View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0715_low_15 (Length: 373)

Name: NF0715_low_15
Description: NF0715
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0715_low_15
NF0715_low_15
[»] chr8 (37 HSPs)
chr8 (80-361)||(11056709-11056989)
chr8 (281-357)||(29973029-29973105)
chr8 (256-323)||(40728498-40728565)
chr8 (281-347)||(6864515-6864584)
chr8 (281-356)||(1470903-1470978)
chr8 (282-357)||(27728067-27728142)
chr8 (274-336)||(2698734-2698796)
chr8 (259-345)||(10727123-10727209)
chr8 (285-347)||(30600405-30600467)
chr8 (249-347)||(35869753-35869851)
chr8 (256-357)||(11415077-11415178)
chr8 (250-347)||(1664300-1664395)
chr8 (284-345)||(8799356-8799417)
chr8 (265-357)||(4558730-4558822)
chr8 (320-356)||(16210933-16210969)
chr8 (284-348)||(29699205-29699269)
chr8 (250-356)||(1666962-1667065)
chr8 (250-356)||(1889170-1889272)
chr8 (216-338)||(7026609-7026736)
chr8 (256-347)||(28769395-28769486)
chr8 (303-346)||(34213586-34213629)
chr8 (286-345)||(35453681-35453740)
chr8 (281-331)||(25867034-25867084)
chr8 (266-347)||(34173158-34173240)
chr8 (283-357)||(34770842-34770916)
chr8 (281-347)||(42597349-42597415)
chr8 (281-335)||(6875328-6875384)
chr8 (214-251)||(8194095-8194132)
chr8 (256-313)||(14482125-14482182)
chr8 (281-330)||(26215444-26215493)
chr8 (256-357)||(30013142-30013242)
chr8 (281-330)||(33209293-33209342)
chr8 (257-338)||(42508628-42508709)
chr8 (281-356)||(1892261-1892333)
chr8 (281-357)||(10075597-10075673)
chr8 (225-356)||(31884481-31884617)
chr8 (257-356)||(35298524-35298624)
[»] chr4 (55 HSPs)
chr4 (249-347)||(24929409-24929507)
chr4 (283-357)||(10192234-10192308)
chr4 (249-331)||(44319866-44319947)
chr4 (257-330)||(36734817-36734890)
chr4 (283-343)||(4071832-4071892)
chr4 (217-356)||(5219547-5219691)
chr4 (283-347)||(49085939-49086003)
chr4 (284-356)||(49219090-49219162)
chr4 (256-356)||(54325084-54325184)
chr4 (257-356)||(2980513-2980617)
chr4 (256-347)||(24160551-24160642)
chr4 (249-347)||(24443954-24444052)
chr4 (250-356)||(28581957-28582062)
chr4 (264-346)||(42321936-42322018)
chr4 (281-346)||(52735070-52735135)
chr4 (257-327)||(4191663-4191734)
chr4 (284-347)||(18628599-18628662)
chr4 (258-357)||(18630605-18630704)
chr4 (264-331)||(21952506-21952573)
chr4 (283-338)||(21953223-21953278)
chr4 (283-345)||(36722727-36722789)
chr4 (261-330)||(7749155-7749224)
chr4 (250-347)||(30207627-30207723)
chr4 (260-325)||(47970245-47970310)
chr4 (256-336)||(10173446-10173526)
chr4 (283-331)||(20936074-20936122)
chr4 (257-337)||(30024624-30024704)
chr4 (283-331)||(32724069-32724117)
chr4 (258-356)||(8422886-8422982)
chr4 (256-331)||(22684588-22684663)
chr4 (248-347)||(45128366-45128465)
chr4 (256-347)||(46796941-46797032)
chr4 (281-347)||(17884016-17884082)
chr4 (281-347)||(19691355-19691421)
chr4 (281-347)||(19701940-19702006)
chr4 (283-337)||(21593078-21593131)
chr4 (219-344)||(24193466-24193596)
chr4 (284-338)||(27623586-27623640)
chr4 (258-300)||(52645625-52645667)
chr4 (285-347)||(55870397-55870459)
chr4 (248-297)||(7205916-7205965)
chr4 (286-347)||(8130127-8130188)
chr4 (282-347)||(17223081-17223146)
chr4 (281-338)||(21952909-21952966)
chr4 (283-340)||(46013363-46013420)
chr4 (256-357)||(46415838-46415939)
chr4 (265-318)||(51044544-51044597)
chr4 (286-347)||(53626729-53626790)
chr4 (247-347)||(54414863-54414966)
chr4 (281-357)||(3175899-3175975)
chr4 (250-330)||(19422335-19422415)
chr4 (315-347)||(22471313-22471345)
chr4 (294-346)||(29194460-29194512)
chr4 (256-300)||(41050619-41050663)
chr4 (281-329)||(53155213-53155259)
[»] chr5 (31 HSPs)
chr5 (256-340)||(35135725-35135809)
chr5 (249-337)||(38766909-38766997)
chr5 (250-339)||(12407725-12407813)
chr5 (281-346)||(14295454-14295519)
chr5 (257-357)||(35960338-35960437)
chr5 (283-345)||(28586824-28586886)
chr5 (283-333)||(37063144-37063194)
chr5 (214-347)||(39257443-39257580)
chr5 (257-346)||(19177403-19177492)
chr5 (259-347)||(18704092-18704179)
chr5 (292-347)||(39750102-39750157)
chr5 (284-347)||(39823177-39823240)
chr5 (281-344)||(14599362-14599427)
chr5 (281-358)||(4855646-4855723)
chr5 (290-347)||(9634729-9634786)
chr5 (214-310)||(26516174-26516275)
chr5 (256-345)||(36539669-36539758)
chr5 (303-356)||(41277397-41277450)
chr5 (259-327)||(7096203-7096271)
chr5 (256-356)||(26516323-26516423)
chr5 (256-330)||(20982208-20982282)
chr5 (256-326)||(29014679-29014749)
chr5 (257-338)||(4991008-4991089)
chr5 (258-330)||(8985583-8985658)
chr5 (303-352)||(32059640-32059689)
chr5 (284-337)||(37386566-37386619)
chr5 (302-347)||(41016148-41016193)
chr5 (302-347)||(41017696-41017741)
chr5 (289-345)||(2933709-2933765)
chr5 (283-347)||(14331305-14331368)
chr5 (257-313)||(29115303-29115359)
[»] chr1 (53 HSPs)
chr1 (284-347)||(29007772-29007835)
chr1 (283-357)||(7218120-7218194)
chr1 (266-342)||(15360827-15360903)
chr1 (263-346)||(5756743-5756826)
chr1 (218-347)||(6933017-6933149)
chr1 (260-357)||(17269177-17269274)
chr1 (257-337)||(44032065-44032145)
chr1 (263-346)||(6074404-6074487)
chr1 (258-337)||(45107548-45107626)
chr1 (286-356)||(25006081-25006151)
chr1 (263-345)||(33186015-33186097)
chr1 (259-341)||(43333625-43333707)
chr1 (257-347)||(46980185-46980275)
chr1 (290-347)||(28467363-28467420)
chr1 (281-346)||(36151562-36151627)
chr1 (284-337)||(44936656-44936709)
chr1 (264-337)||(45999354-45999427)
chr1 (283-347)||(16322799-16322863)
chr1 (249-329)||(23895252-23895332)
chr1 (256-344)||(30259546-30259634)
chr1 (283-327)||(42351982-42352026)
chr1 (283-346)||(17420153-17420216)
chr1 (281-347)||(17422994-17423061)
chr1 (281-332)||(30815706-30815757)
chr1 (284-347)||(48830132-48830195)
chr1 (284-347)||(49517021-49517084)
chr1 (282-356)||(30285840-30285914)
chr1 (281-347)||(33527203-33527269)
chr1 (256-346)||(34380368-34380458)
chr1 (257-343)||(36602714-36602800)
chr1 (281-347)||(40304110-40304176)
chr1 (284-357)||(44940294-44940365)
chr1 (285-347)||(48064261-48064323)
chr1 (250-339)||(1393083-1393171)
chr1 (249-346)||(4200145-4200242)
chr1 (303-356)||(5150907-5150960)
chr1 (281-326)||(17631178-17631223)
chr1 (319-356)||(23902114-23902151)
chr1 (286-347)||(27738236-27738297)
chr1 (303-356)||(27887165-27887218)
chr1 (290-347)||(30371105-30371162)
chr1 (283-324)||(37175949-37175990)
chr1 (303-356)||(45205038-45205091)
chr1 (256-337)||(52286601-52286682)
chr1 (303-347)||(5592741-5592785)
chr1 (303-347)||(10581133-10581177)
chr1 (283-327)||(26184701-26184745)
chr1 (275-327)||(26293182-26293234)
chr1 (321-357)||(33976674-33976710)
chr1 (295-347)||(37272642-37272694)
chr1 (293-357)||(39348013-39348077)
chr1 (284-356)||(42556678-42556750)
chr1 (256-347)||(48282056-48282148)
[»] chr2 (44 HSPs)
chr2 (251-357)||(17952747-17952853)
chr2 (281-343)||(31740019-31740081)
chr2 (250-347)||(37053511-37053608)
chr2 (260-315)||(13864577-13864632)
chr2 (262-357)||(28933753-28933848)
chr2 (250-357)||(32694130-32694236)
chr2 (291-356)||(14666506-14666571)
chr2 (256-336)||(9478222-9478302)
chr2 (249-345)||(25609713-25609808)
chr2 (256-343)||(43431506-43431591)
chr2 (260-347)||(3673734-3673821)
chr2 (286-356)||(6988068-6988138)
chr2 (281-347)||(9878738-9878804)
chr2 (256-346)||(28803563-28803653)
chr2 (283-337)||(33192143-33192197)
chr2 (281-350)||(5133720-5133789)
chr2 (262-347)||(11344340-11344425)
chr2 (249-356)||(11513817-11513921)
chr2 (278-347)||(33942096-33942164)
chr2 (256-356)||(5867238-5867338)
chr2 (284-356)||(10143123-10143195)
chr2 (282-347)||(10769690-10769757)
chr2 (257-337)||(18962104-18962184)
chr2 (263-347)||(35755558-35755642)
chr2 (265-345)||(37474688-37474768)
chr2 (282-357)||(29300594-29300669)
chr2 (248-343)||(29430671-29430765)
chr2 (282-357)||(34054947-34055022)
chr2 (257-331)||(14209201-14209275)
chr2 (257-331)||(33267588-33267662)
chr2 (309-347)||(37276722-37276760)
chr2 (281-347)||(42907307-42907373)
chr2 (216-313)||(43456775-43456877)
chr2 (256-341)||(3423830-3423915)
chr2 (303-356)||(5043607-5043660)
chr2 (257-338)||(35329884-35329965)
chr2 (303-352)||(35539693-35539742)
chr2 (303-356)||(36863672-36863725)
chr2 (293-346)||(37292404-37292457)
chr2 (284-357)||(43199365-43199438)
chr2 (284-328)||(1939407-1939451)
chr2 (249-344)||(29503142-29503235)
chr2 (249-313)||(38239641-38239705)
chr2 (319-347)||(42621617-42621645)
[»] chr7 (41 HSPs)
chr7 (256-348)||(5373148-5373240)
chr7 (256-347)||(49060463-49060554)
chr7 (281-356)||(30456497-30456572)
chr7 (264-338)||(2894748-2894822)
chr7 (281-347)||(5006565-5006631)
chr7 (257-356)||(27481341-27481440)
chr7 (213-335)||(31341069-31341196)
chr7 (281-347)||(46081981-46082048)
chr7 (281-355)||(3802187-3802261)
chr7 (258-356)||(27492720-27492818)
chr7 (256-338)||(35536030-35536112)
chr7 (257-347)||(47004011-47004101)
chr7 (282-347)||(9527146-9527211)
chr7 (257-334)||(45593788-45593865)
chr7 (283-347)||(1417214-1417278)
chr7 (303-347)||(28340452-28340496)
chr7 (256-356)||(44241783-44241882)
chr7 (256-331)||(24975827-24975902)
chr7 (282-357)||(40689032-40689107)
chr7 (281-356)||(44910552-44910627)
chr7 (263-322)||(46223153-46223212)
chr7 (281-327)||(3241389-3241435)
chr7 (260-346)||(3610797-3610883)
chr7 (257-327)||(7244626-7244696)
chr7 (303-357)||(31338478-31338532)
chr7 (259-345)||(33894549-33894634)
chr7 (255-337)||(39551614-39551696)
chr7 (281-347)||(45813236-45813302)
chr7 (291-344)||(1413137-1413190)
chr7 (255-300)||(2223070-2223115)
chr7 (284-333)||(19624177-19624226)
chr7 (302-347)||(24895325-24895370)
chr7 (302-347)||(24909633-24909678)
chr7 (258-347)||(30496629-30496718)
chr7 (281-346)||(36874022-36874087)
chr7 (284-333)||(39591537-39591586)
chr7 (284-356)||(7623089-7623161)
chr7 (315-347)||(25507331-25507363)
chr7 (315-347)||(25558247-25558279)
chr7 (315-347)||(25558445-25558477)
chr7 (290-346)||(45777228-45777284)
[»] chr6 (32 HSPs)
chr6 (260-356)||(7354131-7354227)
chr6 (281-356)||(1402944-1403019)
chr6 (258-344)||(10452419-10452505)
chr6 (257-346)||(31420882-31420971)
chr6 (264-358)||(4006645-4006739)
chr6 (216-357)||(32975856-32976002)
chr6 (256-347)||(2514625-2514716)
chr6 (281-343)||(2027466-2027528)
chr6 (281-347)||(4247117-4247183)
chr6 (256-338)||(10032494-10032576)
chr6 (282-347)||(2117352-2117417)
chr6 (258-347)||(3204598-3204687)
chr6 (278-343)||(30865427-30865492)
chr6 (255-347)||(29274285-29274377)
chr6 (302-346)||(31828996-31829040)
chr6 (303-346)||(12757524-12757567)
chr6 (303-346)||(14656302-14656345)
chr6 (282-325)||(29957988-29958031)
chr6 (260-331)||(32513752-32513822)
chr6 (249-345)||(1810361-1810454)
chr6 (284-346)||(5328925-5328986)
chr6 (295-356)||(1497943-1498004)
chr6 (281-338)||(10154169-10154226)
chr6 (281-338)||(24782007-24782064)
chr6 (284-357)||(28660806-28660879)
chr6 (281-357)||(281894-281970)
chr6 (225-300)||(2023732-2023812)
chr6 (256-336)||(3169312-3169392)
chr6 (274-330)||(3171504-3171560)
chr6 (285-345)||(6310282-6310342)
chr6 (281-345)||(11363426-11363490)
chr6 (283-347)||(33787801-33787865)
[»] chr3 (37 HSPs)
chr3 (248-332)||(22232741-22232825)
chr3 (281-347)||(28306106-28306172)
chr3 (256-357)||(38462204-38462305)
chr3 (257-356)||(27792796-27792895)
chr3 (258-357)||(36646428-36646527)
chr3 (256-331)||(41028923-41028998)
chr3 (257-347)||(43116484-43116574)
chr3 (284-347)||(24235739-24235802)
chr3 (278-333)||(53736183-53736238)
chr3 (281-331)||(1395619-1395669)
chr3 (281-331)||(49586988-49587038)
chr3 (278-347)||(237342-237411)
chr3 (304-345)||(28779327-28779368)
chr3 (258-347)||(37788786-37788874)
chr3 (281-357)||(24887329-24887405)
chr3 (283-347)||(31337457-31337521)
chr3 (295-347)||(35364254-35364306)
chr3 (281-345)||(40122811-40122874)
chr3 (284-347)||(10101532-10101595)
chr3 (284-347)||(10212457-10212520)
chr3 (248-335)||(51278225-51278312)
chr3 (256-330)||(2070978-2071052)
chr3 (256-338)||(20349541-20349623)
chr3 (293-347)||(32555037-32555091)
chr3 (257-343)||(32703062-32703148)
chr3 (257-327)||(53457301-53457371)
chr3 (284-346)||(54775079-54775140)
chr3 (286-327)||(6241160-6241201)
chr3 (265-338)||(24605081-24605154)
chr3 (256-333)||(33307650-33307727)
chr3 (283-356)||(33405214-33405287)
chr3 (290-356)||(33965536-33965604)
chr3 (284-345)||(43038765-43038825)
chr3 (303-340)||(47131960-47131997)
chr3 (281-345)||(20192664-20192728)
chr3 (256-312)||(36445655-36445711)
chr3 (315-347)||(39343022-39343054)
[»] scaffold0024 (1 HSPs)
scaffold0024 (249-356)||(27492-27599)
[»] scaffold0590 (1 HSPs)
scaffold0590 (258-331)||(1146-1219)
[»] scaffold0275 (1 HSPs)
scaffold0275 (258-331)||(2756-2829)
[»] scaffold0116 (1 HSPs)
scaffold0116 (284-357)||(18015-18087)
[»] scaffold0508 (1 HSPs)
scaffold0508 (256-358)||(9820-9922)
[»] scaffold0199 (1 HSPs)
scaffold0199 (250-347)||(6741-6836)
[»] scaffold0654 (1 HSPs)
scaffold0654 (248-345)||(6695-6792)
[»] scaffold0014 (1 HSPs)
scaffold0014 (248-345)||(116614-116711)
[»] scaffold0053 (1 HSPs)
scaffold0053 (283-347)||(20129-20193)


Alignment Details
Target: chr8 (Bit Score: 236; Significance: 1e-130; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 80 - 361
Target Start/End: Complemental strand, 11056989 - 11056709
Alignment:
Q  80 catcatcacacaaaacatctaattcaatcttcattcactcaacaaatagatattgccaatcaagcaaaatatcttcataaaaaggcnnnnnnncaaatgg 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||    
T  11056989 catcatcacacaaaacatctaattcaatcttcattcactcaacaaatagatattgccaatcaagcaaaatatcttcataaaaaggcaaaaaa-caaatgg 11056891  T
Q  180 acaatactttttagttaaaaataattaccaaagaggccctgtttagataaacaacctaattaagcacttataagctcttatcatataagtgttcatgcat 279  Q
    |||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11056890 acaatattttttagttaaaaataattaccactgaggccctgtttagataaacaacctaattaagcacttataagctcttatcatataagtgttcatgcat 11056791  T
Q  280 gagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatccccta 361  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  11056790 gagctatttctataacaaaaggaaaaataaagttgaactattttcatataagctataagttgttttcaaaacctatccccta 11056709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 281 - 357
Target Start/End: Original strand, 29973029 - 29973105
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatcc 357  Q
    |||||||||| ||||| |||| ||||||||||| ||||||||||| ||||| ||||||||||||||| || ||||||    
T  29973029 agctatttctttaacacaaggtaaaataaagtcaaactattttcacataagctataagttgttttcataagctatcc 29973105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 256 - 323
Target Start/End: Complemental strand, 40728565 - 40728498
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactatttt 323  Q
    |||||||||||||||||||||||| || |||||||||||||||||  ||||||||||| |||| ||||    
T  40728565 cttatcatataagtgttcatgcataagttatttctataacaaaagataaaataaagtcaaactgtttt 40728498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 347
Target Start/End: Complemental strand, 6864584 - 6864515
Alignment:
Q  281 agctatttctataaca--aaagga-aaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||||||||||||  |||||| ||||||||||| |||||||||||| ||||||||||||||||||||    
T  6864584 agctatttctataacataaaaggataaaataaagtcaaactattttcatgtaagttataagttgttttca 6864515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 356
Target Start/End: Complemental strand, 1470978 - 1470903
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatc 356  Q
    |||||||||||||| |||||  ||||||||||| || || ||||||||||| |||||| |||||||| ||||||||    
T  1470978 agctatttctataataaaagataaaataaagtcaaattactttcatataagctataagctgttttcataacctatc 1470903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 357
Target Start/End: Complemental strand, 27728142 - 27728067
Alignment:
Q  282 gctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatcc 357  Q
    ||||||||||||| |||||  ||||||||||| ||||||||||||||||  ||| ||||||||||| || ||||||    
T  27728142 gctatttctataaaaaaagataaaataaagtcaaactattttcatataaagtattagttgttttcataagctatcc 27728067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 274 - 336
Target Start/End: Original strand, 2698734 - 2698796
Alignment:
Q  274 atgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttata 336  Q
    |||||| ||||||||||||| ||||| | |||||||||||||||| |||||||||||| ||||    
T  2698734 atgcataagctatttctatagcaaaaagtaaaataaagtcgaactgttttcatataagctata 2698796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 259 - 345
Target Start/End: Original strand, 10727123 - 10727209
Alignment:
Q  259 atcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgtttt 345  Q
    |||||||||||| | |||||| ||||||||||||| ||||||   ||||||| || || | |||||| |||||||||||||||||||    
T  10727123 atcatataagtgcttatgcataagctatttctatagcaaaagatgaaataaattcaaagtgttttcacataagttataagttgtttt 10727209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 285 - 347
Target Start/End: Complemental strand, 30600467 - 30600405
Alignment:
Q  285 atttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||||| |||||   |||||||||||||||||||||  ||||||||||||||||||||||    
T  30600467 atttctatagcaaaaactaaaataaagtcgaactatttttgtataagttataagttgttttca 30600405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 249 - 347
Target Start/End: Original strand, 35869753 - 35869851
Alignment:
Q  249 ataagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||| ||||||||||||||  | ||| || ||| ||||||| |||||||   |||||||| || ||| ||||||||||||| |||||||||||||||    
T  35869753 ataagcacttatcatataagttcttatgtataagcgatttctacaacaaaatataaaataaattcaaacaattttcatataagctataagttgttttca 35869851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 357
Target Start/End: Original strand, 11415077 - 11415178
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctat 355  Q
    ||||||||||||||||||||| || ||| ||| || || ||| ||| | ||||||||| || |||||| |||||||||||| | |||||||| || ||||    
