcgttaatttctgactgaacgtcgtattccaccggtaggatagaaaccacattgcacactatgtcgagactagggtcagat 23626314  T
Q  224 ccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaacca 323  Q
    ||||||||||| |||||||||||| ||||||||||||| |||||||| ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  23626315 ccagtgaaattcgaagtcatttctacatcctccttgggatgatcttttttcaatattgacaatgggggcgagattctctctgttgctggtttcttaacca 23626414  T
Q  324 tttcgaacacaactttctgcttaccctctgttgtctcaacattgatgatgtc 375  Q
    ||| ||||||| |||||||||||||||||||| | ||||||||| |||||||    
T  23626415 ttttgaacacagctttctgcttaccctctgttttgtcaacattggtgatgtc 23626466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 24 - 375
Target Start/End: Complemental strand, 22638655 - 22638304
Alignment:
Q  24 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc 123  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||| |||||||||||||    
T  22638655 tcattgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggcttgtgagttgccatttcatc 22638556  T
Q  124 gacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagat 223  Q
    ||||||||||||||| ||||| ||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  22638555 gacgaaatcactttcaacttcgttaatttctgactgaacgtcgtattccaccggtaggatagaaaccacattgcacactatgtcgagactagggtcagat 22638456  T
Q  224 ccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaacca 323  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  22638455 ccagtgaaattcgaagtcatttcttcatcctctttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgctggtttcttaacca 22638356  T
Q  324 tttcgaacacaactttctgcttaccctctgttgtctcaacattgatgatgtc 375  Q
    ||||||||||| | |||||||||||||||||| | ||||||| | |||||||    
T  22638355 tttcgaacacagccttctgcttaccctctgttttatcaacatcggtgatgtc 22638304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 24 - 375
Target Start/End: Original strand, 23200486 - 23200837
Alignment:
Q  24 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| || |||||| |||||||||||||    
T  23200486 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatc 23200585  T
Q  124 gacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagat 223  Q
    ||||||||||||||| ||||| ||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||    
T  23200586 gacgaaatcactttcaacttcgttaatttctgactgaacgtcgtattccaccggtaggatagaaaccacattgcacactatatcgagactagggtcagat 23200685  T
Q  224 ccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaacca 323  Q
    || |||||||| |||||||||||||||||||| ||||| |||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  23200686 cccgtgaaattcgaagtcatttcttcatcctctttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgctggtttcttaacca 23200785  T
Q  324 tttcgaacacaactttctgcttaccctctgttgtctcaacattgatgatgtc 375  Q
    ||||||||||| | |||||||||||||||||| | ||||||||| |||||||    
T  23200786 tttcgaacacagccttctgcttaccctctgttttgtcaacattggtgatgtc 23200837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 24 - 345
Target Start/End: Complemental strand, 24912234 - 24911914
Alignment:
Q  24 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc 123  Q
    |||||||||  ||||||||||||||||| |||||||| |||||||||||||| |||||||||| |||||| ||||| ||||||||  | |||||||| ||    
T  24912234 tcatcgaagcatctggtttttcaaagacagcatgttgttcttctacacaaccattattcatgacataataacatagtggcttgtgcgtcgccatttcgtc 24912135  T
Q  124 gacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagat 223  Q
     ||||| |||||||| ||||| |||| || | ||||||||||||||||||| | ||  || || ||||||||||| ||||||||||||||||||||||||    
T  24912134 aacgaagtcactttcaacttcattaacttctgactgaacgtcgtattccacagatagaattgataccacattgcatactatgtcgagactggggtcagat 24912035  T
Q  224 ccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaacca 323  Q
    ||||||||||| |||||||||||||||||||| ||||| || || ||||| |||||||||||  |||| || ||||||| | |||||||||| |||||||    
T  24912034 ccagtgaaatttgaagtcatttcttcatcctctttgggatggtccttctttaagattgacaa-gggggtgaaattctctttgttgctggttttttaacca 24911936  T
Q  324 tttcgaacacaactttctgctt 345  Q
    ||||||| ||| || |||||||    
T  24911935 tttcgaaaacagctctctgctt 24911914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 144
Target Start/End: Original strand, 23813889 - 23813977
Alignment:
Q  56 tgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcgacgaaatcactttccacttc 144  Q
    ||||| ||||| |||||||| || ||||| | ||| |||||||  ||||| | ||| ||||||||||||  ||| ||||||||||||||    
T  23813889 tgttgatcttcgacacaaccattgttcataacatagtagcataatggcttctaaatagccatttcatcggtgaattcactttccacttc 23813977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 260; Significance: 1e-145; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 24 - 375
Target Start/End: Complemental strand, 23435442 - 23435091
Alignment:
Q  24 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc 123  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |  |||||| || ||||||||||    
T  23435442 tcatcgacgtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagagaattgtgagttaccatttcatc 23435343  T
Q  124 gacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagat 223  Q
    ||||||||||||||| ||||| ||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  23435342 gacgaaatcactttcaacttcgttaatttctgactgaacgtcgtattccaccagtaagatagaaaccacattgcacactatgtcgagactagggtcagat 23435243  T
Q  224 ccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaacca 323  Q
    || |||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  23435242 cccgtgaaattcgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctattgctggtttcttaacca 23435143  T
Q  324 tttcgaacacaactttctgcttaccctctgttgtctcaacattgatgatgtc 375  Q
    ||||||||||||| |||||||||||||||||| | ||||||||| |||||||    
T  23435142 tttcgaacacaaccttctgcttaccctctgttttgtcaacattggtgatgtc 23435091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 24 - 375
Target Start/End: Original strand, 19035035 - 19035386
Alignment:
Q  24 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc 123  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||  |||||||||||||||||||||||    
T  19035035 tcatcgaagtatctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcataatggcttgtgaattgccatttcatc 19035134  T
Q  124 gacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagat 223  Q
    |||||| |||||||| ||||| ||||||| | |||| |||||||||||||| |||| ||| || ||||||||||| |  || || |||||||||||||||    
T  19035135 gacgaagtcactttcaacttcattaatttctgactgcacgtcgtattccacaggtaggatcgagaccacattgcatataatatcaagactggggtcagat 19035234  T
Q  224 ccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaacca 323  Q
    ||||||||||| |||||||||||||||||||  ||||| | || ||||||||| ||||||||| | |  |||||||||||| |||||||||| ||||| |    
T  19035235 ccagtgaaattcgaagtcatttcttcatcctttttgggattatttttcttcaaaattgacaatggagatgagattctctctgttgctggttttttaacta 19035334  T
Q  324 tttcgaacacaactttctgcttaccctctgttgtctcaacattgatgatgtc 375  Q
    ||||||||| | |||| ||||| ||||||  | | ||||||||| |||||||    
T  19035335 tttcgaacatagctttttgcttgccctctcctttgtcaacattggtgatgtc 19035386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 24 - 375
Target Start/End: Complemental strand, 43482 - 43131
Alignment:
Q  24 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||| || ||||||||||    
