View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0719_low_2 (Length: 681)

Name: NF0719_low_2
Description: NF0719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0719_low_2
NF0719_low_2
[»] chr7 (45 HSPs)
chr7 (448-653)||(24228933-24229138)
chr7 (87-237)||(24228386-24228536)
chr7 (262-377)||(24228752-24228866)
chr7 (90-231)||(6602338-6602479)
chr7 (90-231)||(39859209-39859350)
chr7 (90-235)||(34776895-34777040)
chr7 (87-212)||(30940402-30940527)
chr7 (87-236)||(47386186-47386335)
chr7 (87-231)||(37115503-37115647)
chr7 (87-231)||(38474120-38474264)
chr7 (90-212)||(13168142-13168267)
chr7 (90-211)||(45359359-45359480)
chr7 (105-231)||(37796176-37796302)
chr7 (145-236)||(13169683-13169774)
chr7 (87-178)||(48852324-48852415)
chr7 (108-231)||(27666063-27666186)
chr7 (108-231)||(29996512-29996635)
chr7 (87-179)||(35693347-35693441)
chr7 (145-231)||(34775001-34775087)
chr7 (87-231)||(56333-56477)
chr7 (145-237)||(48227941-48228033)
chr7 (145-235)||(39857644-39857734)
chr7 (535-639)||(24225003-24225107)
chr7 (145-235)||(6605397-6605487)
chr7 (145-231)||(22155847-22155933)
chr7 (145-231)||(22211762-22211848)
chr7 (145-231)||(37113944-37114030)
chr7 (145-237)||(27664427-27664519)
chr7 (111-231)||(13018036-13018158)
chr7 (144-231)||(37791657-37791744)
chr7 (145-231)||(24226584-24226670)
chr7 (145-231)||(35401972-35402058)
chr7 (145-231)||(35403619-35403705)
chr7 (111-224)||(33038798-33038911)
chr7 (154-231)||(46439542-46439619)
chr7 (109-212)||(20478064-20478167)
chr7 (145-231)||(78014-78100)
chr7 (145-231)||(47384297-47384383)
chr7 (105-149)||(23906256-23906300)
chr7 (144-227)||(13039641-13039724)
chr7 (111-178)||(46996703-46996770)
chr7 (145-231)||(46437110-46437196)
chr7 (122-224)||(46812594-46812696)
chr7 (145-237)||(20479719-20479811)
chr7 (110-178)||(40784402-40784470)
[»] chr4 (28 HSPs)
chr4 (87-239)||(41761723-41761875)
chr4 (90-231)||(51011929-51012070)
chr4 (87-231)||(49523127-49523271)
chr4 (87-231)||(48813790-48813934)
chr4 (87-239)||(41781534-41781686)
chr4 (87-195)||(42980674-42980782)
chr4 (87-231)||(2693230-2693373)
chr4 (90-212)||(52868129-52868251)
chr4 (87-212)||(48646724-48646849)
chr4 (90-212)||(35404425-35404547)
chr4 (87-231)||(43519427-43519571)
chr4 (145-231)||(39345567-39345653)
chr4 (106-237)||(11601668-11601798)
chr4 (145-231)||(35401752-35401838)
chr4 (154-231)||(48645258-48645335)
chr4 (145-237)||(20493824-20493916)
chr4 (144-231)||(2691377-2691463)
chr4 (144-231)||(20819988-20820075)
chr4 (145-236)||(43507165-43507256)
chr4 (119-197)||(2350516-2350594)
chr4 (145-231)||(4173740-4173826)
chr4 (145-231)||(43508653-43508739)
chr4 (154-231)||(320909-320986)
chr4 (111-224)||(44558494-44558607)
chr4 (145-231)||(319276-319362)
chr4 (188-230)||(11254123-11254165)
chr4 (145-231)||(33266010-33266096)
chr4 (163-224)||(4520471-4520532)
[»] chr1 (37 HSPs)
chr1 (87-231)||(2869582-2869726)
chr1 (90-231)||(31238475-31238616)
chr1 (90-231)||(37344345-37344486)
chr1 (87-231)||(27087286-27087430)
chr1 (91-231)||(50556078-50556218)
chr1 (90-237)||(6818658-6818805)
chr1 (90-240)||(4855946-4856096)
chr1 (87-209)||(51896129-51896251)
chr1 (90-231)||(25278348-25278489)
chr1 (90-231)||(34778118-34778259)
chr1 (87-179)||(15104496-15104588)
chr1 (87-240)||(3013447-3013606)
chr1 (87-239)||(46583533-46583685)
chr1 (87-234)||(33602621-33602768)
chr1 (136-237)||(25278979-25279080)
chr1 (145-231)||(2871076-2871162)
chr1 (145-231)||(31236822-31236908)
chr1 (145-231)||(25276745-25276831)
chr1 (145-234)||(3011855-3011944)
chr1 (87-232)||(52643597-52643737)
chr1 (145-219)||(33599233-33599307)
chr1 (145-231)||(37345962-37346048)
chr1 (154-231)||(25278857-25278934)
chr1 (154-231)||(52641891-52641968)
chr1 (109-212)||(9121667-9121770)
chr1 (111-178)||(36895511-36895578)
chr1 (145-231)||(26223590-26223676)
chr1 (145-231)||(34776572-34776658)
chr1 (145-231)||(46582013-46582099)
chr1 (158-239)||(37088149-37088230)
chr1 (111-224)||(42134492-42134605)
chr1 (97-178)||(51121961-51122042)
chr1 (145-234)||(51894567-51894656)
chr1 (147-231)||(8167945-8168029)
chr1 (117-224)||(18183950-18184057)
chr1 (145-231)||(8169568-8169654)
chr1 (111-224)||(35479976-35480089)
[»] chr2 (30 HSPs)