T  11415077 cttatcatataagtgttcatgtataagccattgctttagcaagaggtagaataaagtcaaattatttttatataagttatacgctgttttcataagctat 11415176  T
Q  356 cc 357  Q
    ||    
T  11415177 cc 11415178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 347
Target Start/End: Original strand, 1664300 - 1664395
Alignment:
Q  250 taagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||| ||| ||| |||||||| ||  || |||||||| |||||||||||| |||||||||| ||||| |||||  | |||||| ||||||||||||    
T  1664300 taagcttttagcatgtaagtgtttatatataagctatttttataacaaaaggtaaaataaagttgaacttttttc--acaagttaaaagttgttttca 1664395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 345
Target Start/End: Original strand, 8799356 - 8799417
Alignment:
Q  284 tatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgtttt 345  Q
    |||||||||||||||||  ||||||||||| |||||||| || |||| ||||||| ||||||    
T  8799356 tatttctataacaaaagataaaataaagtcaaactatttccagataaattataaggtgtttt 8799417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 357
Target Start/End: Original strand, 4558730 - 4558822
Alignment:
Q  265 taagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatcc 357  Q
    |||||||| ||| || |||||||||||||| |||||  ||||||||||  || |||||||||||| | |||||| ||||| || || ||||||    
T  4558730 taagtgtttatgtataagctatttctataataaaagataaaataaagttaaattattttcatatatgctataagctgtttccataagctatcc 4558822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 356
Target Start/End: Complemental strand, 16210969 - 16210933
Alignment:
Q  320 ttttcatataagttataagttgttttcaaaacctatc 356  Q
    |||||||||||| ||||||||||||||||||||||||    
T  16210969 ttttcatataagctataagttgttttcaaaacctatc 16210933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 348
Target Start/End: Original strand, 29699205 - 29699269
Alignment:
Q  284 tatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaa 348  Q
    |||||||||||||||||  ||||||||||| || | || |||| ||||||||||| |||||||||    
T  29699205 tatttctataacaaaagataaaataaagtcaaaatgttgtcatctaagttataagctgttttcaa 29699269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 356
Target Start/End: Original strand, 1666962 - 1667065
Alignment:
Q  250 taagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaa 349  Q
    |||||| ||| |||||||||||| ||  || |||||||| ||||||||||||  ||||||||| ||||| |||||  | |||||||||||| |||||| |    
T  1666962 taagcttttagcatataagtgtttatatataagctatttttataacaaaaggtcaaataaagttgaact-ttttc--acaagttataagtttttttcaca 1667058  T
Q  350 acctatc 356  Q
    | |||||    
T  1667059 agctatc 1667065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 356
Target Start/End: Complemental strand, 1889272 - 1889170
Alignment:
Q  250 taagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaa 349  Q
    |||||| ||| |||||||||||| ||  || |||||||| ||||||||||||  ||||||||| ||||| ||||||||  ||||||||||| |||||| |    
T  1889272 taagcttttagcatataagtgtttatctataagctattt-tataacaaaaggtcaaataaagttgaact-ttttcata--agttataagtttttttcaca 1889177  T
Q  350 acctatc 356  Q
    | |||||    
T  1889176 agctatc 1889170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 216 - 338
Target Start/End: Original strand, 7026609 - 7026736
Alignment:
Q  216 ccctgtttagataaacaacctaattaagcactta-----taagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaa 310  Q
    |||||||| |||||||||| |||||||||| |||     ||| |  |||||||||||||| | |||||| ||||| |  |||||||||||  ||||||||    
T  7026609 ccctgtttggataaacaacttaattaagcatttacagcataaacatttatcatataagtgcttatgcataagctactgttataacaaaagataaaataaa 7026708  T
Q  311 gtcgaactattttcatataagttataag 338  Q
    ||  || | |||||||||||| ||||||    
T  7026709 gtaaaattgttttcatataaggtataag 7026736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 347
Target Start/End: Complemental strand, 28769486 - 28769395
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||||||||| || | ||| || ||||||| ||||||||||    ||||| ||||| |||||||||| |||||| |||||| ||||||||    
T  28769486 cttatcatataaatgcttatgtataagctattcctataacaaactataaaattaagtcaaactattttcttataagctataagctgttttca 28769395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 346
Target Start/End: Complemental strand, 34213629 - 34213586
Alignment:
Q  303 aaaataaagtcgaactattttcatataagttataagttgttttc 346  Q
    ||||||||||| ||||| ||||||||||||||| ||||||||||    
T  34213629 aaaataaagtcaaactactttcatataagttatgagttgttttc 34213586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 345
Target Start/End: Complemental strand, 35453740 - 35453681
Alignment:
Q  286 tttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgtttt 345  Q
    |||||| ||||||||  ||||||||||  ||||| |||||||||||||||| ||||||||    
T  35453740 tttctacaacaaaagataaaataaagttaaactagtttcatataagttataggttgtttt 35453681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 25867034 - 25867084
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataag 331  Q
    ||||||||||||||||||||   |||||||||| || ||||||||||||||    
T  25867034 agctatttctataacaaaagatgaaataaagtcaaaatattttcatataag 25867084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 347
Target Start/End: Complemental strand, 34173240 - 34173158
Alignment:
Q  266 aagtgttcatgcatgagctatttctataacaaaaggaaaaata-aagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||| || |||||| |||||| ||||||||||| |||||| ||||  || ||||||| |||||| |||||||| ||||||    
T  34173240 aagtgtttatacatgagatatttcaataacaaaaggtaaaatagaagttaaattattttcgtataagctataagttattttca 34173158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 357
Target Start/End: Original strand, 34770842 - 34770916
Alignment:
Q  283 ctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatcc 357  Q
    ||||||| || |||||||  ||||||||||| || | ||||||| |||| ||||||||||||||| || ||||||    
T  34770842 ctatttccattacaaaagataaaataaagtcaaattgttttcatttaagctataagttgttttcataagctatcc 34770916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 347
Target Start/End: Original strand, 42597349 - 42597415
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||||||||||||||||  ||||||||||  || | |||||||  ||| |||||||||||||||    
T  42597349 agctatttctataacaaaagataaaataaagtaaaattgttttcatgcaagctataagttgttttca 42597415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 335
Target Start/End: Complemental strand, 6875384 - 6875328
Alignment:
Q  281 agctatttctataaca--aaaggaaaaataaagtcgaactattttcatataagttat 335  Q
    |||| |||||||||||  ||||  ||||||||||| |||||||||||||||||||||    
T  6875384 agctgtttctataacataaaagacaaaataaagtcaaactattttcatataagttat 6875328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 8194132 - 8194095
Alignment:
Q  214 ggccctgtttagataaacaacctaattaagcacttata 251  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  8194132 ggccctgtttagataaacaacttaattaagcccttata 8194095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 313
Target Start/End: Original strand, 14482125 - 14482182
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtc 313  Q
    ||||||||||||||| | ||| || | ||||||||||||||||||  |||||||||||    
T  14482125 cttatcatataagtgcttatgtataaactatttctataacaaaagataaaataaagtc 14482182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 26215444 - 26215493
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataa 330  Q
    ||||||||||||||||||||  ||||||||||  |||||||||| |||||    
T  26215444 agctatttctataacaaaagataaaataaagttaaactattttcgtataa 26215493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 357
Target Start/End: Original strand, 30013142 - 30013242
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctat 355  Q
    ||||| ||||||||| | |||  | |||||||| ||||||||||||  |||| ||||| |||| ||| |||||||| |||||| |||||||| || ||||    
T  30013142 cttattatataagtgcttatgtttaagctattt-tataacaaaaggtcaaattaagtcaaactgtttccatataagctataagctgttttcataagctat 30013240  T
Q  356 cc 357  Q
    ||    
T  30013241 cc 30013242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 33209342 - 33209293
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataa 330  Q
    ||||||||||||||  ||||  |||||||||||||||| |||||||||||    
T  33209342 agctatttctataatgaaagataaaataaagtcgaactgttttcatataa 33209293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 42508709 - 42508628
Alignment:
Q  257 ttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataag 338  Q
    |||||||||||| ||| ||| ||  ||||||||||||| ||||   |||||||||||||   ||||||||||||| ||||||    
T  42508709 ttatcatataagggtttatgtattggctatttctataataaaatataaaataaagtcgattgattttcatataagctataag 42508628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 356
Target Start/End: Complemental strand, 1892333 - 1892261
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatc 356  Q
    |||||||| |||||||||||| |||||||||| ||||  |||||  |||||||||| |||||||||| || |||||    
T  1892333 agctatttttataacaaaaggtaaaataaagttgaac-gttttc--ataagttatatgttgttttcacaagctatc 1892261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 357
Target Start/End: Complemental strand, 10075673 - 10075597
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatcc 357  Q
    |||||||| ||||| ||||  | || ||||||| ||||||||| |||||||||||||| | |||||| || ||||||    
T  10075673 agctatttgtataataaaaacataattaaagtcaaactatttttatataagttataagctattttcataagctatcc 10075597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 356
Target Start/End: Original strand, 31884481 - 31884617
Alignment:
Q  225 gataaacaacctaattaagcacttata-----agctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaacta 319  Q
    ||||||||||  |||||||||||||||     ||| ||||||||| |||||   ||| || || ||||||||||||||||   ||||| || | ||| |     
T  31884481 gataaacaactcaattaagcacttatagcataagcgcttatcatacaagtgcatatgtataagttatttctataacaaaatataaaatcaaattgaattg 31884580  T
Q  320 ttttcatataagttataagttgttttcaaaacctatc 356  Q
    |||||||||||| ||||| ||||||||| || |||||    
T  31884581 ttttcatataagctataaattgttttcataagctatc 31884617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 356
Target Start/End: Complemental strand, 35298624 - 35298524
Alignment:
Q  257 ttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttc-atataagttataagttgttttcaaaacctat 355  Q
    |||||||||||||| | ||| || |||||||||  |||||||||  ||||||||| | |||  ||||| ||||||  ||||||||||||||| || ||||    
T  35298624 ttatcatataagtgcttatgtataagctatttcagtaacaaaagataaaataaagccaaacagttttcaatataaactataagttgttttcataagctat 35298525  T
Q  356 c 356  Q
    |    
T  35298524 c 35298524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 4e-20; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 249 - 347
Target Start/End: Original strand, 24929409 - 24929507
Alignment:
Q  249 ataagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||| |||||||||||||| ||||  || |||| ||||||||||||||||||  ||||||||||| |||| |||||||| ||| |||||||||||||||    
T  24929409 ataatctcttatcatataattgtttttgtatgaactatttctataacaaaagataaaataaagtctaactgttttcataaaagctataagttgttttca 24929507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 283 - 357
Target Start/End: Original strand, 10192234 - 10192308
Alignment:
Q  283 ctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatcc 357  Q
    |||||| |||||||||||  | ||||||||| || | ||||||||||||||||||||||||||||||| ||||||    
T  10192234 ctatttttataacaaaagatagaataaagtcaaattgttttcatataagttataagttgttttcaaaagctatcc 10192308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 331
Target Start/End: Original strand, 44319866 - 44319947
Alignment:
Q  249 ataagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataag 331  Q
    |||||| ||||||||||||||| ||||| || | |||||||||||| |||||  |||||||||||||||| ||||||||||||    
T  44319866 ataagcacttatcatataagtgctcatgtataaactatttctataa-aaaagataaaataaagtcgaactgttttcatataag 44319947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 257 - 330
Target Start/End: Original strand, 36734817 - 36734890
Alignment:
Q  257 ttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataa 330  Q
    |||||||||||||| | ||| || | || |||||||||||||||| ||||||||||| ||||||||||||||||    
T  36734817 ttatcatataagtgcttatgtataatctctttctataacaaaaggtaaaataaagtcaaactattttcatataa 36734890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 283 - 343
Target Start/End: Original strand, 4071832 - 4071892
Alignment:
Q  283 ctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgtt 343  Q
    ||||||||||||||||||  ||||||||||| || |||||||||||||| |||||||||||    
T  4071832 ctatttctataacaaaagataaaataaagtcaaattattttcatataagctataagttgtt 4071892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 217 - 356
Target Start/End: Complemental strand, 5219691 - 5219547
Alignment:
Q  217 cctgtttagataaacaacctaattaagcacttataagctc-----ttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaag 311  Q
    |||||||||||||||||| |||||||| ||||||||  |      |||||||||||||| ||||| ||  ||||| ||||||| |||||  |||||||||    
T  5219691 cctgtttagataaacaacataattaagaacttataacataattgattatcatataagtgctcatgtatatgctatctctataataaaagataaaataaag 5219592  T
Q  312 tcgaactattttcatataagttataagttgttttcaaaacctatc 356  Q
    |  |||||||||||||||| | ||||| | |||||| || |||||    
T  5219591 ttaaactattttcatataaataataagctattttcacaaactatc 5219547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 283 - 347
Target Start/End: Original strand, 49085939 - 49086003
Alignment:
Q  283 ctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||| |||||||||||  ||||||| ||| ||||||||||||| |||||||||||||||||||    
T  49085939 ctatttatataacaaaagataaaataatgtcaaactattttcatacaagttataagttgttttca 49086003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 356
Target Start/End: Original strand, 49219090 - 49219162
Alignment:
Q  284 tatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatc 356  Q
    ||||||||||||||||   ||||||||||| || |||||||||||||| ||||||||||||||| || |||||    
T  49219090 tatttctataacaaaatataaaataaagtcaaattattttcatataagctataagttgttttcataaactatc 49219162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 256 - 356
Target Start/End: Complemental strand, 54325184 - 54325084
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctat 355  Q
    ||||||||||||||| |  || || | |||||||||| |||||||  ||||||||||| |||| |||||||||||| |||||| | ||||||||| ||||    
T  54325184 cttatcatataagtgcttgtgtataaactatttctattacaaaagataaaataaagtcaaactgttttcatataagctataagctattttcaaaagctat 54325085  T
Q  356 c 356  Q
    |    
T  54325084 c 54325084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 356
Target Start/End: Complemental strand, 2980617 - 2980513
Alignment:
Q  257 ttatcatataagtgttcatgcatgagctatttctataacaaaag--gaaa---aataaagtcgaactattttcatataagttataagttgttttcaaaac 351  Q
    |||||||||||||| | ||| || |||||||||||||||||||   ||||   ||||||||| ||||||||||||| ||||||||||||||| ||| ||     
T  2980617 ttatcatataagtgcttatgtataagctatttctataacaaaaaatgaaacaaaataaagtcaaactattttcatacaagttataagttgttctcataag 2980518  T
Q  352 ctatc 356  Q
    |||||    
T  2980517 ctatc 2980513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 347
Target Start/End: Complemental strand, 24160642 - 24160551
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||||||||||| | ||  || |||| |||||||||||||||  || ||||| || |||||||||||| |||| |||||||||||||||    
T  24160642 cttatcatataagtgcttataaataagctttttctataacaaaagataatataaattcaaactattttcatgtaagctataagttgttttca 24160551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 249 - 347
Target Start/End: Original strand, 24443954 - 24444052
Alignment:
Q  249 ataagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||| ||||||||||||||  | ||| || ||| ||||||| |||||||   |||||||| || ||| ||||||||||||| |||||||||||||||    
T  24443954 ataagcacttatcatataagttcttatgtataagcgatttctacaacaaaatataaaataaattcaaacaattttcatataagctataagttgttttca 24444052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 250 - 356
Target Start/End: Complemental strand, 28582062 - 28581957
Alignment:
Q  250 taagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaa 349  Q
    ||||| ||||||||| ||||||| ||| || | |||||| | || ||||||  ||||||||||| ||||||||||| ||| ||||| |||||||||||||    
T  28582062 taagcacttatcatagaagtgtttatgtataaactattttt-tagcaaaagataaaataaagtcaaactattttcagatatgttatgagttgttttcaaa 28581964  T
Q  350 acctatc 356  Q
    | |||||    
T  28581963 agctatc 28581957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 42322018 - 42321936
Alignment:
Q  264 ataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttc 346  Q
    ||||||||| ||| || |||||||| ||||||||| |  ||||||||||| || | ||||||||||| |||||||||||||||    
T  42322018 ataagtgtttatgaataagctatttttataacaaatgataaaataaagtcaaattgttttcatataaattataagttgttttc 42321936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 346
Target Start/End: Original strand, 52735070 - 52735135
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttc 346  Q
    |||||||||| |||||||||  ||||||||||| || || |||||||||||||||| |||||||||    
T  52735070 agctatttctgtaacaaaagataaaataaagtcaaattactttcatataagttatatgttgttttc 52735135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 4191663 - 4191734
Alignment:
Q  257 ttatcatataagtgttcatgcatgagctatttctataacaaaag-gaaaaataaagtcgaactattttcata 327  Q
    |||||||||||||| | ||| || ||||||||||||||||||||  |||||||||||| |||| ||||||||    
T  4191663 ttatcatataagtgcttatgtataagctatttctataacaaaagataaaaataaagtcaaactgttttcata 4191734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 347
Target Start/End: Complemental strand, 18628662 - 18628599
Alignment:
Q  284 tatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||| ||||||||||||||||| |||| |||| |||| |||||||||||||  ||||||||    
T  18628662 tatttctttaacaaaaggaaaaatatagtcaaactgtttttatataagttataaactgttttca 18628599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 357
