View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0718_low_60 (Length: 268)

Name: NF0718_low_60
Description: NF0718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0718_low_60
NF0718_low_60
[»] chr1 (14 HSPs)
chr1 (1-121)||(26236703-26236823)
chr1 (5-111)||(14351003-14351108)
chr1 (28-106)||(10494882-10494960)
chr1 (31-121)||(15495977-15496067)
chr1 (3-111)||(32058637-32058745)
chr1 (3-111)||(34654939-34655047)
chr1 (2-57)||(39709050-39709105)
chr1 (15-107)||(615726-615818)
chr1 (58-121)||(26842000-26842063)
chr1 (36-96)||(2077365-2077425)
chr1 (2-73)||(11814812-11814883)
chr1 (27-57)||(11408062-11408092)
chr1 (51-121)||(29099633-29099703)
chr1 (66-107)||(39709102-39709143)
[»] chr3 (3 HSPs)
chr3 (7-107)||(18269763-18269863)
chr3 (2-115)||(43275936-43276049)
chr3 (51-106)||(31699315-31699370)
[»] chr5 (13 HSPs)
chr5 (3-107)||(7767058-7767162)
chr5 (2-111)||(27170141-27170250)
chr5 (14-111)||(7271795-7271892)
chr5 (7-106)||(6030388-6030487)
chr5 (2-111)||(18696894-18697003)
chr5 (23-96)||(26331063-26331136)
chr5 (12-111)||(38958233-38958333)
chr5 (31-121)||(40680974-40681064)
chr5 (36-107)||(40599873-40599944)
chr5 (28-95)||(12156477-12156544)
chr5 (6-57)||(41355579-41355630)
chr5 (41-111)||(24867069-24867139)
chr5 (59-111)||(41355620-41355672)
[»] chr2 (11 HSPs)
chr2 (6-121)||(1895361-1895476)
chr2 (7-111)||(34660247-34660351)
chr2 (6-122)||(17282000-17282117)
chr2 (15-107)||(4869610-4869702)
chr2 (6-121)||(3921543-3921658)
chr2 (2-111)||(17375238-17375347)
chr2 (12-110)||(1551660-1551758)
chr2 (2-104)||(14950310-14950412)
chr2 (36-107)||(9910734-9910805)
chr2 (51-121)||(6705609-6705679)
chr2 (51-120)||(40900294-40900363)
[»] chr7 (2 HSPs)
chr7 (2-111)||(3302536-3302645)
chr7 (27-111)||(21590491-21590575)
[»] chr4 (11 HSPs)
chr4 (2-111)||(23054285-23054394)
chr4 (6-121)||(53202216-53202332)
chr4 (6-122)||(47518507-47518623)
chr4 (6-110)||(34227074-34227178)
chr4 (46-121)||(45873210-45873285)
chr4 (6-111)||(38093334-38093439)
chr4 (12-107)||(12469344-12469439)
chr4 (39-111)||(55728810-55728882)
chr4 (5-58)||(6410005-6410058)
chr4 (29-103)||(12485485-12485559)
chr4 (58-111)||(24957685-24957738)
[»] chr6 (4 HSPs)
chr6 (6-110)||(20740540-20740644)
chr6 (6-111)||(21881428-21881533)
chr6 (2-106)||(30845524-30845627)
chr6 (38-101)||(34213489-34213552)
[»] chr8 (5 HSPs)
chr8 (2-101)||(5994601-5994700)
chr8 (2-110)||(6443997-6444105)
chr8 (3-111)||(10408786-10408894)
chr8 (31-121)||(15050051-15050141)
chr8 (36-106)||(23635948-23636018)
[»] scaffold0092 (1 HSPs)
scaffold0092 (31-111)||(23284-23364)
[»] scaffold0044 (1 HSPs)
scaffold0044 (27-111)||(42781-42865)
[»] scaffold0157 (1 HSPs)
scaffold0157 (29-103)||(34918-34992)


Alignment Details
Target: chr1 (Bit Score: 101; Significance: 4e-50; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 26236703 - 26236823
Alignment:
Q  1 cctgttatgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcg 100  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26236703 cctgttatgggttcgatggatctttggttgcgttggtttgtggtgcttcatggtggttttcatgatggtgctgattttgagtcttttgtggtggtgctcg 26236802  T
Q  101 tggtggtttttagtgatgatg 121  Q
    ||||||||||||||| |||||    
T  26236803 tggtggtttttagtggtgatg 26236823  T