T  43482 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagcgccttgtgagtttccatttcatc 43383  T
Q  124 gacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagat 223  Q
    ||||||||||||||| ||||| ||||||| | |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||    
T  43382 gacgaaatcactttcaacttcgttaatttctgactgaacgtcgtattccaccagtaggatagaaaccacattgcacactatgtcgagactagggtcagat 43283  T
Q  224 ccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaacca 323  Q
    || |||||||| ||||||| |||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  43282 cccgtgaaattcgaagtcagttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgctggtttcttaacca 43183  T
Q  324 tttcgaacacaactttctgcttaccctctgttgtctcaacattgatgatgtc 375  Q
    ||| ||||||| |||||||||||||||||||| | ||||||||| |||||||    
T  43182 ttttgaacacagctttctgcttaccctctgttttatcaacattggtgatgtc 43131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 244; Significance: 1e-135; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 24 - 375
Target Start/End: Original strand, 126416 - 126767
Alignment:
Q  24 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc 123  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| || |||||| ||||||||| |||    
T  126416 tcatagaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggattgtgagttgccatttaatc 126515  T
Q  124 gacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagat 223  Q
    ||||||||||||||| ||||| ||||||| | ||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||    
T  126516 gacgaaatcactttcaacttcgttaatttctgactaaacgtcgtattccaccggtaggatagaaaccacattgcacactatatcgagactagggtcagat 126615  T
Q  224 ccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaacca 323  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||    
T  126616 ccagtgaaattcgaagtcatttcttcatcctctttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgctggtttcttaacca 126715  T
Q  324 tttcgaacacaactttctgcttaccctctgttgtctcaacattgatgatgtc 375  Q
    ||||||||||| | |||||||||||||||||| | ||||||| | |||||||    
T  126716 tttcgaacacagccttctgcttaccctctgttttatcaacatcggtgatgtc 126767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 324
Target Start/End: Original strand, 179147 - 179447
Alignment:
Q  24 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc 123  Q
    |||||||||  |||||| |||  || || |||||||| ||||| |||||||| || || || | |||||||||||| |||||||| ||   |||||| ||    
T  179147 tcatcgaagcatctggtctttggaatacagcatgttgatcttcgacacaaccattgtttataacataatagcatagtggcttgtggataatcatttcgtc 179246  T
Q  124 gacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagat 223  Q
    |   || |||||||| ||||| |||| || | |  ||||||| || || || || || |  || ||||||||||||||||| ||||  || ||||||||     
T  179247 ggtaaagtcactttctacttcgttaacttctgaaggaacgtcatactcaacaggcaacactgagaccacattgcacactatatcgaagcttgggtcagac 179346  T
Q  224 ccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaacca 323  Q
       | |||||| || ||||||||||||||||| || || || ||||||||||| ||||||||  | || |||||||| ||| | |||| ||| |||||||    
T  179347 ttggagaaattcgacgtcatttcttcatcctctttaggatggtctttcttcaaaattgacaaaggaggggagattctttctgtggctgattttttaacca 179446  T
Q  324 t 324  Q
    |    
T  179447 t 179447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 241; Significance: 1e-133; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 24 - 352
Target Start/End: Original strand, 18171491 - 18171819
Alignment:
Q  24 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc 123  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||| |||||||||||||    
T  18171491 tcattgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggcttgtgagttgccatttcatc 18171590  T
Q  124 gacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagat 223  Q
    |||||||||||||| |||||| ||||||| | ||||||||| |||||||||| ||| |||||||||||||||| |||||||||||||||| |||||||||    
T  18171591 gacgaaatcactttgcacttcgttaatttctgactgaacgttgtattccaccagtaggatagaaaccacattgtacactatgtcgagactagggtcagat 18171690  T
Q  224 ccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaacca 323  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||| ||| |||||||||| |||||||    
T  18171691 ccagtgaaattcgaagtcatttcttcatcctccttgggatgatctttcttcaagattgacaatgggggcgaaattctttctgttgctggttttttaacca 18171790  T
Q  324 tttcgaacacaactttctgcttaccctct 352  Q
    ||||||||||| |||||||||||||||||    
T  18171791 tttcgaacacagctttctgcttaccctct 18171819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 53 - 351
Target Start/End: Original strand, 14342542 - 14342840
Alignment:
Q  53 gcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcgacgaaatcactttccacttccttaattt 152  Q
    |||||||| ||||| ||||| || |||||||||| |||||||||||| ||||||||| |||||||||||||||| || ||| |||||||||| ||||| |    
T  14342542 gcatgttgttcttccacacagccattattcatgacataatagcatagtggcttgtgagttgccatttcatcgacaaagtcattttccacttcattaatct 14342641  T
Q  153 attactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagatccagtgaaattggaagtcatttcttcatc 252  Q
     | |||| || ||||||||||| || | ||| |||||||||||||| ||||||||||| || ||||||||| | |||||||| |||||||| || |||||    
T  14342642 ctgactggacatcgtattccacaggcaggattgaaaccacattgcaaactatgtcgaggctcgggtcagattccgtgaaatttgaagtcatctcctcatc 14342741  T
Q  253 ctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaaccatttcgaacacaactttctgcttaccctc 351  Q
    ||| ||||    |||||||||||| ||||||||| |||| || ||||| | | ||||||||||||||||||||||||||||| ||||||||||| ||||    
T  14342742 ctctttggaacaatctttcttcaaaattgacaatgggggtgaaattctttttgttgctggtttcttaaccatttcgaacacagctttctgcttatcctc 14342840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 210 - 351
Target Start/End: Original strand, 18133578 - 18133719
Alignment:
Q  210 gactggggtcagatccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgc 309  Q
    |||| ||||||||| | |||||||| |||||||| || ||||| || ||||   ||||||||||||  ||||||||| |||| || |||| |||| ||||    
T  18133578 gacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaacgatctttcttcagaattgacaatgggggtgaaattcgctctgttgc 18133677  T
Q  310 tggtttcttaaccatttcgaacacaactttctgcttaccctc 351  Q
    ||||||||||||||| |||||||||||||| ||||| |||||    
T  18133678 tggtttcttaaccatctcgaacacaactttttgcttgccctc 18133719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 24 - 375
Target Start/End: Complemental strand, 11698 - 11347
Alignment:
Q  24 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||| ||||||| |||||||||||||||    
T  11698 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaactattattcatgacataatagcatagtggcttgttaattgccatttcatc 11599  T
Q  124 gacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagat 223  Q
    ||||||||||||||| ||||| ||||||| | |||||||||| |||||||  |||| |||||||||||||||||| ||||||| |||||| |||||||||    
T  11598 gacgaaatcactttcaacttcgttaatttctgactgaacgtcatattccataggtaggatagaaaccacattgcatactatgttgagactagggtcagat 11499  T
Q  224 ccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaacca 323  Q
     |||||||||| |||||||||||||||||||| ||||| ||||||||||| || ||||||||| ||||||||||||||||| |||||||||| |||||||    