Target Start/End: Original strand, 18630605 - 18630704
Alignment:
Q  258 tatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatcc 357  Q
    ||||||||||| | | |||||| | ||||||| ||||||||||  ||||||||||| |    |||||||||||| ||||||||||||||| || ||||||    
T  18630605 tatcatataagcgcttatgcataaactatttcaataacaaaagataaaataaagtcaattggttttcatataagctataagttgttttcacaagctatcc 18630704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 331
Target Start/End: Original strand, 21952506 - 21952573
Alignment:
Q  264 ataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataag 331  Q
    ||||||||| |||||| ||||||||||||||||||||| ||||| ||||| |||| || || ||||||    
T  21952506 ataagtgtttatgcataagctatttctataacaaaaggtaaaatcaagtcaaactgttatcgtataag 21952573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 21953223 - 21953278
Alignment:
Q  283 ctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataag 338  Q
    ||||||||||||||||||| ||||||||||| |||| |||| ||||||| ||||||    
T  21953223 ctatttctataacaaaagggaaaataaagtcaaactctttttatataagctataag 21953278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 36722789 - 36722727
Alignment:
Q  283 ctatttctataacaaaaggaaaaa-taaagtcgaactattttcatataagttataagttgtttt 345  Q
    ||||||| |||||||||| ||||| |||||| ||||| ||||||||||||||||||||||||||    
T  36722789 ctatttccataacaaaagaaaaaaataaagt-gaactgttttcatataagttataagttgtttt 36722727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 330
Target Start/End: Complemental strand, 7749224 - 7749155
Alignment:
Q  261 catataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataa 330  Q
    |||||||||||| ||| ||  ||||||||||||| |||||  |||||||| |||||||||||| ||||||    
T  7749224 catataagtgtttatgtatacgctatttctataataaaagagaaaataaaatcgaactatttttatataa 7749155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 347
Target Start/End: Complemental strand, 30207723 - 30207627
Alignment:
Q  250 taagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||| ||||||||||||||| | ||| ||  | || |||||||||||||   |||||||| || |||| |||||||||||| |||||||||||||||    
T  30207723 taagcacttatcatataagtgcttatgtatatgttagttctataacaaaaaataaaataaa-tcaaactgttttcatataagctataagttgttttca 30207627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 325
Target Start/End: Original strand, 47970245 - 47970310
Alignment:
Q  260 tcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttca 325  Q
    ||||||||||| | ||| || ||||||||||||||||||||  ||||| ||||| |||||||||||    
T  47970245 tcatataagtgcttatgtataagctatttctataacaaaagataaaatgaagtcaaactattttca 47970310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 10173446 - 10173526
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttata 336  Q
    ||||||||||||||| | ||| |||| |||||| || || ||||| |||| || |||| ||||||||||||||||| ||||    
T  10173446 cttatcatataagtgcttatgtatgaactatttatagaataaaagtaaaagtatagtcaaactattttcatataagctata 10173526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 331
Target Start/End: Complemental strand, 20936122 - 20936074
Alignment:
Q  283 ctatttctataacaaaaggaaaaataaagtcgaactattttcatataag 331  Q
    ||||||||||||||||||  ||||||||||| |||||||||||| ||||    
T  20936122 ctatttctataacaaaagataaaataaagtcaaactattttcatgtaag 20936074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 337
Target Start/End: Original strand, 30024624 - 30024704
Alignment:
Q  257 ttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataa 337  Q
    |||||||||||||  | |||||| || |||||||||||||||||  ||||||||||  || | |||||||||||| |||||    
T  30024624 ttatcatataagtacttatgcataagttatttctataacaaaagataaaataaagtaaaattgttttcatataagctataa 30024704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 331
Target Start/End: Original strand, 32724069 - 32724117
Alignment:
Q  283 ctatttctataacaaaaggaaaaataaagtcgaactattttcatataag 331  Q
    |||||||||| |||||||  ||||||||||| |||||||||||||||||    
T  32724069 ctatttctattacaaaagataaaataaagtcaaactattttcatataag 32724117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 8422982 - 8422886
Alignment:
Q  258 tatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatc 356  Q
    ||||||||| ||| | ||| || |||||||| ||||| |||||  |||||||||||  | | |||||||||||| ||||||||||||||| || |||||    
T  8422982 tatcatatatgtgcttatgtataagctatttttataaaaaaagataaaataaagtc--attgttttcatataagctataagttgttttcacaatctatc 8422886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 22684663 - 22684588
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataag 331  Q
    |||||||||||| || |  || || |||||||||||||||||| || ||||||||||| || | ||||||||||||    
T  22684663 cttatcatataaatgcttctgtataagctatttctataacaaacggtaaaataaagtcaaattgttttcatataag 22684588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 248 - 347
Target Start/End: Complemental strand, 45128465 - 45128366
Alignment:
Q  248 tataagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||| |||||||||||||   | ||| || | ||||||||||||||||||  ||||| || || || |||| ||||||||| ||||| |||||||||    
T  45128465 tataagcccttatcatataagaacttatgtataaactatttctataacaaaagataaaatcaaatcaaattattctcatataagctataaattgttttca 45128366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 347
Target Start/End: Original strand, 46796941 - 46797032
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||||||||||  | |||||| ||||||||  |||||||| |  |||||||| || |  | ||| ||||||||||||||||||||||||    
T  46796941 cttatcatataagttcttatgcataagctattttcataacaaacgataaaataaattcaatatgtttccatataagttataagttgttttca 46797032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 347
Target Start/End: Original strand, 17884016 - 17884082
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||||||||||||||||  ||||||||||  || | ||||  |||||||||| |||||||||||    
T  17884016 agctatttctataacaaaagataaaataaagttaaattgtttttgtataagttatcagttgttttca 17884082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 347
Target Start/End: Original strand, 19691355 - 19691421
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||||||||||| |||||  ||||||||||| | || |||||||| || |||||||||| |||||    
T  19691355 agctatttctataataaaagttaaaataaagtcaacctgttttcatagaaattataagttgatttca 19691421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 347
Target Start/End: Original strand, 19701940 - 19702006
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||||||||||| |||||  ||||||||||| | || |||||||| || |||||||||| |||||    
T  19701940 agctatttctataataaaagttaaaataaagtcaacctgttttcatagaaattataagttgatttca 19702006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 337
Target Start/End: Complemental strand, 21593131 - 21593078
Alignment:
Q  283 ctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataa 337  Q
    ||||||||||||| ||||  ||||||||||| ||||||||||||||||| |||||    
T  21593131 ctatttctataactaaagataaaataaagtc-aactattttcatataagctataa 21593078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 344
Target Start/End: Original strand, 24193466 - 24193596
Alignment:
Q  219 tgtttagataaacaacctaattaagcacttata-----agctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtc 313  Q
    ||||| |||||||||| ||||| ||||||||||     | | ||||||||||||||  | ||| || || ||||| || |||||||   |||| | |||     
T  24193466 tgtttggataaacaacttaattgagcacttatagcataaacgcttatcatataagtacttatgtataagttatttttacaacaaaatataaaacagagtt 24193565  T
Q  314 gaactattttcatataagttataagttgttt 344  Q
     ||||||||||||||||||||||||||||||    
T  24193566 aaactattttcatataagttataagttgttt 24193596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 338
Target Start/End: Original strand, 27623586 - 27623640
Alignment:
Q  284 tatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataag 338  Q
    ||||| |||||||||||  ||||||||||| ||||||||| ||||||| ||||||    
T  27623586 tatttgtataacaaaagataaaataaagtcaaactattttaatataagctataag 27623640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 300
Target Start/End: Original strand, 52645625 - 52645667
Alignment:
Q  258 tatcatataagtgttcatgcatgagctatttctataacaaaag 300  Q
    ||||||||||||||| ||| ||||||||||||| |||||||||    
T  52645625 tatcatataagtgtttatgtatgagctatttctgtaacaaaag 52645667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 347
Target Start/End: Complemental strand, 55870459 - 55870397
Alignment:
Q  285 atttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||| |||||||||||   |||||||||| |||| |||||| ||||| |||||||||||||||    
T  55870459 atttttataacaaaagatcaaataaagtcaaactgttttcacataagctataagttgttttca 55870397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 297
Target Start/End: Complemental strand, 7205965 - 7205916
Alignment:
Q  248 tataagctcttatcatataagtgttcatgcatgagctatttctataacaa 297  Q
    ||||||| |||||||||||| |||| |||||| |||||| ||||||||||    
T  7205965 tataagcacttatcatataactgtttatgcataagctatatctataacaa 7205916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 8130127 - 8130188
Alignment:
Q  286 tttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||||||||||||  || |||||||| || |||||||||||||| |||||  ||||||||    
T  8130127 tttctataacaaaagataacataaagtcaaattattttcatataagctataaactgttttca 8130188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 347
Target Start/End: Complemental strand, 17223146 - 17223081
Alignment:
Q  282 gctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||||||||||| |||| ||||||||||||| || || ||||| ||  |||||||| ||||||    
T  17223146 gctatttctataacacaaggtaaaataaagtcgagctgttctcatacaatctataagttattttca 17223081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 338
Target Start/End: Original strand, 21952909 - 21952966
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataag 338  Q
    ||||||||||||||||| | | ||||||||||| || | |||||||||||| ||||||    
T  21952909 agctatttctataacaacaagtaaaataaagtcaaattgttttcatataagctataag 21952966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 340
Target Start/End: Complemental strand, 46013420 - 46013363
Alignment:
Q  283 ctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagtt 340  Q
    ||||||||  ||||||||  ||||||||||| |||| |||| ||||||||||||||||    
T  46013420 ctatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 46013363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 357
Target Start/End: Complemental strand, 46415939 - 46415838
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctat 355  Q
    |||||||| |||||| | | | || ||||||||| ||||||||||  ||||||   || |||| |||||||| |||||||||||| |||||| || ||||    
T  46415939 cttatcatctaagtgcttacgtataagctatttcaataacaaaagataaaataggatcaaactgttttcatacaagttataagttcttttcataagctat 46415840  T
Q  356 cc 357  Q
    ||    
T  46415839 cc 46415838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 318
Target Start/End: Complemental strand, 51044597 - 51044544
Alignment:
Q  265 taagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaact 318  Q
    |||||||| ||| || ||||||||||||||||||||  ||||||||||| ||||    
T  51044597 taagtgtttatgtataagctatttctataacaaaagataaaataaagtcaaact 51044544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 53626729 - 53626790
Alignment:
Q  286 tttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||||||||||||  |||||||| || || | |||||||||||| |||||| ||||||||    
T  53626729 tttctataacaaaagataaaataaattcaaaatgttttcatataagctataagctgttttca 53626790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 347
Target Start/End: Original strand, 54414863 - 54414966
Alignment:
Q  247 ttataagctcttatcatataagtgttcatgcatgagctatt---tctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgtt 343  Q
    |||||||| ||||||||||||||| | ||| || |||||||   | |||||  ||||  ||||||||||| | |||||||| ||||||||||||  ||||    
T  54414863 ttataagcgcttatcatataagtgcttatgtataagctattatttttataaagaaagagaaaataaagtcaatctattttcctataagttataaactgtt 54414962  T
Q  344 ttca 347  Q
    ||||    
T  54414963 ttca 54414966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 357
Target Start/End: Original strand, 3175899 - 3175975
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatcc 357  Q
    ||||| ||||||| ||||||  ||||||||||| || | ||||||  ||||||||||| |||||||| || ||||||    
T  3175899 agctacttctatagcaaaagataaaataaagtcaaattgttttcaagtaagttataagctgttttcataagctatcc 3175975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 330
Target Start/End: Original strand, 19422335 - 19422415
Alignment:
Q  250 taagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataa 330  Q
    ||||| |||||||||||| || | ||| || || |||||||||||||||||  | ||||||||| |||  |||||||||||    
T  19422335 taagcgcttatcatataaatgcttatgtataagttatttctataacaaaagatataataaagtcaaacatttttcatataa 19422415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 22471313 - 22471345
Alignment:
Q  315 aactattttcatataagttataagttgttttca 347  Q
    |||| ||||||||||||||||||||||||||||    
T  22471313 aactgttttcatataagttataagttgttttca 22471345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 346
Target Start/End: Complemental strand, 29194512 - 29194460
Alignment:
Q  294 acaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttc 346  Q
    |||||||  |||||||| || ||||||||||||||||||||||| || |||||    
T  29194512 acaaaagataaaataaaatcaaactattttcatataagttataacttattttc 29194460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 300
Target Start/End: Original strand, 41050619 - 41050663
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaag 300  Q
    ||||||||||||||||| ||| || | ||||||||||||||||||    
T  41050619 cttatcatataagtgttaatgtataaactatttctataacaaaag 41050663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 53155213 - 53155259
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatata 329  Q
    |||||||| ||||||||||| | ||||||||||||||||||||||||||    
T  53155213 agctattt-tataacaaaag-ataaataaagtcgaactattttcatata 53155259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 6e-19; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 256 - 340
Target Start/End: Complemental strand, 35135809 - 35135725
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagtt 340  Q
    |||| |||||||||||| ||| || || |||||||||||||||||  ||||||||||| ||||||||||||||||| ||||||||    
T  35135809 cttaacatataagtgtttatgtataagatatttctataacaaaagataaaataaagtcaaactattttcatataagctataagtt 35135725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 249 - 337
Target Start/End: Complemental strand, 38766997 - 38766909
Alignment:
Q  249 ataagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataa 337  Q
    |||||| ||||| ||||||||||| ||| ||||| |||||||||||||||||  ||||||||||  |||||||||||| ||||||||||    
T  38766997 ataagcgcttatgatataagtgttaatggatgagttatttctataacaaaagctaaaataaagttaaactattttcatctaagttataa 38766909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 250 - 339
Target Start/End: Complemental strand, 12407813 - 12407725
Alignment:
Q  250 taagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagt 339  Q
    ||||||||||||||| ||||||| ||| || ||||||||||||||||||||  ||||||||||  | || ||||||| ||||||||||||    
T  12407813 taagctcttatcatacaagtgtt-atgtataagctatttctataacaaaagataaaataaagtaaatctgttttcatgtaagttataagt 12407725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 281 - 346
Target Start/End: Original strand, 14295454 - 14295519
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttc 346  Q
    ||||||||||||||||||||  ||||||||||| |||| |||||||||||| |||||| |||||||    
T  14295454 agctatttctataacaaaagataaaataaagtcaaactgttttcatataagctataagctgttttc 14295519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 257 - 357
Target Start/End: Original strand, 35960338 - 35960437
Alignment:
Q  257 ttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatc 356  Q
    ||||||||||||| || |||||| | |||||||||||| |||||  ||||||||||| ||||| ||||||||||  ||||||||| ||||| || |||||    
T  35960338 ttatcatataagtatttatgcataaactatttctataataaaagataaaataaagtcaaacta-tttcatataaactataagttgatttcataagctatc 35960436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 283 - 345
Target Start/End: Complemental strand, 28586886 - 28586824
Alignment:
Q  283 ctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgtttt 345  Q
    ||||||||||||||||||  ||||||||||| |||| ||||||||||| ||||||| ||||||    
T  28586886 ctatttctataacaaaagataaaataaagtcaaactgttttcatataaattataagctgtttt 28586824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 283 - 333
Target Start/End: Complemental strand, 37063194 - 37063144
Alignment:
Q  283 ctatttctataacaaaaggaaaaataaagtcgaactattttcatataagtt 333  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  37063194 ctatttctataacaaaagataaaataaagtcaaactattttcatataagtt 37063144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 347
Target Start/End: Complemental strand, 39257580 - 39257443
Alignment:
Q  214 ggccctgtttagataaacaacctaattaagcacttata-----agctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaata 308  Q
    |||| ||||| |||||||||| ||||||||| ||||||     | || ||||||| |||||| | ||| ||  ||||| |||||||||||||| ||||||    
T  39257580 ggccttgtttggataaacaacttaattaagcgcttatagcataaactattatcatgtaagtgcttatgtatatgctatctctataacaaaaggtaaaata 39257481  T
Q  309 aagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||| |||  |||||||||||  |||||||||||||||    
T  39257480 aagtcaaac-cttttcatataaactataagttgttttca 39257443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 346
Target Start/End: Original strand, 19177403 - 19177492
Alignment:
Q  257 ttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttc 346  Q
    |||||||||||||| | ||| || | ||||||||| |||| |||  ||||| ||||| |||| |||||||||||| ||||||||||||||    
T  19177403 ttatcatataagtgcttatgtataaactatttctacaacagaagataaaattaagtctaactgttttcatataagctataagttgttttc 19177492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 347