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Target: chr1; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 14351003 - 14351108
Alignment:
Q  5 ttatgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggt 104  Q
    |||||| || |||| || ||| ||||||||||||||||||| ||| |||||||||||||| |||||||||| |||  | |||||||||||| ||||||||    
T  14351003 ttatggttttgatgaattttttgttgtgttggtttgtggtggttcgtggtggttttcatg-tggtgttgatattggattttttgtggtggttctcgtggt 14351101  T
Q  105 ggttttt 111  Q
    |||||||    
T  14351102 ggttttt 14351108  T

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Target: chr1; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 10494960 - 10494882
Alignment:
Q  28 ttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtgg 106  Q
    ||||||||||||| |||||||  || ||||||||||| |||||||||| ||| |||||||||| |||||||||||||||    
T  10494960 ttgtgttggtttgcggtgctttgtgatggttttcatggtggtgttgatattgggtcttttgtgttggtgctcgtggtgg 10494882  T

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Target: chr1; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 15496067 - 15495977
Alignment:
Q  31 tgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtggtttttagtgatgatg 121  Q
    |||||| |||||||| ||| |||||||||||||| ||||| ||||  |  ||||||||||||||||||||||||||||||| ||| |||||    
T  15496067 tgttggattgtggtgtttcgtggtggttttcatggtggtgctgatacttggtcttttgtggtggtgctcgtggtggtttttggtggtgatg 15495977  T

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Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 32058745 - 32058637
Alignment:
Q  3 tgttatgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtg 102  Q
    |||||||| || ||||||| ||| | ||||||||||| ||||||||| ||||||||| |  | ||||| ||||  |||||||||||||| |||||| |||    
T  32058745 tgttatggtttagatggatttttggctgtgttggtttatggtgcttcgtggtggtttccgcggtggtgatgatactgagtcttttgtggaggtgcttgtg 32058646  T
Q  103 gtggttttt 111  Q
    |||||||||    
T  32058645 gtggttttt 32058637  T

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Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 34655047 - 34654939
Alignment:
Q  3 tgttatgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtg 102  Q
    |||||||| || |||| || |||  |||||||||||||||||||||||||| |||||||||| ||||| ||||||||  ||||| ||||  | |||||||    
T  34655047 tgttatggttttgatgcatctttgattgtgttggtttgtggtgcttcatggcggttttcatggtggtgctgattttggatctttggtggcagagctcgtg 34654948  T
Q  103 gtggttttt 111  Q
    || ||||||    
T  34654947 gtagttttt 34654939  T

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Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 39709050 - 39709105
Alignment:
Q  2 ctgttatgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggt 57  Q
    ||||||||| || ||||||| ||| |||||||||||||||||||||||||||||||    
T  39709050 ctgttatggttttgatggatctttggttgtgttggtttgtggtgcttcatggtggt 39709105  T

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Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 615818 - 615726
Alignment:
Q  15 gatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtggt 107  Q
    ||||||| ||| |||||||| |||||||||||||||||  |||||||||| ||||| ||| ||||  |||||||||| |   |||||||||||    
T  615818 gatggatctttggttgtgttagtttgtggtgcttcatgacggttttcatggtggtgctgaatttggctcttttgtggcgagactcgtggtggt 615726  T

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Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 121
Target Start/End: Original strand, 26842000 - 26842063
Alignment:
Q  58 tttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtggtttttagtgatgatg 121  Q
    ||||||| ||||||||||  || ||||||||||||||||||||||||| ||||| ||| |||||    
T  26842000 tttcatggtggtgttgatactgggtcttttgtggtggtgctcgtggtgatttttggtgttgatg 26842063  T

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Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 2077365 - 2077425
Alignment:
Q  36 gtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtg 96  Q
    ||||||||| |||| ||||||||| |||| ||||||||||  || ||||||||||||||||    
T  2077365 gtttgtggtacttcgtggtggtttccatggtggtgttgatactgggtcttttgtggtggtg 2077425  T