T  11498 tcagtgaaatttgaagtcatttcttcatcctctttgggatgatctttctttaaaattgacaatgggggcgagattctctctgttgctggttttttaacca 11399  T
Q  324 tttcgaacacaactttctgcttaccctctgttgtctcaacattgatgatgtc 375  Q
    ||||||||||| |||||||||||||||||||| | ||||||||| |||||||    
T  11398 tttcgaacacagctttctgcttaccctctgttttgtcaacattggtgatgtc 11347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 236; Significance: 1e-130; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 24 - 375
Target Start/End: Original strand, 13289224 - 13289575
Alignment:
Q  24 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||    
T  13289224 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgacataatagcatagtggcttgtgaattgacatttcatc 13289323  T
Q  124 gacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagat 223  Q
    ||||||||||||||| ||||| ||||||| | | |||||||| |||||||  |||| |||||||||||||||||| |||||||||||||| |||||||||    
T  13289324 gacgaaatcactttcaacttcgttaatttctgaatgaacgtcatattccaaaggtaggatagaaaccacattgcatactatgtcgagactagggtcagat 13289423  T
Q  224 ccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaacca 323  Q
    ||||||||||| |||||||||||||||||||| ||||| ||||||||||| || ||||||||| ||||||||||||||||| ||||||| || |||||||    
T  13289424 ccagtgaaattcgaagtcatttcttcatcctctttgggatgatctttctttaaaattgacaatgggggcgagattctctctgttgctggctttttaacca 13289523  T
Q  324 tttcgaacacaactttctgcttaccctctgttgtctcaacattgatgatgtc 375  Q
    ||||||||||| |||||||||||||||||  | | ||||||||| |||||||    
T  13289524 tttcgaacacagctttctgcttaccctctcctttgtcaacattggtgatgtc 13289575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 24 - 330
Target Start/End: Original strand, 14772424 - 14772730
Alignment:
Q  24 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc 123  Q
    ||||||||| ||||||||||||||||||  ||||||| |||||||||||||| |||||||||| |||||| ||||| ||||||||  |||||||||| ||    
T  14772424 tcatcgaagcgtctggtttttcaaagacaacatgttgttcttctacacaaccattattcatgacataataacatagtggcttgtgtgttgccatttcgtc 14772523  T
Q  124 gacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagat 223  Q
    |||||| |||||||| ||||| |||| || | ||||||||||||||||||| |||| ||| || ||||||||||| ||||| ||||||||||||||||||    
T  14772524 gacgaagtcactttcaacttcattaacttctgactgaacgtcgtattccacaggtaggatcgagaccacattgcatactatatcgagactggggtcagat 14772623  T
Q  224 ccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaacca 323  Q
    ||||||||||| |||||||||||||||||||| ||||| ||||||||||| |  ||||||||| |||| |||||||||||| |||||||||| |||||||    
T  14772624 ccagtgaaatttgaagtcatttcttcatcctctttgggatgatctttctttagaattgacaatgggggtgagattctctctgttgctggttttttaacca 14772723  T
Q  324 tttcgaa 330  Q
    |||||||    
T  14772724 tttcgaa 14772730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 56 - 276
Target Start/End: Original strand, 18562450 - 18562670
Alignment:
Q  56 tgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcgacgaaatcactttccacttccttaatttatt 155  Q
    ||||| ||||| |||||||| |||||||| | ||| |||||||  ||||| ||||| ||||||||||| | ||| |||||||||||||| || |  |       
T  18562450 tgttgatcttcgacacaaccattattcataacatagtagcataatggcttatgaatagccatttcatcaatgaagtcactttccacttcattgacctccg 18562549  T
Q  156 actgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagatccagtgaaattggaagtcatttcttcatcctc 255  Q
    |  |||| |||||||| ||  |||  |  || || |||||||| | |||||||||||| ||||||||| |||  || || || |||||||||||||| ||    
T  18562550 aaggaacatcgtattcgactagtagcactgacacgacattgcatattatgtcgagactcgggtcagattcagaaaagtttgacgtcatttcttcatcttc 18562649  T
Q  256 cttggggtgatctttcttcaa 276  Q
    ||| ||  |||||||||||||    
T  18562650 ctttggaggatctttcttcaa 18562670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 24 - 375
Target Start/End: Complemental strand, 9977 - 9626
Alignment:
Q  24 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc 123  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||| |||||||||||||||||||| ||    
T  9977 tcattgaagtatctggtttttcaaagactgcatgttgctcttctacgcaaccgttattcatgacataataacatagtggcttgtgaattgccatttcgtc 9878  T
Q  124 gacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagat 223  Q
    ||||||||||||||| ||||| ||||||| | | ||||||||||||||||| |||| |||||||||||||||||| |||||||||||||| |||||||||    
T  9877 gacgaaatcactttcaacttcgttaatttctgattgaacgtcgtattccacaggtaggatagaaaccacattgcatactatgtcgagactagggtcagat 9778  T
Q  224 ccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaacca 323  Q
    ||||||||||| |||||||||||||||||||| ||||| || |||||||| || ||||||||| |||| |||||||||||| ||||||| || |||||||    
T  9777 ccagtgaaatttgaagtcatttcttcatcctctttgggatgttctttctttaaaattgacaatgggggtgagattctctctgttgctggctttttaacca 9678  T
Q  324 tttcgaacacaactttctgcttaccctctgttgtctcaacattgatgatgtc 375  Q
    ||||||||||| |||||||||||||||||  | | ||||||||| |||||||    
T  9677 tttcgaacacagctttctgcttaccctctcctttgtcaacattggtgatgtc 9626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 24 - 375
Target Start/End: Original strand, 17422711 - 17423062
Alignment:
Q  24 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc 123  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||| ||||||| ||||||||  |||||||||||||    
T  17422711 tcatcgaagtttctggtttttcgaagactgcatgttgctcttctacacaaccattattcatgacataagagcatagtggcttgtgggttgccatttcatc 17422810  T
Q  124 gacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagat 223  Q
    ||||||||||||||||||||  ||||||| | |||| || ||||||||||| |||| |||||||||||||||||| ||||||||||| || |||||||||    
T  17422811 gacgaaatcactttccactttgttaatttctgactggacatcgtattccacaggtaggatagaaaccacattgcaaactatgtcgaggctcgggtcagat 17422910  T
Q  224 ccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaacca 323  Q
    || |||||||| |||||||| || |||||||| ||||| |||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||    
T  17422911 cccgtgaaattcgaagtcatctcctcatcctctttgggatgatctttcttcaagattgacaatgggggtgagattctctctgttgctggtttcttaacca 17423010  T
Q  324 tttcgaacacaactttctgcttaccctctgttgtctcaacattgatgatgtc 375  Q
    ||||||||||  ||||||||||| |||| ||| | ||||||||| |||||||    
T  17423011 tttcgaacacctctttctgcttatcctccgttttgtcaacattggtgatgtc 17423062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 24 - 345
Target Start/End: Original strand, 22348621 - 22348942
Alignment:
Q  24 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc 123  Q
    |||| ||||| ||||||||||||||||| |||||||| || ||||||||||| |||||||| | |||||||||||| ||||||||| |||||||||| ||    
T  22348621 tcattgaagtatctggtttttcaaagacagcatgttgttcctctacacaaccattattcataacataatagcatagtggcttgtgagttgccatttcgtc 22348720  T
Q  124 gacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagat 223  Q
    |||||| |||||||| ||||| |||| || | ||||||||||||||| ||| |||| ||| |||||||||||||| || || || |||||||||||||||    
T  22348721 gacgaagtcactttcaacttcattaacttctgactgaacgtcgtatttcacaggtaggatcgaaaccacattgcatacgatatcaagactggggtcagat 22348820  T
Q  224 ccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaacca 323  Q
    ||| ||||||| |||||||||||||||||||| ||||| ||||||||||| || ||||||||| |||| ||||||||||||||||||||||| |||||||    
T  22348821 ccaatgaaatttgaagtcatttcttcatcctctttgggatgatctttctttaaaattgacaatgggggtgagattctctctattgctggttttttaacca 22348920  T
Q  324 tttcgaacacaactttctgctt 345  Q
