View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0718_low_1 (Length: 745)

Name: NF0718_low_1
Description: NF0718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0718_low_1
NF0718_low_1
[»] chr2 (72 HSPs)
chr2 (12-504)||(35105790-35106281)
chr2 (25-505)||(35054891-35055363)
chr2 (25-350)||(35183753-35184078)
chr2 (26-314)||(35177756-35178044)
chr2 (71-314)||(35169510-35169753)
chr2 (594-656)||(35379015-35379077)
chr2 (592-658)||(44443328-44443394)
chr2 (594-663)||(14666557-14666626)
chr2 (594-663)||(34652028-34652097)
chr2 (598-663)||(43199776-43199841)
chr2 (592-659)||(680510-680577)
chr2 (588-659)||(12313169-12313240)
chr2 (594-661)||(43910993-43911060)
chr2 (594-637)||(43985021-43985064)
chr2 (594-663)||(9174824-9174894)
chr2 (587-637)||(9595260-9595310)
chr2 (594-663)||(1056121-1056190)
chr2 (575-640)||(3227698-3227763)
chr2 (594-659)||(29316771-29316836)
chr2 (594-658)||(16867748-16867812)
chr2 (588-663)||(15120186-15120261)
chr2 (616-663)||(41809237-41809284)
chr2 (592-659)||(41817175-41817242)
chr2 (594-663)||(26143631-26143701)
chr2 (594-664)||(33942159-33942229)
chr2 (594-652)||(38078413-38078471)
chr2 (617-663)||(44606102-44606148)
chr2 (594-663)||(1939324-1939393)
chr2 (585-638)||(3067396-3067449)
chr2 (594-659)||(7871652-7871717)
chr2 (594-659)||(8017443-8017508)
chr2 (592-657)||(9530726-9530791)
chr2 (594-663)||(32821818-32821887)
chr2 (594-663)||(33941918-33941987)
chr2 (594-663)||(43065442-43065511)
chr2 (594-663)||(43141880-43141949)
chr2 (595-643)||(656789-656837)
chr2 (601-661)||(1893275-1893335)
chr2 (616-672)||(12147488-12147544)
chr2 (592-648)||(12464480-12464536)
chr2 (594-662)||(35485926-35485994)
chr2 (594-637)||(1810673-1810716)
chr2 (603-650)||(7928304-7928351)
chr2 (616-655)||(8820292-8820331)
chr2 (594-657)||(10563556-10563619)
chr2 (600-643)||(12464679-12464722)
chr2 (624-663)||(30538165-30538204)
chr2 (587-630)||(36863650-36863693)
chr2 (592-659)||(42420004-42420071)
chr2 (594-659)||(1625909-1625975)
chr2 (577-663)||(7282988-7283074)
chr2 (616-658)||(11063519-11063561)
chr2 (594-640)||(15977994-15978040)
chr2 (594-659)||(26626882-26626948)
chr2 (594-656)||(35378531-35378593)
chr2 (584-658)||(35993377-35993451)
chr2 (594-659)||(40682390-40682455)
chr2 (577-659)||(41144202-41144284)
chr2 (594-640)||(44590043-44590089)
chr2 (592-637)||(1056371-1056416)
chr2 (594-663)||(8187445-8187514)
chr2 (595-663)||(11488287-11488353)
chr2 (592-664)||(16398121-16398194)
chr2 (594-655)||(19333325-19333386)
chr2 (587-663)||(30552635-30552712)
chr2 (618-663)||(32614940-32614985)
chr2 (594-659)||(33256749-33256814)
chr2 (594-663)||(36415666-36415734)
chr2 (594-659)||(40158727-40158792)
chr2 (594-663)||(42817368-42817437)
chr2 (594-635)||(44644287-44644328)
chr2 (618-663)||(45314901-45314946)
[»] chr7 (45 HSPs)
chr7 (77-326)||(25484265-25484514)
chr7 (574-663)||(7244669-7244758)
chr7 (576-659)||(22551401-22551484)
chr7 (594-663)||(12110369-12110438)
chr7 (585-658)||(48917341-48917416)
chr7 (592-639)||(12792579-12792626)
chr7 (594-671)||(529384-529461)
chr7 (157-314)||(25436405-25436562)
chr7 (70-310)||(25636522-25636762)
chr7 (70-317)||(25442323-25442570)
chr7 (575-661)||(34035907-34035994)
chr7 (594-663)||(46825107-46825178)
chr7 (594-643)||(25596042-25596091)
chr7 (587-659)||(6552288-6552360)
chr7 (574-659)||(43250695-43250782)
chr7 (594-658)||(44151477-44151541)
chr7 (599-661)||(21247939-21248002)
chr7 (616-663)||(46082067-46082114)
chr7 (616-663)||(47134749-47134796)
chr7 (594-660)||(4966165-4966231)
chr7 (617-663)||(11048059-11048105)
chr7 (605-663)||(25670578-25670636)
chr7 (594-663)||(9423586-9423655)
chr7 (592-637)||(12792642-12792687)
chr7 (594-655)||(24363601-24363662)
chr7 (598-658)||(29286804-29286864)
chr7 (591-663)||(30316968-30317040)
chr7 (592-639)||(12792514-12792561)
chr7 (624-663)||(20888386-20888425)
chr7 (600-659)||(35267377-35267436)
chr7 (610-661)||(44808183-44808234)
chr7 (574-637)||(5017958-5018023)
chr7 (155-317)||(25478885-25479047)
chr7 (621-663)||(36537944-36537986)
chr7 (574-653)||(42656482-42656563)
chr7 (617-659)||(43219640-43219682)
chr7 (594-659)||(9038121-9038185)
chr7 (618-663)||(15740403-15740448)
chr7 (594-639)||(18962588-18962633)
chr7 (594-639)||(18965726-18965771)
chr7 (594-643)||(27378840-27378889)
chr7 (594-663)||(33645953-33646021)
chr7 (594-663)||(45859519-45859587)
chr7 (594-639)||(46104583-46104628)
chr7 (594-655)||(47559601-47559662)
[»] chr1 (85 HSPs)
chr1 (595-663)||(37593676-37593744)
chr1 (594-659)||(34290245-34290310)
chr1 (598-663)||(46252674-46252739)
chr1 (594-659)||(10199404-10199469)
chr1 (594-659)||(7136994-7137059)
chr1 (594-658)||(25479590-25479654)
chr1 (599-659)||(28689448-28689508)
chr1 (592-659)||(6292500-6292567)
chr1 (596-663)||(31517732-31517799)
chr1 (594-656)||(37842354-37842416)
chr1 (604-661)||(8016276-8016333)
chr1 (594-659)||(10854742-10854807)
chr1 (592-657)||(14629964-14630029)
chr1 (594-643)||(26779937-26779986)
chr1 (594-659)||(27140487-27140552)
chr1 (594-639)||(43332493-43332538)
chr1 (594-658)||(4576814-4576878)
chr1 (599-659)||(5886990-5887050)
chr1 (594-661)||(19389910-19389978)
chr1 (585-641)||(26461955-26462011)
chr1 (599-661)||(15784343-15784406)
chr1 (600-659)||(38170686-38170745)
chr1 (594-661)||(38867825-38867892)
chr1 (594-660)||(7218069-7218135)
chr1 (593-651)||(15361048-15361106)
chr1 (574-659)||(30815649-30815738)
chr1 (610-663)||(42397749-42397803)
chr1 (616-658)||(47877140-47877182)
chr1 (594-639)||(5047155-5047200)
chr1 (594-655)||(7262518-7262579)
chr1 (598-639)||(7472324-7472365)
chr1 (594-643)||(12564511-12564560)
chr1 (574-663)||(23373305-23373393)
chr1 (594-659)||(31118052-31118117)
chr1 (578-659)||(48748601-48748682)
chr1 (594-659)||(52190138-52190203)
chr1 (594-661)||(1509959-1510027)
chr1 (591-663)||(4699607-4699679)
chr1 (595-643)||(11893605-11893653)
chr1 (575-663)||(29834897-29834985)
chr1 (594-658)||(30257692-30257756)
chr1 (574-659)||(35707194-35707281)
chr1 (602-650)||(38503470-38503518)
chr1 (624-663)||(3223706-3223745)
chr1 (617-660)||(3224455-3224498)
chr1 (592-659)||(4445715-4445782)
chr1 (587-658)||(4920767-4920838)
chr1 (586-653)||(6279400-6279467)
chr1 (592-663)||(10280656-10280727)
chr1 (617-664)||(10809377-10809424)
chr1 (595-642)||(35590905-35590952)
chr1 (594-664)||(1565526-1565596)
chr1 (601-643)||(11129324-11129366)
chr1 (594-652)||(12564877-12564935)
chr1 (621-663)||(29635383-29635425)
chr1 (593-659)||(43338124-43338190)
chr1 (599-661)||(43722322-43722384)
chr1 (594-648)||(45975699-45975753)
chr1 (599-637)||(51190862-51190900)
chr1 (594-663)||(51695486-51695556)
chr1 (594-663)||(3924633-3924702)
chr1 (594-659)||(4202147-4202212)
chr1 (594-643)||(4548730-4548779)
chr1 (625-658)||(4549888-4549921)
chr1 (598-659)||(4622106-4622167)
chr1 (594-655)||(4700066-4700127)
chr1 (594-663)||(4868409-4868478)
chr1 (616-661)||(5276324-5276369)
chr1 (594-659)||(12477283-12477348)
chr1 (594-659)||(12593449-12593514)
chr1 (618-663)||(15579515-15579560)
chr1 (597-658)||(16981933-16981994)
chr1 (594-659)||(24460403-24460468)
chr1 (599-663)||(26185524-26185589)
chr1 (594-659)||(27963366-27963431)
chr1 (594-651)||(28077073-28077130)
chr1 (594-659)||(28909999-28910064)
chr1 (601-658)||(28935873-28935930)
chr1 (594-651)||(32182280-32182337)
chr1 (624-661)||(34278687-34278724)
chr1 (594-663)||(35080061-35080130)
chr1 (598-659)||(35925703-35925764)
chr1 (594-659)||(41195189-41195254)
chr1 (594-663)||(45205077-45205146)
chr1 (624-661)||(47917275-47917312)
[»] chr5 (48 HSPs)
chr5 (209-327)||(500322-500440)
chr5 (594-659)||(17258879-17258944)
chr5 (594-658)||(11707064-11707128)
chr5 (574-661)||(12242704-12242791)
chr5 (588-663)||(37611207-37611282)
chr5 (588-663)||(37787937-37788012)
chr5 (586-663)||(10125710-10125787)
chr5 (594-659)||(13604845-13604910)
chr5 (594-659)||(36639531-36639596)
chr5 (596-663)||(12459993-12460060)
chr5 (594-663)||(7674657-7674726)
chr5 (594-663)||(10272423-10272492)
chr5 (594-663)||(17368685-17368754)
chr5 (594-650)||(4014429-4014485)
chr5 (599-659)||(12521542-12521602)
chr5 (587-659)||(32408588-32408660)
chr5 (594-658)||(33533536-33533600)
chr5 (616-663)||(12467164-12467211)
chr5 (594-661)||(25461310-25461377)
chr5 (574-661)||(985600-985689)
chr5 (594-659)||(9202743-9202809)
chr5 (618-659)||(499727-499768)
chr5 (594-663)||(2092537-2092606)
chr5 (594-659)||(2568667-2568732)
chr5 (594-643)||(7319020-7319069)
chr5 (606-663)||(8089957-8090014)
chr5 (594-659)||(18543193-18543257)
chr5 (594-643)||(18906351-18906400)
chr5 (594-659)||(21768193-21768258)
chr5 (594-659)||(26209409-26209474)
chr5 (594-659)||(41957447-41957512)
chr5 (594-658)||(5284445-5284509)
chr5 (594-650)||(7984978-7985034)
chr5 (595-643)||(38104869-38104917)
chr5 (596-644)||(38829647-38829695)
chr5 (594-648)||(3237102-3237156)
chr5 (594-648)||(7907890-7907944)
chr5 (597-659)||(32545046-32545108)
chr5 (594-659)||(39105473-39105539)
chr5 (618-659)||(1899187-1899228)
chr5 (618-663)||(11700370-11700415)
chr5 (594-643)||(12425580-12425629)
chr5 (594-663)||(32172662-32172731)
chr5 (600-661)||(32194073-32194134)
chr5 (594-663)||(32897466-32897535)
chr5 (616-657)||(35963272-35963313)
chr5 (574-659)||(36774703-36774788)
chr5 (594-643)||(39594816-39594865)
[»] chr8 (47 HSPs)
chr8 (574-659)||(20672739-20672824)
chr8 (574-662)||(33553229-33553317)
chr8 (592-653)||(42215084-42215145)
chr8 (592-663)||(30191133-30191204)
chr8 (587-636)||(11494148-11494197)
chr8 (616-663)||(13000416-13000463)
chr8 (595-662)||(21653091-21653158)
chr8 (617-663)||(2594989-2595035)
chr8 (594-640)||(4762518-4762564)
chr8 (592-653)||(11493972-11494033)
chr8 (594-659)||(11569453-11569518)
chr8 (593-661)||(25869260-25869328)
chr8 (599-663)||(39866726-39866790)
chr8 (574-661)||(14949855-14949942)
chr8 (594-637)||(27028840-27028883)
chr8 (617-656)||(30389131-30389170)
chr8 (592-655)||(33714236-33714299)
chr8 (594-661)||(38421273-38421340)
chr8 (574-629)||(40280253-40280308)
chr8 (616-659)||(41606899-41606942)
chr8 (592-659)||(42215302-42215369)
chr8 (612-658)||(3600735-3600781)
chr8 (612-658)||(14339602-14339648)
chr8 (594-663)||(779053-779122)
chr8 (618-663)||(4281579-4281624)
chr8 (594-663)||(30918122-30918190)
chr8 (619-663)||(32840977-32841022)
chr8 (594-663)||(41620283-41620352)
chr8 (594-643)||(44236835-44236884)
chr8 (594-658)||(2235653-2235717)
chr8 (594-650)||(9956819-9956875)
chr8 (595-663)||(12224891-12224959)
chr8 (594-658)||(27754413-27754477)
chr8 (592-659)||(9540992-9541059)
chr8 (592-655)||(10075551-10075614)
chr8 (588-659)||(12851179-12851250)
chr8 (594-657)||(28769337-28769400)
chr8 (592-658)||(28784793-28784858)
chr8 (594-656)||(29059795-29059857)
chr8 (594-658)||(1930044-1930109)
chr8 (616-661)||(3161617-3161662)
chr8 (594-659)||(5069706-5069771)
chr8 (594-663)||(7918438-7918507)
chr8 (594-639)||(7918789-7918834)
chr8 (594-659)||(37353245-37353310)
chr8 (594-663)||(39551201-39551270)
chr8 (594-663)||(43504760-43504829)
[»] chr6 (45 HSPs)
chr6 (594-659)||(33887839-33887904)
chr6 (591-663)||(4420649-4420721)
chr6 (594-659)||(6647396-6647461)
chr6 (610-661)||(6536972-6537023)
chr6 (611-661)||(9027604-9027654)
chr6 (601-659)||(13908479-13908537)
chr6 (574-656)||(31583668-31583750)
chr6 (594-663)||(2112209-2112278)
chr6 (574-635)||(2205610-2205671)
chr6 (594-663)||(3528812-3528881)
chr6 (594-663)||(30863255-30863324)
chr6 (587-638)||(26694880-26694931)
chr6 (594-639)||(835265-835310)
chr6 (594-659)||(5564124-5564189)
chr6 (594-663)||(7931718-7931787)
chr6 (594-663)||(10616533-10616602)
chr6 (594-663)||(20368172-20368241)
chr6 (594-639)||(27894055-27894100)
chr6 (594-659)||(31624099-31624164)
chr6 (594-659)||(32386559-32386624)
chr6 (594-663)||(34403864-34403933)
chr6 (598-663)||(34939526-34939591)
chr6 (591-663)||(2455816-2455888)
chr6 (593-653)||(17241254-17241314)
chr6 (594-658)||(19275633-19275697)
chr6 (594-642)||(20370892-20370940)
chr6 (595-643)||(20512656-20512704)
chr6 (591-663)||(29837077-29837148)
chr6 (619-663)||(33832265-33832309)
chr6 (619-658)||(821833-821872)
chr6 (594-661)||(8364970-8365037)
chr6 (616-663)||(31420976-31421023)
chr6 (596-659)||(34939755-34939818)
chr6 (596-662)||(281841-281907)
chr6 (617-659)||(696634-696676)
chr6 (577-662)||(10031723-10031809)
chr6 (616-658)||(29296292-29296334)
chr6 (594-632)||(31812036-31812074)
chr6 (624-661)||(733171-733208)
chr6 (594-639)||(1497990-1498035)
chr6 (618-663)||(1575928-1575973)
chr6 (594-639)||(13907856-13907901)
chr6 (616-657)||(27909636-27909677)
chr6 (592-637)||(32387073-32387118)
chr6 (594-659)||(33089515-33089580)
[»] chr3 (63 HSPs)
chr3 (604-659)||(36139897-36139952)
chr3 (604-659)||(36101587-36101642)
chr3 (594-661)||(36887513-36887580)
chr3 (594-659)||(21367676-21367742)
chr3 (574-639)||(16790394-16790459)
chr3 (594-663)||(37273143-37273212)
chr3 (599-659)||(23808060-23808120)
chr3 (591-659)||(54837030-54837098)
chr3 (594-657)||(20669181-20669244)
chr3 (598-657)||(33883748-33883807)
chr3 (600-663)||(42745053-42745116)
chr3 (592-659)||(52440658-52440725)
chr3 (594-664)||(39602201-39602271)
chr3 (594-656)||(40665438-40665500)
chr3 (594-659)||(24785214-24785279)
chr3 (594-663)||(30573906-30573975)
chr3 (592-641)||(34924552-34924601)
chr3 (594-663)||(52619012-52619081)
chr3 (599-663)||(36200110-36200174)
chr3 (591-659)||(45541577-45541645)
chr3 (616-663)||(3044251-3044298)
chr3 (587-658)||(45432936-45433007)
chr3 (594-653)||(53736122-53736181)
chr3 (591-637)||(2825153-2825199)
chr3 (594-640)||(20502083-20502129)
chr3 (593-658)||(36878753-36878819)
chr3 (594-643)||(2719477-2719526)
chr3 (594-659)||(8933796-8933861)
chr3 (616-661)||(25925773-25925818)
chr3 (594-658)||(35394494-35394559)
chr3 (574-659)||(37825111-37825196)
chr3 (603-660)||(47249481-47249538)
chr3 (602-663)||(47513670-47513731)
chr3 (594-663)||(50600170-50600239)
chr3 (575-643)||(12985357-12985425)
chr3 (595-643)||(13371127-13371175)
chr3 (594-650)||(26320107-26320163)
chr3 (583-643)||(26478943-26479003)
chr3 (599-663)||(29771852-29771916)
chr3 (594-657)||(33965486-33965550)
chr3 (623-663)||(41724250-41724290)
chr3 (594-661)||(1816592-1816659)
chr3 (575-634)||(13413920-13413979)
chr3 (592-651)||(25453863-25453922)
chr3 (592-643)||(34414796-34414847)
chr3 (616-659)||(36445856-36445899)
chr3 (616-663)||(43115087-43115134)
chr3 (594-657)||(51130759-51130822)
chr3 (617-659)||(5391911-5391953)
chr3 (617-659)||(5396229-5396271)
chr3 (617-659)||(39723236-39723278)
chr3 (594-640)||(41633369-41633415)
chr3 (522-568)||(49465780-49465826)
chr3 (594-659)||(1217796-1217861)
chr3 (591-632)||(14145918-14145959)
chr3 (594-643)||(20170720-20170769)
chr3 (594-663)||(21574499-21574568)
chr3 (594-643)||(34382951-34383000)
chr3 (595-659)||(34610801-34610866)
chr3 (616-657)||(34954113-34954154)
chr3 (595-656)||(41671320-41671381)
chr3 (574-643)||(46407906-46407975)
chr3 (594-659)||(54180776-54180841)
[»] chr4 (47 HSPs)
chr4 (587-657)||(28300297-28300367)
chr4 (594-659)||(23819098-23819163)
chr4 (594-638)||(47800632-47800676)
chr4 (594-663)||(2996582-2996651)
chr4 (594-663)||(4471177-4471246)
chr4 (594-651)||(17884077-17884134)
chr4 (574-659)||(21043231-21043316)
chr4 (594-659)||(29263379-29263444)
chr4 (594-651)||(47145971-47146028)
chr4 (594-659)||(52746836-52746901)
chr4 (594-643)||(53673670-53673719)
chr4 (575-638)||(4500836-4500899)
chr4 (594-661)||(46019623-46019690)
chr4 (592-639)||(51630118-51630165)
chr4 (594-656)||(7694009-7694071)
chr4 (614-656)||(24747348-24747390)
chr4 (594-655)||(4798566-4798627)
chr4 (585-638)||(18011871-18011924)
chr4 (594-643)||(18628555-18628604)
chr4 (574-659)||(35743271-35743356)
chr4 (594-663)||(40532586-40532655)
chr4 (574-643)||(5131262-5131335)
chr4 (595-659)||(44249295-44249359)
chr4 (616-659)||(1137743-1137786)
chr4 (619-658)||(8469374-8469413)
chr4 (576-643)||(25548140-25548207)
chr4 (594-659)||(42641635-42641702)
chr4 (616-659)||(43824314-43824357)
chr4 (624-663)||(46401303-46401342)
chr4 (594-653)||(55084483-55084542)
chr4 (594-660)||(825485-825551)
chr4 (594-632)||(2111073-2111111)
chr4 (617-663)||(4691880-4691926)
chr4 (594-632)||(29778804-29778842)
chr4 (594-636)||(30631248-30631290)
chr4 (587-663)||(53155265-53155338)
chr4 (594-639)||(3155612-3155657)
chr4 (598-639)||(14011247-14011288)
chr4 (600-637)||(30377433-30377470)
chr4 (594-639)||(35290203-35290248)
chr4 (616-657)||(42461282-42461323)
chr4 (587-656)||(43932437-43932506)
chr4 (624-661)||(46201387-46201424)
chr4 (594-663)||(46415784-46415853)
chr4 (596-641)||(47118979-47119024)
chr4 (594-643)||(49219148-49219197)
chr4 (594-659)||(52735131-52735195)
[»] scaffold0147 (2 HSPs)
scaffold0147 (599-663)||(4927-4991)
scaffold0147 (601-663)||(12696-12758)
[»] scaffold0089 (1 HSPs)
scaffold0089 (595-643)||(33639-33687)
[»] scaffold0311 (1 HSPs)
scaffold0311 (608-663)||(10609-10664)


Alignment Details
Target: chr2 (Bit Score: 258; Significance: 1e-143; HSPs: 72)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 12 - 504
Target Start/End: Original strand, 35105790 - 35106281
Alignment:
Q  12 atgagatgga-catcatcataaaaaccagggaaaacagtttgtttcaatttttcatggcattcagcaatagtagccatctcttccaaacaccacgttgaa 110  Q
    |||||||||| || ||||||||||| ||||||||||||||||||||||| ||| | |||||||||||| |||||||||||||||||||||||| |||||     
T  35105790 atgagatggatcaacatcataaaaaacagggaaaacagtttgtttcaatcttttacggcattcagcaacagtagccatctcttccaaacaccatgttgac 35105889  T
Q  111 tcggcatatctttgagagaagacaacaatagaaattcttgaactttgaattgcttgtagaagttgcggtgaaagggattctcctttctcaagcctttgat 210  Q
    ||||||||||||| ||||||||||||||||||||  |  ||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  35105890 tcggcatatctttcagagaagacaacaatagaaacccgagaattttgaattgcttgaagaagttgcggcgaaagggattctcctttctcaagcctttgat 35105989  T
Q  211 catccttgaaggcaaaaataccctttctttttagatgagcataaagatgatcaacaaaagtgttgcgaacgtcaggacctctaaaacttataaacacatc 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||   ||| |||||||| ||||| |||||||| ||    
T  35105990 catccttgaaggcaaaaataccctttctttttagatgagcataaagatgatcgacaaaagtgttgcgcgtgtctggacctctgaaactgataaacacgtc 35106089  T
Q  311 gtatctacagctttggaagctattggagtccatggaagaattggaagcttcggctccttgcctcaaattggaaaacggcaaacgactaaacagtgtgcaa 410  Q
    ||||||| |||||||   | ||||  | ||||||||||||||||||||||| |||||||| |||||||| ||||| ||||||| |   |||| || |||     
T  35106090 gtatctatagctttgatcgttattaaaatccatggaagaattggaagcttcagctccttgtctcaaatttgaaaatggcaaacaatccaaca-tg-gcac 35106187  T
Q  411 gaaacggttgcaggagaaaggaccttaatgagagcaacttatctatgatgcaaattgaaaatgcaacaacaataataagaataattataaacaa 504  Q
    ||| |||||| |||||| |||| ||  ||||||| ||| |||||||||| |||||  ||||||||||||||| |||||||||||||||||||||    
T  35106188 gaaccggttgtaggagataggaactccatgagagtaacgtatctatgatacaaatgaaaaatgcaacaacaacaataagaataattataaacaa 35106281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 25 - 505
Target Start/End: Original strand, 35054891 - 35055363
Alignment:
Q  25 catcataaaaaccagggaaaacagtttgtttcaatttttcatggcattcagcaatagtagccatctcttccaaacaccacgttgaatcggcatatctttg 124  Q
    |||||||||||  ||||||||| |||||||| || |  |||   || |||||||| | ||||||||||||||||||||| ||||| ||||||||| |||     
T  35054891 catcataaaaaatagggaaaactgtttgtttgaaatactcacaacaatcagcaattgcagccatctcttccaaacaccaagttgattcggcatatgtttt 35054990  T
Q  125 agagaagacaacaatagaaattcttgaactttgaattgcttgtagaagttgcggtgaaagggattctcctttctcaagcctttgatcatccttgaaggca 224  Q
    |||||||||||||||| ||||||  ||| || |||||||||||||||| ||||||||||   |||||||||||||||| ||||  |||||||||||||||    
T  35054991 agagaagacaacaataaaaattcgcgaatttcgaattgcttgtagaagctgcggtgaaataaattctcctttctcaagacttttgtcatccttgaaggca 35055090  T
Q  225 aaaataccctttctttttagatgagcataaagatgatcaacaaaagtgttgcgaacgtcaggacctctaaaacttataaacacatcgtatctacagcttt 324  Q
    |||||||| |||||| ||||||||||||||||||||||||||||| | ||||||  |||||||||||||||||| || |||||  ||||| || |||| |    
T  35055091 aaaataccttttcttgttagatgagcataaagatgatcaacaaaactattgcgagtgtcaggacctctaaaactgatgaacaccccgtatttatagctct 35055190  T
Q  325 ggaagctattggagtccatggaagaattggaagcttcggctccttgcctcaaattggaaaacggcaaacgactaaacagtgtgcaagaaacggttgcagg 424  Q
    |   |  |||  | ||||||||| | ||||||       ||||| || ||||||||||| | |  |||||||  ||||  | ||| ||||| ||||||||    
T  35055191 gattgtgattataatccatggaaaatttggaa------tctcctagcttcaaattggaagatgataaacgacccaaca--gcgcacgaaaccgttgcagg 35055282  T
Q  425 agaaaggaccttaatgagagcaacttatctatgatgcaaattgaaaatgcaacaacaataataagaataattataaacaaa 505  Q
    ||||||||| | |||||||| ||| |||||||||| ||| |||||||| ||||||||| ||||||||||||||| ||||||    
T  35055283 agaaaggacttcaatgagagtaacatatctatgatacaacttgaaaattcaacaacaaaaataagaataattattaacaaa 35055363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 25 - 350
Target Start/End: Original strand, 35183753 - 35184078
Alignment:
Q  25 catcataaaaaccagggaaaacagtttgtttcaatttttcatggcattcagcaatagtagccatctcttccaaacaccacgttgaatcggcatatctttg 124  Q
    |||||||||||  |||||||||||| |||||||||| |  |||  ||||||||||||| |||||||||||||||||  | ||||| || |||||  |||     
T  35183753 catcataaaaaatagggaaaacagtctgtttcaattctgtatgatattcagcaatagtggccatctcttccaaacataatgttgactccgcataattttt 35183852  T
Q  125 agagaagacaacaatagaaattcttgaactttgaattgcttgtagaagttgcggtgaaagggattctcctttctcaagcctttgatcatccttgaaggca 224  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||  ||||||||||| ||     
T  35183853 agagaagacaacaatagaaatccgagaactttgaattgcttgtagaagttgcggcgaaagggattctcctttttcaagtcttttgtcatccttgaaagcg 35183952  T
Q  225 aaaataccctttctttttagatgagcataaagatgatcaacaaaagtgttgcgaacgtcaggacctctaaaacttataaacacatcgtatctacagcttt 324  Q
    |||||||||||  || |||||||||||| ||||||||||||||||||| ||||   ||||| ||| |  ||||| ||||||||||| |||||| ||||||    
T  35183953 aaaatacccttagttgttagatgagcatgaagatgatcaacaaaagtgctgcgggtgtcagcaccacggaaactgataaacacatcatatctatagcttt 35184052  T
Q  325 ggaagctattggagtccatggaagaa 350  Q
    ||| ||||||||| ||  ||||||||    
T  35184053 ggatgctattggaatcactggaagaa 35184078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 26 - 314
Target Start/End: Original strand, 35177756 - 35178044
Alignment:
Q  26 atcataaaaaccagggaaaacagtttgtttcaatttttcatggcattcagcaatagtagccatctcttccaaacaccacgttgaatcggcatatctttga 125  Q
    |||||||||| |||||||||||||||||   || ||   | | |||||| ||||||||||||| |||||||||||||| ||||| || ||||||||||      
T  35177756 atcataaaaaacagggaaaacagtttgtaagaaattgctacgacattcaacaatagtagccatttcttccaaacaccatgttgactcagcatatctttct 35177855  T
Q  126 gagaagacaacaatagaaattcttgaactttgaattgcttgtagaagttgcggtgaaagggattctcctttctcaagcctttgatcatccttgaaggcaa 225  Q
    ||||||||||| ||||| || | |||| ||  |||||||||| |||||||| | |||||| ||||||||||||| ||||||| |||||||||||| ||||    