Target Start/End: Complemental strand, 18704179 - 18704092
Alignment:
Q  259 atcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||||||||  | ||| || || ||||||||||||||||| | |||||||||| | ||||||| ||||||| |||||||||||||||    
T  18704179 atcatataagttcttatgtataagttatttctataacaaaag-ataaataaagtcaagctatttttatataagctataagttgttttca 18704092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 347
Target Start/End: Original strand, 39750102 - 39750157
Alignment:
Q  292 taacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||||||  ||||||||||| |||||||||||||||||||||||  ||||||||    
T  39750102 taacaaaagataaaataaagtcaaactattttcatataagttataacctgttttca 39750157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 347
Target Start/End: Complemental strand, 39823240 - 39823177
Alignment:
Q  284 tatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||| |||||||||||  ||||||||||| ||||| ||||||||||| || ||||||||||||    
T  39823240 tatttatataacaaaagataaaataaagtcaaactactttcatataagctacaagttgttttca 39823177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 344
Target Start/End: Complemental strand, 14599427 - 14599362
Alignment:
Q  281 agctatttctataacaaaa--ggaaaaataaagtcgaactattttcatataagttataagttgttt 344  Q
    |||||||||||||||||||  |  ||||| ||||| |||| |||||||||||||||||||||||||    
T  14599427 agctatttctataacaaaactgataaaattaagtcaaactgttttcatataagttataagttgttt 14599362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 358
Target Start/End: Original strand, 4855646 - 4855723
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatccc 358  Q
    |||||||| ||||||||||   ||||||||||  || | || ||||||||||||||||||||||||| || |||||||    
T  4855646 agctatttttataacaaaaaataaaataaagttaaattgttatcatataagttataagttgttttcataaactatccc 4855723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 347
Target Start/End: Original strand, 9634729 - 9634786
Alignment:
Q  290 tataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||||||||   || |||||||||| |||||||||||| |||||||||||||||||    
T  9634729 tataacaaaagatgaactaaagtcgaagtattttcatatatgttataagttgttttca 9634786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 310
Target Start/End: Original strand, 26516174 - 26516275
Alignment:
Q  214 ggccctgtttagataaacaacctaattaagcacttata-----agctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaata 308  Q
    ||||| |||| |||||||||| ||||||||| ||||||     ||| ||||||||||||||| | ||| || ||||||||||| ||||||||  ||||||    
T  26516174 ggcccagtttggataaacaacttaattaagcgcttatagcataagcgcttatcatataagtgcttatgtataagctatttctaaaacaaaagataaaata 26516273  T
Q  309 aa 310  Q
    ||    
T  26516274 aa 26516275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 345
Target Start/End: Original strand, 36539669 - 36539758
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgtttt 345  Q
    ||||||||||||||| | |||  | |||||||| | || ||||||  ||||||||||| | || |||||||||||| |||||||||||||    
T  36539669 cttatcatataagtgcttatgtgtaagctatttgtttatcaaaagataaaataaagtcaacctgttttcatataagctataagttgtttt 36539758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 356
Target Start/End: Complemental strand, 41277450 - 41277397
Alignment:
Q  303 aaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatc 356  Q
    ||||||||||| |||| ||||||||||||||| |||||||||||| || |||||    
T  41277450 aaaataaagtcaaactgttttcatataagttaaaagttgttttcataagctatc 41277397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 327
Target Start/End: Complemental strand, 7096271 - 7096203
Alignment:
Q  259 atcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcata 327  Q
    |||||| ||||| | ||| || ||||||||||||||||||||  ||||||||||| ||| |||||||||    
T  7096271 atcatacaagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaaccattttcata 7096203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 356
Target Start/End: Original strand, 26516323 - 26516423
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctat 355  Q
    ||||||||||||||| |  |  || ||||| |||| |||||| ||  ||||||||||| ||||| |||||||||||||||||  |||||||| || ||||    
T  26516323 cttatcatataagtgctagtatataagctagttctctaacaatagataaaataaagtcaaactactttcatataagttataaactgttttcataagctat 26516422  T
Q  356 c 356  Q
    |    
T  26516423 c 26516423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 330
Target Start/End: Complemental strand, 20982282 - 20982208
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataa 330  Q
    ||||||||||||||| | ||| || |||||||||||||||||| |  ||||||||||| | |  |||||||||||    
T  20982282 cttatcatataagtgcttatgtataagctatttctataacaaaggataaaataaagtcaacccgttttcatataa 20982208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 326
Target Start/End: Original strand, 29014679 - 29014749
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcat 326  Q
    ||||||||||||||||||||| || |||||||| ||| | ||| |  ||||| ||||| ||||||||||||    
T  29014679 cttatcatataagtgttcatgtataagctatttttatgataaacgataaaatcaagtcaaactattttcat 29014749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 4991089 - 4991008
Alignment:
Q  257 ttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataag 338  Q
    ||||||||||||||||  || || |||||||| |||||||||||  || ||||  || |  |||||||||||||||||||||    
T  4991089 ttatcatataagtgtttgtgtataagctatttttataacaaaagataacataagatcaatttattttcatataagttataag 4991008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 330
Target Start/End: Original strand, 8985583 - 8985658
Alignment:
Q  258 tatcatataagtgttcatgcatgagctatttctataacaaaag---gaaaaataaagtcgaactattttcatataa 330  Q
    ||||||||||||||| ||||||   |||||||||||| |||||   ||  ||||||||| ||||||||||||||||    
T  8985583 tatcatataagtgtttatgcatacactatttctataataaaagatagagtaataaagtcaaactattttcatataa 8985658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 32059689 - 32059640
Alignment:
Q  303 aaaataaagtcgaactattttcatataagttataagttgttttcaaaacc 352  Q
    ||||||||||| |||| |||||||||||| |||||| |||||||| ||||    
T  32059689 aaaataaagtcaaactgttttcatataagctataagctgttttcataacc 32059640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 337
Target Start/End: Original strand, 37386566 - 37386619
Alignment:
Q  284 tatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataa 337  Q
    ||||||||||| ||||| |||| ||||| | |||||||||||||||||| ||||    
T  37386566 tatttctataataaaagaaaaattaaaggcaaactattttcatataagtcataa 37386619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 347
Target Start/End: Original strand, 41016148 - 41016193
Alignment:
Q  302 aaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||||| || |||| |||||||||||| |||||||||||||||    
T  41016148 aaaaataaattcaaactgttttcatataagctataagttgttttca 41016193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 347
Target Start/End: Original strand, 41017696 - 41017741
Alignment:
Q  302 aaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||||||||| ||| |||||| |||||| |||||||||||||||    
T  41017696 aaaaataaagtcaaaccattttcctataagctataagttgttttca 41017741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 345
Target Start/End: Complemental strand, 2933765 - 2933709
Alignment:
Q  289 ctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgtttt 345  Q
    |||||| |||||  ||||| ||||  |||| ||||||||||||||||||||||||||    
T  2933765 ctataataaaagataaaatgaagttaaactgttttcatataagttataagttgtttt 2933709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 347
Target Start/End: Original strand, 14331305 - 14331368
Alignment:
Q  283 ctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||||||| |||||| | ||||||||||  | |||||| |||||||||||||||| ||||||    
T  14331305 ctatttctatagcaaaag-ataaataaagtcagattatttttatataagttataagttattttca 14331368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 313
Target Start/End: Complemental strand, 29115359 - 29115303
Alignment:
Q  257 ttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtc 313  Q
    |||||||| ||||| | ||| || ||||||||||| ||||||||| |||||||||||    
T  29115359 ttatcataaaagtgcttatgtataagctatttctacaacaaaaggtaaaataaagtc 29115303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 284 - 347
Target Start/End: Complemental strand, 29007835 - 29007772
Alignment:
Q  284 tatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||||||||||||| |||| ||||||| ||||||||||||||||| |||||||||||||||    
T  29007835 tatttctataacaaaagaaaaattaaagtcaaactattttcatataagctataagttgttttca 29007772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 283 - 357
Target Start/End: Complemental strand, 7218194 - 7218120
Alignment:
Q  283 ctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatcc 357  Q
    ||||||| |||| |||||| ||||||||||| || | |||||||||||| ||||||||||||||| |||||||||    
T  7218194 ctatttccataataaaaggtaaaataaagtcaaattgttttcatataagctataagttgttttcataacctatcc 7218120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 15360827 - 15360903
Alignment:
Q  266 aagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgt 342  Q
    ||||||| ||| || || |||||||||||||||||  ||||||||||| |||| |||||||||||| ||||||||||    
T  15360827 aagtgtttatgtattagttatttctataacaaaagataaaataaagtcaaactgttttcatataagctataagttgt 15360903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 263 - 346
Target Start/End: Complemental strand, 5756826 - 5756743
Alignment:
Q  263 tataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttc 346  Q
    |||||||||||| | || ||||||||||||||||||||   | |||||||  |||| ||||||||||| |||||||||||||||    
T  5756826 tataagtgttcacgtataagctatttctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttc 5756743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 347
Target Start/End: Complemental strand, 6933149 - 6933017
Alignment:
Q  218 ctgtttagataaacaacctaattaagcacttata---agctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcg 314  Q
    |||||| |||||||||| ||||||||||||||||   | | || |||| ||||||| ||||| || ||| |||| ||||||||||   |||||||||||     
T  6933149 ctgtttggataaacaacttaattaagcacttatattaatcactaatcaaataagtgctcatgtataagccatttttataacaaaacataaaataaagtca 6933050  T
Q  315 aactattttcatataagttataagttgttttca 347  Q
    || | |||||||| ||||||| |||| ||||||    
T  6933049 aattgttttcatagaagttattagttcttttca 6933017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 357
Target Start/End: Original strand, 17269177 - 17269274
Alignment:
Q  260 tcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatcc 357  Q
    ||||||||||| | ||| || || |||||||| ||||||||  ||||||||||| || | ||||||||||||  |||||||||||||| || ||||||    
T  17269177 tcatataagtgcttatgtataagttatttctagaacaaaagtgaaaataaagtcaaattgttttcatataagcaataagttgttttcataagctatcc 17269274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 257 - 337
Target Start/End: Complemental strand, 44032145 - 44032065
Alignment:
Q  257 ttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataa 337  Q
    |||||||||||||||| ||| || |||  |||||||||||||||  ||||||||||| || | |||||||||||| |||||    
T  44032145 ttatcatataagtgtttatgtataagccgtttctataacaaaagctaaaataaagtcaaattgttttcatataagctataa 44032065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 346
Target Start/End: Original strand, 6074404 - 6074487
Alignment:
Q  263 tataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttc 346  Q
    |||||||||||| | || ||||||||||||||||||||   | |||||||  |||| |||||||||||| ||| ||||||||||    
T  6074404 tataagtgttcacgtataagctatttctataacaaaagatgatataaagttaaactgttttcatataagctatgagttgttttc 6074487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 337
Target Start/End: Original strand, 45107548 - 45107626
Alignment:
Q  258 tatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataa 337  Q
    ||||||||||||| | ||  || |||||||||||||| ||||  |||| ||||||| |||||||||||||||||||||||    
T  45107548 tatcatataagtgcttatctataagctatttctataagaaaaataaaa-taaagtcaaactattttcatataagttataa 45107626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 356
Target Start/End: Complemental strand, 25006151 - 25006081
Alignment:
Q  286 tttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatc 356  Q
    ||||||||||| | || ||||||||||| || | |||||||||||| ||||||||||||||| || |||||    
T  25006151 tttctataacagacggtaaaataaagtcaaattgttttcatataagctataagttgttttcataagctatc 25006081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 345
Target Start/End: Complemental strand, 33186097 - 33186015
Alignment:
Q  263 tataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgtttt 345  Q
    ||||| |||||||| || |||||||||||| ||| |||  ||||||| |||||| | |||| ||| |||||||||||||||||    
T  33186097 tataaatgttcatgtataagctatttctattacagaagataaaataaggtcgaattgtttttatacaagttataagttgtttt 33186015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 341
Target Start/End: Original strand, 43333625 - 43333707
Alignment:
Q  259 atcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttg 341  Q
    |||||||| ||||||||| || || |||||||| || ||||   ||||||||||||||||  ||||||||||| |||||||||    
T  43333625 atcatatatgtgttcatgtataagttatttctagaagaaaatataaaataaagtcgaactggtttcatataagctataagttg 43333707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 347
Target Start/End: Complemental strand, 46980275 - 46980185
Alignment:
Q  257 ttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||||||||||   |||||| || | ||| |||| ||||||  ||||||||| | |||| |||||||||||||||||| |||||||||    
T  46980275 ttatcatataagtgcatatgcataagttgtttttatatcaaaagataaaataaagacaaactgttttcatataagttataaattgttttca 46980185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 347
Target Start/End: Complemental strand, 28467420 - 28467363
Alignment:
Q  290 tataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||||||||  ||||||||||| || |||||||||||||| || ||||||||||||    
T  28467420 tataacaaaagataaaataaagtcaaattattttcatataagctacaagttgttttca 28467363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 346
Target Start/End: Complemental strand, 36151627 - 36151562
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttc 346  Q
    ||||||||| ||||||||||  ||||||||||| || | ||||| |||||||||||| ||||||||    
T  36151627 agctatttcaataacaaaagataaaataaagtcaaattgttttcgtataagttataaattgttttc 36151562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 337
Target Start/End: Complemental strand, 44936709 - 44936656
Alignment:
Q  284 tatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataa 337  Q
    |||||||||||||||||  || |||||||| ||||||||||||||||| |||||    
T  44936709 tatttctataacaaaagataagataaagtcaaactattttcatataagctataa 44936656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 337
Target Start/End: Complemental strand, 45999427 - 45999354
Alignment:
Q  264 ataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataa 337  Q
    ||||||| ||||| || ||||||||||||||||||||  || |||||||| ||||  ||||||||||| |||||    
T  45999427 ataagtgctcatgtataagctatttctataacaaaagataagataaagtcaaactgctttcatataagctataa 45999354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 347
Target Start/End: Original strand, 16322799 - 16322863
Alignment:
Q  283 ctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||| |||| ||||||  |||||| |||| ||||||||||||| |||||||||| ||||||||    
T  16322799 ctatttttatatcaaaagataaaatatagtcaaactattttcatagaagttataagctgttttca 16322863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 329
Target Start/End: Original strand, 23895252 - 23895332
Alignment:
Q  249 ataagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatata 329  Q
    |||||| ||||||||||||||  | ||| || ||||||||||||||||||||  |||||||| || |||| || |||||||    
T  23895252 ataagcccttatcatataagttattatgtataagctatttctataacaaaagataaaataaattcaaactgttctcatata 23895332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 344
Target Start/End: Complemental strand, 30259634 - 30259546
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttt 344  Q
    ||||||||| ||||| | |||||  |||||||||||||||||||   ||||||||||| ||||  ||| ||||||| |||||| |||||    
T  30259634 cttatcatagaagtgcttatgcacaagctatttctataacaaaatataaaataaagtcaaactgctttgatataagctataagctgttt 30259546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 327
Target Start/End: Complemental strand, 42352026 - 42351982
Alignment:
Q  283 ctatttctataacaaaaggaaaaataaagtcgaactattttcata 327  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||    
T  42352026 ctatttctataacaaaagttaaaataaagtcaaactattttcata 42351982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 17420153 - 17420216
Alignment:
Q  283 ctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttc 346  Q
    |||||| ||||| |||||  ||||||||||||||| ||||||||||||| |||||  |||||||    
T  17420153 ctatttttataagaaaagataaaataaagtcgaacaattttcatataagctataaactgttttc 17420216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 347
Target Start/End: Complemental strand, 17423061 - 17422994
Alignment:
Q  281 agctatttctataacaaaagga-aaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||| |||||||||||||| || ||||||||||| | ||  ||||||||||| |||||||||||||||    
T  17423061 agctttttctataacaaaacgataaaataaagtcaagctgatttcatataagctataagttgttttca 17422994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 332
Target Start/End: Complemental strand, 30815757 - 30815706
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagt 332  Q
    |||| |||||||||||||||  ||||||||||  ||||||||||||||||||    
T  30815757 agctttttctataacaaaagataaaataaagttaaactattttcatataagt 30815706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 347
Target Start/End: Complemental strand, 48830195 - 48830132
Alignment:
Q  284 tatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||||| || ||||  ||||||||||| ||||||||||||||||| |||||  ||||||||    
T  48830195 tatttctattaccaaagataaaataaagtcaaactattttcatataagctataaactgttttca 48830132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 347
