View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0716_low_6 (Length: 247)
Name: NF0716_low_6
Description: NF0716
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0716_low_6 |
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Alignment Details
Target: chr6 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 102 - 221
Target Start/End: Original strand, 26216222 - 26216341
Alignment:
| Q |
102 |
agctagcgacaactagaccatatattccttaaggaccaacaaattagggaagaattttttaaagtcgtcacaaccaaagactaatcattctccaaccaaa |
201 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
26216222 |
agctagcgacaactagaccatgtattccttaaggaccaacaaattagggaagaattttttaaagtcgtcacaaccaaagattaatcattctccaaccaaa |
26216321 |
T |
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| Q |
202 |
ggtttggccaattattttga |
221 |
Q |
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|||||||||||||||||||| |
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| T |
26216322 |
ggtttggccaattattttga |
26216341 |
T |
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