T  35177856 gagaagacaacgatagatatccgtgaatttgcaattgcttgtcgaagttgcagcgaaaggcattctcctttctcgagccttttatcatccttgaacgcaa 35177955  T
Q  226 aaataccctttctttttagatgagcataaagatgatcaacaaaagtgttgcgaacgtcaggacctctaaaacttataaacacatcgtat 314  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||   ||| |||||||| ||||| |||||||| ||||||    
T  35177956 aaataccttttcttgttagatgagcataaagatgatcaacaaaagtgttgcgggtgtctggacctctgaaactgataaacacgtcgtat 35178044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 71 - 314
Target Start/End: Original strand, 35169510 - 35169753
Alignment:
Q  71 ttcagcaatagtagccatctcttccaaacaccacgttgaatcggcatatctttgagagaagacaacaatagaaattcttgaactttgaattgcttgtaga 170  Q
    |||| |||| |||||||| |||||||||||||| ||||| || ||||||||||  |||||||||||||||||||| | |||| ||  |||||||||| ||    
T  35169510 ttcaacaatggtagccatttcttccaaacaccatgttgactcagcatatctttctgagaagacaacaatagaaatccgtgaatttgtaattgcttgtcga 35169609  T
Q  171 agttgcggtgaaagggattctcctttctcaagcctttgatcatccttgaaggcaaaaataccctttctttttagatgagcataaagatgatcaacaaaag 270  Q
     |||||| ||||| | ||||||||||||| ||||||| ||||||||||||||| |||| |||||||||  ||||||||||||||||||||||||||||||    
T  35169610 tgttgcgttgaaaagcattctcctttctctagccttttatcatccttgaaggcgaaaacaccctttctagttagatgagcataaagatgatcaacaaaag 35169709  T
Q  271 tgttgcgaacgtcaggacctctaaaacttataaacacatcgtat 314  Q
    |||| ||   |||||  ||||| ||||| |||||||||||||||    
T  35169710 tgttacgggtgtcagcgcctctgaaactgataaacacatcgtat 35169753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 594 - 656
Target Start/End: Complemental strand, 35379077 - 35379015
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcat 656  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||| |||||| |||||    
T  35379077 ttttcataagctatcttggagagcttatgaaaataagctgaaaacaacttatgaacaagtcat 35379015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 592 - 658
Target Start/End: Original strand, 44443328 - 44443394
Alignment:
Q  592 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 658  Q
    |||||||||||||||||||  || || ||||||||||||||||||||||||| ||||||| ||||||    
T  44443328 tattttcataagctatctttgagagcatatgaaaataagctgaaaacaacttatgaacatttcataa 44443394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 594 - 663
Target Start/End: Original strand, 14666557 - 14666626
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||| |||||||||||   |||||||||||||||| |||||||||| | |||||||||||||||||||    
T  14666557 ttttcacaagctatcttggtatgcttatgaaaataaggtgaaaacaacctatgaacatgtcataagttgt 14666626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 594 - 663
Target Start/End: Complemental strand, 34652097 - 34652028
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||||||||| || ||||||| ||||||| |||||||| ||| || ||||||||||||||||    
T  34652097 ttttcataagctatcttggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgt 34652028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 598 - 663
Target Start/End: Complemental strand, 43199841 - 43199776
Alignment:
Q  598 cataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||||| || |||||||||| ||||||||||||||||| | ||||||||| |||||||    
T  43199841 cataagctatcttggagggcttatgaaattaagctgaaaacaacttataaacatgtcacaagttgt 43199776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 592 - 659
Target Start/End: Original strand, 680510 - 680577
Alignment:
Q  592 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||||||||||||||||||||||  ||| |||||||||||||||||||  || | |||||||||||||    
T  680510 tattttcataagctatcttgaagaacttgtgaaaataagctgaaaacagtttataaacatgtcataag 680577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 588 - 659
Target Start/End: Complemental strand, 12313240 - 12313169
Alignment:
Q  588 aaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||| ||| |||||||||||||| || ||||||||||||||| ||||| |||||| |||||||| ||||||    
T  12313240 aaattgtttacataagctatcttggagagcttatgaaaataaggtgaaatcaacttatgaacatggcataag 12313169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 594 - 661
Target Start/End: Complemental strand, 43911060 - 43910993
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 661  Q
    |||||| ||||||||||| |  |||| ||| ||||||||||||||||||| |||||||||||||||||    
T  43911060 ttttcaaaagctatcttggaaagcttgtgataataagctgaaaacaacttatgaacatgtcataagtt 43910993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 594 - 637
Target Start/End: Complemental strand, 43985064 - 43985021
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaa 637  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  43985064 ttttcataagctatcttgaagagcttatgaaaataagctgaaaa 43985021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 663
Target Start/End: Original strand, 9174824 - 9174894
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataagttgt 663  Q
    |||||||||||||||||  || |||||||||||||||||||||| | ||| ||||| ||||||||||||||    
T  9174824 ttttcataagctatcttacagagcttatgaaaataagctgaaaatagcttatgaacaatgtcataagttgt 9174894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 587 - 637
Target Start/End: Original strand, 9595260 - 9595310
Alignment:
Q  587 taaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaa 637  Q
    |||||||||||||||| ||||||| || |||||||||||||||||||||||    
T  9595260 taaattattttcataaactatcttaaaatgcttatgaaaataagctgaaaa 9595310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 663
Target Start/End: Complemental strand, 1056190 - 1056121
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||| ||||| || || || ||||||||||| |||||||||||||||  |||||||||||||||||||    
T  1056190 ttttcacaagctctcatgtagagcttatgaaaacaagctgaaaacaactaatgaacatgtcataagttgt 1056121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 575 - 640
Target Start/End: Complemental strand, 3227763 - 3227698
Alignment:
Q  575 ataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaa 640  Q
    |||||| ||||||||||| |||||||||||||| ||| || | || ||||||||||||||||||||    
T  3227763 ataaaacaaagttaaattgttttcataagctattttggagagattttgaaaataagctgaaaacaa 3227698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 659
Target Start/End: Complemental strand, 29316836 - 29316771
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||| |||||||||| ||  |||||| |||||||||||||| ||||| |||||||||||||||    
T  29316836 ttttcatcagctatcttggagaacttatggaaataagctgaaaagaacttatgaacatgtcataag 29316771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 594 - 658
Target Start/End: Original strand, 16867748 - 16867812
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 658  Q
    |||||| ||||||||||| || ||||||| ||||||| |||||||||||| |||| |||||||||    
T  16867748 ttttcacaagctatcttggagagcttatggaaataagttgaaaacaacttatgaatatgtcataa 16867812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 588 - 663
Target Start/End: Original strand, 15120186 - 15120261
Alignment:
Q  588 aaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||| ||||| ||||||||| || || |||||| |||||||||| |||||| ||  |||||||||||||||||||    
T  15120186 aaattgttttcgtaagctatcatggagagcttatcaaaataagcttaaaacagctaatgaacatgtcataagttgt 15120261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 616 - 663
Target Start/End: Complemental strand, 41809284 - 41809237
Alignment:
Q  616 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||| ||||||||| |||||||||| |||||||||||||||||||    
T  41809284 gcttatggaaataagctaaaaacaacttatgaacatgtcataagttgt 41809237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 592 - 659
Target Start/End: Original strand, 41817175 - 41817242
Alignment:
Q  592 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||| ||||| || || ||||||| ||||||||||||||||| || | |||||||||||||    
T  41817175 tattttcataaactatcctggagagcttatggaaataagctgaaaacaaattatcaacatgtcataag 41817242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 663
Target Start/End: Complemental strand, 26143701 - 26143631
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataagttgt 663  Q
    ||||||||||||| |||| ||  ||||||||||||||||||||| ||| ||||||| ||| ||||||||||    
T  26143701 ttttcataagctaacttggagaacttatgaaaataagctgaaaataacctgtgaacaatgacataagttgt 26143631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 664
Target Start/End: Original strand, 33942159 - 33942229
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgtc 664  Q
    ||||||||||| ||| |  || ||| |||||||| ||||||||||| ||| ||||||||||||||||||||    
T  33942159 ttttcataagccatcatagagagctaatgaaaattagctgaaaacagcttatgaacatgtcataagttgtc 33942229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 652
Target Start/End: Complemental strand, 38078471 - 38078413
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatg 652  Q
    |||||||||||||||||| || ||||||| |||| |||| |||||||||| ||||||||    
T  38078471 ttttcataagctatcttggagagcttatgtaaatgagctcaaaacaacttatgaacatg 38078413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 617 - 663
Target Start/End: Complemental strand, 44606148 - 44606102
Alignment:
Q  617 cttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||||| ||||||||||||||| || ||||||||||||||||    
T  44606148 cttatgaaaatcagctgaaaacaacttatggacatgtcataagttgt 44606102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 663
Target Start/End: Complemental strand, 1939393 - 1939324
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||||||||  || || ||||||| ||||||| |||||||| ||| || ||||||||||||||||    
T  1939393 ttttcataagctatactggagagcttatggaaataagttgaaaacagcttatggacatgtcataagttgt 1939324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 585 - 638
Target Start/End: Complemental strand, 3067449 - 3067396
Alignment:
Q  585 gttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaac 638  Q
    |||||| | ||||||||||||||||||||| | ||||||||||||||| |||||    
T  3067449 gttaaactgttttcataagctatcttgaagagtttatgaaaataagctaaaaac 3067396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 659
Target Start/End: Original strand, 7871652 - 7871717
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||||||||||| | |||||| ||||||| |||||||||||||||| ||| ||| ||| |||||||    
T  7871652 ttttcataagctcttttgaagagcttatggaaataagctgaaaacaccttatgatcatatcataag 7871717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 659
Target Start/End: Original strand, 8017443 - 8017508
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||||||||||||||||| ||  |||||||||||| || |||||||| || ||||||| |||||||    
T  8017443 ttttcataagctatcttggagaacttatgaaaatacgcagaaaacaaattatgaacatatcataag 8017508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 592 - 657
Target Start/End: Complemental strand, 9530791 - 9530726
Alignment:
Q  592 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcata 657  Q
    ||||||||||||||||| || || |||||||||| |||||| |||| ||||| || ||||||||||    
T  9530791 tattttcataagctatcctggagagcttatgaaagtaagctaaaaataacttatggacatgtcata 9530726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 663
Target Start/End: Original strand, 32821818 - 32821887
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||||||||| | ||| ||||||  |||||| ||||||||| ||| || ||||||||||||||||    
T  32821818 ttttcataagctatcctaaagagcttatagaaataaactgaaaacagcttatggacatgtcataagttgt 32821887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 663
Target Start/End: Original strand, 33941918 - 33941987
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||||||||| || | |||||| |||||| ||||| || ||| ||||| |||||||||||||    
T  33941918 ttttcataagctatcttggagagtttatgataataagttgaaagcagcttatgaacttgtcataagttgt 33941987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 663
Target Start/End: Complemental strand, 43065511 - 43065442
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||| |||| || || ||||||  ||||||||||||||||| || || ||||||||||||||||    
T  43065511 ttttcataagttatcgtggagagcttattgaaataagctgaaaacaatttatggacatgtcataagttgt 43065442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 663
Target Start/End: Original strand, 43141880 - 43141949
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||||||||| ||||| | ||||| ||||||  |||||||||||| ||  |||||||||||||||    
T  43141880 ttttcataagctatcctgaagagtttatggaaataaaatgaaaacaacttatgggcatgtcataagttgt 43141949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 595 - 643
Target Start/End: Complemental strand, 656837 - 656789
Alignment:
Q  595 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 643  Q
    ||||||||||||||||| || ||||||||||||||| ||||||| ||||    
T  656837 tttcataagctatcttgcagagcttatgaaaataagatgaaaactactt 656789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 601 - 661
Target Start/End: Complemental strand, 1893335 - 1893275
Alignment:
Q  601 aagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 661  Q
    ||||||||||| ||  ||| ||||||||||||||||| ||||| || ||||||||||||||    
T  1893335 aagctatcttggagaacttgtgaaaataagctgaaaataacttatgtacatgtcataagtt 1893275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 616 - 672
Target Start/End: Original strand, 12147488 - 12147544
Alignment:
Q  616 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgtccaaaataa 672  Q
    |||||||||||||| |||||||||| || ||||||||||||||| | ||| ||||||    
T  12147488 gcttatgaaaataaactgaaaacaatttatgaacatgtcataagctatcccaaataa 12147544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 592 - 648
Target Start/End: Complemental strand, 12464536 - 12464480
Alignment:
Q  592 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaa 648  Q
    |||||||||||||||||||| ||  ||| ||||||||||||||||| | ||||||||    
T  12464536 tattttcataagctatcttggagaacttgtgaaaataagctgaaaaaagcttgtgaa 12464480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 594 - 662
Target Start/End: Original strand, 35485926 - 35485994
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttg 662  Q
    |||| |||||||||| ||||| || |||| |||| ||||||||||| ||| ||||||| ||||||||||    
T  35485926 tttttataagctatcctgaagagcctatggaaatgagctgaaaacagcttatgaacatatcataagttg 35485994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 637
Target Start/End: Original strand, 1810673 - 1810716
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaa 637  Q
    |||| |||||||||||||||| | ||||||||||||||||||||    
T  1810673 tttttataagctatcttgaagagtttatgaaaataagctgaaaa 1810716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 603 - 650
Target Start/End: Complemental strand, 7928351 - 7928304
Alignment:
Q  603 gctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaaca 650  Q
    ||||||||| ||  ||||||||||||||||||||||||||| ||||||    
T  7928351 gctatcttggagaacttatgaaaataagctgaaaacaacttatgaaca 7928304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 616 - 655
Target Start/End: Complemental strand, 8820331 - 8820292
Alignment:
Q  616 gcttatgaaaataagctgaaaacaacttgtgaacatgtca 655  Q
    ||||||| |||||||||||||||| |||||||||||||||    
T  8820331 gcttatggaaataagctgaaaacagcttgtgaacatgtca 8820292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 657
Target Start/End: Complemental strand, 10563619 - 10563556
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcata 657  Q
    ||||||||||||||  ||||| ||||| |||||||||||||||| | ||| || ||||||||||    
T  10563619 ttttcataagctatgctgaagagcttaagaaaataagctgaaaatagcttatggacatgtcata 10563556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 600 - 643
Target Start/End: Original strand, 12464679 - 12464722
Alignment:
Q  600 taagctatcttgaagtgcttatgaaaataagctgaaaacaactt 643  Q
    |||||||||||||||  |||||||||||||||||| ||||||||    
T  12464679 taagctatcttgaagaacttatgaaaataagctgagaacaactt 12464722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 624 - 663
Target Start/End: Complemental strand, 30538204 - 30538165
Alignment:
Q  624 aaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||||||||||| || ||||||||||||||||    
T  30538204 aaataagctgaaaacaacttatggacatgtcataagttgt 30538165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 587 - 630
Target Start/End: Complemental strand, 36863693 - 36863650
Alignment:
Q  587 taaattattttcataagctatcttgaagtgcttatgaaaataag 630  Q
    |||||| |||||||||||||||||| || |||||||||||||||    
T  36863693 taaattgttttcataagctatcttggagagcttatgaaaataag 36863650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 592 - 659
Target Start/End: Original strand, 42420004 - 42420071
Alignment:
Q  592 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||||||| || |  ||||||| |||| |||||||||||| || |||||||| ||||||    
T  42420004 tattttcataagctatcctggatagcttatggaaatgagctgaaaacaatttatgaacatgacataag 42420071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 594 - 659
Target Start/End: Original strand, 1625909 - 1625975
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaaca-tgtcataag 659  Q
    |||||||||||||||||| ||  |||| |||||| ||||||||||| ||| |||||| |||||||||    
T  1625909 ttttcataagctatcttggagaacttacgaaaatcagctgaaaacatcttatgaacattgtcataag 1625975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 577 - 663
Target Start/End: Original strand, 7282988 - 7283074
Alignment:
Q  577 aaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||| |||| ||| | |||||||||||||| | | || ||||||| | ||||| |||||||||||| || |||| |||||||||||    
T  7282988 aaaatgaagtcaaactgttttcataagctatgtgggagagcttatggatataagatgaaaacaacttatggacatatcataagttgt 7283074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 616 - 658
Target Start/End: Original strand, 11063519 - 11063561
Alignment:
Q  616 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 658  Q
    ||||||||||||||||| |||||||||| || |||||||||||    
T  11063519 gcttatgaaaataagctaaaaacaacttatggacatgtcataa 11063561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 594 - 640
Target Start/End: Original strand, 15977994 - 15978040
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaa 640  Q
    |||||||||||||| ||| || | |||||||||||||||||||||||    
T  15977994 ttttcataagctattttggagagattatgaaaataagctgaaaacaa 15978040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 594 - 659
Target Start/End: Original strand, 26626882 - 26626948
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataag 659  Q
    |||||||||||||||||| ||  ||||||||||||| |||||||||  || ||||| ||||||||||    
T  26626882 ttttcataagctatcttgcagaacttatgaaaataacctgaaaacagattatgaacaatgtcataag 26626948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 594 - 656
Target Start/End: Complemental strand, 35378593 - 35378531
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcat 656  Q
    ||||| ||||| |||||| |  |||||||||||||||||||||| ||||| |||||| |||||    
T  35378593 ttttcgtaagcaatcttggatagcttatgaaaataagctgaaaataacttatgaacaagtcat 35378531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 584 - 658
Target Start/End: Complemental strand, 35993451 - 35993377
Alignment:
Q  584 agttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 658  Q
    ||||||||| ||| ||||||||||| |  ||  |||||||||||||||||||||||| || || ||| |||||||    
T  35993451 agttaaattgtttgcataagctatcatagagaacttatgaaaataagctgaaaacaatttatggacacgtcataa 35993377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 594 - 659
Target Start/End: Complemental strand, 40682455 - 40682390
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataag 659  Q
    |||||||||| |||||||| |  |||||||||||||| |||||||||||| ||||| ||||||||||    
T  40682455 ttttcataagatatcttga-gaacttatgaaaataagttgaaaacaacttatgaacaatgtcataag 40682390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 577 - 659
Target Start/End: Original strand, 41144202 - 41144284
Alignment:
Q  577 aaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||||||||  ||||| ||||||||||||| |||| || | || || ||||||||| |||||||||| |  ||||||||||||    
T  41144202 aaaataaagacaaattgttttcataagctaacttggagagtttctggaaataagctaaaaacaacttattgacatgtcataag 41144284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 594 - 640
Target Start/End: Original strand, 44590043 - 44590089
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaa 640  Q
    |||||||||||||||||||||  ||| ||| ||||||||||||||||    
T  44590043 ttttcataagctatcttgaagaacttgtgagaataagctgaaaacaa 44590089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 592 - 637
Target Start/End: Complemental strand, 1056416 - 1056371
Alignment:
Q  592 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaa 637  Q
    ||||||||||||||||||||||| | ||||  ||||||||||||||    
T  1056416 tattttcataagctatcttgaagagtttatagaaataagctgaaaa 1056371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 663
Target Start/End: Complemental strand, 8187514 - 8187445
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||||||| | || || | ||||| |||||| |||||||||||||| ||| || |||||||||||    
T  8187514 ttttcataagctaccatggagagattatggaaataacctgaaaacaacttgcgaaaatttcataagttgt 8187445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 595 - 663
Target Start/End: Original strand, 11488287 - 11488353
Alignment:
Q  595 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||||| || || | ||||| |||||||||||||||||||| ||| ||  |||||||||||    
T  11488287 tttcataagctatcctggagagattatgcaaataagctgaaaacaacttatgacca--tcataagttgt 11488353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 592 - 664
Target Start/End: Original strand, 16398121 - 16398194
Alignment:
Q  592 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataagttgtc 664  Q
    |||||||||||| ||| ||| ||  ||||||||||||||||||||||| |||  || | |||||||||||||||    
T  16398121 tattttcataagttatgttggagaacttatgaaaataagctgaaaacagcttacgagcaatgtcataagttgtc 16398194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 655
Target Start/End: Complemental strand, 19333386 - 19333325
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtca 655  Q
    ||||| ||| |||| ||| || ||||||||||||||||||| |||| ||| |||||||||||    
T  19333386 ttttcttaaactatattggagagcttatgaaaataagctgagaacagcttatgaacatgtca 19333325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 587 - 663
Target Start/End: Complemental strand, 30552712 - 30552635
Alignment:
Q  587 taaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaa-caacttgtgaacatgtcataagttgt 663  Q
    |||||||||||||||| ||||| |  || ||||||| ||||||||| |||| |||||| |  ||||||||||||||||    
T  30552712 taaattattttcataaactatcctagagagcttatggaaataagctaaaaaccaacttattgacatgtcataagttgt 30552635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 618 - 663
Target Start/End: Complemental strand, 32614985 - 32614940
Alignment:
Q  618 ttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||| ||||| ||||||||||| | |||||||||||||||||||    
T  32614985 ttatgagaataatctgaaaacaacatatgaacatgtcataagttgt 32614940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 659
Target Start/End: Original strand, 33256749 - 33256814