chr2 (87-237)||(39664745-39664895)
chr2 (90-237)||(16763073-16763220)
chr2 (87-224)||(40560233-40560370)
chr2 (87-237)||(2766931-2767081)
chr2 (87-234)||(17696206-17696353)
chr2 (90-231)||(19908246-19908388)
chr2 (89-231)||(44709744-44709886)
chr2 (87-236)||(14389081-14389230)
chr2 (87-230)||(42519202-42519346)
chr2 (90-198)||(16377197-16377305)
chr2 (87-231)||(39455172-39455316)
chr2 (87-213)||(6797528-6797654)
chr2 (87-223)||(37645498-37645634)
chr2 (145-234)||(6799408-6799497)
chr2 (154-231)||(19581417-19581494)
chr2 (145-231)||(16376739-16376825)
chr2 (98-178)||(15432384-15432464)
chr2 (154-234)||(19906682-19906762)
chr2 (109-212)||(24208061-24208164)
chr2 (145-231)||(34400317-34400403)
chr2 (111-197)||(37417310-37417396)
chr2 (145-219)||(39663169-39663243)
chr2 (145-231)||(14387352-14387438)
chr2 (145-231)||(16764611-16764697)
chr2 (111-178)||(39398-39465)
chr2 (119-178)||(92356-92415)
chr2 (109-212)||(6786000-6786103)
chr2 (111-178)||(29909661-29909728)
chr2 (145-231)||(40561878-40561964)
chr2 (190-231)||(42517561-42517602)
[»] chr5 (31 HSPs)
chr5 (90-231)||(17574321-17574462)
chr5 (87-231)||(36057590-36057734)
chr5 (87-231)||(34327638-34327782)
chr5 (90-231)||(7267846-7267987)
chr5 (90-231)||(2179790-2179931)
chr5 (90-225)||(30468260-30468395)
chr5 (87-237)||(24541188-24541339)
chr5 (91-236)||(8539673-8539818)
chr5 (87-179)||(18624985-18625077)
chr5 (145-231)||(8541271-8541357)
chr5 (145-231)||(12738736-12738822)
chr5 (145-231)||(12801559-12801645)
chr5 (145-231)||(30463903-30463989)
chr5 (87-231)||(2854304-2854447)
chr5 (145-231)||(21842992-21843078)
chr5 (145-237)||(7269446-7269538)
chr5 (145-241)||(28822090-28822186)
chr5 (109-212)||(29621780-29621883)
chr5 (143-234)||(43492131-43492222)
chr5 (112-178)||(38178095-38178161)
chr5 (112-178)||(38205319-38205385)
chr5 (154-231)||(41493847-41493924)
chr5 (104-152)||(15459183-15459231)
chr5 (145-202)||(28813765-28813822)
chr5 (128-212)||(42473625-42473709)
chr5 (111-178)||(18728603-18728670)
chr5 (145-212)||(29620160-29620227)
chr5 (111-178)||(32087570-32087637)
chr5 (145-231)||(2852889-2852975)
chr5 (111-224)||(43318061-43318174)
chr5 (145-237)||(40782211-40782303)
[»] chr3 (49 HSPs)
chr3 (90-231)||(2226152-2226293)
chr3 (90-231)||(53190759-53190900)
chr3 (87-231)||(21348726-21348870)
chr3 (87-231)||(30599915-30600059)
chr3 (87-231)||(51684613-51684757)
chr3 (90-236)||(27899081-27899227)
chr3 (87-231)||(43765140-43765284)
chr3 (90-212)||(35905712-35905834)
chr3 (105-231)||(54898440-54898566)
chr3 (87-236)||(42279505-42279654)
chr3 (87-231)||(17515313-17515457)
chr3 (90-231)||(46112490-46112631)
chr3 (90-234)||(2377029-2377173)
chr3 (87-171)||(48830803-48830887)
chr3 (87-212)||(23293167-23293292)
chr3 (106-231)||(41977753-41977878)
chr3 (87-179)||(46197775-46197867)
chr3 (87-238)||(44794204-44794354)
chr3 (87-209)||(3152215-3152337)
chr3 (145-219)||(23291585-23291659)
chr3 (108-225)||(2660221-2660338)
chr3 (87-160)||(44276193-44276266)
chr3 (90-152)||(7884873-7884935)
chr3 (154-231)||(48829359-48829436)
chr3 (87-179)||(19987591-19987683)
chr3 (145-237)||(30598334-30598426)
chr3 (145-237)||(44267978-44268070)
chr3 (145-237)||(54412547-54412639)
chr3 (145-236)||(53094273-53094364)
chr3 (145-231)||(38193510-38193596)
chr3 (145-231)||(41979352-41979438)
chr3 (145-231)||(46308810-46308896)
chr3 (145-231)||(46310436-46310522)
chr3 (145-202)||(46114105-46114162)
chr3 (145-231)||(3150255-3150341)
chr3 (145-231)||(46609152-46609238)
chr3 (145-231)||(54900074-54900160)
chr3 (154-231)||(600728-600805)
chr3 (121-224)||(2977340-2977443)
chr3 (111-178)||(48633933-48634000)
chr3 (145-231)||(7883331-7883417)
chr3 (145-231)||(38191898-38191984)
chr3 (145-231)||(53092626-53092712)
chr3 (145-231)||(53187745-53187831)
chr3 (127-224)||(23774162-23774259)
chr3 (119-192)||(33852679-33852752)
chr3 (154-231)||(51686403-51686480)
chr3 (90-134)||(600809-600853)
chr3 (145-225)||(2661908-2661988)
[»] chr8 (41 HSPs)
chr8 (87-231)||(13282481-13282625)
chr8 (90-231)||(8609787-8609928)
chr8 (87-235)||(26242311-26242459)
chr8 (90-236)||(38547226-38547372)
chr8 (87-217)||(41042581-41042711)
chr8 (87-231)||(7745109-7745253)