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Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 11814883 - 11814812
Alignment:
Q  2 ctgttatgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttg 73  Q
    ||||||||| || |||| |  ||| |||||||| |||||||||||||| ||||||||| |||| ||||||||    
T  11814883 ctgttatggttttgatgaaattttggttgtgtttgtttgtggtgcttcgtggtggtttccatggtggtgttg 11814812  T

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Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 57
Target Start/End: Original strand, 11408062 - 11408092
Alignment:
Q  27 gttgtgttggtttgtggtgcttcatggtggt 57  Q
    |||||||||||||||||||||||||||||||    
T  11408062 gttgtgttggtttgtggtgcttcatggtggt 11408092  T

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Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 121
Target Start/End: Complemental strand, 29099703 - 29099633
Alignment:
Q  51 tggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtggtttttagtgatgatg 121  Q
    ||||||||| |||| ||||| ||||  || ||||| |||||||||||||||||||||| || ||| |||||    
T  29099703 tggtggtttccatggtggtgctgatactgggtcttctgtggtggtgctcgtggtggttcttggtggtgatg 29099633  T

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Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 39709102 - 39709143
Alignment:
Q  66 tggtgttgattttgagtcttttgtggtggtgctcgtggtggt 107  Q
    |||||||||||||| ||||||||| |||| ||||||||||||    
T  39709102 tggtgttgattttgggtcttttgtcgtggggctcgtggtggt 39709143  T

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Target: chr3 (Bit Score: 77; Significance: 8e-36; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 18269763 - 18269863
Alignment:
Q  7 atgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtgg 106  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||    
T  18269763 atggtttcgatggatctttggttgtgttggtttgtggtgcttcatggtggttttcatggtggtgttgattttgggtcttttgtggtggggctcgtggtgg 18269862  T
Q  107 t 107  Q
    |    
T  18269863 t 18269863  T

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Target: chr3; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 43276049 - 43275936
Alignment:
Q  2 ctgttatgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgt 101  Q
    ||||||||  ||||||| || ||| ||||||||||||||||||||||||||    |||| ||| ||||| |||||||| ||||||||||| || ||||||    
T  43276049 ctgttatgatttcgatgaatctttggttgtgttggtttgtggtgcttcatgacaatttttatggtggtgctgattttgggtcttttgtggcggagctcgt 43275950  T
Q  102 ggtggtttttagtg 115  Q
    ||||||||||||||    
T  43275949 ggtggtttttagtg 43275936  T

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Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 31699370 - 31699315
Alignment:
Q  51 tggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtgg 106  Q
    ||||||||| |||| |||||||| | ||| ||||||||||||||||||||||||||    
T  31699370 tggtggtttccatggtggtgttggtattgggtcttttgtggtggtgctcgtggtgg 31699315  T

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Target: chr5 (Bit Score: 69; Significance: 5e-31; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 7767058 - 7767162
Alignment:
Q  3 tgttatgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtg 102  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||||||||| || ||||||| |||||||||||||| ||||||||||| || |||||||    
T  7767058 tgttatggtttcgatggatctttggttgtgttggtttgtggtgcttcatggcgggtttcatggtggtgttgattttgggtcttttgtggcggggctcgtg 7767157  T
Q  103 gtggt 107  Q
    |||||    
T  7767158 gtggt 7767162  T

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Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 27170141 - 27170250
Alignment:
Q  2 ctgttatgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgt 101  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||||||||| |||||||||| ||||| | |||||| ||||||||||| || |||| |    
T  27170141 ctgttatggtttcgatggatctttggttgtgttggtttgtggtgcttcatggcggttttcatggtggtgctaattttgggtcttttgtggcggggctcat 27170240  T
Q  102 ggtggttttt 111  Q
    ||||||||||    
T  27170241 ggtggttttt 27170250  T

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Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 7271892 - 7271795
Alignment:
Q  14 cgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtggttttt 111  Q
    |||||||| ||| ||||||||||||||||||||||||||| |||||||||| ||||| |||||||| || |||||||| |  ||||||||||||||||    
T  7271892 cgatggatctttggttgtgttggtttgtggtgcttcatggcggttttcatggtggtgctgattttgggtgttttgtggcgaggctcgtggtggttttt 7271795  T