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||| ||| |||||  | |||||||||||||||| ||||  || |||||||||||||||    
T  33256749 ttttcataagccatcctgaagaccgtatgaaaataagctgagaacagtttatgaacatgtcataag 33256814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 663
Target Start/End: Complemental strand, 36415734 - 36415666
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||||||||| || ||  |||| ||||||||| |||||||||||| || |||||| |||||||||    
T  36415734 ttttcataagctatcatgtagaacttacgaaaataagatgaaaacaacttatgcacatgt-ataagttgt 36415666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 659
Target Start/End: Original strand, 40158727 - 40158792
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||||||||| |||  || || ||||||| || ||||||||||||||||| | |||||||||||||    
T  40158727 ttttcataagttattctggagagcttatgtaattaagctgaaaacaacttataaacatgtcataag 40158792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 663
Target Start/End: Complemental strand, 42817437 - 42817368
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||||||||  ||||| ||||||| || |||||| ||||||||||  ||||||| | ||||||||    
T  42817437 ttttcataagctattctgaagagcttatggaagtaagctaaaaacaacttaagaacatgccgtaagttgt 42817368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 635
Target Start/End: Original strand, 44644287 - 44644328
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaa 635  Q
    |||||| || ||||||||||| ||||||||||||||||||||    
T  44644287 ttttcaaaaactatcttgaagagcttatgaaaataagctgaa 44644328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 618 - 663
Target Start/End: Original strand, 45314901 - 45314946
Alignment:
Q  618 ttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||| ||||||||||||| | || ||||||||||||||    
T  45314901 ttatgaaaataaactgaaaacaacttataaatatgtcataagttgt 45314946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 1e-24; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 77 - 326
Target Start/End: Complemental strand, 25484514 - 25484265
Alignment:
Q  77 aatagtagccatctcttccaaacaccacgttgaatcggcata-tctttgagagaagacaacaatagaaattcttgaactttgaattgcttgtagaagttg 175  Q
    ||||| |||||| || ||||||||||| ||||||   ||||| |||||| ||||| ||||| |||||||| | |||   |||||||||||||||||||||    
T  25484514 aatagcagccatttcatccaaacaccatgttgaagaagcataatctttg-gagaaaacaacgatagaaatgcgtgactgttgaattgcttgtagaagttg 25484416  T
Q  176 cggtgaaagggattctcctttctcaagcctttgatcatccttgaaggcaaaaataccctttctttttagatgagcataaagatgatcaacaaaagtgttg 275  Q
     ||||||| || |||||||||||  |||   |  |||||||||||||  |||||||| ||||| || |||||||| || ||||| |||||||| |  ||     
T  25484415 gggtgaaatggcttctcctttctgtagctgcttgtcatccttgaaggtgaaaataccttttctattgagatgagcgtagagatggtcaacaaaggaatta 25484316  T
Q  276 cgaacgtcaggacctctaaaacttataaacacatcgtatctacagctttgg 326  Q
    ||   ||||| |||||| ||||| || ||||||||||||||| ||||||||    
T  25484315 cgggtgtcagaacctctgaaactgatgaacacatcgtatctatagctttgg 25484265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 574 - 663
Target Start/End: Original strand, 7244669 - 7244758
Alignment:
Q  574 gataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||| ||||| ||| | |||||||||||||| ||| || |||||||||||||||||||||||||||| ||| |||||||||| ||||    
T  7244669 gataaaagaaagtcaaactgttttcataagctatattggagagcttatgaaaataagctgaaaacaacttatgagcatgtcataaattgt 7244758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 576 - 659
Target Start/End: Complemental strand, 22551484 - 22551401
Alignment:
Q  576 taaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||| ||||| ||||||||||  |||||| || ||||||| |||||||||||||||||| | |||||||||||||||    
T  22551484 taaaataaagtcaaattcttttcataagtaatcttggagagcttatgtaaataagctgaaaacaacatttgaacatgtcataag 22551401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 594 - 663
Target Start/End: Original strand, 12110369 - 12110438
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||||||||||||  ||||||||||||| || ||||||  ||||||||||||||||||||||    
T  12110369 ttttcataagctatcttgaagaacttatgaaaataatctaaaaacagtttgtgaacatgtcataagttgt 12110438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 585 - 658
Target Start/End: Complemental strand, 48917416 - 48917341
Alignment:
Q  585 gttaaattattttcataagctatcttgaagtgcttatgaaaataagctg--aaaacaacttgtgaacatgtcataa 658  Q
    ||||| || |||||||||||||||||| || ||||||||||||||||||  || ||||||||||||||||||||||    
T  48917416 gttaagttgttttcataagctatcttggagagcttatgaaaataagctggaaacacaacttgtgaacatgtcataa 48917341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 592 - 639
Target Start/End: Complemental strand, 12792626 - 12792579
Alignment:
Q  592 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 639  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12792626 tattttcataagctatcttgaagagcttatgaaaataagctgaaaaca 12792579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 594 - 671
Target Start/End: Original strand, 529384 - 529461
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgtccaaaata 671  Q
    |||||||||||||||||| || ||||||||||||| | |||||||| ||| ||||| ||||||||||| ||| |||||    
T  529384 ttttcataagctatcttggagagcttatgaaaatatgttgaaaacagcttatgaacttgtcataagttctcccaaata 529461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 314
Target Start/End: Original strand, 25436405 - 25436562
Alignment:
Q  157 gaattgcttgtagaagttgcggtgaaagggattctcctttctcaagcctttgatcatccttgaaggcaaaaataccctttctttttagatgagcataaag 256  Q
    ||||||||||||||||||| ||||||| || ||||||||| |  |||   |  ||||||||||||| ||||||||| |||||   ||||||||  |  ||    
T  25436405 gaattgcttgtagaagttggggtgaaatggcttctcctttttggagctgcttgtcatccttgaaggtaaaaataccttttctaactagatgagagtggag 25436504  T
Q  257 atgatcaacaaaagtgttgcgaacgtcaggacctctaaaacttataaacacatcgtat 314  Q
    ||||||||||||||  |||||    |||| |||||||||||| || ||||||||||||    
T  25436505 atgatcaacaaaagaattgcgggtctcagaacctctaaaactgatgaacacatcgtat 25436562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 310
Target Start/End: Complemental strand, 25636762 - 25636522
Alignment:
Q  70 attcagcaatagtagccatctcttccaaacaccacgttgaatcggcata-tctttgagagaagacaacaatagaaattcttgaactttgaattgcttgta 168  Q
    ||||| |||||| |||||| || ||||||||||| |||||    ||||| |||||| ||||||||||  |||||||  |  |||  || |||||| || |    
T  25636762 attcatcaatagcagccatttcatccaaacaccatgttgatgaagcataatctttg-gagaagacaatgatagaaacccgcgaatctttaattgcctgca 25636664  T
Q  169 gaagttgcggtgaaagggattctcctttctcaagcctttgatcatccttgaaggcaaaaataccctttctttttagatgagcataaagatgatcaacaaa 268  Q
     ||||||  |||||| |||||| ||||||| ||||  ||  |||||||||||||   ||||||| |||||  | ||||||||||| ||||| ||||||||    
T  25636663 aaagttggagtgaaatggattcgcctttctgaagcgatttgtcatccttgaaggtcgaaataccttttctagtgagatgagcatagagatggtcaacaaa 25636564  T
Q  269 agtgttgcgaacgtcaggacctctaaaacttataaacacatc 310  Q
     ||||||||   |||||||||||| ||||| ||||| |||||    
T  25636563 ggtgttgcgggtgtcaggacctctgaaactgataaatacatc 25636522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 70 - 317
Target Start/End: Complemental strand, 25442570 - 25442323
Alignment:
Q  70 attcagcaatagtagccatctcttccaaacaccacgttgaatcggcata-tctttgagagaagacaacaatagaaattcttgaactttgaattgcttgta 168  Q
    ||||| |||||| |||||| || ||||||||||| |||||    ||||| |||||| ||||||||||  |||||||  |  |||  || |||||| || |    
T  25442570 attcatcaatagcagccatttcatccaaacaccatgttgatgaagcataatctttg-gagaagacaatgatagaaacccgcgaatctttaattgcctgca 25442472  T
Q  169 gaagttgcggtgaaagggattctcctttctcaagcctttgatcatccttgaaggcaaaaataccctttctttttagatgagcataaagatgatcaacaaa 268  Q
     ||||||  |||||| |||||| ||||||| ||||  ||  |||||||||||| | |||||||| |||||  | |||||| | || ||||| ||||||||    
T  25442471 aaagttggagtgaaatggattcgcctttctgaagcgatttgtcatccttgaagacgaaaataccttttctagtgagatgatcgtagagatggtcaacaaa 25442372  T
Q  269 agtgttgcgaacgtcaggacctctaaaacttataaacacatcgtatcta 317  Q
     |  |||||   |||||||||||||||||| || |||||||||||||||    
T  25442371 ggaattgcgggtgtcaggacctctaaaactgatgaacacatcgtatcta 25442323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 575 - 661
Target Start/End: Original strand, 34035907 - 34035994
Alignment:
Q  575 ataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataagtt 661  Q
    |||| ||||||||||||| |||||||||||||||||  ||  |||  ||||||||| |||||||||||| ||||| ||||||||||||    
T  34035907 ataatataaagttaaattgttttcataagctatcttagagaacttgcgaaaataagttgaaaacaacttatgaacaatgtcataagtt 34035994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 594 - 663
Target Start/End: Original strand, 46825107 - 46825178
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatga-aaataagct-gaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||||||||| ||||||||||| |||||||||  ||||||||| ||| ||||||||||||||||    
T  46825107 ttttcataagctatcttggagtgcttatgagaaataagctaaaaaacaactcgtggacatgtcataagttgt 46825178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 643
Target Start/End: Original strand, 25596042 - 25596091
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 643  Q
    |||||||||||||||||| || ||||||||||||||| ||||||||||||    
T  25596042 ttttcataagctatcttggagagcttatgaaaataagttgaaaacaactt 25596091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 587 - 659
Target Start/End: Complemental strand, 6552360 - 6552288
Alignment:
Q  587 taaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||| ||||||||||| ||||| || || | |||||||||||||||||||||| ||| |||| ||||||||||    
T  6552360 taaactattttcataaactatcatgcagagtttatgaaaataagctgaaaacagcttatgaatatgtcataag 6552288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 574 - 659
Target Start/End: Complemental strand, 43250782 - 43250695
Alignment:
Q  574 gataaaataaagttaaattattttc--ataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||||||||||||||| |  |||||  ||||||||| ||| || ||||||||| |||| |||||||||||||  ||||||||||||||    
T  43250782 gataaaataaagttaattgtttttcgtataagctattttggagagcttatgaatataaactgaaaacaacttacgaacatgtcataag 43250695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 594 - 658
Target Start/End: Complemental strand, 44151541 - 44151477
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 658  Q
    ||||||||| ||||||||||  ||||||| |||||||||||||||| ||| || |||||||||||    
T  44151541 ttttcataaactatcttgaaaagcttatggaaataagctgaaaacatcttatggacatgtcataa 44151477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 599 - 661
Target Start/End: Original strand, 21247939 - 21248002
Alignment:
Q  599 ataagctatcttgaagtgctta-tgaaaataagctgaaaacaacttgtgaacatgtcataagtt 661  Q
    |||| |||||||| || ||||| |||||||||||| |||||||||| |||||||||||||||||    
T  21247939 ataacctatcttggagagcttactgaaaataagcttaaaacaacttatgaacatgtcataagtt 21248002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 616 - 663
Target Start/End: Original strand, 46082067 - 46082114
Alignment:
Q  616 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||||||||||||||||||| ||  |||||||||||||||    
T  46082067 gcttatgaaaataagctgaaaacaacttatggtcatgtcataagttgt 46082114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 616 - 663
Target Start/End: Complemental strand, 47134796 - 47134749
Alignment:
Q  616 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||||||||||||||||||| || || |||||||||||||    
T  47134796 gcttatgaaaataagctgaaaacaacttatggacgtgtcataagttgt 47134749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 660
Target Start/End: Original strand, 4966165 - 4966231
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagt 660  Q
    ||||||||||| ||| ||||| ||||||| |||||| ||||||||||||| || |||| ||||||||    
T  4966165 ttttcataagccatcctgaagagcttatggaaataaactgaaaacaacttatggacatatcataagt 4966231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 617 - 663
Target Start/End: Original strand, 11048059 - 11048105
Alignment:
Q  617 cttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||||||    
T  11048059 cttatgagaataagctgaaaacagcttatgaacatgtcataagttgt 11048105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 605 - 663
Target Start/End: Complemental strand, 25670636 - 25670578
Alignment:
Q  605 tatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||| || |||| |||||||||||||||||||| || | |||||||||||||||||    
T  25670636 tatcttggagagcttgtgaaaataagctgaaaacaatttattaacatgtcataagttgt 25670578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 663
Target Start/End: Complemental strand, 9423655 - 9423586
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||| |||||||||| || || |||| |  |||||||||||||||||||| |||||||||||||| ||||    
T  9423655 ttttaataagctatcctggagagcttcttgaaataagctgaaaacaacttatgaacatgtcataaattgt 9423586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 592 - 637
Target Start/End: Complemental strand, 12792687 - 12792642
Alignment:
Q  592 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaa 637  Q
    ||||||||||||||||||||||| || |||| ||||||||||||||    
T  12792687 tattttcataagctatcttgaagagcatatggaaataagctgaaaa 12792642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 655
Target Start/End: Complemental strand, 24363662 - 24363601
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtca 655  Q
    ||||||||||||||| || || | ||||| |||||||||||||||||||| || ||||||||    
T  24363662 ttttcataagctatcctggagaggttatggaaataagctgaaaacaacttatggacatgtca 24363601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 658
Target Start/End: Original strand, 29286804 - 29286864
Alignment:
Q  598 cataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 658  Q
    |||||| ||| |||||  ||||||| |||||||||||||||||||  ||||||||||||||    
T  29286804 cataagttattttgaaaagcttatgtaaataagctgaaaacaactgatgaacatgtcataa 29286864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 591 - 663
Target Start/End: Original strand, 30316968 - 30317040
Alignment:
Q  591 ttattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||||||| ||||||||| ||| || ||||||||| |||||||| ||| | ||||| | |||||||||    
T  30316968 ttattttcataaggtatcttgaaatgcatacgaaaataagttgaaaacagcttattaacattttataagttgt 30317040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 592 - 639
Target Start/End: Complemental strand, 12792561 - 12792514
Alignment:
Q  592 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 639  Q
    ||||||||||||||||||||||| ||||||  ||||||||||| ||||    
T  12792561 tattttcataagctatcttgaagagcttattgaaataagctgataaca 12792514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 624 - 663
Target Start/End: Complemental strand, 20888425 - 20888386
Alignment:
Q  624 aaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||||||||||| |||||||| ||||||||||    
T  20888425 aaataagctgaaaacaacttatgaacatggcataagttgt 20888386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 600 - 659
Target Start/End: Original strand, 35267377 - 35267436
Alignment:
Q  600 taagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||| ||||||| || ||||||  |||||||||||||||||| | |||||||||||||||    
T  35267377 taagttatcttggagagcttatagaaataagctgaaaacaacctatgaacatgtcataag 35267436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 610 - 661
Target Start/End: Original strand, 44808183 - 44808234
Alignment:
Q  610 tgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 661  Q
    ||||| ||||||||||||||||||||||||  || || ||||||||||||||    
T  44808183 tgaagggcttatgaaaataagctgaaaacaggttatggacatgtcataagtt 44808234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 574 - 637
Target Start/End: Complemental strand, 5018023 - 5017958
Alignment:
Q  574 gataaaataaagttaaattattttc--ataagctatcttgaagtgcttatgaaaataagctgaaaa 637  Q
    ||||||||||||| |||||| | ||  |||||||||||||||  ||||||| ||||||||||||||    
T  5018023 gataaaataaagtcaaattactctcttataagctatcttgaaaagcttatggaaataagctgaaaa 5017958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 317
Target Start/End: Original strand, 25478885 - 25479047
Alignment:
Q  155 ttgaattgcttgtagaagttgcggtgaaagggattctcctttctcaagcctttgatcatccttgaaggcaaaaataccctttctttttagatgagcataa 254  Q
    ||||||||| ||| |||||||  |||||| |||||| |||||||| |||   || |||||| |||| |  |||||||| |||||  | |||||||||||     
T  25478885 ttgaattgcctgtcgaagttggagtgaaatggattcccctttctcgagctgctggtcatccatgaacgtgaaaataccttttctagtgagatgagcatag 25478984  T
Q  255 agatgatcaacaaaagtgttgcgaacgtcaggacctctaaaacttataaacacatcgtatcta 317  Q
    ||||| ||| |||| || || ||   ||||  |||||| ||||| |||||||| |||||||||    
T  25478985 agatggtcagcaaaggttttacgggtgtcaatacctctgaaactgataaacacgtcgtatcta 25479047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 621 - 663
Target Start/End: Original strand, 36537944 - 36537986
Alignment:
Q  621 tgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||| ||||| |||||||||| |||||||||||||||||||    
T  36537944 tgaaaaaaagctaaaaacaacttatgaacatgtcataagttgt 36537986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 574 - 653
Target Start/End: Original strand, 42656482 - 42656563
Alignment:
Q  574 gataaaataaagttaaattattttc--ataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgt 653  Q
    ||||||||||||| |||| |||||   ||||||||||||| || |||||||||||||||| | |||||  || |||||||||    
T  42656482 gataaaataaagtcaaatcatttttgtataagctatcttggagagcttatgaaaataagccgcaaacattttatgaacatgt 42656563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 617 - 659
Target Start/End: Complemental strand, 43219682 - 43219640
Alignment:
Q  617 cttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||    
T  43219682 cttatgagaataagctgaaaacagcttatgaacatgtcataag 43219640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 659
Target Start/End: Original strand, 9038121 - 9038185
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||| ||||| || ||  ||| |||||||||||||||||||| || |||||||||||||||    
T  9038121 ttttcataaactatcatggagaacttgtgaaaataagctgaaaacaa-ttatgaacatgtcataag 9038185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 618 - 663
Target Start/End: Complemental strand, 15740448 - 15740403
Alignment:
Q  618 ttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||||||| | |||||| ||| |||||||||||||||||||    
T  15740448 ttatgaaaataagttaaaaacagcttatgaacatgtcataagttgt 15740403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 639
Target Start/End: Complemental strand, 18962633 - 18962588
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 639  Q
    |||||||||||||||||| ||  |||||||||||||| ||||||||    
T  18962633 ttttcataagctatcttggaggccttatgaaaataaggtgaaaaca 18962588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 639
Target Start/End: Complemental strand, 18965771 - 18965726
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 639  Q
    |||||||||||||||||| ||  |||||||||| ||||||||||||    
T  18965771 ttttcataagctatcttggaggtcttatgaaaacaagctgaaaaca 18965726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 643
Target Start/End: Complemental strand, 27378889 - 27378840
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 643  Q
    ||||||||| ||||| || || |||||||||||||| |||||||||||||    
T  27378889 ttttcataaactatcctggagagcttatgaaaataaactgaaaacaactt 27378840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 663
Target Start/End: Complemental strand, 33646021 - 33645953
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||||||| || | ||||||| |||||| || |||||||||| |  ||||||||||||||||    
T  33646021 ttttcataagctatctgga-gagcttatggaaataacctaaaaacaacttatagacatgtcataagttgt 33645953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 663
Target Start/End: Complemental strand, 45859587 - 45859519
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||  ||||| ||||| ||||||  |||||||||||||||||| | ||||||||||||| |||||    
T  45859587 ttttcatagactatcatgaagagcttatagaaataagctgaaaacaac-tatgaacatgtcatatgttgt 45859519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 639
Target Start/End: Complemental strand, 46104628 - 46104583
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 639  Q
    ||||||||||||||  ||||| |||||||||||||||||| |||||    
T  46104628 ttttcataagctatgctgaagagcttatgaaaataagctggaaaca 46104583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 655
Target Start/End: Complemental strand, 47559662 - 47559601
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtca 655  Q
    |||||||||| ||| ||| ||  ||||||||||| ||| ||||||||||| |||||||||||    
T  47559662 ttttcataagttattttggagaacttatgaaaatgagccgaaaacaacttatgaacatgtca 47559601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 5e-21; HSPs: 85)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 595 - 663
Target Start/End: Complemental strand, 37593744 - 37593676
Alignment:
Q  595 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  37593744 tttcataagctattttgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagttgt 37593676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 594 - 659
Target Start/End: Original strand, 34290245 - 34290310
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||| |||| ||||||||||    
T  34290245 ttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaatatgtcataag 34290310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 598 - 663
Target Start/End: Complemental strand, 46252739 - 46252674
Alignment:
Q  598 cataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||||| || |||||||||||||| ||||||||||||| |||||||||||||||||||    
T  46252739 cataagctatcttggagagcttatgaaaataacctgaaaacaacttatgaacatgtcataagttgt 46252674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 594 - 659
Target Start/End: Complemental strand, 10199469 - 10199404
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||||||||||||| ||  || |||||||||||||||||||||||||||| |||||||||||||||    
T  10199469 ttttcataagctattttagagagcttatgaaaataagctgaaaacaacttatgaacatgtcataag 10199404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 594 - 659
Target Start/End: Complemental strand, 7137059 - 7136994
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||||||||||||||||| ||  ||||||||||||||||||||| ||||| |||| ||||||||||    
T  7137059 ttttcataagctatcttggagaacttatgaaaataagctgaaaataacttatgaatatgtcataag 7136994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 594 - 658
Target Start/End: Original strand, 25479590 - 25479654
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 658  Q
    ||||||||||||||| |  || |||||||||||||||||||||||||||  ||||||||||||||    
T  25479590 ttttcataagctatcctagagagcttatgaaaataagctgaaaacaactaatgaacatgtcataa 25479654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 599 - 659
Target Start/End: Complemental strand, 28689508 - 28689448
Alignment:
Q  599 ataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||| |  |||||||||||||||||||||||||||| || ||||||||||||    
T  28689508 ataagctatcttggaaagcttatgaaaataagctgaaaacaacttatggacatgtcataag 28689448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 592 - 659
Target Start/End: Original strand, 6292500 - 6292567