    ||||||||||||||||||||||    
T  22348921 tttcgaacacaactttctgctt 22348942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 24 - 342
Target Start/End: Complemental strand, 1735635 - 1735317
Alignment:
Q  24 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc 123  Q
    |||||||| | ||||| || || || || |||||||| ||||| ||||| || |||||||||| |||||||||||| || |||||| ||||||| |||||    
T  1735635 tcatcgaaatatctggcttctcgaaaaccgcatgttgttcttccacacagccattattcatgacataatagcatagtggtttgtgagttgccatctcatc 1735536  T
Q  124 gacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagat 223  Q
    |||||| |||||||| ||||| ||||| | | |||| || ||||||||||| || ||||| ||||||||||| || |||||||| ||||| |||||||||    
T  1735535 gacgaagtcactttcgacttcattaatatctgactggacatcgtattccacaggcaagatggaaaccacattacagactatgtcaagacttgggtcagat 1735436  T
Q  224 ccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaacca 323  Q
     | |||||||| |||||||| || || || || || |  |||||||||||||  ||||||||| |||| || ||||  ||| ||||||| ||||||||||    
T  1735435 tccgtgaaatttgaagtcatctcctcgtcttcttttgaatgatctttcttcagaattgacaatgggggtgaaattcgttctgttgctggcttcttaacca 1735336  T
Q  324 tttcgaacacaactttctg 342  Q
    | ||||||||| |||||||    
T  1735335 tctcgaacacagctttctg 1735317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 35 - 326
Target Start/End: Complemental strand, 22068088 - 22067798
Alignment:
Q  35 tctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcgacgaaatcac 134  Q
    |||||| ||||||| || ||||| |||||||| ||||| || || ||||||| |||||||||||  ||||| || || |||||||  |||| ||| ||||    
T  22068088 tctggtctttcaaaaacggcatgctgctcttcaacacagccattgttcatgacataatagcataatggcttatggatggccattttgtcgatgaagtcac 22067989  T
Q  135 tttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagatccagtgaaatt 234  Q
    |||| ||||| |||| ||   ||||||||||||||||||| || || |  || ||||||||||||||||| |||||||| ||||||||||||||||||||    
T  22067988 tttcaacttcattaacttccgactgaacgtcgtattccacaggaaaaactgacaccacattgcacactatatcgagact-gggtcagatccagtgaaatt 22067890  T
Q  235 ggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaaccattt 326  Q
     ||||||||||||||||||||||| || ||| || ||||||| ||||| ||  | || |||||||| || || ||||| || ||||||||||    
T  22067889 cgaagtcatttcttcatcctccttaggatgacctctcttcaaaattgataagggaggggagattctttccatggctggctttttaaccattt 22067798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 24 - 352
Target Start/End: Complemental strand, 10151125 - 10150797
Alignment:
Q  24 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc 123  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||    
T  10151125 tcatcgaagtgtctgatttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatc 10151026  T
Q  124 gacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagat 223  Q
    || |||||||||||| ||||| ||||||| | || ||||||| |||||||| ||||  ||||||||||||||||| |||||||| |||||||||||||||    
T  10151025 gatgaaatcactttcaacttcattaatttctgacggaacgtcatattccacaggtagtatagaaaccacattgcatactatgtcaagactggggtcagat 10150926  T
Q  224 ccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaacca 323  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||||||||| ||||||||| |||| |||||||||||| |  ||||||| |||||||    
T  10150925 ccagtgaaatttgaagtcatttcttcatcctctttgggatgatctttcttcaaaattgacaatgggggtgagattctctctgtgactggttttttaacca 10150826  T
Q  324 tttcgaacacaactttctgcttaccctct 352  Q
    ||||||||||| ||||  |||| ||||||    
T  10150825 tttcgaacacatcttttcgcttgccctct 10150797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 85 - 355
Target Start/End: Original strand, 13306794 - 13307064
Alignment:
Q  85 gaaataatagcatagcggcttgtgaattgccatttcatcgacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagata 184  Q
    |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||||||| | ||||||| |||||||||||||||| ||||    
T  13306794 gaaataatagcacagtggcttgtgagttgccatttcatcgacgaaatcactttcaacttcgttaatttctaactgaacatcgtattccaccggtaggata 13306893  T
Q  185 gaaaccacattgcacactatgtcgagactggggtcagatccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgaca 284  Q
    |||||||||||||| ||||| |||||||| ||||||||||| |||||||| |||||||| ||||||||||| ||||| |||||||||||||| |||||||    
T  13306894 gaaaccacattgcaaactatatcgagactagggtcagatcccgtgaaattcgaagtcatatcttcatcctctttgggatgatctttcttcaaaattgaca 13306993  T
Q  285 ataggggcgagattctctctattgctggtttcttaaccatttcgaacacaactttctgcttaccctctgtt 355  Q
    || |||| |||||||||||| |||||||||||||||||||||||||||||  |||||||||| ||| ||||    
T  13306994 atgggggtgagattctctctgttgctggtttcttaaccatttcgaacacagttttctgcttatcctgtgtt 13307064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 26 - 375
Target Start/End: Original strand, 14693085 - 14693434
Alignment:
Q  26 atcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcga 125  Q
    |||||| | |||||||| || || || |||||||| ||||| ||||| || |||||||||| |||||||||||| ||||||||| || ||||||||||||    
T  14693085 atcgaaatatctggtttctcgaaaaccgcatgttgttcttccacacagccattattcatgacataatagcatagtggcttgtgagtttccatttcatcga 14693184  T
Q  126 cgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagatcc 225  Q
    |||| ||| |||| ||||| ||||||| | |||| || ||||||||||| || |||||||||||||||||||| |||||||||||  | ||||||||| |    
T  14693185 cgaagtcaatttcaacttcattaatttctgactggacatcgtattccacaggcaagatagaaaccacattgcaaactatgtcgaggtttgggtcagattc 14693284  T
Q  226 agtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaaccatt 325  Q
     |||||||| |||||||| || | |||||| ||||  || ||||||||||||||||||||| |||| || ||||||||| |||||||||| |||||||||    
T  14693285 cgtgaaatttgaagtcatctccttatcctctttggaatggtctttcttcaagattgacaatgggggtgaaattctctctgttgctggttttttaaccatt 14693384  T
Q  326 tcgaacacaactttctgcttaccctctgttgtctcaacattgatgatgtc 375  Q
    ||||||||  ||||||||||  |||| ||| | |||| |||| |||||||    
T  14693385 tcgaacacggctttctgcttgtcctccgttttgtcaatattggtgatgtc 14693434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 35 - 351
Target Start/End: Original strand, 7401854 - 7402170
Alignment:
Q  35 tctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcgacgaaatcac 134  Q
    ||||| || ||||| || |||||||| ||||| || || || |||||||||| |||||||||||| |||||||||||||||||||||||||| || ||||    
T  7401854 tctggcttctcaaaaaccgcatgttgttcttccacgcagccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacaaagtcac 7401953  T
Q  135 tttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagatccagtgaaatt 234  Q
    |||||||||| ||||| | | |||| || ||||||||| | || | ||| |||||||||||||| |||||||||||||| |||||| || | ||||||||    
T  7401954 tttccacttcattaatctctgactggacatcgtattcctcaggcaggattgaaaccacattgcaaactatgtcgagactcgggtcacattccgtgaaatt 7402053  T
Q  235 ggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaaccatttcgaacaca 334  Q
     |||||||| || |||||||| ||||    ||  |||||||| ||||||||| |||| || ||||| ||| ||||||  |||||||||||||||||||||    
T  7402054 tgaagtcatctcctcatcctctttggaacaatacttcttcaaaattgacaatgggggtgaaattctttctgttgctgccttcttaaccatttcgaacaca 7402153  T
Q  335 actttctgcttaccctc 351  Q
     ||||||| ||| ||||    
T  7402154 gctttctgtttatcctc 7402170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 24 - 345