chr8 (87-235)||(41825641-41825789)
chr8 (90-231)||(13108336-13108477)
chr8 (87-212)||(13486096-13486221)
chr8 (87-233)||(42941775-42941921)
chr8 (87-231)||(22272337-22272483)
chr8 (87-179)||(9673162-9673254)
chr8 (108-231)||(27691157-27691280)
chr8 (87-179)||(40339677-40339769)
chr8 (87-231)||(5036448-5036596)
chr8 (145-231)||(42943426-42943512)
chr8 (154-231)||(34681075-34681152)
chr8 (145-231)||(22273891-22273977)
chr8 (154-231)||(26238729-26238806)
chr8 (145-237)||(33761066-33761158)
chr8 (145-219)||(13106819-13106893)
chr8 (145-235)||(13283995-13284085)
chr8 (145-237)||(33762713-33762805)
chr8 (145-236)||(38548831-38548922)
chr8 (145-231)||(601704-601790)
chr8 (145-231)||(5038062-5038147)
chr8 (145-231)||(27692837-27692923)
chr8 (87-179)||(33708801-33708893)
chr8 (166-225)||(13484554-13484613)
chr8 (109-212)||(15305819-15305922)
chr8 (109-212)||(15486188-15486291)
chr8 (111-178)||(33750385-33750452)
chr8 (111-178)||(37526024-37526091)
chr8 (145-231)||(29239187-29239273)
chr8 (119-197)||(31201152-31201230)
chr8 (145-231)||(35509217-35509303)
chr8 (127-224)||(462387-462484)
chr8 (119-224)||(33160157-33160262)
chr8 (187-236)||(41040718-41040767)
chr8 (154-219)||(41823905-41823970)
chr8 (128-212)||(27406935-27407019)
[»] chr6 (21 HSPs)
chr6 (87-233)||(7372935-7373081)
chr6 (87-210)||(20523390-20523513)
chr6 (90-237)||(32439071-32439218)
chr6 (87-236)||(13613559-13613708)
chr6 (87-179)||(9398715-9398807)
chr6 (87-240)||(6899479-6899632)
chr6 (87-224)||(10568409-10568546)
chr6 (90-231)||(32516880-32517021)
chr6 (87-223)||(14338452-14338588)
chr6 (90-231)||(11355225-11355366)
chr6 (87-152)||(7049839-7049904)
chr6 (145-231)||(32518497-32518583)
chr6 (154-231)||(10569928-10570005)
chr6 (109-212)||(3456770-3456873)
chr6 (165-231)||(7371178-7371244)
chr6 (145-231)||(9400035-9400121)
chr6 (145-231)||(20525334-20525420)
chr6 (145-242)||(32454240-32454337)
chr6 (97-199)||(30891159-30891261)
chr6 (154-219)||(13610705-13610770)
chr6 (154-231)||(21068628-21068705)
[»] scaffold1454 (1 HSPs)
scaffold1454 (90-234)||(1263-1407)
[»] scaffold0058 (3 HSPs)
scaffold0058 (87-231)||(3297-3441)
scaffold0058 (87-231)||(4469-4613)
scaffold0058 (145-231)||(14343-14429)
[»] scaffold0564 (1 HSPs)
scaffold0564 (90-231)||(8265-8404)
[»] scaffold0004 (1 HSPs)
scaffold0004 (145-231)||(106673-106757)
[»] scaffold0002 (1 HSPs)
scaffold0002 (158-225)||(436274-436341)


Alignment Details
Target: chr7 (Bit Score: 186; Significance: 1e-100; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 448 - 653
Target Start/End: Original strand, 24228933 - 24229138
Alignment:
Q  448 accaatcaaccaaatttcaaaatgccgatcaccctcgttgaccaaaacgacaatcccattaacatgccaatccccaacccaaatctcacaccatcaccct 547  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| | ||||||||||||||    
T  24228933 accaatcacccaaatttcaaaatgccgatcaccctcgttgaccaaaacgacaatcccatctacatgccaatccccaacccaaaccccacaccatcaccct 24229032  T
Q  548 tcaacatcaccctcttcgacaaccacctcccctacgacacccacaacacctactccatcaccatcgacaccaccctcacaatccaaaccctcctcacctg 647  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24229033 tcaacatcaccctcttcgacaaccacctcccctacgacacccacaacacctactccatcaccatcgacaccaccctcacaatccaaaccctcctcacctg 24229132  T
Q  648 ttcccc 653  Q
    ||||||    
T  24229133 ttcccc 24229138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 87 - 237
Target Start/End: Original strand, 24228386 - 24228536
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||      
T  24228386 acatcatcaccactaatggagcttttggacgaagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaattcagggacg 24228485  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatattaatcatt 237  Q
    ||||||||| |||||| |||||||||  ||||| ||||| |||||||||||    
T  24228486 aatttggccaattttttaaaattcaagaacgaaattgaggtattaatcatt 24228536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 262 - 377
Target Start/End: Original strand, 24228752 - 24228866
Alignment:
Q  262 tcagccagtcaaatgtccagaatctttagcaaacactacactattacacctcacttccgtgactaccccactcgtctcactcactcctccactcacgccc 361  Q
    ||||||| |||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24228752 tcagccaatcaaatatcca-aatctttaacaaacactacactattacacctcacttccgtgactaccccactcgtctcactcactcctccactcacgccc 24228850  T