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Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 106
Target Start/End: Original strand, 6030388 - 6030487
Alignment:
Q  7 atgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtgg 106  Q
    |||| |||||||||| ||| ||||||||||||||||||||||| ||  |||||||||| ||||| |||||||| ||||||||||| || |||||||||||    
T  6030388 atggtttcgatggatctttggttgtgttggtttgtggtgcttcctgacggttttcatggtggtgctgattttgggtcttttgtggcggggctcgtggtgg 6030487  T

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Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 18697003 - 18696894
Alignment:
Q  2 ctgttatgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgt 101  Q
    |||||||||||||| ||||| ||| ||||||||||||||||||||||||||| | |||||||| || || ||||||||  |||||||||  || ||||||    
T  18697003 ctgttatgggttcggtggatctttggttgtgttggtttgtggtgcttcatggcgtttttcatggtgttgctgattttggatcttttgtgacggggctcgt 18696904  T
Q  102 ggtggttttt 111  Q
    ||||| ||||    
T  18696903 ggtggatttt 18696894  T

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Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 26331063 - 26331136
Alignment:
Q  23 tttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtg 96  Q
    ||||||||||||||||||||||||||| |||||||||  ||| |||||||||| ||||||||||||||||||||    
T  26331063 tttagttgtgttggtttgtggtgcttcgtggtggtttctatggtggtgttgatattgagtcttttgtggtggtg 26331136  T

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Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 38958233 - 38958333
Alignment:
Q  12 ttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtc-ttttgtggtggtgctcgtggtggtttt 110  Q
    |||||||||| ||| |||||||||||||||| | |||||||||||||||  |||||||| |||||||| ||| |||| ||| || |||||||||||||||    
T  38958233 ttcgatggatctttggttgtgttggtttgtgatacttcatggtggtttttttgatggtgctgattttgggtctttttttggcggggctcgtggtggtttt 38958332  T
Q  111 t 111  Q
    |    
T  38958333 t 38958333  T

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Target: chr5; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 40681064 - 40680974
Alignment:
Q  31 tgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtggtttttagtgatgatg 121  Q
    |||||| |||||||| |||||||||||||| ||| ||||||||||  |  ||||||||||||||||||| ||||||||||| ||| |||||    
T  40681064 tgttggattgtggtgtttcatggtggtttttatggtggtgttgatacttggtcttttgtggtggtgctcatggtggtttttggtggtgatg 40680974  T

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Target: chr5; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 40599873 - 40599944
Alignment:
Q  36 gtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtggt 107  Q
    |||||||||||||| |||||||||||| | ||||||||||  |  |||||||||||||||||||||||||||    
T  40599873 gtttgtggtgcttcgtggtggttttcacggtggtgttgatactaggtcttttgtggtggtgctcgtggtggt 40599944  T

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Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 12156544 - 12156477
Alignment:
Q  28 ttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggt 95  Q
    |||||||||||||||||| ||| ||||||||| |||| |||||||||| ||| || ||||||||||||    
T  12156544 ttgtgttggtttgtggtggttcgtggtggtttccatggtggtgttgatattgggttttttgtggtggt 12156477  T

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Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 41355579 - 41355630
Alignment:
Q  6 tatgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggt 57  Q
    ||||| |||||||||| ||| |||||||||||||||||| ||||||||||||    
T  41355579 tatggtttcgatggatctttggttgtgttggtttgtggtacttcatggtggt 41355630  T

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Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 111
Target Start/End: Original strand, 24867069 - 24867139
Alignment:
Q  41 tggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtggttttt 111  Q
    ||||||||| ||||||||| || | || | |||||  || ||||||| |||||||||||||||||||||||    
T  24867069 tggtgcttcgtggtggtttccaagttgattttgatactgggtcttttatggtggtgctcgtggtggttttt 24867139  T

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Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 41355620 - 41355672
Alignment:
Q  59 ttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtggttttt 111  Q
    |||||| ||||| |||||||| ||||||||||| || |||||| |||||||||    
T  41355620 ttcatggtggtgctgattttgggtcttttgtggcggggctcgtagtggttttt 41355672  T

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Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 1895476 - 1895361
Alignment:
Q  6 tatgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtg 105  Q
    ||||| |||||||||| ||| |||||||||||||||||| |||||||||||||||| || |||| ||||||||| ||||||||||| || ||||||||||    
T  1895476 tatggtttcgatggatctttggttgtgttggtttgtggtacttcatggtggttttcttggtggtattgattttgggtcttttgtggcggggctcgtggtg 1895377  T
Q  106 gtttttagtgatgatg 121  Q
    |||||| ||| |||||    
T  1895376 gtttttggtggtgatg 1895361  T