Target Start/End: Original strand, 49517021 - 49517084
Alignment:
Q  284 tatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||||||||||||||  ||||||||||| || | ||||||| |||| |||||| ||||||||    
T  49517021 tatttctataacaaaagataaaataaagtcaaattgttttcatttaagctataagctgttttca 49517084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 356
Target Start/End: Original strand, 30285840 - 30285914
Alignment:
Q  282 gctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatc 356  Q
    |||||||||||||||||||  ||||||||||| | | |||||||||||| || ||  ||||||||| || |||||    
T  30285840 gctatttctataacaaaagttaaaataaagtcaatcaattttcatataaattttactttgttttcataaactatc 30285914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 347
Target Start/End: Complemental strand, 33527269 - 33527203
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||||||| ||||||||  |||||| |||| |||| |||||||||||  |||||| ||||||||    
T  33527269 agctatttctaaaacaaaagataaaatacagtcaaactgttttcatataatctataagctgttttca 33527203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 346
Target Start/End: Original strand, 34380368 - 34380458
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttc 346  Q
    ||||||||| ||||| | | |||| ||||||||||| ||||||||  | ||||||||| |||| ||| ||||||  ||||| |||||||||    
T  34380368 cttatcatagaagtgcttaagcataagctatttctaaaacaaaagatacaataaagtcaaactgtttgcatatacattatatgttgttttc 34380458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 343
Target Start/End: Original strand, 36602714 - 36602800
Alignment:
Q  257 ttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgtt 343  Q
    |||||||||||||| | ||| || |||||| |||| ||||| ||  ||||||||||| ||  |||||||| |||||||||| |||||    
T  36602714 ttatcatataagtgattatgtataagctatatctacaacaatagataaaataaagtcaaatcattttcatctaagttataacttgtt 36602800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 347
Target Start/End: Complemental strand, 40304176 - 40304110
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||||| |||||||||||  |||||||| ||  | | ||||||||||||||||||| ||||||||    
T  40304176 agctatttatataacaaaagataaaataaaatcacattgttttcatataagttataagctgttttca 40304110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 357
Target Start/End: Original strand, 44940294 - 44940365
Alignment:
Q  284 tatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatcc 357  Q
    ||||| |||| ||||||  |||||||||||  ||| |||||| ||||||||||||||||||||| || ||||||    
T  44940294 tatttttatagcaaaagataaaataaagtc--actgttttcaaataagttataagttgttttcataatctatcc 44940365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 347
Target Start/End: Original strand, 48064261 - 48064323
Alignment:
Q  285 atttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||||| ||||||  ||||||||||  |||||||||  |||||||||||||||| |||||    
T  48064261 atttctatagcaaaagataaaataaagtaaaactatttttgtataagttataagttgatttca 48064323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 339
Target Start/End: Complemental strand, 1393171 - 1393083
Alignment:
Q  250 taagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagt 339  Q
    ||||||||||| ||| ||||||| ||  || |||||||| |||||||||||  ||||||||||  | || ||||||| ||||||||||||    
T  1393171 taagctcttatgatacaagtgtt-atatataagctatttatataacaaaagttaaaataaagtaaatctgttttcatgtaagttataagt 1393083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 346
Target Start/End: Original strand, 4200145 - 4200242
Alignment:
Q  249 ataagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttc 346  Q
    |||||| |||||||| |||||||| ||  || || ||||| |||||||||||  ||||||||||| |  | |||||||||||| ||||  ||||||||    
T  4200145 ataagcacttatcatctaagtgtttatatataagttatttttataacaaaagataaaataaagtcaagttgttttcatataagctatatattgttttc 4200242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 356
Target Start/End: Original strand, 5150907 - 5150960
Alignment:
Q  303 aaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatc 356  Q
    ||||||||||| |||||||||||| |||||| ||| ||||||||| || |||||    
T  5150907 aaaataaagtcaaactattttcatttaagttgtaatttgttttcataagctatc 5150960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 326
Target Start/End: Complemental strand, 17631223 - 17631178
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcat 326  Q
    ||||||||||||||||||||  ||||||||||| |||| |||||||    
T  17631223 agctatttctataacaaaagataaaataaagtctaactgttttcat 17631178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 356
Target Start/End: Complemental strand, 23902151 - 23902114
Alignment:
Q  319 attttcatataagttataagttgttttcaaaacctatc 356  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  23902151 attttcatataagctataagttgttttcaaaagctatc 23902114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 27738297 - 27738236
Alignment:
Q  286 tttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||| ||||||||  ||||||||||| || | |||||||||||| ||||| |||||||||    
T  27738297 tttctacaacaaaagataaaataaagtcaaattgttttcatataagctataatttgttttca 27738236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 356
Target Start/End: Complemental strand, 27887218 - 27887165
Alignment:
Q  303 aaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatc 356  Q
    ||||||||||| ||| |||| |||||||| ||||||||||||||| || |||||    
T  27887218 aaaataaagtcaaacaatttccatataagctataagttgttttcataaactatc 27887165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 347
Target Start/End: Original strand, 30371105 - 30371162
Alignment:
Q  290 tataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||||||||  |||||||| || || | |||||||||||| |||||||||||||||    
T  30371105 tataacaaaagataaaataaactcaaattgttttcatataagctataagttgttttca 30371162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 324
Target Start/End: Complemental strand, 37175990 - 37175949
Alignment:
Q  283 ctatttctataacaaaaggaaaaataaagtcgaactattttc 324  Q
    ||||||||||||| ||||| ||||||||||| ||||||||||    
T  37175990 ctatttctataaccaaaggtaaaataaagtcaaactattttc 37175949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 356
Target Start/End: Original strand, 45205038 - 45205091
Alignment:
Q  303 aaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatc 356  Q
    ||||||||||| |||||||| |||||||| || |||||||||||| || |||||    
T  45205038 aaaataaagtcaaactatttccatataagctagaagttgttttcataagctatc 45205091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 337
Target Start/End: Original strand, 52286601 - 52286682
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataa 337  Q
    ||||||||||||| | | ||| || || |||||||| ||||||||  ||||||||||  ||| ||||||||||||| |||||    
T  52286601 cttatcatataagcgcttatgaataagatatttctacaacaaaagataaaataaagttaaacaattttcatataagctataa 52286682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 5592785 - 5592741
Alignment:
Q  303 aaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||||||||||| | || ||||||||| |||||||||||||||    
T  5592785 aaaataaagtcgaattgttgtcatataagctataagttgttttca 5592741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 10581177 - 10581133
Alignment:
Q  303 aaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||||||| |||| ||||||| |||| |||||||||||||||    
T  10581177 aaaataaagtcaaacttttttcatttaagctataagttgttttca 10581133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 327
Target Start/End: Original strand, 26184701 - 26184745
Alignment:
Q  283 ctatttctataacaaaaggaaaaataaagtcgaactattttcata 327  Q
    |||||||||||| |||||| ||||||||||| || ||||||||||    
T  26184701 ctatttctataagaaaaggtaaaataaagtcaaattattttcata 26184745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 26293234 - 26293182
Alignment:
Q  275 tgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcata 327  Q
    ||||| ||||||||||||||||||| | ||||||||||| || | ||||||||    
T  26293234 tgcataagctatttctataacaaaaagtaaaataaagtcaaattgttttcata 26293182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 357
Target Start/End: Original strand, 33976674 - 33976710
Alignment:
Q  321 tttcatataagttataagttgttttcaaaacctatcc 357  Q
    ||||||||||||||||||||||||||  |||||||||    
T  33976674 tttcatataagttataagttgttttcttaacctatcc 33976710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 347
Target Start/End: Complemental strand, 37272694 - 37272642
Alignment:
Q  295 caaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||| ||||||||||| | || |||||||||||| |||||| ||||||||    
T  37272694 caaaaggtaaaataaagtcaatctgttttcatataagctataagctgttttca 37272642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 357
Target Start/End: Complemental strand, 39348077 - 39348013
Alignment:
Q  293 aacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatcc 357  Q
    ||||||||  ||||||||||| ||| ||| ||||| ||| ||||||||||||||| || ||||||    
T  39348077 aacaaaagataaaataaagtccaaccattctcatacaagctataagttgttttcataaactatcc 39348013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 356
Target Start/End: Complemental strand, 42556750 - 42556678
Alignment:
Q  284 tatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatc 356  Q
    ||||||||| |||||||   ||||||| || ||||| ||| ||||||| ||||||||||||||| || |||||    
T  42556750 tatttctatgacaaaagatgaaataaaatcaaactacttttatataagctataagttgttttcataagctatc 42556678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 347
Target Start/End: Original strand, 48282056 - 48282148
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaagga-aaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||||||||||| | ||| |  |||||||||||||| | || || ||||||||||| |||||||||| | |||||| |||  ||||||||    
T  48282056 cttatcatataagtgcttatgtaaaagctatttctataaaagaaagataaaataaagtcaaactattttcctttaagttttaaactgttttca 48282148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 9e-18; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 251 - 357
Target Start/End: Complemental strand, 17952853 - 17952747
Alignment:
Q  251 aagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaa 350  Q
    |||| ||||||||||||| | | ||  || ||||||||||||||||||||  ||||||||||| ||||||||||||||||| || ||| |||||||| ||    
T  17952853 aagcacttatcatataagagcttatatataagctatttctataacaaaagataaaataaagtcaaactattttcatataagctacaagatgttttcataa 17952754  T
Q  351 cctatcc 357  Q
     ||||||    
T  17952753 gctatcc 17952747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 343
Target Start/End: Complemental strand, 31740081 - 31740019
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgtt 343  Q
    ||||||||||||||| ||||  ||||||||||| ||||||||||||||||| |||||||||||    
T  31740081 agctatttctataactaaagataaaataaagtcaaactattttcatataagctataagttgtt 31740019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 250 - 347
Target Start/End: Original strand, 37053511 - 37053608
Alignment:
Q  250 taagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||| ||||||||||||||| | ||| ||   |||||||||||||| ||   ||||||||||| |||| ||||||||||||||||||||| ||||||    
T  37053511 taagcacttatcatataagtgcttatgtatagactatttctataacagaaaataaaataaagtcaaactgttttcatataagttataagtttttttca 37053608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 315
Target Start/End: Original strand, 13864577 - 13864632
Alignment:
Q  260 tcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcga 315  Q
    ||||||||||||| ||| || ||||||||||||||||||||| |||||||||||||    
T  13864577 tcatataagtgtttatgtataagctatttctataacaaaaggtaaaataaagtcga 13864632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 357
Target Start/End: Original strand, 28933753 - 28933848
Alignment:
Q  262 atataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatcc 357  Q
    ||||||||| ||||| || |||||||| |||||||||||  ||||| || || || ||||||||| |||||||||| ||||||||| || ||||||    
T  28933753 atataagtgctcatgtataagctatttatataacaaaagataaaatcaaatcaaattattttcatttaagttataaattgttttcataagctatcc 28933848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 357
Target Start/End: Original strand, 32694130 - 32694236
Alignment:
Q  250 taagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaa 349  Q
    ||||| |||||||||||||| || ||| || ||||||||||||| ||||||  |||||||| ||  |||||||| |||||| ||||||||||||| || |    
T  32694130 taagcgcttatcatataagtatt-atgtataagctatttctatatcaaaagataaaataaaatcagactatttttatataatttataagttgtttgcata 32694228  T
Q  350 acctatcc 357  Q
    | ||||||    
T  32694229 agctatcc 32694236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 291 - 356
Target Start/End: Original strand, 14666506 - 14666571
Alignment:
Q  291 ataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatc 356  Q
    ||||||||||  ||||||||||| ||||  ||||||||||||||||||||||||||| || |||||    
T  14666506 ataacaaaagataaaataaagtcaaactgatttcatataagttataagttgttttcacaagctatc 14666571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 9478222 - 9478302
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttata 336  Q
    ||||||||||||||||| ||| || ||||||||||||||||  ||  |||||||| || || |||||||||||||| ||||    
T  9478222 cttatcatataagtgtttatgtataagctatttctataacagtagataaaataaactcaaaatattttcatataagctata 9478302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 345
Target Start/End: Original strand, 25609713 - 25609808
Alignment:
Q  249 ataagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgtttt 345  Q
    ||||||||||| || ||||||| | ||| || |||||||||||||| |||||  ||||||||||| |  ||||||| |||||| |||||||||||||    
T  25609713 ataagctctta-cacataagtgcttatgtataagctatttctataagaaaagataaaataaagtcaatttattttcgtataagctataagttgtttt 25609808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 256 - 343
Target Start/End: Complemental strand, 43431591 - 43431506
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgtt 343  Q
    ||||||||||||||||| ||| || || |||||| ||||||||||  ||| |||||||||  |  |||||||||||||||||||||||    
T  43431591 cttatcatataagtgttaatgtataagttatttcaataacaaaagataaagtaaagtcga--ttgtttcatataagttataagttgtt 43431506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 347
Target Start/End: Original strand, 3673734 - 3673821
Alignment:
Q  260 tcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||||||| | ||| || || ||||||||||||||||   ||||||||||  || | ||||||||||||||||||||| ||||||    
T  3673734 tcatataagtgcttatgtattagttatttctataacaaaatataaaataaagttaaattgttttcatataagttataagtttttttca 3673821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 356
Target Start/End: Original strand, 6988068 - 6988138
Alignment:
Q  286 tttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatc 356  Q
    |||||||||||||||  ||||||||||| || ||||||| ||  |||||||||||||||||| || |||||    
T  6988068 tttctataacaaaagataaaataaagtcaaattattttcttactagttataagttgttttcataagctatc 6988138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 347
Target Start/End: Complemental strand, 9878804 - 9878738
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||||||||||||||||  |||||||| || ||||||||| | ||| | |||||||||||||||    
T  9878804 agctatttctataacaaaagataaaataaactcaaactatttttacatatgctataagttgttttca 9878738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 346
Target Start/End: Complemental strand, 28803653 - 28803563
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttc 346  Q
    ||||||||||||||| | ||  || || |||||| ||||||||||  ||||||||||| ||||  ||||||||||| || |||||||||||    
T  28803653 cttatcatataagtgcttatatataagttatttcgataacaaaagataaaataaagtcaaactgatttcatataagctacaagttgttttc 28803563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 337
Target Start/End: Original strand, 33192143 - 33192197
Alignment:
Q  283 ctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataa 337  Q
    |||||||||||||| |||  ||||||||||| |||| ||||||||||||||||||    
T  33192143 ctatttctataacataagataaaataaagtcaaactgttttcatataagttataa 33192197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 350
Target Start/End: Original strand, 5133720 - 5133789
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaa 350  Q
    ||||||||||||||||||||  |||||||||   |||| |||| ||||||| |||||| |||||||||||    
T  5133720 agctatttctataacaaaagataaaataaagataaactgtttttatataagatataagctgttttcaaaa 5133789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 347
Target Start/End: Complemental strand, 11344425 - 11344340
Alignment:
Q  262 atataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||||| | |||||| || |||||||||||||||||  |||| |||||| || | |||||||| ||| ||||| |||||||||    
T  11344425 atataagtgcttatgcataagatatttctataacaaaagataaaagaaagtcaaattgttttcatacaagctataaattgttttca 11344340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 356
Target Start/End: Original strand, 11513817 - 11513921
Alignment:
Q  249 ataagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaa 348  Q
    |||||| ||||||||||||| ||| ||| || || |||| |   ||||||||  ||||||||||| || | |||||||||||| |||||||||||||||     
T  11513817 ataagcacttatcatataagggtttatgtataagttattac---aacaaaagataaaataaagtcaaattgttttcatataagctataagttgttttcat 11513913  T
Q  349 aacctatc 356  Q
    || |||||    
T  11513914 aagctatc 11513921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 347
Target Start/End: Original strand, 33942096 - 33942164
Alignment:
Q  278 atgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||||||||||| | ||||||  ||||||||||| |||| ||||||| |||| |||||||||||||||    
T  33942096 atgagctatttcta-atcaaaagataaaataaagtcaaactgttttcatgtaagctataagttgttttca 33942164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 356
Target Start/End: Complemental strand, 5867338 - 5867238
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctat 355  Q
    |||||||||||||| || |||  | ||||||||||| |||||||  | |||||||||  || | |||||| ||||||| ||||||||||||| || ||||    