Q  362 cgtccaccccacaata 377  Q
    ||||||||||||||||    
T  24228851 cgtccaccccacaata 24228866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 90 - 231
Target Start/End: Complemental strand, 6602479 - 6602338
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    |||||||||||||  ||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||  |||||| |    
T  6602479 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggataagt 6602380  T
Q  190 ttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    || |||||||||| ||||||||| | |||| ||||| |||||    
T  6602379 ttagccgattttttaaaattcaaggtcgaatttgagttatta 6602338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 90 - 231
Target Start/End: Original strand, 39859209 - 39859350
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    |||||||||||||  ||||||||||||| |||||||||||||| | ||||||||||||||||  ||||||||||||||||||||||||||  |||  |||    
T  39859209 tcatcaccactaacggagcttttggacggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggactaat 39859308  T
Q  190 ttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||||||||||||| ||||||||| |||||| ||||| |||||    
T  39859309 ttggccgattttttaaaattcaaggacgaatttgaggtatta 39859350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 90 - 235
Target Start/End: Original strand, 34776895 - 34777040
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    |||||| ||||||  ||| ||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||  | || |||    
T  34776895 tcatcatcactaacggagtttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaggaatgaat 34776994  T
Q  190 ttggccgatttttaaaaattcaaagacgaagttgagatattaatca 235  Q
    |||||| |||||| |||||| ||  ||||| ||||| |||||||||    
T  34776995 ttggccaattttttaaaatttaagaacgaatttgaggtattaatca 34777040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 87 - 212
Target Start/End: Original strand, 30940402 - 30940527
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    ||||||||||||||||  ||||||||||||| || |||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||    ||      
T  30940402 acatcatcaccactaacggagcttttggacggagagaccattttgatgaacgtttgtaaaattcagggactaaatagatatttcgtaaaattaagagacg 30940501  T
Q  187 aatttggccgatttttaaaaattcaa 212  Q
    |||||||||||||||| |||||||||    
T  30940502 aatttggccgattttttaaaattcaa 30940527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 87 - 236
Target Start/End: Original strand, 47386186 - 47386335
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    ||||||||||||||||  ||||||||||||| |  ||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||  |||      
T  47386186 acatcatcaccactaacggagcttttggacggaatgaccattttgatggacgtctgtaaaatttagagactaaataaatatttcgcaaaattcaaggacg 47386285  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatattaatcat 236  Q
    |||||| | ||||||| |||||| || |||||| ||||| ||||| ||||    
T  47386286 aatttgactgattttttaaaattaaaggacgaatttgaggtattagtcat 47386335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 87 - 231
Target Start/End: Original strand, 37115503 - 37115647
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    ||||||||||||||||  ||||||||||||| |||||| ||||||||| |||||||||||||||||  ||||||||||||||| |||||||||  | |      
T  37115503 acatcatcaccactaacggagcttttggacggagggactattttgatggacgtctgtaaaattcaggtactaaatagatattttgcaaaattcaggaacg 37115602  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||| | ||||||| ||||||||| |||||| ||||| |||||    
T  37115603 aatttgactgattttttaaaattcaatgacgaatttgaggtatta 37115647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 87 - 231
Target Start/End: Original strand, 38474120 - 38474264
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    ||||||||||||||||  ||||||||||||| | |||||||||||||   |||||||||||||||  ||||||||||||||||||||||||||  |||      
T  38474120 acatcatcaccactaacggagcttttggacggatggaccattttgataggcgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggacg 38474219  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||| ||||||||||||||||| | ||| || ||||| |||||    
T  38474220 aatttgaccgatttttaaaaattcgaggactaatttgaggtatta 38474264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 13168267 - 13168142