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Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 34660351 - 34660247
Alignment:
Q  7 atgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtgg 106  Q
    |||| |||||||||| ||| ||||||||||||||||||||||||||| |||||||||| ||||| |||||||| || |||||||| |  |||||||||||    
T  34660351 atggtttcgatggatctttggttgtgttggtttgtggtgcttcatggcggttttcatggtggtgctgattttgggtgttttgtggcgaggctcgtggtgg 34660252  T
Q  107 ttttt 111  Q
    |||||    
T  34660251 ttttt 34660247  T

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Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 122
Target Start/End: Original strand, 17282000 - 17282117
Alignment:
Q  6 tatgggttcgatggatatttagttgtgttggttt-gtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggt 104  Q
    ||||| |||||||||| ||| ||||||||||||| ||||| |||||||||||||||| || ||||| |||||||| ||||||||||| ||  ||||||||    
T  17282000 tatggtttcgatggatctttggttgtgttggttttgtggtacttcatggtggttttcttggtggtgctgattttgggtcttttgtggcgggactcgtggt 17282099  T
Q  105 ggtttttagtgatgatgt 122  Q
    ||||||| ||| ||||||    
T  17282100 ggtttttggtggtgatgt 17282117  T

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Target: chr2; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 4869702 - 4869610
Alignment:
Q  15 gatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtggt 107  Q
    ||||||| ||| ||||| |||||||| |||||||||||| |||||||||||||||| |||||||| ||||||||||| || ||||||||||||    
T  4869702 gatggatctttggttgttttggtttgcggtgcttcatggcggttttcatgatggtgctgattttgggtcttttgtggcggggctcgtggtggt 4869610  T

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Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 3921658 - 3921543
Alignment:
Q  6 tatgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtg 105  Q
    ||||| || ||||||| ||| |||||||||||||||||| ||||| |||||||||| || ||||| |||||||| ||| ||||||| || ||||||||||    
T  3921658 tatggttttgatggatgtttggttgtgttggtttgtggtacttcacggtggttttcttggtggtgctgattttgggtcatttgtggcggggctcgtggtg 3921559  T
Q  106 gtttttagtgatgatg 121  Q
    |||||| ||| |||||    
T  3921558 gtttttggtggtgatg 3921543  T

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Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 17375347 - 17375238
Alignment:
Q  2 ctgttatgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgt 101  Q
    ||||||||| ||||||| || ||| ||||||||||||||||||||||||||   ||||||||| ||||| |||||||  ||||||||||||||  || ||    
T  17375347 ctgttatggtttcgatgaatctttggttgtgttggtttgtggtgcttcatgacagttttcatggtggtgctgattttaggtcttttgtggtgggacttgt 17375248  T
Q  102 ggtggttttt 111  Q
    ||||||||||    
T  17375247 ggtggttttt 17375238  T

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Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 1551660 - 1551758
Alignment:
Q  12 ttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtggtttt 110  Q
    |||||||||| ||| |||||||||||||||||| |||| ||||||||||| || | ||| |||||||| |||||| |||| || |||||||||||||||    
T  1551660 ttcgatggatctttggttgtgttggtttgtggtacttcgtggtggttttcttggtagtgctgattttgggtctttagtggcggggctcgtggtggtttt 1551758  T

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Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 14950310 - 14950412
Alignment:
Q  2 ctgttatgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgt 101  Q
    ||||||||| || |||| || ||| ||||||||||||||||||| ||| ||||||||| |||| || ||||||| |||||| ||||||||||||||| ||    
T  14950310 ctgttatggttttgatgaattttttgttgtgttggtttgtggtggttcgtggtggtttccatggtgatgttgatattgagttttttgtggtggtgcttgt 14950409  T
Q  102 ggt 104  Q
    |||    
T  14950410 ggt 14950412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 9910805 - 9910734
Alignment:
Q  36 gtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtggt 107  Q
    |||||||||||||| ||||||||| |||||||||||||||  || ||||||||| ||||||||| |||||||    
T  9910805 gtttgtggtgcttcgtggtggtttccatgatggtgttgatactgggtcttttgtagtggtgctcatggtggt 9910734  T