Target Start/End: Complemental strand, 10782494 - 10782173
Alignment:
Q  24 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc 123  Q
    |||||||| | ||||| || || || || |||||||| ||||| |||||  | |||||||||| ||||||||| || || |||||| ||||||| |||||    
T  10782494 tcatcgaaatatctggcttctcgaaaaccgcatgttgttcttccacacagtcattattcatgacataatagcacagtggtttgtgagttgccatctcatc 10782395  T
Q  124 gacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagat 223  Q
    ||| |||||||||||  |||| ||||||| | |||| || || |||||||| || || || ||||||||||| || |||||||| ||||| |||||||||    
T  10782394 gacaaaatcactttcggcttcattaatttctgactggacatcatattccacaggcaaaatggaaaccacattacaaactatgtcaagacttgggtcagat 10782295  T
Q  224 ccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaacca 323  Q
     | |||||||| ||||||||||| ||||| || || || ||||||||| |||  || |||||| ||||||| |||| |||| ||||||| ||||||||||    
T  10782294 tctgtgaaattcgaagtcatttcctcatcttcttttggatgatctttcatcagaatcgacaatgggggcgaaattcgctctgttgctggcttcttaacca 10782195  T
Q  324 tttcgaacacaactttctgctt 345  Q
    | || |||||| ||||||||||    
T  10782194 tctcaaacacagctttctgctt 10782173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 35 - 150
Target Start/End: Original strand, 7365311 - 7365426
Alignment:
Q  35 tctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcgacgaaatcac 134  Q
    ||||| || ||||| || |||||||| ||||| || || || |||||||||| |||||||||||| |||||||||||||||||||||||||| || ||||    
T  7365311 tctggcttctcaaaaaccgcatgttgttcttccacgcagccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacaaagtcac 7365410  T
Q  135 tttccacttccttaat 150  Q
    |||||||||| |||||    
T  7365411 tttccacttcattaat 7365426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 24 - 375
Target Start/End: Complemental strand, 29959 - 29608
Alignment:
Q  24 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc 123  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||| |||| |||||||||| |||||||||||| |||||||||||| ||||||||||    
T  29959 tcatcgaagtgtctggtttttctaagactgcatgatgctcttctacataaccattattcatgacataatagcatagtggcttgtgaatttccatttcatc 29860  T
Q  124 gacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagat 223  Q
    ||||||||||||||| ||||| ||||||| | ||||||||||||||||||| |||| |||||||||||||||||| |||||||| || ||||||||||||    
T  29859 gacgaaatcactttcaacttcattaatttctgactgaacgtcgtattccactggtaggatagaaaccacattgcatactatgtctaggctggggtcagat 29760  T
Q  224 ccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaacca 323  Q
    || |||||||  || ||||||||||||||||| ||||| |||||||||||||| ||||||||  |||| |||||||||||||| |||||||| |||||||    
T  29759 ccggtgaaatctgaggtcatttcttcatcctctttgggatgatctttcttcaaaattgacaacgggggtgagattctctctatggctggttttttaacca 29660  T
Q  324 tttcgaacacaactttctgcttaccctctgttgtctcaacattgatgatgtc 375  Q
    ||||||||||| |||| ||||| |||| | || | |||| |||| |||||||    
T  29659 tttcgaacacatctttttgcttgccctttcttttgtcaatattggtgatgtc 29608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 186; Significance: 1e-100; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 24 - 345
Target Start/End: Complemental strand, 21511327 - 21511006
Alignment:
Q  24 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc 123  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||| ||  ||||||||||| ||||||||| |||||||||| ||    
T  21511327 tcatcgaagtgtctggtttttcaaagacggcatgttgttcttctacacaaccattattcacgacgtaatagcatagtggcttgtgagttgccatttcgtc 21511228  T
Q  124 gacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagat 223  Q
    ||| ||||||||||||||||| |||| ||   |||||||||||||||||||  ||||||| || ||||||||||| |  || || |||||||||||||||    
T  21511227 gacaaaatcactttccacttcgttaacttccaactgaacgtcgtattccacaagtaagatcgagaccacattgcatatgatatcaagactggggtcagat 21511128  T
Q  224 ccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaacca 323  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||| |||| |||||||||||| |||||||||| |||||||    
T  21511127 ccagtgaaatttgaagtcatttcttcatcctccttgggatgatctttctttaaaattgacaatgggggtgagattctctctgttgctggttttttaacca 21511028  T
Q  324 tttcgaacacaactttctgctt 345  Q
    ||||||||||  ||||||||||    
T  21511027 tttcgaacaccgctttctgctt 21511006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 174; Significance: 2e-93; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 26 - 375
Target Start/End: Complemental strand, 26543 - 26194
Alignment:
Q  26 atcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcga 125  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||| |||||| ||||| || |||||| || ||||||| ||||    
T  26543 atcgaagtgtctggtttttcaaatactgcatgttgctcttccacacatccgttattcatgacataataacatagtggtttgtgagtttccatttcgtcga 26444  T
Q  126 cgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagatcc 225  Q
    ||||||||||||| ||||| ||||||| | | |||||||| |||||||| |||| ||| || ||||| ||||| |||||||||||||| |||||||||||    
T  26443 cgaaatcactttcgacttcgttaatttctgattgaacgtcatattccacaggtaggatggacaccacgttgcatactatgtcgagactagggtcagatcc 26344  T
Q  226 agtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaaccatt 325  Q
    ||||||||| |||||||| ||||||||||||||| |    ||||||||||| ||||||||| |||| |||||||||||| ||||||| || |||||||||    
T  26343 agtgaaattcgaagtcatctcttcatcctccttgagagagtctttcttcaaaattgacaatgggggtgagattctctctgttgctggctttttaaccatt 26244  T
Q  326 tcgaacacaactttctgcttaccctctgttgtctcaacattgatgatgtc 375  Q
    ||||||||| ||||||| ||| |||||  | | ||||||||| |||||||    
T  26243 tcgaacacagctttctgtttatcctctcctttgtcaacattggtgatgtc 26194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 171; Significance: 1e-91; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 24 - 342
Target Start/End: Complemental strand, 67306 - 66988
Alignment:
Q  24 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc 123  Q
    ||||||||| ||||||||||||||||||  ||||||| |||||||||||||| |||||||||| |||||| ||||| ||||||||  |||||||||| ||    
T  67306 tcatcgaagcgtctggtttttcaaagacaacatgttgttcttctacacaaccattattcatgacataataacatagtggcttgtgtgttgccatttcgtc 67207  T
Q  124 gacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagat 223  Q
    |||||| |||||||| ||||| |||| || | ||||||||||||||||||| |||| ||| || ||||||||||| ||||| ||||||||||||||||||    
T  67206 gacgaagtcactttcaacttcattaacttctgactgaacgtcgtattccacaggtaggattgagaccacattgcatactatatcgagactggggtcagat 67107  T
Q  224 ccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaacca 323  Q
    ||||||||||| |||||||||||||||||||| ||||| ||||||||||| |  ||||||||| |||| |||||||||||| |||||||||| | |||||    
T  67106 ccagtgaaatttgaagtcatttcttcatcctctttgggatgatctttctttagaattgacaatgggggtgagattctctctgttgctggtttttaaacca 67007  T
Q  324 tttcgaacacaactttctg 342  Q
    |||| || |||||| ||||    
T  67006 tttcaaatacaactctctg 66988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 170; Significance: 4e-91; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 24 - 345
Target Start/End: Original strand, 5395 - 5716
Alignment:
Q  24 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc 123  Q
    ||||||| | |||||||||||||||||| |||||||| |||||||||||||| |||||||||| |||||| ||||| ||||||||  |||||||||| ||    