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattc---agagactaaatagatatttcgcaaaattcttggata 186  Q
    |||||||||||||  ||||||||||||| | |||||||||||||| |||||||||||||||   || ||||||||||||||||||||||||||  |||      
T  13168267 tcatcaccactaacggagcttttggacggatggaccattttgatggacgtctgtaaaattcaggagggactaaatagatatttcgcaaaattcaaggacg 13168168  T
Q  187 aatttggccgatttttaaaaattcaa 212  Q
    |||||||||||||||| |||||||||    
T  13168167 aatttggccgattttttaaaattcaa 13168142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 90 - 211
Target Start/End: Complemental strand, 45359480 - 45359359
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    |||||||||||||  ||||||||||| | |||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||  |||   ||    
T  45359480 tcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcaaggacggat 45359381  T
Q  190 ttggccgatttttaaaaattca 211  Q
    ||| ||||||||| ||||||||    
T  45359380 ttgaccgattttttaaaattca 45359359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 105 - 231
Target Start/End: Original strand, 37796176 - 37796302
Alignment:
Q  105 gagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaa 204  Q
    |||||| |||||| |||||| ||||||||| ||||| ||||||||||| |||||||||||||||||||||||||   |||  |||||||| ||||||| |    
T  37796176 gagcttatggacggagggactattttgatggacgtccgtaaaattcagggactaaatagatatttcgcaaaatttgaggacgaatttggctgatttttga 37796275  T
Q  205 aaattcaaagacgaagttgagatatta 231  Q
    |||||||| ||| || ||||| |||||    
T  37796276 aaattcaaggacaaatttgaggtatta 37796302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 145 - 236
Target Start/End: Original strand, 13169683 - 13169774
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatattaatcat 236  Q
    |||||||| ||||||||||||||||||||||||||  ||| ||||||||||||||||| ||||||||| |||||| ||||| ||||| ||||    
T  13169683 aaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtcat 13169774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 48852324 - 48852415
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaatt 178  Q
    |||||||||||||||| |||||||||||||  || ||||||||||||| ||||||||||||||||  || ||||||||||||| ||||||||    
T  48852324 acatcatcaccactaacagagcttttggaccgagagaccattttgatggacgtctgtaaaattcaaggattaaatagatattttgcaaaatt 48852415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 27666063 - 27666186
Alignment:
Q  108 cttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaa 207  Q
    |||||||||| ||||||   ||||||| |||| |||||||||||| |||||| | |||||||||||||||||  |||  || ||||||||||||| ||||    
T  27666063 cttttggacggagggacggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaa 27666162  T
Q  208 ttcaaagacgaagttgagatatta 231  Q
    ||||| |||||| ||||| |||||    
T  27666163 ttcaaggacgaatttgaggtatta 27666186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 29996512 - 29996635
Alignment:
Q  108 cttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaa 207  Q
    |||||||| | |||||| | ||||||| ||||||||||||||||| || ||| | |||||||||||||||||  ||| ||| ||| ||||||||| ||||    
T  29996512 cttttggatggagggacgaatttgatggacgtctgtaaaattcagggattaatttgatatttcgcaaaattcagggacaaaattgaccgatttttcaaaa 29996611  T
Q  208 ttcaaagacgaagttgagatatta 231  Q
    ||||| |||||| ||||| |||||    
T  29996612 ttcaaggacgaatttgaggtatta 29996635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 35693347 - 35693441
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaa--atagatatttcgcaaaattc 179  Q
    |||||||||||||||| ||| |||||||| | |||||||||||||||| ||||||||||||||||| ||||||  | ||||||| ||||||||||    
T  35693347 acatcatcaccactaacagaacttttggatggagggaccattttgatggacgtctgtaaaattcagggactaattagagatattccgcaaaattc 35693441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 34775087 - 34775001
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||||||| ||||| ||||||||| || || |||||| ||||||||| |||||||||||||||| |||||||||||    
T  34775087 aaattcagggactaaatagctattttgcaaaattcatgaatgaatttgaccgattttttaaaattcaaagacgaatttgagatatta 34775001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 87 - 231
Target Start/End: Complemental strand, 56477 - 56333
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    |||||||||| ||||| |||  ||||||||| |||||     |||||| ||||||||||||||||| |||||| | |||||||||||||||||  |||      