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Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 121
Target Start/End: Complemental strand, 6705679 - 6705609
Alignment:
Q  51 tggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtggtttttagtgatgatg 121  Q
    |||||||||||||| ||||| ||||  |  ||||||||||||||||||||||||||||||| ||| |||||    
T  6705679 tggtggttttcatggtggtgctgatacttggtcttttgtggtggtgctcgtggtggtttttggtggtgatg 6705609  T

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Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 40900363 - 40900294
Alignment:
Q  51 tggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtggtttttagtgatgat 120  Q
    |||||||||  ||| ||||| ||||  || |||||||||||||||||||||||||| |||| ||| ||||    
T  40900363 tggtggtttctatggtggtgctgatactgggtcttttgtggtggtgctcgtggtggcttttggtggtgat 40900294  T

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Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 3302645 - 3302536
Alignment:
Q  2 ctgttatgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgt 101  Q
    ||||||| | |||||||||| ||| ||||| ||||| ||||||||||||||   ||||||||| |||||||||||||| ||||||||||| || ||||||    
T  3302645 ctgttatagtttcgatggatctttggttgtattggtatgtggtgcttcatgacagttttcatggtggtgttgattttgggtcttttgtggcggggctcgt 3302546  T
Q  102 ggtggttttt 111  Q
    ||||||||||    
T  3302545 ggtggttttt 3302536  T

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Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 21590491 - 21590575
Alignment:
Q  27 gttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtggttttt 111  Q
    |||||||| || ||||||| ||  |||| ||||  ||| ||||| |||| ||| |||||||||||||| ||||||||||||||||    
T  21590491 gttgtgtttgtctgtggtgttttgtggtagtttctatggtggtgctgatattgggtcttttgtggtggggctcgtggtggttttt 21590575  T

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Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 23054285 - 23054394
Alignment:
Q  2 ctgttatgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgt 101  Q
    ||||||||| ||| |||||| ||| |||||||||||| ||||||||| |||| |||||||||| ||||| |||||||| ||||||||||| || ||||||    
T  23054285 ctgttatggtttcaatggatctttggttgtgttggttcgtggtgctttatggcggttttcatggtggtgctgattttgggtcttttgtggcggagctcgt 23054384  T
Q  102 ggtggttttt 111  Q
    | ||||||||    
T  23054385 gatggttttt 23054394  T

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Target: chr4; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 53202332 - 53202216
Alignment:
Q  6 tatgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtgg-tggtgctcgtggt 104  Q
    ||||| |||||||||| ||| ||||| |||||||||||| ||||||| |||||||| || |||||||||||||| |||||||||||  || |||||||||    
T  53202332 tatggtttcgatggatctttggttgtattggtttgtggtacttcatgatggttttcttggtggtgttgattttgggtcttttgtggcgggggctcgtggt 53202233  T
Q  105 ggtttttagtgatgatg 121  Q
    ||||||| ||| |||||    
T  53202232 ggtttttggtggtgatg 53202216  T

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Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 122
Target Start/End: Original strand, 47518507 - 47518623
Alignment:
Q  6 tatgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtg 105  Q
    ||||| |||||||||| ||| |||||||| ||||||||| |||||||||||||||| || || || ||||||||  |||||||||||   ||||||||||    
T  47518507 tatggtttcgatggatctttggttgtgttcgtttgtggtacttcatggtggttttcttggtgttgctgattttggatcttttgtggtaaggctcgtggtg 47518606  T
Q  106 gtttttagtgatgatgt 122  Q
    |||||| ||| ||||||    
T  47518607 gtttttggtggtgatgt 47518623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 110
Target Start/End: Original strand, 34227074 - 34227178
Alignment:
Q  6 tatgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtg 105  Q
    ||||| ||| |||||| ||| ||||||||||| |||||| ||||||||||| |||| || ||||| |||||||| |||||||||||||| || | |||||    
T  34227074 tatggtttcaatggatctttggttgtgttggtctgtggtacttcatggtggctttcttggtggtgctgattttgggtcttttgtggtggggcccatggtg 34227173  T
Q  106 gtttt 110  Q
    |||||    
T  34227174 gtttt 34227178  T