T  5395 tcatcgaggcgtctggtttttcaaagacagcatgttgttcttctacacaaccattattcatgacataataacatagtggcttgtgtgttgccatttcgtc 5494  T
Q  124 gacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagat 223  Q
    |||||| |||||||| ||||| |||| || | ||||||||||||||||||| ||||  || || ||||||||||| ||||| ||||||||||||||||||    
T  5495 gacgaagtcactttcaacttcattaacttctgactgaacgtcgtattccacaggtagaattgagaccacattgcatactatatcgagactggggtcagat 5594  T
Q  224 ccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaacca 323  Q
    ||||||||||| |||||||||||||||||||| ||||| ||||||||||| |  ||||||||| |||| |||||||||||| |||||||||| | |||||    
T  5595 ccagtgaaatttgaagtcatttcttcatcctctttgggatgatctttctttagaattgacaatgggggtgagattctctctgttgctggtttttaaacca 5694  T
Q  324 tttcgaacacaactttctgctt 345  Q
    |||| || |||||| |||||||    
T  5695 tttcaaatacaactctctgctt 5716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 24 - 342
Target Start/End: Complemental strand, 11811 - 11493
Alignment:
Q  24 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc 123  Q
    |||| ||||| |||||||||||||| || |||||||| |||||||||||||| |||||||||| |||||||||||| ||||||||| |||||||||| ||    
T  11811 tcattgaagtatctggtttttcaaacacagcatgttgttcttctacacaaccattattcatgacataatagcatagtggcttgtgagttgccatttcgtc 11712  T
Q  124 gacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagat 223  Q
     ||||| |||||||| ||||| |||| ||   ||||||||||||||||||| |||| ||| || ||||||||||| || || || |||||||||||||||    
T  11711 aacgaagtcactttcaacttcattaacttccgactgaacgtcgtattccacaggtaggattgagaccacattgcatacgatatcaagactggggtcagat 11612  T
Q  224 ccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaacca 323  Q
    ||||||||||| |||||||||||||||||||| ||||| ||||||||||| |  ||||||||| |||| |||||||||||| |||||||||| |||||||    
T  11611 ccagtgaaatttgaagtcatttcttcatcctctttgggatgatctttctttataattgacaatgggggtgagattctctctgttgctggttttttaacca 11512  T
Q  324 tttcgaacacaactttctg 342  Q
    ||||||| ||| |||||||    
T  11511 tttcgaatacagctttctg 11493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 165; Significance: 4e-88; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 24 - 352
Target Start/End: Original strand, 37450 - 37778
Alignment:
Q  24 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc 123  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||| || |||||||||| |||||| ||||| || |||||| | |||||||| ||    
T  37450 tcatcgaagtgtctggtttttcaaatactgcatgttgctcttccacacatccattattcatgacataataacatagtggtttgtgagtagccatttcgtc 37549  T
Q  124 gacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagat 223  Q
    ||||||||||||||| ||||| ||||||| | | |||||||| |||||||| |||| |||||| ||||| || || |||||||||||||| |||||||||    
T  37550 gacgaaatcactttcgacttcgttaatttctgattgaacgtcatattccacaggtaggatagacaccacgttacatactatgtcgagactagggtcagat 37649  T
Q  224 ccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaacca 323  Q
    ||||||||||| |||||||| |||||||||||||||||    ||||||||||| ||||||||| |||| || ||||||| | ||||||| || |||||||    
T  37650 ccagtgaaattcgaagtcatatcttcatcctccttgggaaagtctttcttcaaaattgacaatgggggtgaaattctctatgttgctggctttttaacca 37749  T
Q  324 tttcgaacacaactttctgcttaccctct 352  Q
    ||||||||||| ||||||| ||| |||||    
T  37750 tttcgaacacagctttctgtttaacctct 37778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 158; Significance: 5e-84; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 24 - 345
Target Start/End: Original strand, 138830 - 139151
Alignment:
Q  24 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc 123  Q
    |||||||||||||||| ||||||||||| |||||||| |||||||||||||  |||||||||| |||||| ||||| ||||||||  | |||||||| ||    
T  138830 tcatcgaagtgtctggcttttcaaagacagcatgttgttcttctacacaactattattcatgacataataacatagtggcttgtgtgtcgccatttcgtc 138929  T
Q  124 gacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagat 223  Q
    |||||| |||||||| ||||| |||| || | |||||||||||||||| || |||| ||| |||||||||||||| |||||||||||||| ||||||||     
T  138930 gacgaagtcactttcaacttcattaacttctgactgaacgtcgtattctacaggtaggattgaaaccacattgcatactatgtcgagactagggtcagac 139029  T
Q  224 ccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaacca 323  Q
    ||||||||||| |||||||||||||||||||| ||||| || |||||||| |||||||||||  | || ||||| |||| | |||||||||| |||||||    
T  139030 ccagtgaaattcgaagtcatttcttcatcctctttgggatggtctttctttaagattgacaagggaggtgagatcctctttgttgctggttttttaacca 139129  T
Q  324 tttcgaacacaactttctgctt 345  Q
    ||||||| ||| || |||||||    
T  139130 tttcgaatacagctctctgctt 139151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 155; Significance: 3e-82; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 24 - 350
Target Start/End: Original strand, 126617 - 126943
Alignment:
Q  24 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc 123  Q
    |||| ||||| |||||||||||||| || || ||||| |||||||||||||| |||||||||| |||||||||||| ||||||||| |||||||||| ||    
T  126617 tcattgaagtatctggtttttcaaatacggcgtgttgttcttctacacaaccattattcatgacataatagcatagtggcttgtgagttgccatttcgtc 126716  T
Q  124 gacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagat 223  Q
    || ||| |||||||| ||||| |||| ||   ||| ||||||||||||||| |||| ||| || ||||||||||| || || || |||||||||||||||    
T  126717 gatgaagtcactttcaacttcgttaacttccgactaaacgtcgtattccacaggtaggatcgagaccacattgcatacgatatcaagactggggtcagat 126816  T
Q  224 ccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaacca 323  Q
    || |||||||| |||||||||||||||||||| ||||| ||||||||||| || ||| ||||| |||| |||||||||||| ||| |||||| |||||||    
T  126817 cccgtgaaatttgaagtcatttcttcatcctcattgggatgatctttctttaaaattcacaatgggggtgagattctctctgttgttggttttttaacca 126916  T
Q  324 tttcgaacacaactttctgcttaccct 350  Q
    ||||||||||  |||||||||| ||||    
T  126917 tttcgaacaccgctttctgctttccct 126943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0656 (Bit Score: 151; Significance: 8e-80; HSPs: 1)
Name: scaffold0656
Description:

Target: scaffold0656; HSP #1
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 24 - 330
Target Start/End: Complemental strand, 5378 - 5072
Alignment:
Q  24 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc 123  Q
    |||||||||  ||||||||||||||||| |||||||| ||||| |||||||| |||||||||| |||||| ||||| ||||| ||  | |||||||| ||    
T  5378 tcatcgaagcatctggtttttcaaagacagcatgttgttcttccacacaaccattattcatgacataataacatagtggcttatgcgtagccatttcgtc 5279  T
Q  124 gacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagat 223  Q
     ||||| |||||||| ||||| |||| || | || |||||||||||||||| ||||  || || ||||||||||| ||||||||||||||| ||||||||    
T  5278 aacgaagtcactttcaacttcattaacttctgacagaacgtcgtattccacaggtagaattgataccacattgcatactatgtcgagactgaggtcagat 5179  T
Q  224 ccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaacca 323  Q
    ||||||||||| |||||||||||||||||||||||||| || |||||||| |||||||||||  |||| |||||||||||| ||||||| || |||||||    
T  5178 ccagtgaaattcgaagtcatttcttcatcctccttgggatggtctttctttaagattgacaaggggggtgagattctctctgttgctggctttttaacca 5079  T
Q  324 tttcgaa 330  Q
    |||||||    
T  5078 tttcgaa 5072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 151; Significance: 8e-80; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 47 - 345