T  56477 acatcatcactactaacagacattttggacggagggagtgaattgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 56378  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    || || |||||||||| ||||||||| |||||| ||||| |||||    
T  56377 aaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 56333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 145 - 237
Target Start/End: Original strand, 48227941 - 48228033
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatattaatcatt 237  Q
    |||||||| ||| ||||||||||||||||||||||   ||  |||||| ||||||||| |||||||||||||||| ||||| |||||||||||    
T  48227941 aaattcagggacaaaatagatatttcgcaaaattcaaagacgaatttgaccgattttttaaaattcaaagacgaatttgaggtattaatcatt 48228033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 145 - 235
Target Start/End: Complemental strand, 39857734 - 39857644
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatattaatca 235  Q
    |||||| | ||||||||||||||||||||||||||  |||  |||||| ||||||||| ||||||||| |||||| ||||| |||||||||    
T  39857734 aaattctgggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattaatca 39857644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 535 - 639
Target Start/End: Complemental strand, 24225107 - 24225003
Alignment:
Q  535 acaccatcacccttcaacatcaccctcttcgacaaccacctcccctacgacacccacaacacctactccatcaccatcgacaccaccctcacaatccaaa 634  Q
    |||||| | ||| |||| |||||| || |||||||| |||||||  |||| |||||| ||||||||||||||||| ||||| ||||| |||||||||||     
T  24225107 acaccaactcccatcaaaatcaccatcatcgacaacaacctccctcacgatacccacgacacctactccatcaccttcgactccaccttcacaatccaat 24225008  T
Q  635 ccctc 639  Q
    |||||    
T  24225007 ccctc 24225003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 145 - 235
Target Start/End: Original strand, 6605397 - 6605487
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatattaatca 235  Q
    |||||||| |||||||||| |||||||||||||||  | | ||||||| ||||||||| ||||||||| ||| || ||||| |||||||||    
T  6605397 aaattcagggactaaatagctatttcgcaaaattcaggaacaaatttgaccgattttttaaaattcaaggacaaatttgaggtattaatca 6605487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 22155847 - 22155933
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| ||| |||||| ||||| ||||||||| ||||  |||||||||||||||| ||||||||| ||||||||| || |||||    
T  22155847 aaattcagggacaaaatagctattttgcaaaattcatggacgaatttggccgatttttgaaaattcaaggacgaagtttaggtatta 22155933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 22211762 - 22211848
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| ||| |||||| ||||| ||||||||| ||||  |||||||||||||||| ||||||||| ||||||||| || |||||    
T  22211762 aaattcagggacaaaatagctattttgcaaaattcatggacgaatttggccgatttttgaaaattcaaggacgaagtttaggtatta 22211848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 37114030 - 37113944
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||||| || ||||||||||||||||||||||||||  |||| |||||| || |||||| ||||||||| |||||| ||||| |||||    
T  37114030 aaatttagggactaaatagatatttcgcaaaattcagggatgaatttgaccaattttttaaaattcaaggacgaatttgaggtatta 37113944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 237
Target Start/End: Complemental strand, 27664519 - 27664427
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatattaatcatt 237  Q
    |||||||| |||||| | ||||||| |||||||||  ||| ||| ||||||||||||| ||||||||| ||| || ||||| |||||||||||    
T  27664519 aaattcagggactaatttgatattttgcaaaattcagggacaaaattggccgatttttcaaaattcaaggactaatttgaggtattaatcatt 27664427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 231
Target Start/End: Complemental strand, 13018158 - 13018036
Alignment:
Q  111 ttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatag--atatttcgcaaaattcttggataaatttggccgatttttaaaaat 208  Q
    ||||||| |||||||||||||||| |||| ||| |||||||||||  ||||||  ||||||||| |||||   |||  |||||||| ||||||| |||||    
T  13018158 ttggacggagggaccattttgatggacgtatgttaaattcagagatgaaatagatatatttcgctaaatttgaggacgaatttggctgattttttaaaat 13018059  T
Q  209 tcaaagacgaagttgagatatta 231  Q
    |||| || ||| ||||| |||||    
T  13018058 tcaaggatgaatttgaggtatta 13018036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 231