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Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 46 - 121
Target Start/End: Complemental strand, 45873285 - 45873210
Alignment:
Q  46 cttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtggtttttagtgatgatg 121  Q
    |||| |||||||||||||| ||||||| || ||| |||||||||||||||| |||||||||||||| ||| |||||    
T  45873285 cttcctggtggttttcatggtggtgttaatattgggtcttttgtggtggtgttcgtggtggtttttggtggtgatg 45873210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 111
Target Start/End: Complemental strand, 38093439 - 38093334
Alignment:
Q  6 tatgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtg 105  Q
    ||||| || ||||||| ||| |||||||||| |||||||| |||  ||||||||  ||| ||||||||||  || || |||||||||||| |||||||||    
T  38093439 tatggttttgatggatttttcgttgtgttgggttgtggtggttcgcggtggtttctatggtggtgttgatactgggttttttgtggtggtactcgtggtg 38093340  T
Q  106 gttttt 111  Q
    ||||||    
T  38093339 gttttt 38093334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 12469344 - 12469439
Alignment:
Q  12 ttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtggt 107  Q
    ||||||||||  || |||||||||||||||||| |||||||||||||  |||| ||||| ||||  |  ||||||| |||||||||| ||||||||    
T  12469344 ttcgatggatccttggttgtgttggtttgtggtccttcatggtggttaccatggtggtgctgatactaggtcttttttggtggtgcttgtggtggt 12469439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 55728882 - 55728810
Alignment:
Q  39 tgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtggttttt 111  Q
    ||||||| ||| ||||||||| |||| ||||||||||  ||| | |||||||||||||||||||||| |||||    
T  55728882 tgtggtggttcgtggtggtttccatggtggtgttgatactgaattttttgtggtggtgctcgtggtgattttt 55728810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 6410058 - 6410005
Alignment:
Q  5 ttatgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggtt 58  Q
    |||||| ||||||| || ||  ||||||||||||||||||||||||||||||||    
T  6410058 ttatggtttcgatgaatcttgggttgtgttggtttgtggtgcttcatggtggtt 6410005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Original strand, 12485485 - 12485559
Alignment:
Q  29 tgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtgg 103  Q
    ||||||||||||||||||||||||||||||  |||| |||||  |||   | ||||||| | |||||||||||||    
T  12485485 tgtgttggtttgtggtgcttcatggtggttaccatggtggtgccgatacggggtcttttatcgtggtgctcgtgg 12485559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 24957685 - 24957738
Alignment:
Q  58 tttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtggttttt 111  Q
    ||||||| ||||| ||||||||  ||||||||| |||||||||||||| |||||    
T  24957685 tttcatggtggtgctgattttggttcttttgtgatggtgctcgtggtgattttt 24957738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 7e-24; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 20740644 - 20740540
Alignment:
Q  6 tatgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtg 105  Q
    ||||| |||||||||| ||| ||||||||||||| |||| |||||||||||||||| || ||||| |||||||| |||||| |||| || ||||||||||    
T  20740644 tatggtttcgatggatctttggttgtgttggtttatggtacttcatggtggttttcttggtggtgctgattttgggtctttagtggcggggctcgtggtg 20740545  T
Q  106 gtttt 110  Q
    |||||    
T  20740544 gtttt 20740540  T

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Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 111
Target Start/End: Complemental strand, 21881533 - 21881428
Alignment:
Q  6 tatgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtg 105  Q
    ||||| ||||||| || ||| ||| |||||||||||||||||||||||  ||| ||||| ||||| |||||||| ||||||||| ||||  |||||||||    
T  21881533 tatggtttcgatgaatctttggttatgttggtttgtggtgcttcatggcagttatcatggtggtgctgattttgggtcttttgttgtgggactcgtggtg 21881434  T
Q  106 gttttt 111  Q
    ||||||    
T  21881433 gttttt 21881428  T

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Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 30845627 - 30845524
Alignment:
Q  2 ctgttatgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgt 101  Q
    ||||||||| || |||| || ||| ||||||||||||| ||||||||| ||||||||| |||| ||||| ||||  |  |||||||||||||||||||||    
T  30845627 ctgttatggttttgatgaatttttggttgtgttggtttatggtgcttcgtggtggtttccatggtggtgatgatact-tgtcttttgtggtggtgctcgt 30845529  T
Q  102 ggtgg 106  Q
    |||||    
T  30845528 ggtgg 30845524  T