Alignment:
Q  592 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||| ||| |||| ||| || |||||||||||||||||||||||| ||| |||||||||||||||    
T  6292500 tattttcgtaaactattttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataag 6292567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 596 - 663
Target Start/End: Complemental strand, 31517799 - 31517732
Alignment:
Q  596 ttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||| || ||||| || |||||||||||||||||||||||| ||| |||||||||||| ||||||    
T  31517799 ttcataatctgtcttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcatgagttgt 31517732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 656
Target Start/End: Complemental strand, 37842416 - 37842354
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcat 656  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||  ||| ||||||||||||    
T  37842416 ttttcataagctatcttgaagaacttataaaaataagctgaaaactgcttatgaacatgtcat 37842354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 604 - 661
Target Start/End: Original strand, 8016276 - 8016333
Alignment:
Q  604 ctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 661  Q
    |||||||| || ||||| ||||||||||||||||||| || |||||||||||||||||    
T  8016276 ctatcttggagagcttaggaaaataagctgaaaacaagttatgaacatgtcataagtt 8016333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 659
Target Start/End: Original strand, 10854742 - 10854807
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||  ||||| ||||  ||||| |||||||||||||||||| |||||||||||||||||||    
T  10854742 ttttcatatactatcctgaacagcttaagaaaataagctgaaaacagcttgtgaacatgtcataag 10854807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 592 - 657
Target Start/End: Complemental strand, 14630029 - 14629964
Alignment:
Q  592 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcata 657  Q
    |||||||||||||||||||| ||   ||||| |||||||||||||||||||| ||||||| |||||    
T  14630029 tattttcataagctatcttggagactttatggaaataagctgaaaacaacttatgaacatatcata 14629964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 643
Target Start/End: Complemental strand, 26779986 - 26779937
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 643  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  26779986 ttttcataagctatcttgaagaacttatgaaaataagttgaaaacaactt 26779937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 659
Target Start/End: Original strand, 27140487 - 27140552
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||| |||||||||| || || ||||||| |||||||||||||||||||| || ||||||||||||    
T  27140487 tttttataagctatcatggagagcttatgcaaataagctgaaaacaacttatggacatgtcataag 27140552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 639
Target Start/End: Original strand, 43332493 - 43332538
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 639  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||    
T  43332493 ttttcataagctatcttgaagagcttattaaaataagctgaaaaca 43332538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 594 - 658
Target Start/End: Original strand, 4576814 - 4576878
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 658  Q
    |||||||||||||| |||||   ||||||||||||||||||| ||||||| | ||||||||||||    
T  4576814 ttttcataagctatattgaataacttatgaaaataagctgaacacaacttataaacatgtcataa 4576878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 599 - 659
Target Start/End: Complemental strand, 5887050 - 5886990
Alignment:
Q  599 ataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||||| |||||| ||  |||| |||||||||||||||||||||| |||||||||||||||    
T  5887050 ataagccatcttggagaacttacgaaaataagctgaaaacaacttatgaacatgtcataag 5886990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 594 - 661
Target Start/End: Original strand, 19389910 - 19389978
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagct-gaaaacaacttgtgaacatgtcataagtt 661  Q
    |||||||||||||||||| || |||| ||||||||||||  |||||||||| ||||||| |||||||||    
T  19389910 ttttcataagctatcttggagagcttgtgaaaataagctaaaaaacaacttatgaacatatcataagtt 19389978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 585 - 641
Target Start/End: Complemental strand, 26462011 - 26461955
Alignment:
Q  585 gttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaac 641  Q
    ||||||| || ||||||||||||| || || ||||||||||||||||||||||||||    
T  26462011 gttaaatcatcttcataagctatcctgcagagcttatgaaaataagctgaaaacaac 26461955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 599 - 661
Target Start/End: Original strand, 15784343 - 15784406
Alignment:
Q  599 ataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataagtt 661  Q
    ||||||||||||| ||  ||| |||||||||||| |||||||||||||||| ||||||||||||    
T  15784343 ataagctatcttggagaacttgtgaaaataagctaaaaacaacttgtgaacaatgtcataagtt 15784406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 600 - 659
Target Start/End: Complemental strand, 38170745 - 38170686
Alignment:
Q  600 taagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||||||  |||||| ||||| ||||| |||||||||||||||| |||||||||||||||    
T  38170745 taagctaatttgaagagcttaggaaaacaagctgaaaacaacttatgaacatgtcataag 38170686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 594 - 661
Target Start/End: Complemental strand, 38867892 - 38867825
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 661  Q
    |||||||||| ||||||||||  |||||||||||||||| |||||||||  || |||| |||||||||    
T  38867892 ttttcataagttatcttgaagaacttatgaaaataagctaaaaacaactgatggacatatcataagtt 38867825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 660
Target Start/End: Complemental strand, 7218135 - 7218069
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagt 660  Q
    ||||||||| ||||| || ||  |||||||||||||| |||||||| ||||||||| ||||||||||    
T  7218135 ttttcataacctatcctggagaacttatgaaaataagttgaaaacagcttgtgaacgtgtcataagt 7218069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 593 - 651
Target Start/End: Original strand, 15361048 - 15361106
Alignment:
Q  593 attttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacat 651  Q
    ||||||||  |||||| || || |||||||||||||||||||||||||||| |||||||    
T  15361048 attttcattggctatcctggagagcttatgaaaataagctgaaaacaacttatgaacat 15361106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 574 - 659
Target Start/End: Complemental strand, 30815738 - 30815649
Alignment:
Q  574 gataaaataaagttaaattattttcata-----agctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||||||| ||||||||||     |||| | ||||||  |||||||||||||||||||||||  || |||||||||||||||    
T  30815738 gataaaataaagttaaactattttcatataagtagct-tgttgaagaacttatgaaaataagctgaaaacattttatgaacatgtcataag 30815649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 610 - 663
Target Start/End: Original strand, 42397749 - 42397803
Alignment:
Q  610 tgaagtgcttatgaaaat-aagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||||||| |||| |||||||||||||||| |||||||| ||||||||||    
T  42397749 tgaagtgcttatggaaattaagctgaaaacaacttatgaacatgccataagttgt 42397803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 616 - 658
Target Start/End: Original strand, 47877140 - 47877182
Alignment:
Q  616 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 658  Q
    |||||||||||||||||||||||||||| ||| ||||||||||    
T  47877140 gcttatgaaaataagctgaaaacaacttatgagcatgtcataa 47877182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 639
Target Start/End: Original strand, 5047155 - 5047200
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 639  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  5047155 ttttcataagctatcatgaagagcttatggaaataagctgaaaaca 5047200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 655
Target Start/End: Complemental strand, 7262579 - 7262518
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtca 655  Q
    ||||||||||||||| ||||| |||| || ||||||| |||||||| ||| |||||||||||    
T  7262579 ttttcataagctatcctgaagagcttgtggaaataaggtgaaaacagcttatgaacatgtca 7262518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 598 - 639
Target Start/End: Original strand, 7472324 - 7472365
Alignment:
Q  598 cataagctatcttgaagtgcttatgaaaataagctgaaaaca 639  Q
    |||||||||||||| || ||||||||||||||||||||||||    
T  7472324 cataagctatcttggagagcttatgaaaataagctgaaaaca 7472365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 643
Target Start/End: Complemental strand, 12564560 - 12564511
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 643  Q
    |||||||||||||||||| ||  |||||| ||||||||||||||||||||    
T  12564560 ttttcataagctatcttggagaacttatggaaataagctgaaaacaactt 12564511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 574 - 663
Target Start/End: Complemental strand, 23373393 - 23373305
Alignment:
Q  574 gataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||||||| ||  | ||||||||||||||| ||||| |||||   ||||||||||||||| |  |||| ||||||||||||||||    
T  23373393 gataaaataaagtcaatctgttttcataagctatcctgaagagcttacagaaataagctgaaaac-agatgtggacatgtcataagttgt 23373305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 659
Target Start/End: Original strand, 31118052 - 31118117
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||| | ||| |  |||||| |||||||||||||||||||  |||||||||||||||    
T  31118052 ttttcataagctaccctgatgaacttatggaaataagctgaaaacaactgatgaacatgtcataag 31118117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 578 - 659
Target Start/End: Complemental strand, 48748682 - 48748601
Alignment:
Q  578 aaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||||| |||||||||||||||||| |  | |||||  |||||||| || | ||||| || ||||||||||||    
T  48748682 aaataaagttaaattgttttcataagctatcttggacagtttatggtaataagctaaacataacttatggacatgtcataag 48748601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 659
Target Start/End: Original strand, 52190138 - 52190203
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||||| || || ||||| |||||||||||||||||  |||||| || |||||||||    
T  52190138 ttttcataagctatcatggagagcttacgaaaataagctgaaaacggcttgtggacttgtcataag 52190203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 594 - 661
Target Start/End: Complemental strand, 1510027 - 1509959
Alignment:
Q  594 ttttcataagctatctt-gaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 661  Q
    ||||||||| ||||||| | |||  |||||||||||||||||||||| ||  |||||||||||||||||    
T  1510027 ttttcataacctatcttaggagtatttatgaaaataagctgaaaacagctaatgaacatgtcataagtt 1509959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 591 - 663
Target Start/End: Complemental strand, 4699679 - 4699607
Alignment:
Q  591 ttattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||| |||||  | || ||||||  ||||||||| |||||| ||| |||||||||||||||||||    
T  4699679 ttattttcataaactatcccggagagcttatagaaataagctaaaaacagcttatgaacatgtcataagttgt 4699607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 595 - 643
Target Start/End: Complemental strand, 11893653 - 11893605
Alignment:
Q  595 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 643  Q
    ||||||||||||| |||||| | ||||| ||||||||||||||||||||    
T  11893653 tttcataagctattttgaagagtttatggaaataagctgaaaacaactt 11893605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 575 - 663
Target Start/End: Complemental strand, 29834985 - 29834897
Alignment:
Q  575 ataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||| ||||| ||||||||||||||| || || ||||||| ||||||  |||||| | ||| || ||| ||| ||||||||    
T  29834985 ataaaataaagtcaaattgttttcataagctatcatgtagagcttatggaaataaattgaaaaaagcttatggacacgtcgtaagttgt 29834897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 594 - 658
Target Start/End: Original strand, 30257692 - 30257756
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 658  Q
    ||||||||| ||||| || || ||||||  |||||||||||||||| ||| ||||||||||||||    
T  30257692 ttttcataaactatcctggagggcttatagaaataagctgaaaacagcttatgaacatgtcataa 30257756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 574 - 659
Target Start/End: Complemental strand, 35707281 - 35707194
Alignment:
Q  574 gataaaataaagttaaattattttcat--aagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||||||| |||| ||| | |||||||  ||| |||| || || ||||||||||||| |||||||||||||||||  |||||||||||    
T  35707281 gataaaattaagtcaaactgttttcatgtaagttatcctgtagagcttatgaaaatatgctgaaaacaacttgtgggcatgtcataag 35707194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 602 - 650
Target Start/End: Complemental strand, 38503518 - 38503470
Alignment:
Q  602 agctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaaca 650  Q
    |||||||||| ||  ||||||||||||||||||||||||||| ||||||    
T  38503518 agctatcttggagaacttatgaaaataagctgaaaacaacttatgaaca 38503470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 624 - 663
Target Start/End: Original strand, 3223706 - 3223745
Alignment:
Q  624 aaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||||||||||| | |||||||||||||||||    
T  3223706 aaataagctgaaaacaacttataaacatgtcataagttgt 3223745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 617 - 660
Target Start/End: Original strand, 3224455 - 3224498
Alignment:
Q  617 cttatgaaaataagctgaaaacaacttgtgaacatgtcataagt 660  Q
    |||||||||||||||||| |||||||| || |||||||||||||    
T  3224455 cttatgaaaataagctgagaacaacttatggacatgtcataagt 3224498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 592 - 659
Target Start/End: Original strand, 4445715 - 4445782
Alignment:
Q  592 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||||  |||| || |||| |||||||||| |||||||| ||| ||||||||| |||||    
T  4445715 tattttcataagctgacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataag 4445782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 587 - 658
Target Start/End: Complemental strand, 4920838 - 4920767
Alignment:
Q  587 taaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 658  Q
    |||| ||||| ||||| |||||||||   ||||||||||||||||| |||||||| |  |||||||||||||    
T  4920838 taaactatttccataacctatcttgagtagcttatgaaaataagctaaaaacaacctaagaacatgtcataa 4920767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 586 - 653
Target Start/End: Original strand, 6279400 - 6279467
Alignment:
Q  586 ttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgt 653  Q
    ||||| ||||||||||||||||| |  || ||||||| ||||| |||||||||||||| || ||||||    
T  6279400 ttaaactattttcataagctatcctagagagcttatggaaatacgctgaaaacaacttatggacatgt 6279467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 592 - 663
Target Start/End: Original strand, 10280656 - 10280727
Alignment:
Q  592 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||| ||||||||||| |||  |||||||||||||||||| || | ||| ||||||||  |||||||||    
T  10280656 tattttcgtaagctatcttcaagaacttatgaaaataagctgacaaaagcttatgaacatgaaataagttgt 10280727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 617 - 664
Target Start/End: Original strand, 10809377 - 10809424
Alignment:
Q  617 cttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgtc 664  Q
    |||||||||||||||||||||||  || | ||||||||||||||||||    
T  10809377 cttatgaaaataagctgaaaacatattataaacatgtcataagttgtc 10809424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 595 - 642
Target Start/End: Complemental strand, 35590952 - 35590905
Alignment:
Q  595 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaact 642  Q
    |||||||||||||| || || ||||||| |||||||||||||||||||    
T  35590952 tttcataagctatcatggagagcttatggaaataagctgaaaacaact 35590905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 594 - 664
Target Start/End: Complemental strand, 1565596 - 1565526
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgtc 664  Q
    ||||| ||| |||| ||| || ||| |||||||||||||||||||| ||| || |||||||||||| ||||    
T  1565596 ttttcttaatctattttggagagctcatgaaaataagctgaaaacagcttatgcacatgtcataagctgtc 1565526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 601 - 643
Target Start/End: Original strand, 11129324 - 11129366
Alignment:
Q  601 aagctatcttgaagtgcttatgaaaataagctgaaaacaactt 643  Q
    |||||||| |||| ||||||||||||||| |||||||||||||    
T  11129324 aagctatcctgaaatgcttatgaaaataaactgaaaacaactt 11129366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 594 - 652
Target Start/End: Complemental strand, 12564935 - 12564877
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatg 652  Q
    |||||||||||||||||  |||||||| | |||||||||||||||| ||| || |||||    
T  12564935 ttttcataagctatcttttagtgcttacggaaataagctgaaaacagcttatggacatg 12564877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 621 - 663
Target Start/End: Original strand, 29635383 - 29635425
Alignment:
Q  621 tgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||||||||||||||||| | |||||||||||| ||||    
T  29635383 tgaaaataagctgaaaacaacttataaacatgtcataacttgt 29635425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 593 - 659
Target Start/End: Original strand, 43338124 - 43338190
Alignment:
Q  593 attttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||||||||||||| | || || ||||||||||||| |||||||| |  || |||||||||||||||    
T  43338124 attttcataagctaacatggagagcttatgaaaataggctgaaaatagattatgaacatgtcataag 43338190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 599 - 661
Target Start/End: Complemental strand, 43722384 - 43722322
Alignment:
Q  599 ataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 661  Q
    ||||||||| ||  || |||||| ||||||||||||||||||| |  ||||||||||||||||    
T  43722384 ataagctatatttgagagcttataaaaataagctgaaaacaacataagaacatgtcataagtt 43722322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 594 - 648
Target Start/End: Original strand, 45975699 - 45975753
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaa 648  Q
    |||||||||||||||||| ||   |||||||||||||||||||||| ||| ||||    
T  45975699 ttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaa 45975753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 599 - 637
Target Start/End: Original strand, 51190862 - 51190900
Alignment:
Q  599 ataagctatcttgaagtgcttatgaaaataagctgaaaa 637  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  51190862 ataagctatcttgaagaacttatgaaaataagctgaaaa 51190900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 594 - 663
Target Start/End: Complemental strand, 51695556 - 51695486
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataagttgt 663  Q
    |||||||||||||||||| ||   |||||||||||||||||||| | ||| ||||| |||| |||||||||    
T  51695556 ttttcataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaacaatgtgataagttgt 51695486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 663
Target Start/End: Original strand, 3924633 - 3924702
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||| |||||||||| ||||| | ||||| |||||||| ||||||||||| | ||||| |||||| ||||    
T  3924633 tttttataagctatcctgaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgt 3924702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 659
Target Start/End: Complemental strand, 4202212 - 4202147
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||||| ||||||||| | || ||||| |||||||||||||||| | ||| || ||||||||||||    
T  4202212 ttttcaaaagctatctggcagagcttacgaaaataagctgaaaatagcttatggacatgtcataag 4202147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 643
Target Start/End: Original strand, 4548730 - 4548779
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 643  Q
    |||||||||||||||||| || ||||  ||||||||||| ||||||||||    
T  4548730 ttttcataagctatcttggagagcttcagaaaataagctaaaaacaactt 4548779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 625 - 658
Target Start/End: Original strand, 4549888 - 4549921
Alignment:
Q  625 aataagctgaaaacaacttgtgaacatgtcataa 658  Q
    ||||||||||||||||||| ||||||||||||||    
T  4549888 aataagctgaaaacaacttatgaacatgtcataa 4549921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 598 - 659
Target Start/End: Original strand, 4622106 - 4622167
Alignment:
Q  598 cataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||| ||||||||| || |||| |||||||||||| |||||| ||| || ||||||||||||    
T  4622106 catatgctatcttggagagcttgtgaaaataagctaaaaacagcttatggacatgtcataag 4622167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 655
Target Start/End: Complemental strand, 4700127 - 4700066
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtca 655  Q
    |||| |||| ||||| || || |||||||||||||||||||||||||||  | |||||||||    
T  4700127 tttttataaactatcctggagagcttatgaaaataagctgaaaacaactcctaaacatgtca 4700066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 663
Target Start/End: Original strand, 4868409 - 4868478
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||| ||| |||| |||||  ||||||| ||||||| |||||||||||| |  ||||||||||||||||    
T  4868409 ttttcgtaaactattttgaaaagcttatgtaaataagttgaaaacaacttattgacatgtcataagttgt 4868478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 616 - 661
Target Start/End: Original strand, 5276324 - 5276369
Alignment:
Q  616 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 661  Q
    ||||| ||||||||  |||||||||||| |||||||||||||||||    
T  5276324 gcttaagaaaataacttgaaaacaacttatgaacatgtcataagtt 5276369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 659
Target Start/End: Complemental strand, 12477348 - 12477283
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||| |||||||||| || || |  |||| |||||||||||||||||||| || ||||||||||||    
T  12477348 ttttaataagctatcatggagagtgtatggaaataagctgaaaacaacttatggacatgtcataag 12477283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 659
Target Start/End: Complemental strand, 12593514 - 12593449
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||||||||||||||||| || ||||||| ||  || ||||||||||||| || |||||| |||||    
T  12593514 ttttcataagctatcttggagcgcttatggaataaacctgaaaacaacttatgcacatgttataag 12593449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 618 - 663
Target Start/End: Original strand, 15579515 - 15579560
Alignment:
Q  618 ttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||| ||||||||||| |||||||| || ||||||||||||||||    
T  15579515 ttatggaaataagctgagaacaacttatggacatgtcataagttgt 15579560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 597 - 658
Target Start/End: Complemental strand, 16981994 - 16981933
Alignment:
Q  597 tcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 658  Q
    |||||||||||| || || ||||||  ||||||||| |||||||||| || |||||||||||    
T  16981994 tcataagctatcatggagagcttatataaataagctaaaaacaacttatggacatgtcataa 16981933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 659
Target Start/End: Complemental strand, 24460468 - 24460403
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||||| |  || |||||  ||||||||||| ||||| ||| |||||||||||||||    
T  24460468 ttttcataagctatccttgagagcttacaaaaataagctggaaacagcttatgaacatgtcataag 24460403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 599 - 663
