View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0717_low_7 (Length: 342)
Name: NF0717_low_7
Description: NF0717
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0717_low_7 |
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Alignment Details
Target: chr1 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 54 - 337
Target Start/End: Original strand, 7432214 - 7432497
Alignment:
| Q |
54 |
tattagagatttagttgttctatagtcgcaaaagtgtgcatta---tttgtcaaactacatgaacaaagtatgtgtctatgtgtcttgcgatattctttt |
150 |
Q |
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| T |
7432214 |
tattagagatttagttgttttatagtcgcaaaagtgtacattactatttgtcaaactacatgaa---agtatgtgtctatgtgtcttgcgatattctttt |
7432310 |
T |
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| Q |
151 |
attttatttttctatcgttcgttggtgttctaatacaatcattcgactatttagacttcgtttgaccttaattggttggtggttcattttcaactaattg |
250 |
Q |
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| T |
7432311 |
attttatttttttatcgtttgttggtgttctaatacaatcattcgactatttagacttcatttgaccttaattgattggtggtttattttcaactaagtg |
7432410 |
T |
|
| Q |
251 |
taacatatgtaatcttttttcatagctaatatttttattagatttgcttcttgttccaaattattgatccttttttctcttcatctc |
337 |
Q |
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||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |
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| T |
7432411 |
taacatatgtaatcttttttcatagttaatctttttattagatttgcttcttgttccaaattattgaaccttttttctcttcttctc |
7432497 |
T |
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