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Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 34213489 - 34213552
Alignment:
Q  38 ttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgt 101  Q
    |||||||||||||    |||||||||| |||||||||||||| ||||||||||| || ||||||    
T  34213489 ttgtggtgcttcacaacggttttcatggtggtgttgattttgggtcttttgtggcggggctcgt 34213552  T

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Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 5994700 - 5994601
Alignment:
Q  2 ctgttatgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgt 101  Q
    ||||||||| || ||||||| ||| ||||||||||||||||||||||||||| ||| |||||| || ||||||||||| ||||||||||| || ||||||    
T  5994700 ctgttatggttttgatggatctttggttgtgttggtttgtggtgcttcatggcggtattcatggtgatgttgattttgggtcttttgtggcggggctcgt 5994601  T

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Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 6444105 - 6443997
Alignment:
Q  2 ctgttatgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgt 101  Q
    ||||||||| ||||| | || |||  ||||||||||||||||| |||| |||||||||||||| ||| | |||||||| ||||||||||||||||||||     
T  6444105 ctgttatggtttcgaagaatctttgattgtgttggtttgtggtacttcgtggtggttttcatggtggggctgattttgggtcttttgtggtggtgctcga 6444006  T
Q  102 ggtggtttt 110  Q
     ||||||||    
T  6444005 agtggtttt 6443997  T

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Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 10408894 - 10408786
Alignment:
Q  3 tgttatgggttcgatggatatttagttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtg 102  Q
    |||||||| ||||||| || ||| ||||||||||||||||||||||||||| |||||| ||| ||||| | ||||||  |||||||||| || |||| ||    
T  10408894 tgttatggtttcgatgaatctttggttgtgttggtttgtggtgcttcatggaggttttaatggtggtgctaattttggatcttttgtggcggggctcctg 10408795  T
Q  103 gtggttttt 111  Q
    |||||||||    
T  10408794 gtggttttt 10408786  T

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Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 15050051 - 15050141
Alignment:
Q  31 tgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtggtttttagtgatgatg 121  Q
    ||||||||||||||||||| |||||||||  ||| ||||| || |  |  ||||||||||||||||||||||||||||||| ||| |||||    
T  15050051 tgttggtttgtggtgcttcgtggtggtttcaatggtggtgctggtactaggtcttttgtggtggtgctcgtggtggtttttggtggtgatg 15050141  T

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Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 106
Target Start/End: Complemental strand, 23636018 - 23635948
Alignment:
Q  36 gtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtgg 106  Q
    |||||||||||||||||||||||| |||| ||||||||||  |  || |||||||||||||||||||||||    
T  23636018 gtttgtggtgcttcatggtggtttccatggtggtgttgatactaggttttttgtggtggtgctcgtggtgg 23635948  T

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Target: scaffold0092 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 111
Target Start/End: Complemental strand, 23364 - 23284
Alignment:
Q  31 tgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtggttttt 111  Q
    |||| |||||||||||||  ||||||||| |||| ||||| ||||  |  |||||||||||||||||||||||||||||||    
T  23364 tgttcgtttgtggtgctttgtggtggtttccatggtggtgctgatactaggtcttttgtggtggtgctcgtggtggttttt 23284  T

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Target: scaffold0044 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 42781 - 42865
Alignment:
Q  27 gttgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtggtggttttt 111  Q
    |||||||||| |||||||| |||  ||||||||  |||||| |||||||  |  || |||||||||||| |||||||||||||||    
T  42781 gttgtgttgggttgtggtggttcgcggtggtttctatgatgctgttgatactaggttttttgtggtggtactcgtggtggttttt 42865  T

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Target: scaffold0157 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 103
Target Start/End: Complemental strand, 34992 - 34918
Alignment:
Q  29 tgtgttggtttgtggtgcttcatggtggttttcatgatggtgttgattttgagtcttttgtggtggtgctcgtgg 103  Q
    ||||||||||||||||||||||||||||||  |||| |||||  |||   | ||||||| | |||||||||||||    
T  34992 tgtgttggtttgtggtgcttcatggtggttaccatggtggtgccgatacggggtcttttatcgtggtgctcgtgg 34918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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