T  5867338 cttatcatataagtatttatgtctaagctatttctaaaacaaaaaaagaaataaagtaaaagtgttttcacataagttttaagttgttttcataagctat 5867239  T
Q  356 c 356  Q
    |    
T  5867238 c 5867238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 356
Target Start/End: Original strand, 10143123 - 10143195
Alignment:
Q  284 tatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatc 356  Q
    |||||||||||||||||  ||||| ||||| |||| |||| ||||||| |||||||| |||||| || |||||    
T  10143123 tatttctataacaaaagataaaattaagtcaaactgtttttatataagctataagtttttttcataagctatc 10143195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 347
Target Start/End: Original strand, 10769690 - 10769757
Alignment:
Q  282 gctatttctataacaaaaggaaaaataaagtcgaactattttcatata--agttataagttgttttca 347  Q
    |||||||||||||||||||| || |||||||| |||| || | |||||  ||||||||||||||||||    
T  10769690 gctatttctataacaaaaggtaacataaagtcaaactgttctaatataagagttataagttgttttca 10769757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 337
Target Start/End: Complemental strand, 18962184 - 18962104
Alignment:
Q  257 ttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataa 337  Q
    ||||||| |||||| | ||| || |||||||| |||||||||||  ||||||||||  |||| |||||||||||| |||||    
T  18962184 ttatcatgtaagtgcttatgtattagctatttttataacaaaagataaaataaagttaaactgttttcatataagctataa 18962104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 347
Target Start/End: Complemental strand, 35755642 - 35755558
Alignment:
Q  263 tataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||||||| ||| || ||||||||||||||  |||   ||||||||||| || | ||||||| |||| |||||||||||||||    
T  35755642 tataagtgtttatgtataagctatttctataatcaaatagaaaataaagtcaaattgttttcatgtaagctataagttgttttca 35755558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 345
Target Start/End: Original strand, 37474688 - 37474768
Alignment:
Q  265 taagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgtttt 345  Q
    |||||||| |||||| | ||||||| |||||||||   ||||||||||||| || |||||||||||  ||||| |||||||    
T  37474688 taagtgtttatgcataaactatttcgataacaaaaaataaaataaagtcgatctgttttcatataaactataaattgtttt 37474768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 357
Target Start/End: Original strand, 29300594 - 29300669
Alignment:
Q  282 gctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatcc 357  Q
    |||||||||| || |||||  |||||||||  ||| | ||||||| |||||||||||||||||||| || ||||||    
T  29300594 gctatttctacaataaaagataaaataaaggtgaattgttttcatgtaagttataagttgttttcataagctatcc 29300669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 29430671 - 29430765
Alignment:
Q  248 tataagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgtt 343  Q
    |||||||  |||||||| ||| ||| ||| || ||||||||||||||||||| |  |||||||||| |||| ||||| |||||| |||||| ||||    
T  29430671 tataagcgtttatcatacaagggtttatgtataagctatttctataacaaaa-gttaaataaagtcaaactgttttcttataagctataagctgtt 29430765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 357
Target Start/End: Complemental strand, 34055022 - 34054947
Alignment:
Q  282 gctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatcc 357  Q
    |||||||||||||||||||  ||||||||| | |||| ||| |||||| | |||||| |||||||| || ||||||    
T  34055022 gctatttctataacaaaagataaaataaaggcaaactgtttacatatatgatataaggtgttttcataagctatcc 34054947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 331
Target Start/End: Original strand, 14209201 - 14209275
Alignment:
Q  257 ttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataag 331  Q
    ||||||||||||||||  ||  | ||||||||| ||||||||||  |||||||| || |||| ||||||||||||    
T  14209201 ttatcatataagtgtttctgtctaagctatttcaataacaaaagataaaataaattcaaactgttttcatataag 14209275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 331
Target Start/End: Complemental strand, 33267662 - 33267588
Alignment:
Q  257 ttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataag 331  Q
    |||||||||||||| | ||| || | ||||||||||||||||  | ||||||||||  |||| ||||||||||||    
T  33267662 ttatcatataagtgcttatgtataatctatttctataacaaacagtaaaataaagttaaactgttttcatataag 33267588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 347
Target Start/End: Original strand, 37276722 - 37276760
Alignment:
Q  309 aagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||| |||| ||||||||||||||||||||||||||||    
T  37276722 aagtcaaactgttttcatataagttataagttgttttca 37276760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 347
Target Start/End: Original strand, 42907307 - 42907373
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||||||||||||| ||| |||||||||||  || | ||||| | |||| |||||||||||||||    
T  42907307 agctatttctataacagaagaaaaaataaagttaaattgttttcgtttaagctataagttgttttca 42907373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 313
Target Start/End: Complemental strand, 43456877 - 43456775
Alignment:
Q  216 ccctgtttagataaacaacctaattaagcacttata-----agctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaa 310  Q
    |||||||| |||||| ||| ||||||||||||||||     |||  |||||| ||||||| | ||| || |||| ||| ||||||||||||||| |||||    
T  43456877 ccctgtttcgataaaaaacttaattaagcacttatagcataagcatttatcacataagtgctaatgtataagctttttttataacaaaaggaaatataaa 43456778  T
Q  311 gtc 313  Q
    |||    
T  43456777 gtc 43456775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 341
Target Start/End: Complemental strand, 3423915 - 3423830
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttg 341  Q
    ||||||||| ||||||| ||| || || ||||| | || ||||||  ||||||||||| || |||||||||||||  |||||||||    
T  3423915 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 3423830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 356
Target Start/End: Complemental strand, 5043660 - 5043607
Alignment:
Q  303 aaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatc 356  Q
    ||||||||||| |||| |||||||||||| || |||||||||||| || |||||    
T  5043660 aaaataaagtcaaactgttttcatataagctagaagttgttttcataagctatc 5043607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 35329965 - 35329884
Alignment:
Q  257 ttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataag 338  Q
    |||||||||||||||| |||||| | ||||||| |||||| |||  ||||||||||| | ||  ||||| ||||| ||||||    
T  35329965 ttatcatataagtgtttatgcataaactatttccataacataagataaaataaagtcaagctgctttcacataagctataag 35329884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 35539693 - 35539742
Alignment:
Q  303 aaaataaagtcgaactattttcatataagttataagttgttttcaaaacc 352  Q
    |||||||| || |||||||||||||||||||||||| | |||||| ||||    
T  35539693 aaaataaaatcaaactattttcatataagttataagctattttcataacc 35539742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 356
Target Start/End: Complemental strand, 36863725 - 36863672
Alignment:
Q  303 aaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatc 356  Q
    ||||||||||| ||| ||||| ||||||||||||| ||||||||| || |||||    
T  36863725 aaaataaagtcaaacaatttttatataagttataaattgttttcataagctatc 36863672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 346
Target Start/End: Complemental strand, 37292457 - 37292404
Alignment:
Q  293 aacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttc 346  Q
    ||||||||  ||||||||||  ||||||||||||||||| ||| ||||||||||    
T  37292457 aacaaaagataaaataaagtaaaactattttcatataagctattagttgttttc 37292404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 357
Target Start/End: Original strand, 43199365 - 43199438
Alignment:
Q  284 tatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatcc 357  Q
    |||||||| ||||||||  ||||||||||  || ||| ||| |||||| ||||||||||||||| || ||||||    
T  43199365 tatttctacaacaaaagataaaataaagttaaattatcttcgtataagctataagttgttttcataaactatcc 43199438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 328
Target Start/End: Complemental strand, 1939451 - 1939407
Alignment:
Q  284 tatttctataacaaaaggaaaaataaagtcgaactattttcatat 328  Q
    |||||||||||||||||  ||||||||||  ||||||||||||||    
T  1939451 tatttctataacaaaagataaaataaagtgaaactattttcatat 1939407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 344
Target Start/End: Complemental strand, 29503235 - 29503142
Alignment:
Q  249 ataagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttt 344  Q
    |||||| ||||| ||| ||||||| ||| ||  | |||||||||||||| |   ||||||||||| ||||||||||| | |||||||||| |||||    
T  29503235 ataagcacttattatagaagtgtttatgtatatgatatttctataacaagat--aaaataaagtcaaactattttcaaagaagttataagatgttt 29503142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 38239705 - 38239641
Alignment:
Q  249 ataagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtc 313  Q
    |||||| || ||||| |||||||| ||| || ||||||||||||||||||||  ||||| |||||    
T  38239705 ataagcactcatcatgtaagtgtttatgtataagctatttctataacaaaagataaaatcaagtc 38239641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 347
Target Start/End: Original strand, 42621617 - 42621645
Alignment:
Q  319 attttcatataagttataagttgttttca 347  Q
    |||||||||||||||||||||||||||||    
T  42621617 attttcatataagttataagttgttttca 42621645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 348
Target Start/End: Original strand, 5373148 - 5373240
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaa 348  Q
    |||||||| |||||| | ||| ||  |||||||||||||||||||  ||||||||||| ||  ||||| ||||||||||||||||||||||||    
T  5373148 cttatcatgtaagtgcttatgtatatgctatttctataacaaaagataaaataaagtccaaacatttttatataagttataagttgttttcaa 5373240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 256 - 347
Target Start/End: Original strand, 49060463 - 49060554
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||||||||||| || ||| || |||||||||||||||||||   ||||||||||| || |||||| ||||||| |||||||| ||||||    
T  49060463 cttatcatataagtatttatgtataagctatttctataacaaaaaataaaataaagtcaaattatttttatataagctataagttattttca 49060554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 356
Target Start/End: Complemental strand, 30456572 - 30456497
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatc 356  Q
    ||||||||||| ||||||||  ||||||||||| || | |||||||||||||||||||| ||||||| || |||||    
T  30456572 agctatttctaaaacaaaagataaaataaagtcaaattgttttcatataagttataagtggttttcataaactatc 30456497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 338
Target Start/End: Original strand, 2894748 - 2894822
Alignment:
Q  264 ataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataag 338  Q
    ||||||||||||| || ||||||||||||||||||||  ||| |||||| ||||| ||||||  |||||||||||    
T  2894748 ataagtgttcatgtataagctatttctataacaaaagataaattaaagttgaactgttttcaagtaagttataag 2894822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 281 - 347
Target Start/End: Complemental strand, 5006631 - 5006565
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||| ||||||||||||  ||||||||||| |||| |||||||||||| ||||| |||||||||    
T  5006631 agctattcctataacaaaagataaaataaagtcaaactgttttcatataaggtataaattgttttca 5006565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 356
Target Start/End: Complemental strand, 27481440 - 27481341
Alignment:
Q  257 ttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatc 356  Q
    |||| ||||||||||| ||| || |||||||||||||||||| |  ||||  ||||| |||| ||| |||||||| |||||||| |||||| || |||||    
T  27481440 ttattatataagtgtttatgtataagctatttctataacaaaggataaaacgaagtcaaactgtttccatataagctataagttattttcataagctatc 27481341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 335
Target Start/End: Original strand, 31341069 - 31341196
Alignment:
Q  213 aggccctgtttagataaacaacctaattaagcacttat-----aagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaat 307  Q
    ||||||||||| |||||||||| |||| |||| |||||     |||| |||||||| ||| || | ||| || |||||||| |||||||||||  |||||    
T  31341069 aggccctgtttggataaacaacttaatcaagcgcttattgcataagcgcttatcatctaaatgcttatgtataagctatttgtataacaaaagataaaat 31341168  T
Q  308 aaagtcgaactattttcatataagttat 335  Q
    |||||| ||||  ||| |||||||||||    
T  31341169 aaagtcaaactggttttatataagttat 31341196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 347
Target Start/End: Original strand, 46081981 - 46082048
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaa-ctattttcatataagttataagttgttttca 347  Q
    ||||||||||||||| ||||  |||| |||||| || || ||||||||||||||||||||||||||||    
T  46081981 agctatttctataacgaaagttaaaacaaagtcaaaactgttttcatataagttataagttgttttca 46082048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 355
Target Start/End: Complemental strand, 3802261 - 3802187
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctat 355  Q
    |||||||||||||| |||||| ||||||||||| ||   ||||||||||| ||||||| |||||| |||| ||||    
T  3802261 agctatttctataataaaaggtaaaataaagtcaaatcgttttcatataaattataagctgtttttaaaagctat 3802187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 356
Target Start/End: Original strand, 27492720 - 27492818
Alignment:
Q  258 tatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatc 356  Q
    ||||||||||||  | ||| || | ||||||||||||||||||   ||||||| || |||| ||||||||||||| ||||| |||||||| || |||||    
T  27492720 tatcatataagttcttatgtataaactatttctataacaaaagttcaaataaaatcaaacttttttcatataagtaataagatgttttcataagctatc 27492818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 338
Target Start/End: Original strand, 35536030 - 35536112
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataag 338  Q
    ||||||||||||  | | ||| || |||||||||||||||| |||  ||||||||||| || | |||||||||||||||||||    
T  35536030 cttatcatataaaggcttatgtataagctatttctataacataagataaaataaagtcaaattgttttcatataagttataag 35536112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 347
Target Start/End: Original strand, 47004011 - 47004101
Alignment:
Q  257 ttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||||||||||||| ||   | ||||||||||||||||| ||  ||||||||||| ||||||||| |||| |  |||||| ||||||||    
T  47004011 ttatcatataagtgtttatatgtaagctatttctataacaatagataaaataaagtcaaactatttttatatgaactataagctgttttca 47004101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 347
Target Start/End: Complemental strand, 9527211 - 9527146
Alignment:
Q  282 gctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||| |||||||||||||  | ||||||||| |||| |||||||||||  |||||||||||||||    
T  9527211 gctatatctataacaaaagatataataaagtcaaactgttttcatataaactataagttgttttca 9527146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 334
Target Start/End: Complemental strand, 45593865 - 45593788
Alignment:
Q  257 ttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagtta 334  Q
    ||||||||||| || | ||| || |||||||||| ||||||||   ||||||||||| |||| |||||||||||||||    
T  45593865 ttatcatataaatgcttatgtataagctatttctgtaacaaaacataaaataaagtcaaactgttttcatataagtta 45593788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 347
Target Start/End: Original strand, 1417214 - 1417278
Alignment:
Q  283 ctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||| |||||||||||  ||||||||||| || | ||||||||||||  ||||||||||||||    
T  1417214 ctatttatataacaaaagataaaataaagtcaaattgttttcatataagcaataagttgttttca 1417278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 347
Target Start/End: Complemental strand, 28340496 - 28340452
Alignment:
Q  303 aaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||||||| |||| ||||||| ||||||||||||||||||||    
T  28340496 aaaataaagtcaaactgttttcatgtaagttataagttgttttca 28340452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 356
Target Start/End: Original strand, 44241783 - 44241882
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctat 355  Q
    ||||||||||||||||  ||| || || |||||||||||||| ||  ||||||||||  |||||||||  |||||  ||||||||||||||| || ||||    
T  44241783 cttatcatataagtgtgtatgtataagttatttctataacaacagataaaataaagt-taactatttttgtataacctataagttgttttcataagctat 44241881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 24975827 - 24975902
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataag 331  Q
    ||||||||||||||| | ||| || | ||| ||||||||||||||  ||||||||| |||||| |||| |||||||    
T  24975827 cttatcatataagtgctgatgtataatctacttctataacaaaagataaaataaaggcgaactgtttttatataag 24975902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 357
Target Start/End: Complemental strand, 40689107 - 40689032
Alignment:
Q  282 gctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatcc 357  Q
    |||||||||||| ||||||  ||||||||||  || |||||||||||||| |||||| ||| |||| || ||||||    
T  40689107 gctatttctatagcaaaagataaaataaagttaaattattttcatataagctataagctgtgttcataagctatcc 40689032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 356
Target Start/End: Original strand, 44910552 - 44910627
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatc 356  Q
    ||||||||||||| ||||||  ||||||||||| |||| |||||| | ||| || |||||||||||| || |||||    
T  44910552 agctatttctatatcaaaagagaaaataaagtcaaacttttttcacacaagctaaaagttgttttcataaactatc 44910627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 322
Target Start/End: Complemental strand, 46223212 - 46223153
Alignment:
Q  263 tataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattt 322  Q
    |||||||||| ||| || ||||||||| ||||||||||  ||| ||||||||||||||||    
T  46223212 tataagtgtttatgtataagctatttccataacaaaagataaattaaagtcgaactattt 46223153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 327
Target Start/End: Original strand, 3241389 - 3241435
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcata 327  Q
    |||||||||||||||||||  |||||||||||| |||| ||||||||    
T  3241389 agctatttctataacaaaataaaaaataaagtcaaactgttttcata 3241435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 3610883 - 3610797
Alignment:
Q  260 tcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttc 346  Q
    ||||||||||| | ||| || ||||||||||| ||||||||  ||||| ||| | |||| ||||  |||||| ||||||||||||||    