Target Start/End: Original strand, 22805718 - 22806016
Alignment:
Q  47 aagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcgacgaaatcactttccacttcct 146  Q
    ||||| |||||||| |||||||||||||| |||||||||| |||||| ||||| ||||||||  |||||||||| |||||||  |||||||| ||||| |    
T  22805718 aagacagcatgttgttcttctacacaaccattattcatgacataataacatagtggcttgtgtgttgccatttcgtcgacgatgtcactttcaacttcat 22805817  T
Q  147 taatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagatccagtgaaattggaagtcatttc 246  Q
    ||| || | ||||||||||||||||||| |||| ||| || ||||||||||| ||||| |||||| |||||||||||||||||||||| |||||||||||    
T  22805818 taacttctgactgaacgtcgtattccacaggtaggattgagaccacattgcatactatatcgagattggggtcagatccagtgaaatttgaagtcatttc 22805917  T
Q  247 ttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaaccatttcgaacacaactttctgctt 345  Q
    ||||||||| ||||| ||||||||||| |  ||||||||| |||| |||||||||||| |||||||||| ||||||||||| || ||| || |||||||    
T  22805918 ttcatcctctttgggatgatctttctttagaattgacaatgggggtgagattctctctgttgctggttttttaaccatttcaaatacagctctctgctt 22806016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 24 - 183
Target Start/End: Original strand, 41380255 - 41380414
Alignment:
Q  24 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc 123  Q
    |||||||| | ||||| ||||| || || |||||||| ||||| ||||| || |||||||||| ||||||||| || || |||||| ||||||| |||||    
T  41380255 tcatcgaaatatctggcttttcgaaaaccgcatgttgttcttccacacagccattattcatgacataatagcacagtggtttgtgagttgccatctcatc 41380354  T
Q  124 gacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagat 183  Q
    |||||| |||||||| ||||| ||||||| | |||| || ||||||||||| || |||||    
T  41380355 gacgaagtcactttcgacttcattaatttttgactggacatcgtattccacaggcaagat 41380414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 263 - 351
Target Start/End: Original strand, 41380419 - 41380507
Alignment:
Q  263 tgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaaccatttcgaacacaactttctgcttaccctc 351  Q
    |||||||||||||| ||||||||| |||| || |||| |||| ||||||| ||||||||||| ||||||||| |||||||||| |||||    
T  41380419 tgatctttcttcaaaattgacaatgggggtgaaattcgctctgttgctggcttcttaaccatctcgaacacagctttctgcttgccctc 41380507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 24 - 204
Target Start/End: Complemental strand, 69781 - 69601
Alignment:
Q  24 tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatc 123  Q
    |||||||||| ||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||| | |  ||||||||| |||||||||||||    
T  69781 tcatcgaagtatctggtttttcgaagactggatgttgctcttctacacaaccattattcatgacataatagtacaatggcttgtgagttgccatttcatc 69682  T
Q  124 gacgaaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactat 204  Q
    ||||||||||||||||||||| ||||||| | ||||||| ||||||||||  ||||  ||||||||||||||||| |||||    
T  69681 gacgaaatcactttccacttcgttaatttctgactgaacatcgtattccataggtagtatagaaaccacattgcaaactat 69601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 35 - 330
Target Start/End: Complemental strand, 14766 - 14471
Alignment:
Q  35 tctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcgacgaaatcac 134  Q
    |||||| |||||||||| |||||||| || || ||||| || || ||||||| |||||||||||  ||||| ||  | |||||||| |||| ||| ||||    
T  14766 tctggtctttcaaagacagcatgttgttcctcaacacagccattgttcatgacataatagcataatggcttatgggtggccatttcgtcgatgaagtcac 14667  T
Q  135 tttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagatccagtgaaatt 234  Q
    |||| ||||| |||| || | ||||||||||||||||||| || || |  || || |||||||| | ||| ||||||||||||| |||||||||||||||    
T  14666 tttcaacttcattaacttctgactgaacgtcgtattccacaggcaaaactgacacgacattgcatattatatcgagactggggttagatccagtgaaatt 14567  T
Q  235 ggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaaccatttcgaa 330  Q
     ||||||||||||||||||||||| || |||||| ||||||| ||||| ||  | || |||||||| ||  | |||||||| ||||||||||||||    
T  14566 cgaagtcatttcttcatcctccttaggatgatctctcttcaaaattgataagggaggggagattctttccgtggctggttttttaaccatttcgaa 14471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 35 - 282
Target Start/End: Complemental strand, 33874 - 33627
Alignment:
Q  35 tctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcgacgaaatcac 134  Q
    ||||||| |||||| || |||||||| ||||| ||||| || || ||||||| |||||||||||  ||||| ||  | |||||||| |||  ||| ||||    
T  33874 tctggttattcaaaaacagcatgttgttcttcaacacagccattgttcatgacataatagcataatggcttatgtgtcgccatttcgtcggtgaagtcac 33775  T
Q  135 tttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagatccagtgaaatt 234  Q
    |||| ||||| |||| ||   ||||||| ||||||||||| || || |  || ||||||||||||||||||||||||||||||||||||||| |||||||    
T  33774 tttcaacttcattaactttcgactgaacatcgtattccacaggcaaaactgacaccacattgcacactatgtcgagactggggtcagatccaatgaaatt 33675  T
Q  235 ggaagtcatttcttcatcctccttggggtgatctttcttcaagattga 282  Q
     |||||||||||||||||||| ||||| || |||||||||||||||||    
T  33674 cgaagtcatttcttcatcctctttgggatggtctttcttcaagattga 33627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 35 - 223
Target Start/End: Complemental strand, 4461 - 4273
Alignment:
Q  35 tctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcgacgaaatcac 134  Q
    ||||| ||||||||||| |||||||| |||||||||||||| |||||||||| |||||| ||||| ||||||||  |||||||||| || ||||| ||||    
T  4461 tctggcttttcaaagacagcatgttgttcttctacacaaccattattcatgacataataacatagtggcttgtgtgttgccatttcgtcaacgaagtcac 4362  T
Q  135 tttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagat 223  Q
    |||| ||||| |||| || | | ||||| |||||||||||  ||| ||| || ||| ||||||| ||||||||||||||||||||||||    
T  4361 tttcaacttcattaacttctgattgaacttcgtattccacatgtaggattgataccgcattgcatactatgtcgagactggggtcagat 4273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 218 - 345
Target Start/End: Complemental strand, 2001 - 1874
Alignment:
Q  218 tcagatccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttct 317  Q
    ||||| ||||||||||| ||||||||||||||||||| |||||| || |||||||| |||||||||||  |||| |||||||||||| |||||||||| |    
T  2001 tcagacccagtgaaattcgaagtcatttcttcatcctacttgggatggtctttctttaagattgacaaggggggtgagattctctctgttgctggttttt 1902  T
Q  318 taaccatttcgaacacaactttctgctt 345  Q
    ||||||||||||| ||| || |||||||    
T  1901 taaccatttcgaaaacagctctctgctt 1874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 188 - 345
Target Start/End: Original strand, 159086 - 159243
Alignment:
Q  188 accacattgcacactatgtcgagactggggtcagatccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattgacaata 287  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| || | ||||||||||||||| ||      
T  159086 accacattgcatactatgtcgagactagggtcagatccagtgaaattcgaagtcatttcttcatcctccttgggatggtttttcttcaagattgataagg 159185  T
Q  288 ggggcgagattctctctattgctggtttcttaaccatttcgaacacaactttctgctt 345  Q
    | || |||||||| ||| ||||||| || ||||||||||| || ||  ||||||||||    
T  159186 gcggtgagattctttctgttgctggctttttaaccatttcaaaaacggctttctgctt 159243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 237 - 345
Target Start/End: Complemental strand, 65376 - 65268
Alignment:
Q  237 aagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaaccatttcgaacacaac 336  Q