Target Start/End: Original strand, 26185524 - 26185589
Alignment:
Q  599 ataagctatcttgaagtgcttatgaaaa-taagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||||||| || ||||| ||||| || | |||||||||||| || ||||||||||||||||    
T  26185524 ataagctatcttggagagcttacgaaaaatatgttgaaaacaacttatgcacatgtcataagttgt 26185589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 659
Target Start/End: Complemental strand, 27963431 - 27963366
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||||  || || ||||||  ||||||||| |||||||||| || ||||||||||||    
T  27963431 ttttcataagctattatggagagcttatataaataagctaaaaacaacttatggacatgtcataag 27963366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 651
Target Start/End: Complemental strand, 28077130 - 28077073
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacat 651  Q
    |||||||||||||| ||  || ||||||  |||||||||||||||||||| |||||||    
T  28077130 ttttcataagctattttagagagcttattgaaataagctgaaaacaacttatgaacat 28077073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 659
Target Start/End: Original strand, 28909999 - 28910064
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||| | |||||   ||||||||||||| |||||||||||| | |||| ||||||||    
T  28909999 ttttcataagctagcatgaagaagttatgaaaataagatgaaaacaacttataaacaagtcataag 28910064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 601 - 658
Target Start/End: Complemental strand, 28935930 - 28935873
Alignment:
Q  601 aagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 658  Q
    |||||||| ||||| ||||||| ||||||||| |||| ||||| || |||||||||||    
T  28935930 aagctatcctgaagagcttatggaaataagctaaaaaaaacttatggacatgtcataa 28935873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 651
Target Start/End: Original strand, 32182280 - 32182337
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacat 651  Q
    |||||| || ||||||||||| ||||| | |||||||||||||| ||||| |||||||    
T  32182280 ttttcaaaatctatcttgaagagcttaaggaaataagctgaaaaaaacttatgaacat 32182337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 624 - 661
Target Start/End: Complemental strand, 34278724 - 34278687
Alignment:
Q  624 aaataagctgaaaacaacttgtgaacatgtcataagtt 661  Q
    |||||||||||||||||| | |||||||||||||||||    
T  34278724 aaataagctgaaaacaacctatgaacatgtcataagtt 34278687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 663
Target Start/End: Complemental strand, 35080130 - 35080061
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||| ||||||| || || |||| |  ||||||||| |||||| ||| |||||||||||||||||||    
T  35080130 ttttcatgagctatcatggagagcttgtcgaaataagctcaaaacagcttatgaacatgtcataagttgt 35080061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 598 - 659
Target Start/End: Original strand, 35925703 - 35925764
Alignment:
Q  598 cataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||| || || | ||||| ||||||| |||||||| ||| |||||||||||||||    
T  35925703 cataagctatcatggagagtttatggaaataagttgaaaacagcttatgaacatgtcataag 35925764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 659
Target Start/End: Complemental strand, 41195254 - 41195189
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||| |||||||| ||  ||||||||||||||||||||| | ||| | || ||||||||||    
T  41195254 ttttcataaactatcttggagaacttatgaaaataagctgaaaaaagcttattaaaatgtcataag 41195189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 663
Target Start/End: Original strand, 45205077 - 45205146
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||||||||| || || | | ||| ||||||||||||||||||||  | |||| |||||||||||    
T  45205077 ttttcataagctatcatgtagagttcatggaaataagctgaaaacaacttagggacatatcataagttgt 45205146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 624 - 661
Target Start/End: Original strand, 47917275 - 47917312
Alignment:
Q  624 aaataagctgaaaacaacttgtgaacatgtcataagtt 661  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  47917275 aaataagttgaaaacaacttatgaacatgtcataagtt 47917312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 8e-20; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 500322 - 500440
Alignment:
Q  209 atcatccttgaaggcaaaaataccctttctttttagatgagcataaagatgatcaacaaaagtgttgcgaacgtcaggacctctaaaacttataaacaca 308  Q
    ||||||||| ||||  |||||||| |||||  | ||||||||||| |||||||||||||||||||||||   ||| | |||||| ||||| |||||||||    
T  500322 atcatccttaaaggtgaaaataccttttctaatgagatgagcatagagatgatcaacaaaagtgttgcgtgtgtcggaacctctgaaactgataaacaca 500421  T
Q  309 tcgtatctacagctttgga 327  Q
    || |||||| |||||||||    
T  500422 tcatatctatagctttgga 500440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 594 - 659
Target Start/End: Complemental strand, 17258944 - 17258879
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||| ||||| ||||| |||||||||||||||||||||||| ||| |||||||||||||||    
T  17258944 ttttcataaactatcctgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcataag 17258879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 594 - 658
Target Start/End: Original strand, 11707064 - 11707128
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 658  Q
    |||||||||||||||||| || |||| ||||||||||||||||||||||| | ||||||||||||    
T  11707064 ttttcataagctatcttgtagagcttttgaaaataagctgaaaacaacttataaacatgtcataa 11707128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 574 - 661
Target Start/End: Complemental strand, 12242791 - 12242704
Alignment:
Q  574 gataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 661  Q
    ||||||||| ||| ||||| |||||||||||||||||| || ||||||| || ||||||||||||||||  ||  |||||||||||||    
T  12242791 gataaaatagagtcaaattgttttcataagctatcttggagagcttatggaagtaagctgaaaacaactaatgttcatgtcataagtt 12242704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 588 - 663
Target Start/End: Complemental strand, 37611282 - 37611207
Alignment:
Q  588 aaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||| |||||||||||||||||| || ||||||| |||||| ||||||||| ||| ||||||||||| |||||||    
T  37611282 aaattgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgt 37611207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 588 - 663
Target Start/End: Complemental strand, 37788012 - 37787937
Alignment:
Q  588 aaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||| |||||||||||||||||| || ||||||| |||||| ||||||||| ||| ||||||||||| |||||||    
T  37788012 aaattgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgt 37787937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 586 - 663
Target Start/End: Complemental strand, 10125787 - 10125710
Alignment:
Q  586 ttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||| ||||||||||||| || | || || |||||||||||||||||||||||| ||| | |||||||||||||||||    
T  10125787 ttaagttattttcataagttaccatggagagcttatgaaaataagctgaaaacaccttatcaacatgtcataagttgt 10125710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 594 - 659
Target Start/End: Complemental strand, 13604910 - 13604845
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||||||||| |||||||||| ||||||||||||||| |||||||||| | || ||||||||||||    
T  13604910 ttttcataagttatcttgaagagcttatgaaaataagttgaaaacaacgtatggacatgtcataag 13604845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 594 - 659
Target Start/End: Original strand, 36639531 - 36639596
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||||||||||| |||||||||||||||  ||||||||||| || ||| ||||||||    
T  36639531 ttttcataagctatcttgaagagcttatgaaaataagaggaaaacaacttatggacacgtcataag 36639596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 596 - 663
Target Start/End: Complemental strand, 12460060 - 12459993
Alignment:
Q  596 ttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||| ||||||||||| || ||||||||||||||||  |||||||| | |||||||||||||||||||    
T  12460060 ttcacaagctatcttgcagagcttatgaaaataagccaaaaacaacatatgaacatgtcataagttgt 12459993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 663
Target Start/End: Original strand, 7674657 - 7674726
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||||||||| ||   || ||||||||||||||||||| ||| | |||||||||||||||||    
T  7674657 ttttcataagctatcttggagaatttgtgaaaataagctgaaaacaccttataaacatgtcataagttgt 7674726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 663
Target Start/End: Complemental strand, 10272492 - 10272423
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||||| |||||| || | ||||||||||||||||||||||||||    ||||||||||||||||    
T  10272492 ttttcataagccatcttggagagtttatgaaaataagctgaaaacaacttacagacatgtcataagttgt 10272423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 663
Target Start/End: Original strand, 17368685 - 17368754
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||||||||| || | ||||| |||||||||||||||  | | |||||||||||||||||||    
T  17368685 ttttcataagctatcttggagaggttatggaaataagctgaaaactgcatatgaacatgtcataagttgt 17368754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 594 - 650
Target Start/End: Complemental strand, 4014485 - 4014429
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaaca 650  Q
    |||||||||||||||||| ||  ||||||||||||||||||||||| ||| ||||||    
T  4014485 ttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttatgaaca 4014429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 599 - 659
Target Start/End: Original strand, 12521542 - 12521602
Alignment:
Q  599 ataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||| |||||| ||||||| |||||||||||||||| ||| ||||||| |||||||    
T  12521542 ataagctattttgaagagcttatggaaataagctgaaaacagcttatgaacatatcataag 12521602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 587 - 659
Target Start/End: Complemental strand, 32408660 - 32408588
Alignment:
Q  587 taaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||| ||||||||||||||||| ||||| ||||||| |||||||| |||| ||||||  | ||||||||||||    
T  32408660 taaactattttcataagctatcctgaagagcttatggaaataagcagaaaccaacttacggacatgtcataag 32408588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 594 - 658
Target Start/End: Complemental strand, 33533600 - 33533536
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 658  Q
    |||||| ||||||||||| || ||||||| ||||||| |||||||||||| |||| |||||||||    
T  33533600 ttttcacaagctatcttggagagcttatggaaataagttgaaaacaacttatgaatatgtcataa 33533536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 616 - 663
Target Start/End: Original strand, 12467164 - 12467211
Alignment:
Q  616 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||||||||||||||| ||| | |||||||||||||||||    
T  12467164 gcttatgaaaataagctgaaaacagcttataaacatgtcataagttgt 12467211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 594 - 661
Target Start/End: Complemental strand, 25461377 - 25461310
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 661  Q
    ||||||||| ||||||||  ||  |||||||||||||||||||||| ||  |||||||||||||||||    
T  25461377 ttttcataacctatcttggcgtatttatgaaaataagctgaaaacagctaatgaacatgtcataagtt 25461310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 574 - 661
Target Start/End: Original strand, 985600 - 985689
Alignment:
Q  574 gataaaataaagttaaattattttca--taagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 661  Q
    ||||||||||||| ||| | ||||||  ||||||||| ||||| |  |||| |||||||||||||||  |||||| ||||||||||||||    
T  985600 gataaaataaagtcaaactgttttcacataagctatcatgaagagactatggaaataagctgaaaaccgcttgtggacatgtcataagtt 985689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 659
Target Start/End: Complemental strand, 9202809 - 9202743
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataag 659  Q
    |||||||||| ||||||||||  ||||||||||||||||| ||||| ||| ||||| ||||||||||    
T  9202809 ttttcataagttatcttgaagaacttatgaaaataagctggaaacagcttatgaacaatgtcataag 9202743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 618 - 659
Target Start/End: Complemental strand, 499768 - 499727
Alignment:
Q  618 ttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||| |||||||||||||||||||||| |||||||||||||    
T  499768 ttatggaaataagctgaaaacaacttgttaacatgtcataag 499727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 663
Target Start/End: Complemental strand, 2092606 - 2092537
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||| | ||||||||||| | ||||||||| ||| |||||||||||| || ||||| ||||||||||    
T  2092606 ttttcattaactatcttgaagggtttatgaaaaaaagttgaaaacaacttatggacatgccataagttgt 2092537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 659
Target Start/End: Original strand, 2568667 - 2568732
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||||| || || ||| ||||||||||||| |||| ||||| |||| ||||||||||    
T  2568667 ttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatgaatatgtcataag 2568732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 643
Target Start/End: Complemental strand, 7319069 - 7319020
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 643  Q
    |||||||||||||||||| ||  |||||||||||||||||| ||||||||    
T  7319069 ttttcataagctatcttggagaacttatgaaaataagctgagaacaactt 7319020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 606 - 663
Target Start/End: Original strand, 8089957 - 8090014
Alignment:
Q  606 atcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||| |||||||||||||||||||||||| |||  ||| || |||||||||||    
T  8089957 atcttgaagagcttatgaaaataagctgaaaacagcttaggaatatatcataagttgt 8090014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 659
Target Start/End: Complemental strand, 18543257 - 18543193
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||||| || || |||||||||| ||||||||||||||||  || ||||||||||||    
T  18543257 ttttcataagctatcctggagagcttatgaaa-taagctgaaaacaactcatggacatgtcataag 18543193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 643
Target Start/End: Original strand, 18906351 - 18906400
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 643  Q
    ||||||||||||||||||||  ||||||  ||||||||||||||||||||    
T  18906351 ttttcataagctatcttgaaaagcttatcgaaataagctgaaaacaactt 18906400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 659
Target Start/End: Complemental strand, 21768258 - 21768193
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||||||||| |||||||||| ||||| ||||||||| |||||||| | | || ||||||||||||    
T  21768258 ttttcataagttatcttgaagagcttacgaaaataagttgaaaacagcgtatggacatgtcataag 21768193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 659
Target Start/End: Complemental strand, 26209474 - 26209409
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||||| ||||||| |||||  ||||| ||||||||| |||||| ||||| ||||||    
T  26209474 ttttcataagctatcatgaagtgtttatgcgaataatctgaaaacagcttgtggacatgccataag 26209409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 659
Target Start/End: Complemental strand, 41957512 - 41957447
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||||| |  ||  |||||||||||||| |||||||||||| || ||||||||||||    
T  41957512 ttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatggacatgtcataag 41957447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 594 - 658
Target Start/End: Complemental strand, 5284509 - 5284445
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 658  Q
    |||||||| |||||| ||||| ||| |||||||||||||||||| | ||| || |||||||||||    
T  5284509 ttttcataggctatcatgaagagctaatgaaaataagctgaaaaaagcttatggacatgtcataa 5284445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 594 - 650
Target Start/End: Original strand, 7984978 - 7985034
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaaca 650  Q
    |||||||||||||||||| ||   |||||||||||||||||||||| ||| ||||||    
T  7984978 ttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaaca 7985034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 595 - 643
Target Start/End: Complemental strand, 38104917 - 38104869
Alignment:
Q  595 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 643  Q
    ||||||||||||||||  || ||||||| ||||||||||||||||||||    
T  38104917 tttcataagctatcttagagagcttatggaaataagctgaaaacaactt 38104869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 596 - 644
Target Start/End: Complemental strand, 38829695 - 38829647
Alignment:
Q  596 ttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttg 644  Q
    ||||||||||||||||||| ||||||||||||| || ||||||| ||||    
T  38829695 ttcataagctatcttgaagagcttatgaaaatatgccgaaaacagcttg 38829647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 594 - 648
Target Start/End: Original strand, 3237102 - 3237156
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaa 648  Q
    ||||||||||||||| | ||| ||||||||||||| |||||| ||||||| ||||    
T  3237102 ttttcataagctatcctaaagagcttatgaaaatatgctgaacacaacttatgaa 3237156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 594 - 648
Target Start/End: Original strand, 7907890 - 7907944
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaa 648  Q
    |||| ||||||| ||||| || |||||||||| ||||||||||||||||| ||||    
T  7907890 ttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 7907944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 659
Target Start/End: Original strand, 32545046 - 32545108
Alignment:
Q  597 tcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||||| || |||||||||||||| ||||||| |  ||||  ||||||||||||    
T  32545046 tcataagctatcttggagagcttatgaaaataatctgaaaatagattgtagacatgtcataag 32545108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 594 - 659
Target Start/End: Original strand, 39105473 - 39105539
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataag 659  Q
    |||||||||||||||||| ||  |||||||||||||||| |||| | ||| ||||| ||||||||||    
T  39105473 ttttcataagctatcttggagaacttatgaaaataagctaaaaatagcttatgaacaatgtcataag 39105539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 618 - 659
Target Start/End: Original strand, 1899187 - 1899228
Alignment:
Q  618 ttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||| |||||||||||||||||||| || ||||||||||||    
T  1899187 ttatggaaataagctgaaaacaacttatgcacatgtcataag 1899228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 618 - 663
Target Start/End: Complemental strand, 11700415 - 11700370
Alignment:
Q  618 ttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||| ||||||||| ||| || ||||||||||||||||    
T  11700415 ttatgaaaataatctgaaaacagcttatggacatgtcataagttgt 11700370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 643
Target Start/End: Original strand, 12425580 - 12425629
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 643  Q
    |||||| ||||||||||| ||  |||||||||||||| ||||||||||||    
T  12425580 ttttcacaagctatcttggagaacttatgaaaataagttgaaaacaactt 12425629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 663
Target Start/End: Original strand, 32172662 - 32172731
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||||||||| |||||  || ||| ||||||||||||||   ||| || ||||||||||||||||    
T  32172662 ttttcataagctatcatgaagaactaatggaaataagctgaaaatggcttatggacatgtcataagttgt 32172731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 600 - 661
Target Start/End: Complemental strand, 32194134 - 32194073
Alignment:
Q  600 taagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 661  Q
    |||||||||||  || ||||||  |||||||||||||||||||| || | ||||||||||||    
T  32194134 taagctatctttgagagcttatataaataagctgaaaacaacttatggaaatgtcataagtt 32194073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 663
Target Start/End: Original strand, 32897466 - 32897535
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||| |||||||  ||| |||||||||||||||| |||||||  || |||| || |||||||||||    
T  32897466 ttttcatacgctatctcaaagagcttatgaaaataagcagaaaacaggttatgaaaatatcataagttgt 32897535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 616 - 657
Target Start/End: Original strand, 35963272 - 35963313
Alignment:
Q  616 gcttatgaaaataagctgaaaacaacttgtgaacatgtcata 657  Q
    ||||||| |||||||||||||||||||| || ||||||||||    
T  35963272 gcttatggaaataagctgaaaacaacttatggacatgtcata 35963313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 574 - 659
Target Start/End: Complemental strand, 36774788 - 36774703
Alignment:
Q  574 gataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||| ||||| ||| | |||| |||||||||| || || ||||||| ||||||||||||| || |||  | ||||||||||||    
T  36774788 gataaaacaaagtcaaactgtttttataagctatcctggagagcttatggaaataagctgaaaccatctttaggacatgtcataag 36774703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 643
Target Start/End: Original strand, 39594816 - 39594865
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 643  Q
    |||||||||| |||||||  |  |||||||||||||||||||||||||||    
T  39594816 ttttcataagatatcttgttgaacttatgaaaataagctgaaaacaactt 39594865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 3e-19; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 574 - 659
Target Start/End: Original strand, 20672739 - 20672824
Alignment:
Q  574 gataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||| ||| | |||| |||||||||| || || |||||||||||||||||||||||| ||| |||||||||||||||    
T  20672739 gataaaataaagtcaaactgtttttataagctatcctggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataag 20672824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 574 - 662
Target Start/End: Original strand, 33553229 - 33553317
Alignment:
Q  574 gataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttg 662  Q
    ||||||||||||| ||||| ||||||||||||||||||||| ||||||| ||||||||||  |||| |||  | |||||||||||||||    
T  33553229 gataaaataaagtcaaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcataagttg 33553317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 592 - 653
Target Start/End: Complemental strand, 42215145 - 42215084
Alignment:
Q  592 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgt 653  Q
    |||||||||||||||||||| || ||||||| |||||||||||||||||||| |||||||||    
T  42215145 tattttcataagctatcttggagagcttatgtaaataagctgaaaacaacttatgaacatgt 42215084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 592 - 663
Target Start/End: Complemental strand, 30191204 - 30191133
Alignment:
Q  592 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||| |||||||||| |||| || ||||| ||||||||||||||||| || |||||||||||||||||||    
T  30191204 tattttgataagctatcctgaaatgtttatggaaataagctgaaaacaagttttgaacatgtcataagttgt 30191133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 587 - 636
Target Start/End: Original strand, 11494148 - 11494197
Alignment:
Q  587 taaattattttcataagctatcttgaagtgcttatgaaaataagctgaaa 636  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  11494148 taaactattttcataagctatcttgaagagcttatgaaaataagctgaaa 11494197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 616 - 663
Target Start/End: Complemental strand, 13000463 - 13000416
Alignment:
Q  616 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  13000463 gcttatggaaataagctgaaaacaacttgtggacatgtcataagttgt 13000416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 595 - 662
Target Start/End: Original strand, 21653091 - 21653158
Alignment:
Q  595 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttg 662  Q
    |||||| |||||||||| || |||||||||||||||||||||| | ||| ||||| ||||||||||||    
T  21653091 tttcattagctatcttggagagcttatgaaaataagctgaaaatagcttatgaacgtgtcataagttg 21653158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 617 - 663
Target Start/End: Complemental strand, 2595035 - 2594989
Alignment:
Q  617 cttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  2595035 cttatgagaataagctgaaaacaacttatgaacatgtcataagttgt 2594989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 640
Target Start/End: Original strand, 4762518 - 4762564
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaa 640  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||    
T  4762518 ttttcataagctatcttgaagagcttatgtaaataagctgaaaacaa 4762564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 592 - 653
Target Start/End: Original strand, 11493972 - 11494033
Alignment:
Q  592 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgt 653  Q
    |||||||||| |||||||||||| |||||||||| ||||||||| ||| ||| |||||||||    
T  11493972 tattttcatacgctatcttgaagagcttatgaaagtaagctgaacacagcttatgaacatgt 11494033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 659
Target Start/End: Complemental strand, 11569518 - 11569453
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||||| || || | || ||||||||||||||||||||||| || ||||||||||||    
T  11569518 ttttcataagctatcatggagagattttgaaaataagctgaaaacaacttatgtacatgtcataag 11569453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 593 - 661
Target Start/End: Complemental strand, 25869328 - 25869260
Alignment:
Q  593 attttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 661  Q
    ||||||||| |||||| || || | ||||| |||||||||||||||||||| || ||||||||||||||    
T  25869328 attttcataggctatcatggagagtttatggaaataagctgaaaacaacttatggacatgtcataagtt 25869260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 599 - 663
Target Start/End: Complemental strand, 39866790 - 39866726
Alignment:
Q  599 ataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||||||| |||||||||||||| ||||||||| ||| || |||||  |||||||||    
T  39866790 ataagctatcttgaagagcttatgaaaataaactgaaaacagcttatggacatgctataagttgt 39866726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 574 - 661
Target Start/End: Original strand, 14949855 - 14949942
Alignment:
Q  574 gataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 661  Q
    ||||||||| ||| ||| | ||||||||||||||| | ||| | ||||  |||||||||||||||| ||| || ||||||||||||||    
T  14949855 gataaaatagagtcaaactcttttcataagctatcctaaagagattatagaaataagctgaaaacagcttatggacatgtcataagtt 14949942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 594 - 637
Target Start/End: Original strand, 27028840 - 27028883
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaa 637  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  27028840 ttttcataagctatcttggagagcttatgaaaataagctgaaaa 27028883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 617 - 656
Target Start/End: Original strand, 30389131 - 30389170
Alignment:
Q  617 cttatgaaaataagctgaaaacaacttgtgaacatgtcat 656  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  30389131 cttatgaaaataagctgaaaacaacttatgaacatgtcat 30389170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 592 - 655
Target Start/End: Complemental strand, 33714299 - 33714236
Alignment:
Q  592 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtca 655  Q
    |||||||||||||||||| | || |||||| ||||||||||||||||| ||| |||||| ||||    
T  33714299 tattttcataagctatctgggagagcttataaaaataagctgaaaacagcttatgaacaagtca 33714236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 594 - 661
Target Start/End: Original strand, 38421273 - 38421340
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 661  Q
    |||||| ||||||||||||||  ||| || || ||||||||||||||||| || ||||||||||||||    
T  38421273 ttttcaaaagctatcttgaagatcttgtgtaagtaagctgaaaacaacttatggacatgtcataagtt 38421340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 574 - 629
Target Start/End: Complemental strand, 40280308 - 40280253
Alignment:
Q  574 gataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataa 629  Q
    ||||||||||||| ||||| |||||||||||||||| |||| ||||||| ||||||    
T  40280308 gataaaataaagtaaaattgttttcataagctatctagaagagcttatggaaataa 40280253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 616 - 659
Target Start/End: Complemental strand, 41606942 - 41606899
Alignment:
Q  616 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||| |||||||||||||||||||| |||||||||||||||    
T  41606942 gcttatggaaataagctgaaaacaacttttgaacatgtcataag 41606899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 592 - 659
Target Start/End: Complemental strand, 42215369 - 42215302
Alignment:
Q  592 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||||||||| |||||| || || ||||||| |||||||||||||||| ||| |||||| ||||||||    
T  42215369 tattttcatatgctatcctggagagcttatgtaaataagctgaaaacagcttatgaacaagtcataag 42215302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 612 - 658
Target Start/End: Complemental strand, 3600781 - 3600735
Alignment:
Q  612 aagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 658  Q
    ||||||||||||||||||| |||||||||||| || |||||||||||    
T  3600781 aagtgcttatgaaaataagttgaaaacaacttatggacatgtcataa 3600735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 612 - 658
Target Start/End: Complemental strand, 14339648 - 14339602
Alignment:
Q  612 aagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 658  Q
    ||||||||||||||||||| |||||||||||| || |||||||||||    
T  14339648 aagtgcttatgaaaataagttgaaaacaacttatggacatgtcataa 14339602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 663
Target Start/End: Complemental strand, 779122 - 779053
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||| |||||||| || |  ||  |||||||| |||||||||||| |||||||||||||||||||    
T  779122 ttttcataaactatcttggagagtgtaccaaaataagatgaaaacaacttatgaacatgtcataagttgt 779053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 618 - 663
Target Start/End: Original strand, 4281579 - 4281624
Alignment:
Q  618 ttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||||||| |||||||||||| ||||||||||||| |||||    
T  4281579 ttatgaaaataagatgaaaacaacttatgaacatgtcatatgttgt 4281624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 663
Target Start/End: Original strand, 30918122 - 30918190
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||| | ||||| || ||||||| |||||||||||||||||||| |||| |||||| |||||||    
T  30918122 ttttcataagttttcttggagagcttatggaaataagctgaaaacaacttatgaa-atgtcacaagttgt 30918190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 619 - 663
Target Start/End: Complemental strand, 32841022 - 32840977
Alignment:
Q  619 tatgaaaataagctgaaaacaacttgtgaac-atgtcataagttgt 663  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||    
T  32841022 tatgaaaataagctgaaaacaacttatgaacaatgtcataagttgt 32840977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 663
Target Start/End: Complemental strand, 41620352 - 41620283
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||| |||||||||||||  | |||| ||||||||||| ||||||||||| || ||||||||||| ||||    
T  41620352 tttttataagctatcttgtcgagcttttgaaaataagcggaaaacaacttatggacatgtcataatttgt 41620283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 643
Target Start/End: Complemental strand, 44236884 - 44236835
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 643  Q
    |||||||||||||| ||| || |||||||||||||||||||||| |||||    
T  44236884 ttttcataagctatattggagagcttatgaaaataagctgaaaataactt 44236835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 594 - 658
Target Start/End: Complemental strand, 2235717 - 2235653
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 658  Q
    |||||||||| |||||| ||| ||||||| |||| |||| ||||| |||| ||||||||||||||    
T  2235717 ttttcataaggtatcttaaagagcttatggaaatgagctaaaaacgacttatgaacatgtcataa 2235653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 594 - 650
Target Start/End: Complemental strand, 9956875 - 9956819
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaaca 650  Q
    ||||||||| |||||||| ||  |||||||||||||||||||||| |||| ||||||    
T  9956875 ttttcataatctatcttggagaacttatgaaaataagctgaaaactacttatgaaca 9956819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 595 - 663
Target Start/End: Complemental strand, 12224959 - 12224891
Alignment:
Q  595 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||| ||| ||||| ||| || ||||||||||||||| ||||  || ||||||||||||||||    
T  12224959 tttcataagccatcctgaagagctcataaaaataagctgaaaaaaactgatggacatgtcataagttgt 12224891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 594 - 658
Target Start/End: Original strand, 27754413 - 27754477
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 658  Q
    |||||||||||||| ||| || ||||||||||||||||||||  |||||| | | ||||||||||    
T  27754413 ttttcataagctattttggagagcttatgaaaataagctgaacgcaacttataatcatgtcataa 27754477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 592 - 659
Target Start/End: Complemental strand, 9541059 - 9540992
Alignment:
Q  592 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||||||| |  || |||| ||||||||||||||| |||| || || ||||||||||||    
T  9541059 tattttcataagctatcctagagagcttttgaaaataagctgaacacaaattatggacatgtcataag 9540992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 592 - 655
Target Start/End: Complemental strand, 10075614 - 10075551
Alignment:
Q  592 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtca 655  Q
    ||||||||||||||||| |  || ||||||||||||||||| ||| || ||||| |||||||||    
T  10075614 tattttcataagctatcctagagagcttatgaaaataagctaaaagcagcttgtcaacatgtca 10075551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 588 - 659
Target Start/End: Original strand, 12851179 - 12851250
Alignment:
Q  588 aaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||| |||||||||||| || |  || |||||||||||||||| ||||||| ||| ||||||||| |||||    
T  12851179 aaattgttttcataagctttccttgagagcttatgaaaataagccgaaaacatcttatgaacatgttataag 12851250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 657
Target Start/End: Complemental strand, 28769400 - 28769337
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcata 657  Q
    |||||||||||||| ||| || | ||||| |||||||||||||||||||| || |||| |||||    
T  28769400 ttttcataagctattttggagagtttatggaaataagctgaaaacaacttatggacatatcata 28769337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 592 - 658
Target Start/End: Complemental strand, 28784858 - 28784793
Alignment:
Q  592 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 658  Q
    |||||||||||||||||||  || |||| | ||||||||||||||| | ||| ||||||||||||||    
T  28784858 tattttcataagctatcttagagagcttgtaaaaataagctgaaaa-agcttatgaacatgtcataa 28784793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 594 - 656
Target Start/End: Complemental strand, 29059857 - 29059795
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcat 656  Q
    |||||||||||||||||||| | || || || |||| ||||||||||| | ||||||||||||    
T  29059857 ttttcataagctatcttgaaatactcattaacataatctgaaaacaacatatgaacatgtcat 29059795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 658
Target Start/End: Original strand, 1930044 - 1930109
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataa 658  Q
    ||||||||||||||||||  |  ||| ||||||||||||||||||| ||| ||||| |||||||||    
T  1930044 ttttcataagctatcttggtgaccttgtgaaaataagctgaaaacagcttatgaacaatgtcataa 1930109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 616 - 661
Target Start/End: Complemental strand, 3161662 - 3161617
Alignment:
Q  616 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 661  Q
    |||||| |||||||||||||||||  || |||||||||||||||||    
T  3161662 gcttataaaaataagctgaaaacattttatgaacatgtcataagtt 3161617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 659
Target Start/End: Original strand, 5069706 - 5069771
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||||||||| ||||||  |  ||||||||||||||||||||||  |||| ||||||||| |||||    
T  5069706 ttttcataagatatcttcgaaagcttatgaaaataagctgaaaatgacttatgaacatgttataag 5069771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 663
Target Start/End: Complemental strand, 7918507 - 7918438
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||| |||||||||||| || ||||||  ||||||| || ||||| ||| |||||||||| ||||||||    
T  7918507 ttttcgtaagctatcttggagagcttattgaaataagttggaaacagcttatgaacatgtcttaagttgt 7918438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 639
Target Start/End: Complemental strand, 7918834 - 7918789
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 639  Q
    |||||||||||||||||| || |||| || ||||||||||||||||    
T  7918834 ttttcataagctatcttgtagagcttgtggaaataagctgaaaaca 7918789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 659
Target Start/End: Complemental strand, 37353310 - 37353245
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||| |||||||||||  || |||||||||||||| |||||||||  || |||| ||||||||||    
T  37353310 ttttcttaagctatctttgagagcttatgaaaataatctgaaaacagtttatgaatatgtcataag 37353245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 663
Target Start/End: Complemental strand, 39551270 - 39551201
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||| || || || |||||| |||||||| | |||||| ||| || ||||||||||||||||    
T  39551270 ttttcataagctttcctggagagcttataaaaataagttaaaaacagcttttggacatgtcataagttgt 39551201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 663
Target Start/End: Original strand, 43504760 - 43504829
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||| ||||||||||||| ||  |||||| |||||||||||||||| ||| | |||| ||| ||||||||    
T  43504760 tttttataagctatcttggagaacttatggaaataagctgaaaacagcttataaacaagtcgtaagttgt 43504829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 3e-19; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 594 - 659
Target Start/End: Original strand, 33887839 - 33887904
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||||| |||| |||||||| ||||||| ||||||||||||||||||||||||||||    
T  33887839 ttttcataagctatcctgaaatgcttatggaaataagttgaaaacaacttgtgaacatgtcataag 33887904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 591 - 663
Target Start/End: Original strand, 4420649 - 4420721
Alignment:
Q  591 ttattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||| |||||||||||| || ||||||| |||||||||||||||| ||| |||||||||||||| ||||    
T  4420649 ttattttcctaagctatcttggagagcttatggaaataagctgaaaacagcttatgaacatgtcataatttgt 4420721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 594 - 659
Target Start/End: Original strand, 6647396 - 6647461
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||||||||||||||||  || ||||||||||||||| |||||||| ||| |||||||||||||||    
T  6647396 ttttcataagctatcttagagagcttatgaaaataagttgaaaacatcttatgaacatgtcataag 6647461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 610 - 661
Target Start/End: Original strand, 6536972 - 6537023
Alignment:
Q  610 tgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 661  Q
    ||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  6536972 tgaagagcttatggaaataagctgaaaacaacttatgaacatgtcataagtt 6537023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 611 - 661
Target Start/End: Original strand, 9027604 - 9027654
Alignment:
Q  611 gaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 661  Q
    |||| |||||||||||||||||||||||||||| || ||||||||||||||    
T  9027604 gaagagcttatgaaaataagctgaaaacaacttatggacatgtcataagtt 9027654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 601 - 659
Target Start/End: Original strand, 13908479 - 13908537
Alignment:
Q  601 aagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||||||| ||||| |||||||||||||||||||||||| |||  ||||||||||||||    
T  13908479 aagctatcatgaagagcttatgaaaataagctgaaaacagcttacgaacatgtcataag 13908537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 574 - 656
Target Start/End: Original strand, 31583668 - 31583750
Alignment:
Q  574 gataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcat 656  Q
    |||||||| |||| ||||| |||||||||||||||  |||  ||||||| ||||||| |||||||||||| || |||||||||    
T  31583668 gataaaatgaagtcaaattgttttcataagctatcccgaaaagcttatggaaataagttgaaaacaacttatggacatgtcat 31583750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 663
Target Start/End: Original strand, 2112209 - 2112278
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||| |||||||  |||||||||  |||||| | ||||||||||| |||||||||||||||||||    
T  2112209 ttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaacatgtcataagttgt 2112278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 574 - 635
Target Start/End: Complemental strand, 2205671 - 2205610
Alignment:
Q  574 gataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaa 635  Q
    ||||||| ||||| ||||| |||||||||||||||||| || ||||||| ||||||||||||    
T  2205671 gataaaacaaagtcaaattgttttcataagctatcttggagagcttatggaaataagctgaa 2205610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 663
Target Start/End: Original strand, 3528812 - 3528881
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||| | |||||||| || ||||||||||||||| ||||||||| || || ||||||||||||||||    
T  3528812 ttttcatgaactatcttggagagcttatgaaaataagatgaaaacaagttatggacatgtcataagttgt 3528881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 663
Target Start/End: Original strand, 30863255 - 30863324
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||| |||| ||||||| ||||||  || ||||||||||||||||| || ||||||||||||||||    
T  30863255 ttttcataggctagcttgaagagcttatagaagtaagctgaaaacaacttatgtacatgtcataagttgt 30863324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 587 - 638
Target Start/End: Original strand, 26694880 - 26694931
Alignment:
Q  587 taaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaac 638  Q
    |||||| ||||||||| |||||||||||  ||||||||||||||||||||||    
T  26694880 taaattgttttcataaactatcttgaagaacttatgaaaataagctgaaaac 26694931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 639
Target Start/End: Complemental strand, 835310 - 835265
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 639  Q
    |||||||||||||||||| ||  |||||||||||||||||||||||    
T  835310 ttttcataagctatcttggagaacttatgaaaataagctgaaaaca 835265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 659
Target Start/End: Complemental strand, 5564189 - 5564124
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||||||||||| |||||||| | ||||| |||||||||||||||| |||  | ||||||||||||    
T  5564189 ttttcataagctgtcttgaagagtttatgcaaataagctgaaaacagctttcggacatgtcataag 5564124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 663
Target Start/End: Complemental strand, 7931787 - 7931718
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||| |||||||| |  || ||||| | ||||||||||||||||||||  ||||||||||||||||||    
T  7931787 ttttcaaaagctatcctacagagcttacggaaataagctgaaaacaacttaagaacatgtcataagttgt 7931718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 663
Target Start/End: Complemental strand, 10616602 - 10616533
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||| ||||||||| ||| || |||||| ||||||||||||| |||||||  | ||||||||||||||||    
T  10616602 ttttaataagctattttggagagcttataaaaataagctgaacacaacttacggacatgtcataagttgt 10616533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 663
Target Start/End: Complemental strand, 20368241 - 20368172
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||| ||||| ||  |||||||||||||| |||||  | ||| |||||||||||||||||||    
T  20368241 ttttcataagctttcttggagaacttatgaaaataagttgaaactagcttatgaacatgtcataagttgt 20368172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 639
Target Start/End: Original strand, 27894055 - 27894100
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 639  Q
    |||||||||| |||||||||  ||||||||||||||||||||||||    
T  27894055 ttttcataagatatcttgaaaagcttatgaaaataagctgaaaaca 27894100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 659
Target Start/End: Original strand, 31624099 - 31624164
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||||||| ||||||||| ||   ||||||||||||| |||||||| ||| |||||||||||||||    
T  31624099 ttttcataggctatcttggagaaattatgaaaataagttgaaaacagcttatgaacatgtcataag 31624164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 659
Target Start/End: Complemental strand, 32386624 - 32386559
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||| || |||| || || ||||||||||||||||||||||||| ||||| |||||| |||||    
T  32386624 ttttcattagttatcctggagagcttatgaaaataagctgaaaacaagttgtggacatgttataag 32386559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 663
Target Start/End: Original strand, 34403864 - 34403933
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||| |  | ||| ||||||| ||||||| |||||||| ||| |||||||||||||||||||    
T  34403864 ttttcataagctgtactaaagagcttatggaaataaggtgaaaacaccttatgaacatgtcataagttgt 34403933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 598 - 663
Target Start/End: Original strand, 34939526 - 34939591
Alignment:
Q  598 cataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||||| ||||| | ||||| ||||||||||||||||||||  | || |||||||||||||    
T  34939526 cataagctatcctgaagaggttatggaaataagctgaaaacaacttacggacgtgtcataagttgt 34939591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 591 - 663
Target Start/End: Original strand, 2455816 - 2455888
Alignment:
Q  591 ttattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||||||||||||||| || ||||||| ||||||| |||||| |  || ||  |||||||||||||||    
T  2455816 ttattttcataagctatcttggagagcttatggaaataagttgaaaatagtttatgggcatgtcataagttgt 2455888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 593 - 653
Target Start/End: Complemental strand, 17241314 - 17241254
Alignment:
Q  593 attttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgt 653  Q
    |||||||| |||||||||| || | ||||| ||||||| |||||||||||| |||||||||    
T  17241314 attttcattagctatcttggagagtttatggaaataagttgaaaacaacttatgaacatgt 17241254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 594 - 658
Target Start/End: Complemental strand, 19275697 - 19275633
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 658  Q
    ||||||||||||||| ||||| ||||||| |||||| | |||| || |||||| |||||||||||    
T  19275697 ttttcataagctatcatgaagagcttatggaaataaaccgaaatcagcttgtggacatgtcataa 19275633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 594 - 642