T  3610883 tcatataagtgcttatgtataagctatttctacaacaaaagataaaatgaaggcaaactgttttggtataagctataagttgttttc 3610797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 7244626 - 7244696
Alignment:
Q  257 ttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcata 327  Q
    |||||||||||||| | ||| || ||||||||||||| ||||||  |||| |||||| |||| ||||||||    
T  7244626 ttatcatataagtgcttatgtataagctatttctatatcaaaagataaaagaaagtcaaactgttttcata 7244696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 357
Target Start/End: Original strand, 31338478 - 31338532
Alignment:
Q  303 aaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatcc 357  Q
    ||||||||||| |||| |||| |||||||||||||||||||| || || ||||||    
T  31338478 aaaataaagtcaaactgtttttatataagttataagttgtttccataaactatcc 31338532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 345
Target Start/End: Original strand, 33894549 - 33894634
Alignment:
Q  259 atcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgtttt 345  Q
    ||||| |||||| | ||| || ||||||||||||||||||||  ||||| ||||| |||| |||||||||||| | || ||||||||    
T  33894549 atcatgtaagtgcttatgtataagctatttctataacaaaagataaaat-aagtcaaactgttttcatataagctttatgttgtttt 33894634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 337
Target Start/End: Complemental strand, 39551696 - 39551614
Alignment:
Q  255 tcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataa 337  Q
    ||||||||||||||| || | | || ||||||||||||||||||||  | | ||||||  |||| |||||||||||| |||||    
T  39551696 tcttatcatataagtatttaagtataagctatttctataacaaaagatatactaaagtaaaactgttttcatataagctataa 39551614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 347
Target Start/End: Complemental strand, 45813302 - 45813236
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||||||||| ||||||  ||||||||||| |  | |||||||||||  |||||||||||||||    
T  45813302 agctatttctataccaaaagataaaataaagtcaacttgttttcatataatctataagttgttttca 45813236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 344
Target Start/End: Complemental strand, 1413190 - 1413137
Alignment:
Q  291 ataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttt 344  Q
    ||||||||||| |||||||||| ||||| |||||||||||  |||||| |||||    
T  1413190 ataacaaaaggtaaaataaagttgaacttttttcatataatctataagctgttt 1413137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 2223070 - 2223115
Alignment:
Q  255 tcttatcatataagtgttcatgcatgagctatttctataacaaaag 300  Q
    ||||||| |||||||||| ||| || ||||||||||||||||||||    
T  2223070 tcttatcgtataagtgtttatgtataagctatttctataacaaaag 2223115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 333
Target Start/End: Original strand, 19624177 - 19624226
Alignment:
Q  284 tatttctataacaaaaggaaaaataaagtcgaactattttcatataagtt 333  Q
    ||||||||||| | |||| ||||||||||  |||||||||||||||||||    
T  19624177 tatttctataagataaggcaaaataaagtaaaactattttcatataagtt 19624226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 347
Target Start/End: Original strand, 24895325 - 24895370
Alignment:
Q  302 aaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||| ||||||| || |||||||||||||| |||||||||||||||    
T  24895325 aaaagtaaagtcaaattattttcatataagctataagttgttttca 24895370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 347
Target Start/End: Original strand, 24909633 - 24909678
Alignment:
Q  302 aaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||| ||||||| || |||||||||||||| |||||||||||||||    
T  24909633 aaaagtaaagtcaaattattttcatataagctataagttgttttca 24909678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 347
Target Start/End: Original strand, 30496629 - 30496718
Alignment:
Q  258 tatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||| ||||||||| ||| || | |||||||||||||||||   ||||||||||| || | ||||| |||||  |||| ||||||||||    
T  30496629 tatcacataagtgtttatgtataaactatttctataacaaaatataaaataaagtcaaattgttttcgtataacctataggttgttttca 30496718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 346
Target Start/End: Complemental strand, 36874087 - 36874022
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttc 346  Q
    |||||||||||||| ||| |  |||||||| | ||| ||||||| |||||| ||||||||||||||    
T  36874087 agctatttctataagaaatgataaaataaatttgaattattttcttataagctataagttgttttc 36874022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 333
Target Start/End: Complemental strand, 39591586 - 39591537
Alignment:
Q  284 tatttctataacaaaaggaaaaataaagtcgaactattttcatataagtt 333  Q
    |||||||||||||||||  ||||||||||| || | ||||||||||||||    
T  39591586 tatttctataacaaaagataaaataaagtcaaattgttttcatataagtt 39591537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 356
Target Start/End: Original strand, 7623089 - 7623161
Alignment:
Q  284 tatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatc 356  Q
    ||||| |||||||||||| ||||||||||| |||| |||| ||||||| | |||| | |||||| || |||||    
T  7623089 tatttttataacaaaaggtaaaataaagtccaactctttttatataagctgtaagctattttcataaactatc 7623161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 25507331 - 25507363
Alignment:
Q  315 aactattttcatataagttataagttgttttca 347  Q
    ||||||||||||||||| |||||||||||||||    
T  25507331 aactattttcatataagctataagttgttttca 25507363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 25558279 - 25558247
Alignment:
Q  315 aactattttcatataagttataagttgttttca 347  Q
    ||||||||||||||||| |||||||||||||||    
T  25558279 aactattttcatataagctataagttgttttca 25558247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 347
Target Start/End: Complemental strand, 25558477 - 25558445
Alignment:
Q  315 aactattttcatataagttataagttgttttca 347  Q
    ||||||||||||||||| |||||||||||||||    
T  25558477 aactattttcatataagctataagttgttttca 25558445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 45777284 - 45777228
Alignment:
Q  290 tataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttc 346  Q
    |||||||||||  ||||| ||||| |||| |||||||||||  ||||||||||||||    
T  45777284 tataacaaaagataaaattaagtcaaactgttttcatataaactataagttgttttc 45777228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 356
Target Start/End: Original strand, 7354131 - 7354227
Alignment:
Q  260 tcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatc 356  Q
    ||||| |||| |||||| || | ||||||||||||||||||  |||||||| |||||||||||||||||||| || ||| |||||||| || |||||    
T  7354131 tcatacaagttttcatgtataaactatttctataacaaaagataaaataaaatcgaactattttcatataagatacaagctgttttcataaactatc 7354227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 281 - 356
Target Start/End: Original strand, 1402944 - 1403019
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatc 356  Q
    ||||||||||||||||||||  ||||||||||  ||||||||||||||||| ||||| ||||||||| || |||||    
T  1402944 agctatttctataacaaaagataaaataaagttaaactattttcatataagctataaattgttttcataagctatc 1403019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 258 - 344
Target Start/End: Complemental strand, 10452505 - 10452419
Alignment:
Q  258 tatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttt 344  Q
    |||||||| |||| | ||| || |||||||||||||||||||   |||||||| || ||||||||||||||||| ||||||||||||    
T  10452505 tatcatatcagtgcttatgtataagctatttctataacaaaatataaaataaaatcaaactattttcatataagctataagttgttt 10452419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 257 - 346
Target Start/End: Original strand, 31420882 - 31420971
Alignment:
Q  257 ttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttc 346  Q
    |||| ||||||||||| ||  || |||||||||||||| ||| || |||||||| || ||||||||| ||||||| ||||||||||||||    
T  31420882 ttattatataagtgtttatttataagctatttctataataaatggtaaaataaaatcaaactatttttatataagatataagttgttttc 31420971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 358
Target Start/End: Original strand, 4006645 - 4006739
Alignment:
Q  264 ataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatccc 358  Q
    ||||||| | |||||| || ||||||||||||||| |  ||||||||||| || | |||| ||||||| ||||||||||||||| || |||||||    
T  4006645 ataagtgcttatgcataagatatttctataacaaatgataaaataaagtcaaattgtttttatataagctataagttgttttcataagctatccc 4006739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 216 - 357
Target Start/End: Original strand, 32975856 - 32976002
Alignment:
Q  216 ccctgtttagataaacaacctaattaagcacttata-----agctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaa 310  Q
    ||||||||||||||||||| |||||||||  |||||     ||| ||| ||||||||||||| ||| || || ||||||| ||||||||   ||||||||    
T  32975856 ccctgtttagataaacaacttaattaagcgtttatagcataagcgcttctcatataagtgtttatgtataagttatttctgtaacaaaatataaaataaa 32975955  T
Q  311 gtcgaactattttcatataagttataagttgttttcaaaacctatcc 357  Q
    ||| |||| |||  ||| |||  |||||||||||||| || ||||||    
T  32975956 gtcaaactgtttcaatagaagcaataagttgttttcataagctatcc 32976002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 347
Target Start/End: Original strand, 2514625 - 2514716
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||||| |||||| | ||| || |||||||||||||| |||||  ||||||||||| ||||| ||| |||| || |||||||| ||||||    
T  2514625 cttatcatgtaagtgcttatgtataagctatttctataataaaagataaaataaagtcaaactaattttatatgagctataagttattttca 2514716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 343
Target Start/End: Complemental strand, 2027528 - 2027466
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgtt 343  Q
    |||||||| |||||||||||  ||||||||||| ||||||||||||||||  |||||| ||||    
T  2027528 agctatttttataacaaaagataaaataaagtcaaactattttcatataacctataagctgtt 2027466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 347
Target Start/End: Complemental strand, 4247183 - 4247117
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||||||||||||||||  |||||| ||| |  || ||||||||||||||||||| ||||||||    
T  4247183 agctatttctataacaaaagataaaatagagttggtctgttttcatataagttataagctgttttca 4247117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 338
Target Start/End: Original strand, 10032494 - 10032576
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataag 338  Q
    |||||||||||| |||| ||| || |||||||| |||||||| |||  |||||||| | ||||| ||||||||||| ||||||    
T  10032494 cttatcatataaatgtttatgtataagctatttttataacaataggtgaaataaaggcaaactaatttcatataagctataag 10032576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 347
Target Start/End: Original strand, 2117352 - 2117417
Alignment:
Q  282 gctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||||||| ||||| |  |||| |||||| ||||||||||||||||  |||||||||||||||    
T  2117352 gctatttctatgacaaaggataaaacaaagtcaaactattttcatataatctataagttgttttca 2117417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 347
Target Start/End: Complemental strand, 3204687 - 3204598
Alignment:
Q  258 tatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||||||||| | | | || | ||| |||||||| |||||  |||||||||||||||| |||||||||||| || || |||||||||    
T  3204687 tatcatataagtgcttacgaataaactacttctataataaaagataaaataaagtcgaactgttttcatataagctagaaattgttttca 3204598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 343
Target Start/End: Original strand, 30865427 - 30865492
Alignment:
Q  278 atgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgtt 343  Q
    |||||||||||||||||||||||  ||||||||||| |||| |   |||||| |||||||||||||    
T  30865427 atgagctatttctataacaaaagataaaataaagtcaaactgtgaccatataggttataagttgtt 30865492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 347
Target Start/End: Complemental strand, 29274377 - 29274285
Alignment:
Q  255 tcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||||||| || || | ||| || ||||||||||||| ||||||  ||||||||||| || | |||||||||||| |||||  ||||||||    
T  29274377 tcttatcatagaaatgcttatgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagctataaactgttttca 29274285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 346
Target Start/End: Original strand, 31828996 - 31829040
Alignment:
Q  302 aaaaataaagtcgaactattttcatataagttataagttgttttc 346  Q
    ||||||||| || |||||||||||||||||||||||| |||||||    
T  31828996 aaaaataaaatcaaactattttcatataagttataagctgttttc 31829040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 346
Target Start/End: Original strand, 12757524 - 12757567
Alignment:
Q  303 aaaataaagtcgaactattttcatataagttataagttgttttc 346  Q
    ||||||||||| ||||| ||||||||||||||| ||||||||||    
T  12757524 aaaataaagtcaaactactttcatataagttatgagttgttttc 12757567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 346
Target Start/End: Complemental strand, 14656345 - 14656302
Alignment:
Q  303 aaaataaagtcgaactattttcatataagttataagttgttttc 346  Q
    ||||||||||| ||||| ||||||||||||||| ||||||||||    
T  14656345 aaaataaagtcaaactactttcatataagttatgagttgttttc 14656302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 325
Target Start/End: Complemental strand, 29958031 - 29957988
Alignment:
Q  282 gctatttctataacaaaaggaaaaataaagtcgaactattttca 325  Q
    ||||||| |||||||||||| |||||||||||||||| ||||||    
T  29958031 gctatttttataacaaaaggtaaaataaagtcgaactgttttca 29957988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 331
Target Start/End: Original strand, 32513752 - 32513822
Alignment:
Q  260 tcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataag 331  Q
    |||||| |||||| |||||| || ||||||||||||||||   ||||||||||| |||||||| ||||||||    
T  32513752 tcatattagtgtttatgcataagttatttctataacaaaa-ataaaataaagtcaaactatttccatataag 32513822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 345
Target Start/End: Complemental strand, 1810454 - 1810361
Alignment:
Q  249 ataagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgtttt 345  Q
    |||||| | ||||||||||||| | |||||  ||||||||||||||||||||  |||||||| |   | | |||||||||||| |||||| ||||||    
T  1810454 ataagcacctatcatataagtgcttatgcaaaagctatttctataacaaaagataaaataaaat---attgttttcatataagctataagctgtttt 1810361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 5328925 - 5328986
Alignment:
Q  284 tatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttc 346  Q
    |||||||||||||||||  ||||||||||| ||| ||||| |||||| ||||||| |||||||    
T  5328925 tatttctataacaaaagataaaataaagtcaaaccatttttatataa-ttataagctgttttc 5328986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 356
Target Start/End: Original strand, 1497943 - 1498004
Alignment:
Q  295 caaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatc 356  Q
    ||||||| ||||||||||| |||| ||||||||| |||||||||  ||||||| || |||||    
T  1497943 caaaaggtaaaataaagtcaaactgttttcatatgagttataagaagttttcataaactatc 1498004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 338
Target Start/End: Original strand, 10154169 - 10154226
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataag 338  Q
    |||| ||||||||  |||||  ||||||||||| |||| |||||||||||||||||||    
T  10154169 agctgtttctatagaaaaagataaaataaagtcaaactgttttcatataagttataag 10154226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 338
Target Start/End: Original strand, 24782007 - 24782064
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataag 338  Q
    ||||||||||||||||||||  ||||| || || || | |||||||||||||||||||    
T  24782007 agctatttctataacaaaagataaaatcaaatcaaattgttttcatataagttataag 24782064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 357
Target Start/End: Complemental strand, 28660879 - 28660806
Alignment:
Q  284 tatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatcc 357  Q
    ||||| |||||||| ||  ||||||||||  || ||||||||||||| |||||| ||||||||| || ||||||    
T  28660879 tatttttataacaatagataaaataaagttaaattattttcatataaattataaattgttttcataaactatcc 28660806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 357
Target Start/End: Complemental strand, 281970 - 281894
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatcc 357  Q
    ||||||| ||||||||||||  ||||||||||| |  | |||||||||||| |||||| ||| |||| || ||||||    
T  281970 agctattcctataacaaaagataaaataaagtcaacttgttttcatataagctataagctgtgttcataagctatcc 281894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 300
Target Start/End: Complemental strand, 2023812 - 2023732
Alignment:
Q  225 gataaacaacctaattaagcacttataa-----gctcttatcatataagtgttcatgcatgagctatttctataacaaaag 300  Q
    |||||||||| ||||||||||||||||      || ||||||||||||||||||||  || || |||||||||| ||||||    
T  2023812 gataaacaacttaattaagcacttatagtataggcacttatcatataagtgttcatatataagttatttctatagcaaaag 2023732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 3169392 - 3169312
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttata 336  Q
    ||||||||||||||| | |||  | | ||||||||||||||||||   ||||||| ||||||| |||||| ||||| ||||    
T  3169392 cttatcatataagtgcttatgtgtaacctatttctataacaaaagatgaaataaattcgaactgttttcacataagctata 3169312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 330
Target Start/End: Complemental strand, 3171560 - 3171504
Alignment:
Q  274 atgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataa 330  Q
    |||||| |||||||| |||||||||||  ||||| |||||||||| |||| ||||||    
T  3171560 atgcataagctatttttataacaaaagataaaattaagtcgaactgttttaatataa 3171504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 345
Target Start/End: Complemental strand, 6310342 - 6310282
Alignment:
Q  285 atttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgtttt 345  Q
    ||||||||||||||||   || ||||||| || | |||||||||||| |||||||||||||    
T  6310342 atttctataacaaaagatgaagtaaagtctaattgttttcatataagctataagttgtttt 6310282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 11363490 - 11363426
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgtttt 345  Q
    |||||||| || || |||||  ||||||||||  || ||||||||| ||||||||||||||||||    
T  11363490 agctatttttaaaagaaaagataaaataaagttaaattattttcatgtaagttataagttgtttt 11363426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 347