Target Start/End: Complemental strand, 37791744 - 37791657
Alignment:
Q  144 aaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||| || |||||||||||||||| ||||||||   |||| |||||||| ||||||| |||||| |||||||||||| || |||||    
T  37791744 aaaatttagggactaaatagatatttggcaaaatttggggatgaatttggctgattttttaaaatttaaagacgaagtttaggtatta 37791657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 24226670 - 24226584
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||  ||| |||||| |||||||||||||||  |||  |||||||||||||||| ||||||||| |||||| ||||| |||||    
T  24226670 aaattcaaggacaaaatagctatttcgcaaaattcaaggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtatta 24226584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 35402058 - 35401972
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||| | |||||||||||||||||  |||  || || |||||||||| ||||||||| |||||| |||||||||||    
T  35402058 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgatttttcaaaattcaaggacgaatttgagatatta 35401972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 35403619 - 35403705
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||| | |||||||||||||||||  |||  || ||||||||||||| ||||||||| |||||| ||||| |||||    
T  35403619 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgattttttaaaattcaaggacgaatttgaggtatta 35403705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 111 - 224
Target Start/End: Original strand, 33038798 - 33038911
Alignment:
Q  111 ttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattc 210  Q
    ||||||| ||||||| |||||||| ||||||| ||||||||| |||||| | ||||||||||| ||||   |||| |||||| ||||    |||||||||    
T  33038798 ttggacggagggacctttttgatggacgtctgaaaaattcagggactaagttgatatttcgcataattgagggatgaatttgaccgacccataaaaattc 33038897  T
Q  211 aaagacgaagttga 224  Q
    || |||||| ||||    
T  33038898 aaggacgaatttga 33038911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 46439542 - 46439619
Alignment:
Q  154 gactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||||||||||||||||||||    || || ||||  |||||||||||||||||| |||||| |||||||||||    
T  46439542 gactaaatagatatttcgcaaaatttaaagacaagtttgatcgatttttaaaaattcaatgacgaatttgagatatta 46439619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 109 - 212
Target Start/End: Complemental strand, 20478167 - 20478064
Alignment:
Q  109 ttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaat 208  Q
    ||||||||| ||||||   ||||||| ||||||| ||||||||| |||||| | ||||||||| |||||||  | |  || ||||||||||||| |||||    
T  20478167 ttttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcaggtacgaaattggccgatttttcaaaat 20478068  T
Q  209 tcaa 212  Q
    ||||    
T  20478067 tcaa 20478064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 78014 - 78100
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| ||| || | ||||||| |||||||||  |||  || ||||||||||||| |||||||||||||||| ||||| |||||    
T  78014 aaattcagggacaaatttgatattttgcaaaattcagggacgaaattggccgatttttcaaaattcaaagacgaatttgaggtatta 78100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 47384383 - 47384297
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||| | |||||| |||||||||||||||||||  |||  ||||||||  |||||| ||||||||| |||||| ||||| |||||    
T  47384383 aaattcggggactaattagatatttcgcaaaattcaaggacgaatttggctcatttttcaaaattcaaggacgaatttgaggtatta 47384297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 149
Target Start/End: Original strand, 23906256 - 23906300
Alignment:
Q  105 gagcttttggacgaagggaccattttgatgaacgtctgtaaaatt 149  Q
    ||||||||||||| |||||||||||||||| ||| ||||||||||    
T  23906256 gagcttttggacggagggaccattttgatggacgactgtaaaatt 23906300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 227
Target Start/End: Original strand, 13039641 - 13039724
Alignment:
Q  144 aaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagat 227  Q
    ||||||||| |||||||||| ||||||||||||||   |||  ||||||   ||||||| ||||||||| |||||| |||||||    
T  13039641 aaaattcagggactaaatagttatttcgcaaaatttagggacgaatttgattgatttttgaaaattcaaggacgaacttgagat 13039724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 46996703 - 46996770
Alignment:
Q  111 ttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaatt 178  Q