    ||||||||||||||||||| ||||| ||||||||||| || ||||||||| ||||  ||||||||||| |||||||||| ||||||||||||||||||||    
T  65376 aagtcatttcttcatcctctttgggatgatctttctttaaaattgacaatgggggttagattctctctgttgctggttttttaaccatttcgaacacaac 65277  T
Q  337 tttctgctt 345  Q
    |||||||||    
T  65276 tttctgctt 65268  T

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Target: scaffold0023; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 237 - 345
Target Start/End: Complemental strand, 74554 - 74446
Alignment:
Q  237 aagtcatttcttcatcctccttggggtgatctttcttcaagattgacaataggggcgagattctctctattgctggtttcttaaccatttcgaacacaac 336  Q
    ||||||||||||||||||| ||||| ||||||||||| || ||||||||| ||||  ||||||||||| |||||||||| ||||||||||||||||||||    
T  74554 aagtcatttcttcatcctctttgggatgatctttctttaaaattgacaatgggggttagattctctctgttgctggttttttaaccatttcgaacacaac 74455  T
Q  337 tttctgctt 345  Q
    |||||||||    
T  74454 tttctgctt 74446  T

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Target: scaffold0013 (Bit Score: 57; Significance: 1e-23; HSPs: 3)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 68 - 324
Target Start/End: Complemental strand, 75661 - 75405
Alignment:
Q  68 acacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcgacgaaatcactttccacttccttaatttattactgaacgtcgt 167  Q
    |||||||| || ||||| | |||||||||||| ||||| || || ||||||||||||   ||||||||||| ||||| ||||  | |||  ||||||| |    
T  75661 acacaaccattgttcataacataatagcatagtggcttatggatagccatttcatcggtaaaatcactttctacttcgttaacctcttaaggaacgtcat 75562  T
Q  168 attccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagatccagtgaaattggaagtcatttcttcatcctccttggggtgatc 267  Q
    |||| |  || || |  || ||||||||||| ||||| |||||||| | ||||||| | |||||||| || ||||||||||||||||| || || || ||    
T  75561 attcaataggcaatactgataccacattgcatactatatcgagacttgagtcagattctgtgaaatttgacgtcatttcttcatcctctttaggatggtc 75462  T
Q  268 tttcttcaagattgacaataggggcgagattctctctattgctggtttcttaaccat 324  Q
    ||||||||| ||||| ||  | || |||||||| ||  | |||||||| ||||||||    
T  75461 tttcttcaaaattgataaaggaggggagattctttccgtggctggttttttaaccat 75405  T

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Target: scaffold0013; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 53 - 282
Target Start/End: Complemental strand, 84105 - 83876
Alignment:
Q  53 gcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcgacgaaatcactttccacttccttaattt 152  Q
    |||||||| ||||  |||||||| || ||||| | |||||||||||| ||||| || || ||||||||||||   ||||||||||| ||||| ||||  |    
T  84105 gcatgttgatctttgacacaaccattgttcataacataatagcatagtggcttatggatagccatttcatcggtaaaatcactttctacttcgttaacct 84006  T
Q  153 attactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagatccagtgaaattggaagtcatttcttcatc 252  Q
     |||  ||||||| ||||| |  || || |  || ||||||||||| ||||| |||||||| ||||||||| | |||||||| || ||||||| ||||||    
T  84005 cttaaggaacgtcatattcaataggcaatactgataccacattgcatactatatcgagacttgggtcagattctgtgaaatttgacgtcattttttcatc 83906  T
Q  253 ctccttggggtgatctttcttcaagattga 282  Q
    ||| || |  || ||||||||||| |||||    
T  83905 ctctttagtatggtctttcttcaaaattga 83876  T

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Target: scaffold0013; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 53 - 282
Target Start/End: Complemental strand, 121777 - 121548
Alignment:
Q  53 gcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcgacgaaatcactttccacttccttaattt 152  Q
    |||||||| ||||  |||||||| || ||||| | |||||||||||| ||||| || || ||||||||||||   ||||||||||| ||||| ||||  |    
T  121777 gcatgttgatctttgacacaaccattgttcataacataatagcatagtggcttatggatagccatttcatcggtaaaatcactttctacttcgttaacct 121678  T
Q  153 attactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagatccagtgaaattggaagtcatttcttcatc 252  Q
     |||  ||||||| ||||| |  || || |  || ||||||||||| ||||| |||||||| ||||||||| | |||||||| || ||||||| ||||||    
T  121677 cttaaggaacgtcatattcaataggcaatactgataccacattgcatactatatcgagacttgggtcagattctgtgaaatttgacgtcattttttcatc 121578  T
Q  253 ctccttggggtgatctttcttcaagattga 282  Q
    ||| || |  || ||||||||||| |||||    
T  121577 ctctttagtatggtctttcttcaaaattga 121548  T

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Target: scaffold0053 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 188 - 282
Target Start/End: Original strand, 42285 - 42379
Alignment:
Q  188 accacattgcacactatgtcgagactggggtcagatccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaagattga 282  Q
    ||||||||||||||||| |||||||| || |||||| |||||||||| || |||||||||||||||||||| || |||| ||||||||| |||||    
T  42285 accacattgcacactatatcgagacttggatcagattcagtgaaattcgacgtcatttcttcatcctccttaggatgatttttcttcaaaattga 42379  T

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Target: scaffold0029 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 276
Target Start/End: Original strand, 48839 - 48987
Alignment:
Q  128 aaatcactttccacttccttaatttattactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactggggtcagatccag 227  Q
    ||||||||||||||||| ||||| | | |  ||||||| ||||| || || || |  || || ||||| || | |||||||||||| ||||||||| |||    
T  48839 aaatcactttccacttcgttaatgtctgaaggaacgtcatattcaacaggcaacactgacactacattacatagtatgtcgagacttgggtcagattcag 48938  T
Q  228 tgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaa 276  Q
     ||| || || |||||||||||||||||||| || ||||||||||||||    
T  48939 agaagttcgacgtcatttcttcatcctcctttggatgatctttcttcaa 48987  T

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Target: scaffold0407 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 276
Target Start/End: Original strand, 3034 - 3119
Alignment:
Q  191 acattgcacactatgtcgagactggggtcagatccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaa 276  Q
    |||||||| |||||||||||||| ||||||||  |||  || || || |||||||||||||| ||||| ||| | |||||||||||    
T  3034 acattgcatactatgtcgagacttgggtcagactcagaaaagtttgacgtcatttcttcatcatcctttgggaggtctttcttcaa 3119  T

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Target: scaffold0407; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 276
Target Start/End: Original strand, 9500 - 9585
Alignment:
Q  191 acattgcacactatgtcgagactggggtcagatccagtgaaattggaagtcatttcttcatcctccttggggtgatctttcttcaa 276  Q
    |||||||| |||||||||||||| ||||||||  |||  || || || |||||||||||||| ||||| ||| | |||||||||||    
T  9500 acattgcatactatgtcgagacttgggtcagactcagaaaagtttgacgtcatttcttcatcatcctttgggaggtctttcttcaa 9585  T

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Target: scaffold0008 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 138
Target Start/End: Original strand, 127000 - 127104
Alignment:
Q  34 gtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgaaataatagcatagcggcttgtgaattgccatttcatcgacgaaatca 133  Q
    ||||||| |||| || || || ||||| ||||| |||| ||| |||||||| | |||||||||||  ||||| ||||| |||||||||||   |||||||    
T  127000 gtctggtctttcgaatacggcgtgttgatcttcaacaccaccattattcataacataatagcataatggcttatgaatcgccatttcatcagtgaaatca 127099  T
Q  134 ctttc 138  Q
    |||||    
T  127100 ctttc 127104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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