Target Start/End: Original strand, 20370892 - 20370940
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaact 642  Q
    |||||||| ||||||| | |||||||||||||||||| |||||||||||    
T  20370892 ttttcatatgctatctaggagtgcttatgaaaataagatgaaaacaact 20370940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 595 - 643
Target Start/End: Complemental strand, 20512704 - 20512656
Alignment:
Q  595 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 643  Q
    |||||||||||||  ||||| ||||||| ||||||||||||||||||||    
T  20512704 tttcataagctattatgaagagcttatggaaataagctgaaaacaactt 20512656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 591 - 663
Target Start/End: Complemental strand, 29837148 - 29837077
Alignment:
Q  591 ttattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||| ||||| ||||| |||||||||||| ||||| ||||||||| | || |||||| |||||||    
T  29837148 ttattttcataaactatcctgaagagcttatgaaaattagctg-aaacaacttataaatatgtcagaagttgt 29837077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 619 - 663
Target Start/End: Complemental strand, 33832309 - 33832265
Alignment:
Q  619 tatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||||| |||||||||| | |||||||||||||||||    
T  33832309 tatgaaaataagctaaaaacaacttataaacatgtcataagttgt 33832265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 619 - 658
Target Start/End: Original strand, 821833 - 821872
Alignment:
Q  619 tatgaaaataagctgaaaacaacttgtgaacatgtcataa 658  Q
    ||||||||||||||||||||| ||| ||||||||||||||    
T  821833 tatgaaaataagctgaaaacagcttatgaacatgtcataa 821872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 661
Target Start/End: Complemental strand, 8365037 - 8364970
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 661  Q
    ||||||||||||||| ||  |  || |||||||||||||||||||| ||||| |||||||||| ||||    
T  8365037 ttttcataagctatcatggtgaactgatgaaaataagctgaaaacagcttgtaaacatgtcatcagtt 8364970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 616 - 663
Target Start/End: Original strand, 31420976 - 31421023
Alignment:
Q  616 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||||||||||||||||||| |||| |||  |||||||||    
T  31420976 gcttatgaaaataagctgaaaacaacttatgaatatgcgataagttgt 31421023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 596 - 659
Target Start/End: Original strand, 34939755 - 34939818
Alignment:
Q  596 ttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||| || || | ||||| ||||||||||||||||| || || ||||||||||||    
T  34939755 ttcataagctatcctggagagtttatggaaataagctgaaaacaatttatggacatgtcataag 34939818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 596 - 662
Target Start/End: Complemental strand, 281907 - 281841
Alignment:
Q  596 ttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttg 662  Q
    ||||||||||||| |  || ||| ||| |||||||||||||||||||| |  |||||||||||||||    
T  281907 ttcataagctatcctagagagctcatggaaataagctgaaaacaacttatagacatgtcataagttg 281841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 617 - 659
Target Start/End: Original strand, 696634 - 696676
Alignment:
Q  617 cttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||    
T  696634 cttatgagaataagctgaaaacagcttatgaacatgtcataag 696676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 577 - 662
Target Start/End: Original strand, 10031723 - 10031809
Alignment:
Q  577 aaaataaagttaaa-ttattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttg 662  Q
    |||||||||||||| || |||| ||||||| ||||| || ||||| | ||||||| |||||||||||| || | ||||| |||||||    
T  10031723 aaaataaagttaaaattgtttttataagctgtcttggagagcttaaggaaataagatgaaaacaacttatggatatgtcgtaagttg 10031809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 616 - 658
Target Start/End: Complemental strand, 29296334 - 29296292
Alignment:
Q  616 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 658  Q
    |||||||||||||||||||||| ||||| || |||||||||||    
T  29296334 gcttatgaaaataagctgaaaataacttatggacatgtcataa 29296292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 594 - 632
Target Start/End: Complemental strand, 31812074 - 31812036
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagct 632  Q
    |||||||||||||||||| || |||||||||||||||||    
T  31812074 ttttcataagctatcttggagagcttatgaaaataagct 31812036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 624 - 661
Target Start/End: Complemental strand, 733208 - 733171
Alignment:
Q  624 aaataagctgaaaacaacttgtgaacatgtcataagtt 661  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  733208 aaatatgctgaaaacaacttgtggacatgtcataagtt 733171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 639
Target Start/End: Original strand, 1497990 - 1498035
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 639  Q
    ||||||||| |||||||| || ||||||||||||||| ||||||||    
T  1497990 ttttcataaactatcttggagagcttatgaaaataaggtgaaaaca 1498035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 618 - 663
Target Start/End: Original strand, 1575928 - 1575973
Alignment:
Q  618 ttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||||||| | |||||| ||| |||||||||||||||||||    
T  1575928 ttatgaaaataagttaaaaacagcttatgaacatgtcataagttgt 1575973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 639
Target Start/End: Original strand, 13907856 - 13907901
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 639  Q
    |||||| |||||||||||||| |||||||||||||| | |||||||    
T  13907856 ttttcaaaagctatcttgaagagcttatgaaaataaacggaaaaca 13907901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 616 - 657
Target Start/End: Complemental strand, 27909677 - 27909636
Alignment:
Q  616 gcttatgaaaataagctgaaaacaacttgtgaacatgtcata 657  Q
    ||||||| |||||||||||||||||||| || ||||||||||    
T  27909677 gcttatggaaataagctgaaaacaacttatggacatgtcata 27909636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 592 - 637
Target Start/End: Complemental strand, 32387118 - 32387073
Alignment:
Q  592 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaa 637  Q
    |||||||||||| |||  ||||| ||||||||||||||||||||||    
T  32387118 tattttcataagttattctgaagagcttatgaaaataagctgaaaa 32387073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 659
Target Start/End: Original strand, 33089515 - 33089580
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||||||||  | || |||||||||||||  |||||||||| | |||||||| ||||    
T  33089515 ttttcataagctatcttggggagcctatgaaaataagcgtaaaacaacttataaacatgtcctaag 33089580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 5e-18; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 604 - 659
Target Start/End: Original strand, 36139897 - 36139952
Alignment:
Q  604 ctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  36139897 ctatcttgaagagcttatgaaaataagctgaaaacagcttgtgaacatgtcataag 36139952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 604 - 659
Target Start/End: Original strand, 36101587 - 36101642
Alignment:
Q  604 ctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  36101587 ctatcctgaagagcttatgaaaataagctgaaaacagcttgtgaacatgtcataag 36101642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 594 - 661
Target Start/End: Original strand, 36887513 - 36887580
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 661  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||| ||| ||||||||||| |||||    
T  36887513 ttttcataagccatcttgaagaacttatgaaaataagctgaaaacatcttatgaacatgtcaaaagtt 36887580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 594 - 659
Target Start/End: Original strand, 21367676 - 21367742
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataag 659  Q
    |||||||||||||||||| ||  ||||||||||||||||||||||| ||||||||| ||||||||||    
T  21367676 ttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaacaatgtcataag 21367742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 574 - 639
Target Start/End: Complemental strand, 16790459 - 16790394
Alignment:
Q  574 gataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 639  Q
    ||||||||||| | |||||||||||||||||||||||| |  |||||||||||||| |||||||||    
T  16790459 gataaaataaaatcaaattattttcataagctatcttggatagcttatgaaaataaactgaaaaca 16790394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 594 - 663
Target Start/End: Original strand, 37273143 - 37273212
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||||||||| ||  |||||| ||||||| |||||||||||| || ||||||||||||||||    
T  37273143 ttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcataagttgt 37273212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 599 - 659
Target Start/End: Complemental strand, 23808120 - 23808060
Alignment:
Q  599 ataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||| || | ||||||||||||| ||||||||| ||||||||||||||||||    
T  23808120 ataagctatcttggagagtttatgaaaataagatgaaaacaatttgtgaacatgtcataag 23808060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 591 - 659
Target Start/End: Complemental strand, 54837098 - 54837030
Alignment:
Q  591 ttattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||||||||||| |  |||||| ||||||||| |||||||| || |||||||||||||||    
T  54837098 ttattttcataagctatcttggacagcttataaaaataagcggaaaacaagttatgaacatgtcataag 54837030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 594 - 657
Target Start/End: Original strand, 20669181 - 20669244
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcata 657  Q
    |||||||||||||||||| || ||||||| |||||||| ||||||| ||| |||||||||||||    
T  20669181 ttttcataagctatcttggagagcttatgtaaataagcggaaaacagcttatgaacatgtcata 20669244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 598 - 657
Target Start/End: Complemental strand, 33883807 - 33883748
Alignment:
Q  598 cataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcata 657  Q
    |||||||||||||  ||  ||||||||||||||||||||||||||| |||||||||||||    
T  33883807 cataagctatcttagagaacttatgaaaataagctgaaaacaacttatgaacatgtcata 33883748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 600 - 663
Target Start/End: Original strand, 42745053 - 42745116
Alignment:
Q  600 taagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||||| ||  ||||||| ||||||| |||||||||||| |||||||||||||||||||    
T  42745053 taagctatcttcaaaagcttatggaaataagatgaaaacaacttatgaacatgtcataagttgt 42745116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 592 - 659
Target Start/End: Complemental strand, 52440725 - 52440658
Alignment:
Q  592 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||||||||||  ||||||||||  ||||||||||| || |||||||||||| |||||||||||||||    
T  52440725 tattttcataatttatcttgaagaacttatgaaaattagttgaaaacaacttatgaacatgtcataag 52440658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 664
Target Start/End: Complemental strand, 39602271 - 39602201
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgtc 664  Q
    |||||||||||||||||  ||  |||||||||||||| ||||||||| || ||||||||||||||| ||||    
T  39602271 ttttcataagctatctttgagaacttatgaaaataagttgaaaacaatttatgaacatgtcataagctgtc 39602201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 656
Target Start/End: Original strand, 40665438 - 40665500
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcat 656  Q
    |||||||||| ||||||| || |||||| ||||||||||||||||| ||| ||||||||||||    
T  40665438 ttttcataagttatcttggagagcttataaaaataagctgaaaacagcttatgaacatgtcat 40665500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 659
Target Start/End: Original strand, 24785214 - 24785279
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||||| |  || ||||||| ||||||||| |||||||||| |||||||||||||||    
T  24785214 ttttcataagctatcctcgagagcttatgtaaataagctaaaaacaacttatgaacatgtcataag 24785279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 663
Target Start/End: Complemental strand, 30573975 - 30573906
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||||||||| || ||| ||||| |||||||||||||| ||| |||||||| ||||| ||||    
T  30573975 ttttcataagctatcttggagagctgatgaacataagctgaaaacagcttatgaacatgccataatttgt 30573906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 592 - 641
Target Start/End: Complemental strand, 34924601 - 34924552
Alignment:
Q  592 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaac 641  Q
    |||||||||||||||||||  || ||||||||||||||||||||||||||    
T  34924601 tattttcataagctatcttagagagcttatgaaaataagctgaaaacaac 34924552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 663
Target Start/End: Original strand, 52619012 - 52619081
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||| |||||||||||||| |||| |||||||||| |||||| | ||| |||||||||||||| ||||    
T  52619012 ttttcacaagctatcttgaagagcttgtgaaaataaggtgaaaatagcttatgaacatgtcataaattgt 52619081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 599 - 663
Target Start/End: Original strand, 36200110 - 36200174
Alignment:
Q  599 ataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||| || || ||| ||| |||||||||||||||||||| || ||||||||||||||||    
T  36200110 ataagctatcctgtagagctcatggaaataagctgaaaacaacttatggacatgtcataagttgt 36200174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 591 - 659
Target Start/End: Original strand, 45541577 - 45541645
Alignment:
Q  591 ttattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||||||||||| |   ||||||| ||||| ||||||||| ||| |||||||||||||||    
T  45541577 ttattttcataagctatcttggataacttatgagaataacctgaaaacagcttatgaacatgtcataag 45541645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 616 - 663
Target Start/End: Complemental strand, 3044298 - 3044251
Alignment:
Q  616 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||||||||| |||||||| ||| |||||||||||||||||||    
T  3044298 gcttatgaaaataagttgaaaacagcttatgaacatgtcataagttgt 3044251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 587 - 658
Target Start/End: Complemental strand, 45433007 - 45432936
Alignment:
Q  587 taaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataa 658  Q
    |||||| |||||| |||  ||| || || ||||||| |||||||||||||||||||| ||||||||||||||    
T  45433007 taaattgttttcacaagtcatcctgtagagcttatggaaataagctgaaaacaacttatgaacatgtcataa 45432936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 594 - 653
Target Start/End: Complemental strand, 53736181 - 53736122
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgt 653  Q
    ||||||||| ||||  ||||||| ||||||||||||||||||| |||||| |||||||||    
T  53736181 ttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatgaacatgt 53736122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 591 - 637
Target Start/End: Original strand, 2825153 - 2825199
Alignment:
Q  591 ttattttcataagctatcttgaagtgcttatgaaaataagctgaaaa 637  Q
    ||||||||||||||||||||| || ||||||||||||||||| ||||    
T  2825153 ttattttcataagctatcttggagagcttatgaaaataagcttaaaa 2825199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 640
Target Start/End: Complemental strand, 20502129 - 20502083
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaa 640  Q
    ||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  20502129 ttttcataagctatcctgaagagcttatgagaataagctgaaaacaa 20502083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 593 - 658
Target Start/End: Complemental strand, 36878819 - 36878753
Alignment:
Q  593 attttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataa 658  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||  |||||| || |||||||||    
T  36878819 attttcataagctatcttgaagaacttatgaaaaaaagctgaaaaccgcttgtggacaatgtcataa 36878753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 643
Target Start/End: Original strand, 2719477 - 2719526
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 643  Q
    |||||||||||||||||| ||  |||||||||||||||||| ||||||||    
T  2719477 ttttcataagctatcttggagaacttatgaaaataagctgagaacaactt 2719526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 659
Target Start/End: Original strand, 8933796 - 8933861
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||||||||| ||||||| || ||||||||||||||||| ||  |||||| || ||||||||||||    
T  8933796 ttttcataagttatcttggagagcttatgaaaataagctaaatgcaacttttggacatgtcataag 8933861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 616 - 661
Target Start/End: Original strand, 25925773 - 25925818
Alignment:
Q  616 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 661  Q
    ||||||||||||||| |||||||| ||| |||||||||||||||||    
T  25925773 gcttatgaaaataagttgaaaacagcttatgaacatgtcataagtt 25925818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 658
Target Start/End: Complemental strand, 35394559 - 35394494
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataa 658  Q
    |||||||||||||||||||||   ||||||||||||| |||||||| ||| ||||| |||||||||    
T  35394559 ttttcataagctatcttgaagaatttatgaaaataagttgaaaacagcttatgaacaatgtcataa 35394494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 574 - 659
Target Start/End: Original strand, 37825111 - 37825196
Alignment:
Q  574 gataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||| || |||||||||| |||| || |||| || || || ||||||| |||||| ||||||||||||| || ||||||||||||    
T  37825111 gataatatcaagttaaattgtttttattagctttcctggagagcttatggaaataacctgaaaacaacttatggacatgtcataag 37825196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 603 - 660
Target Start/End: Complemental strand, 47249538 - 47249481
Alignment:
Q  603 gctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagt 660  Q
    ||||||||| ||  |||||||||||||||  |||||||||| ||||||||||||||||    
T  47249538 gctatcttggaggacttatgaaaataagccaaaaacaacttatgaacatgtcataagt 47249481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 602 - 663
Target Start/End: Original strand, 47513670 - 47513731
Alignment:
Q  602 agctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||| || ||||||||||||||  |||||||||||| ||||| |||||||| ||||    
T  47513670 agctatcttggagagcttatgaaaataaattgaaaacaacttatgaacgtgtcataacttgt 47513731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 663
Target Start/End: Complemental strand, 50600239 - 50600170
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||| |||||| ||| ||  ||||||||||||||||||||||| || ||| ||||||||| ||||||    
T  50600239 ttttcatcagctatattggagaacttatgaaaataagctgaaaacagctcgtggacatgtcatgagttgt 50600170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 575 - 643
Target Start/End: Complemental strand, 12985425 - 12985357
Alignment:
Q  575 ataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 643  Q
    ||||||||||| |||| | ||||||||||||||| | |||  |||||| |||||||| |||||||||||    
T  12985425 ataaaataaagataaactgttttcataagctatcctcaagaacttatggaaataagccgaaaacaactt 12985357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 595 - 643
Target Start/End: Original strand, 13371127 - 13371175
Alignment:
Q  595 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 643  Q
    |||||||||||||  ||||| ||||||| ||||||||||||||||||||    
T  13371127 tttcataagctattatgaagagcttatggaaataagctgaaaacaactt 13371175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 594 - 650
Target Start/End: Complemental strand, 26320163 - 26320107
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaaca 650  Q
    |||||||||||| ||||||||  |||| |||||||| ||||||||||||| ||||||    
T  26320163 ttttcataagctctcttgaagaacttacgaaaataaactgaaaacaacttatgaaca 26320107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 583 - 643
Target Start/End: Original strand, 26478943 - 26479003
Alignment:
Q  583 aagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 643  Q
    |||||||||||||||||||||||||| | ||| |  |||||||||||| | ||||||||||    
T  26478943 aagttaaattattttcataagctatcctaaagagtatatgaaaataagttaaaaacaactt 26479003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 599 - 663
Target Start/End: Original strand, 29771852 - 29771916
Alignment:
Q  599 ataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||||||||   ||||||| ||||||| |||||||||||| || ||||||| ||||||||    
T  29771852 ataagctatcttgagaagcttatggaaataagttgaaaacaacttatggacatgtcctaagttgt 29771916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 594 - 657
Target Start/End: Complemental strand, 33965550 - 33965486
Alignment:
Q  594 ttttcataagctatcttgaagtgcttat-gaaaataagctgaaaacaacttgtgaacatgtcata 657  Q
    ||||||||||||||||||||| |||||| ||||| |||||||||| ||||| ||  |||||||||    
T  33965550 ttttcataagctatcttgaagagcttatggaaaaaaagctgaaaataacttatgggcatgtcata 33965486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 623 - 663
Target Start/End: Original strand, 41724250 - 41724290
Alignment:
Q  623 aaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||||||||||||||| || ||||||||||||||||    
T  41724250 aaaataagctgaaaacaacttatggacatgtcataagttgt 41724290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 661
Target Start/End: Original strand, 1816592 - 1816659
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 661  Q
    ||||||||||||||  || || |||||| ||||||||||||||||| | | |||| ||||||||||||    
T  1816592 ttttcataagctatactggagagcttatcaaaataagctgaaaacagcctatgaaaatgtcataagtt 1816659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 575 - 634
Target Start/End: Original strand, 13413920 - 13413979
Alignment:
Q  575 ataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctga 634  Q
    |||||||||| ||||  | ||||||||||||||||||||  |||||| ||||||||||||    
T  13413920 ataaaataaatttaagctgttttcataagctatcttgaacagcttatcaaaataagctga 13413979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 592 - 651
Target Start/End: Complemental strand, 25453922 - 25453863
Alignment:
Q  592 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacat 651  Q
    ||||||||||| ||||| || |  |||||||||||||||||||||| | |||||||||||    
T  25453922 tattttcataaactatcctggaaagcttatgaaaataagctgaaaagagcttgtgaacat 25453863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 592 - 643
Target Start/End: Complemental strand, 34414847 - 34414796
Alignment:
Q  592 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 643  Q
    ||||||||||| ||||| || || | ||||||||||||||||||||||||||    
T  34414847 tattttcataaactatcatggagagtttatgaaaataagctgaaaacaactt 34414796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 616 - 659
Target Start/End: Original strand, 36445856 - 36445899
Alignment:
Q  616 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||||| |||||||||||  |||||||||||||||    
T  36445856 gcttatgaaaataagatgaaaacaactaatgaacatgtcataag 36445899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 616 - 663
Target Start/End: Original strand, 43115087 - 43115134
Alignment:
Q  616 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||| ||||||||||||||||| || || ||||||||||||||||    
T  43115087 gcttatggaaataagctgaaaacaagttatggacatgtcataagttgt 43115134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 657
Target Start/End: Original strand, 51130759 - 51130822