Target Start/End: Complemental strand, 33787865 - 33787801
Alignment:
Q  283 ctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||||||||||||||   |||| |||||| || |  |||||||||||||||||| ||||||||    
T  33787865 ctatttctataacaaaatataaaacaaagtcaaattgatttcatataagttataagctgttttca 33787801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 332
Target Start/End: Original strand, 22232741 - 22232825
Alignment:
Q  248 tataagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagt 332  Q
    |||||||||||||||||||| || ||||| || |||||||| ||||||||| |  ||||||||||| |||| |||||||||||||    
T  22232741 tataagctcttatcatataaatgctcatgtataagctatttatataacaaatgataaaataaagtcaaactgttttcatataagt 22232825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 347
Target Start/End: Original strand, 28306106 - 28306172
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||| |||||||||||| | ||||||||||| |||| ||||||||||||||| ||||||||||||    
T  28306106 agctatctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttca 28306172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 256 - 357
Target Start/End: Original strand, 38462204 - 38462305
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctat 355  Q
    ||||||||||||||||| ||  || ||||||||||||| ||||||  ||||||||||| |||| |||||||||| | |||||  |||||||| || ||||    
T  38462204 cttatcatataagtgtttatttataagctatttctataccaaaagataaaataaagtcaaactgttttcatatatgctataaactgttttcataagctat 38462303  T
Q  356 cc 357  Q
    ||    
T  38462304 cc 38462305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 356
Target Start/End: Original strand, 27792796 - 27792895
Alignment:
Q  257 ttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatc 356  Q
    |||||||||||||| | ||| || ||||||||| | ||||||||  ||||||| ||| ||||||||||||||||| |  |||||||||||| || |||||    
T  27792796 ttatcatataagtgcttatgtataagctatttcaaaaacaaaagataaaataaggtcaaactattttcatataagctgcaagttgttttcataaactatc 27792895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 357
Target Start/End: Complemental strand, 36646527 - 36646428
Alignment:
Q  258 tatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatcc 357  Q
    ||||||| ||||||| ||  || |||||||||||| |||||||  ||||||||||  || | |||||||||||||||||| ||||||||| || ||||||    
T  36646527 tatcatacaagtgttgatatataagctatttctatgacaaaagataaaataaagtataattgttttcatataagttataacttgttttcataagctatcc 36646428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 41028998 - 41028923
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataag 331  Q
    ||||||||||||||| | ||| || |||||||||||||||||||| |||||||||||| | || |||||| |||||    
T  41028998 cttatcatataagtgcttatgtataagctatttctataacaaaagaaaaaataaagtcaatctgttttcaaataag 41028923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 257 - 347
Target Start/End: Complemental strand, 43116574 - 43116484
Alignment:
Q  257 ttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||||| ||||||| |||  | ||||||||||||||||||||  ||||| || || ||| ||||||||||||| ||||||| |||||||    
T  43116574 ttatcatacaagtgtttatgtgtaagctatttctataacaaaagataaaatcaaatcaaacaattttcatataagctataagtcgttttca 43116484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 347
Target Start/End: Complemental strand, 24235802 - 24235739
Alignment:
Q  284 tatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||||||||||||||  || |||||||| ||||||||  ||||||| |||||||||||||||    
T  24235802 tatttctataacaaaagataatataaagtcaaactatttgaatataagctataagttgttttca 24235739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 333
Target Start/End: Complemental strand, 53736238 - 53736183
Alignment:
Q  278 atgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagtt 333  Q
    ||||| |||||||||||||||||  ||||||| ||| |||||||||||||||||||    
T  53736238 atgagttatttctataacaaaagataaaataatgtcaaactattttcatataagtt 53736183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 1395619 - 1395669
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataag 331  Q
    ||||||||||||||||||||  ||||||||||| || ||||||||||||||    
T  1395619 agctatttctataacaaaagataaaataaagtcaaattattttcatataag 1395669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 49587038 - 49586988
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataag 331  Q
    ||||||||||||||||||||  ||||||||||| |||| ||||||||||||    
T  49587038 agctatttctataacaaaagataaaataaagtcaaactgttttcatataag 49586988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 347
Target Start/End: Original strand, 237342 - 237411
Alignment:
Q  278 atgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||||||||||||||| |||  |||||||| |  || ||| ||||| ||||||||||||||||||||    
T  237342 atgagctatttctataacagaagataaaataaaataaaattatattcatgtaagttataagttgttttca 237411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 345
Target Start/End: Original strand, 28779327 - 28779368
Alignment:
Q  304 aaataaagtcgaactattttcatataagttataagttgtttt 345  Q
    |||||||||| ||||||||||||||||| |||||||||||||    
T  28779327 aaataaagtcaaactattttcatataagctataagttgtttt 28779368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 347
Target Start/End: Original strand, 37788786 - 37788874
Alignment:
Q  258 tatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||| ||||||| ||| || || ||||| |||||||||||  ||||||||||| || ||||||| |||||  |||||||||||||||    
T  37788786 tatcatacaagtgtttatgtataagttattt-tataacaaaagataaaataaagtccaattattttcgtataatctataagttgttttca 37788874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 357
Target Start/End: Complemental strand, 24887405 - 24887329
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatcc 357  Q
    ||||||||||||||||| ||  ||||||||||| |||| | |||||||||| || ||| |||||||| || ||||||    
T  24887405 agctatttctataacaatagataaaataaagtcaaactgtattcatataagctaaaagctgttttcataagctatcc 24887329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 347
Target Start/End: Complemental strand, 31337521 - 31337457
Alignment:
Q  283 ctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||| |||| ||||||||  ||||||||||| |||| |||| |||||||||||||||||| ||||    
T  31337521 ctatctctaaaacaaaagataaaataaagtcaaactgtttttatataagttataagttgtattca 31337457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 35364254 - 35364306
Alignment:
Q  295 caaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||| ||||||||||  || |||||| |||||||||||||||||||||||    
T  35364254 caaaaggtaaaataaagttaaattatttttatataagttataagttgttttca 35364306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 40122874 - 40122811
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgtttt 345  Q
    ||||||||| ||||||||||  ||||||||||| |||| |||||||| ||| |||||||||||||    
T  40122874 agctatttcaataacaaaagataaaataaagtcaaactgttttcata-aagctataagttgtttt 40122811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 347
Target Start/End: Complemental strand, 10101595 - 10101532
Alignment:
Q  284 tatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||||||||||||||  ||||||||||  || | |||||||||||| || ||||||||||||    
T  10101595 tatttctataacaaaagataaaataaagttaaattgttttcatataagataaaagttgttttca 10101532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 347
Target Start/End: Complemental strand, 10212520 - 10212457
Alignment:
Q  284 tatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||||||||||||||  ||||||||||  || | |||||||||||| || ||||||||||||    
T  10212520 tatttctataacaaaagataaaataaagttaaattgttttcatataagataaaagttgttttca 10212457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 248 - 335
Target Start/End: Complemental strand, 51278312 - 51278225
Alignment:
Q  248 tataagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttat 335  Q
    |||||||  ||||||||||| || | ||| || |||||||||||||||||||    |||||||||| |||| ||||||| ||||||||    
T  51278312 tataagcatttatcatataattgctaatgtataagctatttctataacaaaatattaaataaagtcaaactgttttcatttaagttat 51278225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 330
Target Start/End: Original strand, 2070978 - 2071052
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataa 330  Q
    ||||||| ||||||||| ||| || |||||||||| |||||||||  ||| || |||  ||||||||||||||||    
T  2070978 cttatcacataagtgttaatgtataagctatttctttaacaaaagataaagtagagtataactattttcatataa 2071052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 338
Target Start/End: Complemental strand, 20349623 - 20349541
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataag 338  Q
    |||||||||||||||||  || || |||||||||  ||||||| |  ||||| ||||| || |||||||||||||||| ||||    
T  20349623 cttatcatataagtgtttgtgtataagctatttcagtaacaaaggataaaatgaagtctaattattttcatataagttgtaag 20349541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 347
Target Start/End: Complemental strand, 32555091 - 32555037
Alignment:
Q  293 aacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||||  ||||||||||| || ||||||| |||||| |||||||||||||||    
T  32555091 aacaaaagataaaataaagtcaaattattttcctataagctataagttgttttca 32555037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 343
Target Start/End: Original strand, 32703062 - 32703148
Alignment:
Q  257 ttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgtt 343  Q
    ||||||||||| |||| ||| || |||||||||||| | |||||  |||||||| || || | |||||||||||| ||||| |||||    
T  32703062 ttatcatataaatgtttatgtataagctatttctattataaaagataaaataaactcaaattgttttcatataagctataaattgtt 32703148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 53457301 - 53457371
Alignment:
Q  257 ttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcata 327  Q
    ||||||| |||||||| | | || ||||| ||| ||||||||||  ||||||||||| |||||||||||||    
T  53457301 ttatcatttaagtgtttacgtataagctacttcgataacaaaagataaaataaagtcaaactattttcata 53457371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 54775079 - 54775140
Alignment:
Q  284 tatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttc 346  Q
    |||||||||||||||||  ||||||||||| ||| ||||| |||||| ||||||| |||||||    
T  54775079 tatttctataacaaaagataaaataaagtcaaaccatttttatataa-ttataagctgttttc 54775140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 327
Target Start/End: Complemental strand, 6241201 - 6241160
Alignment:
Q  286 tttctataacaaaaggaaaaataaagtcgaactattttcata 327  Q
    |||||||||||||||  ||||||||||| |||||||||||||    
T  6241201 tttctataacaaaagttaaaataaagtcaaactattttcata 6241160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 338
Target Start/End: Complemental strand, 24605154 - 24605081
Alignment:
Q  265 taagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataag 338  Q
    |||||||| ||| || || |||||||||||||||||   |||||||||| ||| |||| ||| |||||||||||    
T  24605154 taagtgtttatgtataagttatttctataacaaaagatgaaataaagtcaaaccatttgcatgtaagttataag 24605081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 333
Target Start/End: Complemental strand, 33307727 - 33307650
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagtt 333  Q
    ||||||||||||||| | ||| || |||||||||  ||||||||    |||||||||| || ||||||||||||||||    
T  33307727 cttatcatataagtgcttatgtataagctatttcagtaacaaaatatgaaataaagtcaaattattttcatataagtt 33307650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 356
Target Start/End: Complemental strand, 33405287 - 33405214
Alignment:
Q  283 ctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatc 356  Q
    ||||||||||| ||||||| ||||||||||  |  | |||||||||||| |||||| |||||||| || |||||    
T  33405287 ctatttctatagcaaaaggtaaaataaagttaatttgttttcatataagctataagctgttttcataagctatc 33405214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 356
Target Start/End: Complemental strand, 33965604 - 33965536
Alignment:
Q  290 tataacaaaaggaaaaataaagtcgaactattttcatat--aagttataagttgttttcaaaacctatc 356  Q
    |||||||||||| ||||||||||| |||| |||||||||  ||| |||||| |||||||| || |||||    
T  33965604 tataacaaaaggtaaaataaagtcaaactgttttcatataaaagctataagatgttttcataagctatc 33965536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 345
Target Start/End: Complemental strand, 43038825 - 43038765
Alignment:
Q  284 tatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgtttt 345  Q
    ||||||||| |||||| | ||||| ||||| |||||||| |||||||| |||||||||||||    
T  43038825 tatttctatgacaaaaagtaaaattaagtcaaactattt-catataagctataagttgtttt 43038765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Original strand, 47131960 - 47131997
Alignment:
Q  303 aaaataaagtcgaactattttcatataagttataagtt 340  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  47131960 aaaataaagtcgaacttttttaatataagttataagtt 47131997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 20192728 - 20192664
Alignment:
Q  281 agctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgtttt 345  Q
    |||||||| |||||||||||  ||||||||||| |||  |||||||||||  |||||| ||||||    
T  20192728 agctatttatataacaaaagataaaataaagtcaaacagttttcatataatctataagctgtttt 20192664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 312
Target Start/End: Original strand, 36445655 - 36445711
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagt 312  Q
    |||||||||| ||| || ||| || ||||||||||||||||||||  ||||||||||    
T  36445655 cttatcatatgagtttttatgtataagctatttctataacaaaagagaaaataaagt 36445711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 347
Target Start/End: Original strand, 39343022 - 39343054
Alignment:
Q  315 aactattttcatataagttataagttgttttca 347  Q
    |||||||||||| ||||||||||||||||||||    
T  39343022 aactattttcatgtaagttataagttgttttca 39343054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 249 - 356
Target Start/End: Original strand, 27492 - 27599
Alignment:
Q  249 ataagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaa 348  Q
    ||||||||||||||| |||||| | ||| || || ||||||||||||| |||  ||||||||||| || | |||||||||||  |||||||||||||||     
T  27492 ataagctcttatcatgtaagtgcttatgtataagttatttctataacagaagataaaataaagtcaaattgttttcatataaactataagttgttttcat 27591  T
Q  349 aacctatc 356  Q
    || |||||    
T  27592 aaactatc 27599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 1219 - 1146
Alignment:
Q  258 tatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataag 331  Q
    ||||||||||||| | ||| || ||||||||||||||||||||  ||||||||||| ||||||| |||||||||    
T  1219 tatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaactattctcatataag 1146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 258 - 331
Target Start/End: Original strand, 2756 - 2829
Alignment:
Q  258 tatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataag 331  Q
    ||||||||||||| | ||| || ||||||||||||||||||||  ||||||||||| ||||||| |||||||||    
T  2756 tatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaactattctcatataag 2829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 357
Target Start/End: Complemental strand, 18087 - 18015
Alignment:
Q  284 tatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctatcc 357  Q
    ||||||||||||||| | |||| | ||||| ||| |||||||||||| ||||||||||||||||||| ||||||    
T  18087 tatttctataacaaatgtaaaa-tgaagtcaaaccattttcatataaattataagttgttttcaaaaactatcc 18015  T

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Target: scaffold0508 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 358
Target Start/End: Complemental strand, 9922 - 9820
Alignment:
Q  256 cttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttcaaaacctat 355  Q
    ||||||||||| ||| | ||| || || ||||||||||||||||   ||||| ||||| ||   ||||||||||||||||| |||||||||| || ||||    
T  9922 cttatcatataggtgcttatgtataagttatttctataacaaaaaataaaattaagtcaaaaagttttcatataagttataggttgttttcataatctat 9823  T
Q  356 ccc 358  Q
    |||    
T  9822 ccc 9820  T

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Target: scaffold0199 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 347
Target Start/End: Original strand, 6741 - 6836
Alignment:
Q  250 taagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    |||||| ||| ||| |||||||| ||  || |||||||| |||||||||||| |||||||||| ||||| |||||  | |||||| ||||||||||||    
T  6741 taagcttttagcatgtaagtgtttatatataagctatttttataacaaaaggtaaaataaagttgaacttttttc--acaagttaaaagttgttttca 6836  T

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Target: scaffold0654 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 345
Target Start/End: Complemental strand, 6792 - 6695
Alignment:
Q  248 tataagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgtttt 345  Q
    ||||||| ||||||||||||||| | ||| || | |||||||||||||||||   ||| | ||||| || | |||||||| | |||| ||||||||||    
T  6792 tataagcacttatcatataagtgcttatgtataaactatttctataacaaaaaataaacttaagtcaaattgttttcatagaggttaaaagttgtttt 6695  T

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Target: scaffold0014 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 345
Target Start/End: Complemental strand, 116711 - 116614
Alignment:
Q  248 tataagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgtttt 345  Q
    ||||||| ||||||||||||||| | ||| || | |||||||||||||||||   ||| | ||||| || | |||||||| | |||| ||||||||||    
T  116711 tataagcacttatcatataagtgcttatgtataaactatttctataacaaaaaataaacttaagtcaaattgttttcatagaggttaaaagttgtttt 116614  T

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Target: scaffold0053 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 347
Target Start/End: Original strand, 20129 - 20193
Alignment:
Q  283 ctatttctataacaaaaggaaaaataaagtcgaactattttcatataagttataagttgttttca 347  Q
    ||||||||||||| ||||  ||||||||||| |||  || ||||||||| ||| |||||||||||    
T  20129 ctatttctataaccaaagataaaataaagtcaaacagttatcatataagctattagttgttttca 20193  T

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