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcata 657  Q
    ||||||||||||||| || || |||  |||||||||||||||| |||||| || ||||||||||    
T  51130759 ttttcataagctatcatggagagctattgaaaataagctgaaagcaacttatggacatgtcata 51130822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 617 - 659
Target Start/End: Original strand, 5391911 - 5391953
Alignment:
Q  617 cttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||||||||||||| |||||||| ||| |||||||||||||||    
T  5391911 cttatgaaaataagttgaaaacagcttatgaacatgtcataag 5391953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 617 - 659
Target Start/End: Original strand, 5396229 - 5396271
Alignment:
Q  617 cttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||||||||||||| ||| | |||||||||||||    
T  5396229 cttatgaaaataagctgaaaacaccttattaacatgtcataag 5396271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 617 - 659
Target Start/End: Complemental strand, 39723278 - 39723236
Alignment:
Q  617 cttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||    
T  39723278 cttatgagaataagctgaaaacagcttatgaacatgtcataag 39723236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 594 - 640
Target Start/End: Original strand, 41633369 - 41633415
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaa 640  Q
    ||||||| |||||| ||| || |||||||||||||||||||||||||    
T  41633369 ttttcatcagctattttggagagcttatgaaaataagctgaaaacaa 41633415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 522 - 568
Target Start/End: Complemental strand, 49465826 - 49465780
Alignment:
Q  522 tttatagcataaacatttatcatgaaaaacgcctatgtgtaagctat 568  Q
    |||||||||||| || ||||||||| |||||| ||||||||||||||    
T  49465826 tttatagcataatcacttatcatgagaaacgcttatgtgtaagctat 49465780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 659
Target Start/End: Complemental strand, 1217861 - 1217796
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||||| |  ||  ||||||||| |||| |||||||||||| || ||||||||||||    
T  1217861 ttttcataagctatccttgagaacttatgaaagtaagatgaaaacaacttatggacatgtcataag 1217796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 591 - 632
Target Start/End: Original strand, 14145918 - 14145959
Alignment:
Q  591 ttattttcataagctatcttgaagtgcttatgaaaataagct 632  Q
    ||||||||||||||||||||| | | ||||||||||||||||    
T  14145918 ttattttcataagctatcttggattacttatgaaaataagct 14145959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 643
Target Start/End: Complemental strand, 20170769 - 20170720
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 643  Q
    ||||| |||||||||||| || ||||||| ||||||||| ||||||||||    
T  20170769 ttttcctaagctatcttgtagagcttatgcaaataagctaaaaacaactt 20170720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 663
Target Start/End: Original strand, 21574499 - 21574568
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||| |||||||| | || || ||||||| ||||||||| ||| || ||| |||||||||||||||||||    
T  21574499 tttttataagctaacatggagagcttatggaaataagctaaaagcagcttatgaacatgtcataagttgt 21574568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 643
Target Start/End: Original strand, 34382951 - 34383000
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 643  Q
    ||||||||||||||| ||||  ||||| ||||||||| ||||||||||||    
T  34382951 ttttcataagctatcctgaaaagcttaagaaaataagatgaaaacaactt 34383000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 595 - 659
Target Start/End: Complemental strand, 34610866 - 34610801
Alignment:
Q  595 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaac-atgtcataag 659  Q
    |||||||||||||||||  |  ||||||||||| |||||||||| |||| ||||| ||||||||||    
T  34610866 tttcataagctatcttggcgaacttatgaaaatcagctgaaaaccacttatgaacaatgtcataag 34610801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 616 - 657
Target Start/End: Original strand, 34954113 - 34954154
Alignment:
Q  616 gcttatgaaaataagctgaaaacaacttgtgaacatgtcata 657  Q
    |||||||||||||||||||||||| ||  |||||||||||||    
T  34954113 gcttatgaaaataagctgaaaacagctcatgaacatgtcata 34954154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 595 - 656
Target Start/End: Original strand, 41671320 - 41671381
Alignment:
Q  595 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcat 656  Q
    |||||||||||||||||||    ||||||||||||| |||||||||||| |  |||||||||    
T  41671320 tttcataagctatcttgaaaaatttatgaaaataagttgaaaacaacttatagacatgtcat 41671381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 574 - 643
Target Start/End: Complemental strand, 46407975 - 46407906
Alignment:
Q  574 gataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 643  Q
    |||||| |||||||||| | ||||||||||||||  ||| | |||| ||||||||||||  |||||||||    
T  46407975 gataaagtaaagttaaactgttttcataagctattgtgatgagcttgtgaaaataagctagaaacaactt 46407906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 659
Target Start/End: Complemental strand, 54180841 - 54180776
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||||  || || ||||||  ||||||||| |||||||||| || ||||||||||||    
T  54180841 ttttcataagctattatggagagcttatataaataagctaaaaacaacttatggacatgtcataag 54180776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 2e-17; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 587 - 657
Target Start/End: Complemental strand, 28300367 - 28300297
Alignment:
Q  587 taaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcata 657  Q
    |||| |||||||||| |||||||||||| ||||||||||||||| ||||||||||||  ||||||||||||    
T  28300367 taaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 28300297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 594 - 659
Target Start/End: Original strand, 23819098 - 23819163
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||||||||||| ||||||  ||||||| |||||||||||| || ||||||||||||    
T  23819098 ttttcataagctatcttgaagagcttatagaaataagatgaaaacaacttatggacatgtcataag 23819163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 594 - 638
Target Start/End: Original strand, 47800632 - 47800676
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaac 638  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  47800632 ttttcataagctatcttgaagagcttatgaaaataagctgaaaac 47800676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 663
Target Start/End: Original strand, 2996582 - 2996651
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||||||||| || || |||||||||||| |||||| | ||| || ||||||||||||||||    
T  2996582 ttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggacatgtcataagttgt 2996651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 663
Target Start/End: Original strand, 4471177 - 4471246
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||||||||||||||  |||| |||||||||| |||| ||||||| || | ||||||||||||||    
T  4471177 ttttcataagctatcttgaaaagcttctgaaaataagttgaatacaacttatggatatgtcataagttgt 4471246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 651
Target Start/End: Original strand, 17884077 - 17884134
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacat 651  Q
    |||||||||||||| ||| || |||||||||||| ||||||||||||||| |||||||    
T  17884077 ttttcataagctatattggagagcttatgaaaattagctgaaaacaacttatgaacat 17884134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 574 - 659
Target Start/End: Complemental strand, 21043316 - 21043231
Alignment:
Q  574 gataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||||| || ||||||| | ||||||||||||||| ||||| || ||||||||||  ||||||||| ||| ||||| |||||||||    
T  21043316 gataaattatagttaaactgttttcataagctatcctgaagagcatatgaaaatacactgaaaacagcttatgaacgtgtcataag 21043231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 659
Target Start/End: Original strand, 29263379 - 29263444
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||||| || || |||| || |||||||||||||||||||| ||||||| |||||||    
T  29263379 ttttcataagctatcctgcagagcttgtggaaataagctgaaaacaacttatgaacatatcataag 29263444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 651
Target Start/End: Original strand, 47145971 - 47146028
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacat 651  Q
    ||||||||| || |||||||| ||||||||||||||| |||||||||||| |||||||    
T  47145971 ttttcataaactgtcttgaagagcttatgaaaataaggtgaaaacaacttatgaacat 47146028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 659
Target Start/End: Complemental strand, 52746901 - 52746836
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||||||||||||||||| |  |||||||||||| ||||||||||| ||| |||||||||| ||||    
T  52746901 ttttcataagctatcttgtaaggcttatgaaaatcagctgaaaacagcttatgaacatgtcttaag 52746836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 594 - 643
Target Start/End: Complemental strand, 53673719 - 53673670
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 643  Q
    |||||||||||||||||| || ||||||| ||||||||||||||||||||    
T  53673719 ttttcataagctatcttggagagcttatgtaaataagctgaaaacaactt 53673670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 575 - 638
Target Start/End: Original strand, 4500836 - 4500899
Alignment:
Q  575 ataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaac 638  Q
    |||||| ||||||||||| |||||| ||||||| ||| || | |||||||||||||||||||||    
T  4500836 ataaaacaaagttaaattgttttcaaaagctattttggagagattatgaaaataagctgaaaac 4500899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 594 - 661
Target Start/End: Complemental strand, 46019690 - 46019623
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagtt 661  Q
    |||||||||| ||||  |||| ||||||||| ||||| |||||||||||| | |||||||||||||||    
T  46019690 ttttcataagttatcccgaagagcttatgaatataagttgaaaacaacttatcaacatgtcataagtt 46019623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 592 - 639
Target Start/End: Original strand, 51630118 - 51630165
Alignment:
Q  592 tattttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 639  Q
    |||||||||||||||||||||||   ||||||||||||||||||||||    
T  51630118 tattttcataagctatcttgaagaatttatgaaaataagctgaaaaca 51630165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 656
Target Start/End: Complemental strand, 7694071 - 7694009
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcat 656  Q
    |||||||||| |||| || || | ||||| |||||||||||||||||||| ||||||||||||    
T  7694071 ttttcataagttatcctggagagtttatggaaataagctgaaaacaacttatgaacatgtcat 7694009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 614 - 656
Target Start/End: Original strand, 24747348 - 24747390
Alignment:
Q  614 gtgcttatgaaaataagctgaaaacaacttgtgaacatgtcat 656  Q
    |||| ||||||||||||||||||||||||| ||||||||||||    
T  24747348 gtgcatatgaaaataagctgaaaacaacttatgaacatgtcat 24747390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 655
Target Start/End: Complemental strand, 4798627 - 4798566
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtca 655  Q
    |||||||||||||||||| || ||||||| ||||||||| |||||| ||| || ||||||||    
T  4798627 ttttcataagctatcttggagagcttatgcaaataagctcaaaacagcttatgtacatgtca 4798566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 585 - 638
Target Start/End: Original strand, 18011871 - 18011924
Alignment:
Q  585 gttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaac 638  Q
    |||||| | ||||||||||||||||||||| | ||||||||||||||| |||||    
T  18011871 gttaaactgttttcataagctatcttgaagagtttatgaaaataagctaaaaac 18011924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 643
Target Start/End: Complemental strand, 18628604 - 18628555
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 643  Q
    |||||||||| ||||||| || ||||||| ||||||||||||||||||||    
T  18628604 ttttcataagttatcttggagagcttatggaaataagctgaaaacaactt 18628555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 574 - 659
Target Start/End: Original strand, 35743271 - 35743356
Alignment:
Q  574 gataaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||||||||  ||| || |||||||| ||||| ||||| | ||||| ||||||| || ||||||||| | |||||||||||||    
T  35743271 gataaaataaaggcaaactactttcataaactatcatgaagagtttatggaaataagttggaaacaacttataaacatgtcataag 35743356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 663
Target Start/End: Complemental strand, 40532655 - 40532586
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||| ||||| || || || ||||||||| |||||||||||| ||||||| | |||||||||    
T  40532655 ttttcataagctgtcttggagagcctacgaaaataagatgaaaacaacttatgaacatataataagttgt 40532586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 574 - 643
Target Start/End: Complemental strand, 5131335 - 5131262
Alignment:
Q  574 gataaaataaagttaaattattttcat----aagctatcttgaagtgcttatgaaaataagctgaaaacaactt 643  Q
    ||||||||||||||||| | |||||||    |||||||| || || ||||||| ||||||||||||||||||||    
T  5131335 gataaaataaagttaaaatgttttcatgtaaaagctatcctggagagcttatggaaataagctgaaaacaactt 5131262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 595 - 659
Target Start/End: Original strand, 44249295 - 44249359
Alignment:
Q  595 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    |||||||| |||||||| || | |||||||||||||||||| | ||||| | |||||||||||||    
T  44249295 tttcataaactatcttggagagtttatgaaaataagctgaagaaaacttatcaacatgtcataag 44249359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 616 - 659
Target Start/End: Original strand, 1137743 - 1137786
Alignment:
Q  616 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||| |||||| ||||||||||||| |||||||||||||||    
T  1137743 gcttatggaaataaactgaaaacaacttatgaacatgtcataag 1137786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 619 - 658
Target Start/End: Complemental strand, 8469413 - 8469374
Alignment:
Q  619 tatgaaaataagctgaaaacaacttgtgaacatgtcataa 658  Q
    |||| |||||||||||||||||||| ||||||||||||||    
T  8469413 tatggaaataagctgaaaacaacttatgaacatgtcataa 8469374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 576 - 643
Target Start/End: Complemental strand, 25548207 - 25548140
Alignment:
Q  576 taaaataaagttaaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 643  Q
    |||||||||||||| || ||||||||| ||||   | || ||||||||||||||| ||||||||||||    
T  25548207 taaaataaagttaagttgttttcataaactatacagcagagcttatgaaaataagttgaaaacaactt 25548140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 659
Target Start/End: Complemental strand, 42641702 - 42641635
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaa-ataagctg-aaaacaacttgtgaacatgtcataag 659  Q
    |||||||||||||| |||  | |||||||||| |||||||| |||||| |||||||||||||||||||    
T  42641702 ttttcataagctattttggtgagcttatgaaatataagctgcaaaacagcttgtgaacatgtcataag 42641635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 616 - 659
Target Start/End: Original strand, 43824314 - 43824357
Alignment:
Q  616 gcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||||| |||||||||||||||||||| |||||||| ||||||    
T  43824314 gcttatggaaataagctgaaaacaacttatgaacatgccataag 43824357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 624 - 663
Target Start/End: Original strand, 46401303 - 46401342
Alignment:
Q  624 aaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||||||| ||||||| |||||||||||||||||||    
T  46401303 aaataagctgaatacaacttatgaacatgtcataagttgt 46401342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 653
Target Start/End: Complemental strand, 55084542 - 55084483
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgt 653  Q
    ||||||| |||||||||  || ||||||||||||||||||||| || ||| |||||||||    
T  55084542 ttttcatgagctatcttagagagcttatgaaaataagctgaaaccagcttatgaacatgt 55084483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 594 - 660
Target Start/End: Complemental strand, 825551 - 825485
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagt 660  Q
    |||||||||||||| ||| ||  |||||||||||||||||||||||  |  ||| ||||||||||||    
T  825551 ttttcataagctattttggagaacttatgaaaataagctgaaaacagttaatgagcatgtcataagt 825485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 594 - 632
Target Start/End: Complemental strand, 2111111 - 2111073
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagct 632  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  2111111 ttttcataagctatcttgaaggacttatgaaaataagct 2111073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 617 - 663
Target Start/End: Original strand, 4691880 - 4691926
Alignment:
Q  617 cttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||||||||||||||||||| | ||  |||||||||||||||    
T  4691880 cttatgaaaataagctgaaaacaacatatgggcatgtcataagttgt 4691926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 594 - 632
Target Start/End: Original strand, 29778804 - 29778842
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagct 632  Q
    ||||||||||||| ||||||| |||||||||||||||||    
T  29778804 ttttcataagctaccttgaagagcttatgaaaataagct 29778842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 594 - 636
Target Start/End: Original strand, 30631248 - 30631290
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaa 636  Q
    ||||||| | |||||| ||||||||||||||||||||||||||    
T  30631248 ttttcattacctatctggaagtgcttatgaaaataagctgaaa 30631290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 587 - 663
Target Start/End: Original strand, 53155265 - 53155338
Alignment:
Q  587 taaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||| ||||||||||||||||| ||||   ||| |||||||||||||||| ||| || |  ||||||||||||||||    
T  53155265 taaactattttcataagctatcatgaa---cttgtgaaaataagctgaaagcaatttatagacatgtcataagttgt 53155338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 639
Target Start/End: Original strand, 3155612 - 3155657
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 639  Q
    ||||||||| |||||||||||  || ||||||||||||||||||||    
T  3155612 ttttcataaactatcttgaagaactaatgaaaataagctgaaaaca 3155657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 598 - 639
Target Start/End: Original strand, 14011247 - 14011288
Alignment:
Q  598 cataagctatcttgaagtgcttatgaaaataagctgaaaaca 639  Q
    |||||||||||||| || ||||||| ||||||||||||||||    
T  14011247 cataagctatcttggagagcttatggaaataagctgaaaaca 14011288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 600 - 637
Target Start/End: Complemental strand, 30377470 - 30377433
Alignment:
Q  600 taagctatcttgaagtgcttatgaaaataagctgaaaa 637  Q
    |||||||||||| || ||||||||||||||||||||||    
T  30377470 taagctatcttggagagcttatgaaaataagctgaaaa 30377433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 639
Target Start/End: Complemental strand, 35290248 - 35290203
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaaca 639  Q
    ||||||||||||||||| ||| |||||  |||||||||||||||||    
T  35290248 ttttcataagctatctttaagagcttactaaaataagctgaaaaca 35290203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 616 - 657
Target Start/End: Original strand, 42461282 - 42461323
Alignment:
Q  616 gcttatgaaaataagctgaaaacaacttgtgaacatgtcata 657  Q
    ||||||||||||||||||||| |||||| |||||| ||||||    
T  42461282 gcttatgaaaataagctgaaatcaacttatgaacacgtcata 42461323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 587 - 656
Target Start/End: Original strand, 43932437 - 43932506
Alignment:
Q  587 taaattattttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcat 656  Q
    |||| |||||||||||| |||  |||||  ||| |||||||||| |||||||||||| || |||||||||    
T  43932437 taaactattttcataagttattctgaagaacttgtgaaaataagatgaaaacaacttatggacatgtcat 43932506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 624 - 661
Target Start/End: Original strand, 46201387 - 46201424
Alignment:
Q  624 aaataagctgaaaacaacttgtgaacatgtcataagtt 661  Q
    |||||||||||||||||| | |||||||||||||||||    
T  46201387 aaataagctgaaaacaacctatgaacatgtcataagtt 46201424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 663
Target Start/End: Complemental strand, 46415853 - 46415784
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||||||||| |  || |||||  ||||| ||||||||||||||| || |||||||||| |||||    
T  46415853 ttttcataagctatcctcgagagcttagtaaaattagctgaaaacaacttatggacatgtcataggttgt 46415784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 596 - 641
Target Start/End: Complemental strand, 47119024 - 47118979
Alignment:
Q  596 ttcataagctatcttgaagtgcttatgaaaataagctgaaaacaac 641  Q
    |||||| ||||||||||||  |||||||| ||||||||||||||||    
T  47119024 ttcatatgctatcttgaagaacttatgaagataagctgaaaacaac 47118979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 643
Target Start/End: Original strand, 49219148 - 49219197
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 643  Q
    ||||||||| ||||||| ||| | ||||| ||||||||||||||||||||    
T  49219148 ttttcataaactatcttaaagagattatggaaataagctgaaaacaactt 49219197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 659
Target Start/End: Original strand, 52735131 - 52735195
Alignment:
Q  594 ttttcataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataag 659  Q
    ||||| ||||||||||||||| ||||||| ||||||||| |||| ||| | || ||||||||||||    
T  52735131 ttttcgtaagctatcttgaagagcttatggaaataagct-aaaataacatatggacatgtcataag 52735195  T

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Target: scaffold0147 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 599 - 663
Target Start/End: Complemental strand, 4991 - 4927
Alignment:
Q  599 ataagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||||||| |||| || ||||||| |  ||||||||||||||||| ||||||||| |||||||||    
T  4991 ataagctaccttggagagcttatggagttaagctgaaaacaacttatgaacatgttataagttgt 4927  T

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Target: scaffold0147; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 601 - 663
Target Start/End: Complemental strand, 12758 - 12696
Alignment:
Q  601 aagctatcttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    ||||||||||  || ||||||| |  ||||||||||||||||| || ||||||||||||||||    
T  12758 aagctatcttagagagcttatggagctaagctgaaaacaacttatggacatgtcataagttgt 12696  T

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Target: scaffold0089 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 595 - 643
Target Start/End: Complemental strand, 33687 - 33639
Alignment:
Q  595 tttcataagctatcttgaagtgcttatgaaaataagctgaaaacaactt 643  Q
    |||||||||||||  ||||| ||||||| ||||||||||||||||||||    
T  33687 tttcataagctattatgaagagcttatggaaataagctgaaaacaactt 33639  T

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Target: scaffold0311 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 608 - 663
Target Start/End: Complemental strand, 10664 - 10609
Alignment:
Q  608 cttgaagtgcttatgaaaataagctgaaaacaacttgtgaacatgtcataagttgt 663  Q
    |||| |||| ||||| |||||||||||||||||||| || ||||||||| ||||||    
T  10664 cttgtagtgtttatggaaataagctgaaaacaacttatggacatgtcattagttgt 10609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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