    ||||||| ||||||| |||||||| |||||||  |||||||| |||||| | ||||||||||| ||||    
T  46996703 ttggacggagggacctttttgatggacgtctgacaaattcagtgactaagttgatatttcgcataatt 46996770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 46437196 - 46437110
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||  ||| |||||| |||||||||||||||   ||  |||||||| ||||||| ||||||||| |||||| ||||| |||||    
T  46437196 aaattcaaggacaaaatagctatttcgcaaaattcaacgacgaatttggctgatttttgaaaattcaaggacgaatttgaggtatta 46437110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 122 - 224
Target Start/End: Original strand, 46812594 - 46812696
Alignment:
Q  122 gaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagt 221  Q
    |||| |||||||| |||||||  ||||| || |||||||| |||||||| |  ||||   |||| ||||||||||| |  ||||||||||| ||||||||    
T  46812594 gacctttttgatggacgtctgacaaatttagggactaaattgatatttcacgtaattgagggatgaatttggccgactcgtaaaaattcaaggacgaagt 46812693  T
Q  222 tga 224  Q
    |||    
T  46812694 tga 46812696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 145 - 237
Target Start/End: Original strand, 20479719 - 20479811
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatattaatcatt 237  Q
    |||||||| |||||| | ||||||||| |||||||  |||  || ||||||||||||| ||||||||| ||| |  ||||| ||||| |||||    
T  20479719 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtcatt 20479811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 110 - 178
Target Start/End: Complemental strand, 40784470 - 40784402
Alignment:
Q  110 tttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaatt 178  Q
    |||||||| ||||||| |||||||| | |||||  ||||||| ||||||| | ||||||||||| ||||    
T  40784470 tttggacggagggacctttttgatggatgtctgacaaattcaaagactaagttgatatttcgcataatt 40784402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 6e-45; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 87 - 239
Target Start/End: Original strand, 41761723 - 41761875
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    ||||||||||||||||   |||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||   |||      
T  41761723 acatcatcaccactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaatttcgggacg 41761822  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatattaatcattat 239  Q
    |||||||||||||||| ||||||||| |||||| ||||| |||||||||||||    
T  41761823 aatttggccgatttttgaaaattcaaggacgaatttgaggtattaatcattat 41761875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 90 - 231
Target Start/End: Complemental strand, 51012070 - 51011929
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  | |  |||    
T  51012070 tcatcactactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaattcaagaaagaat 51011971  T
Q  190 ttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||| ||||||||| ||||||||| |||||| |||||||||||    
T  51011970 ttgaccgattttttaaaattcaaggacgaatttgagatatta 51011929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 87 - 231
Target Start/End: Complemental strand, 49523271 - 49523127
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    ||||||||||||||||  ||  ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||      
T  49523271 acatcatcaccactaacggattttttggacggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcatggacg 49523172  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||||| |||||||||| ||||||||| |||||| ||||| |||||    
T  49523171 aatttagccgattttttaaaattcaatgacgaatttgaggtatta 49523127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 87 - 231
Target Start/End: Complemental strand, 48813934 - 48813790
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||| |||||| ||||||||||  |||||||| |||||| |||||||||  |||||    
T  48813934 acatcatcaccaccaacagagcttttggacgaagggaccattttgatggacgtctataaaattcaggaactaaatatatattttgcaaaattcagggata 48813835  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| ||||||| ||||||||| |||||| ||||| |||||    
T  48813834 aatttggctgatttttgaaaattcaaggacgaatttgaggtatta 48813790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 87 - 239
Target Start/End: Complemental strand, 41781686 - 41781534
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    ||||||||| ||||||  ||||||||||||| |||||||||||||||| | ||||||||||||||| ||||||||| |||||| |||||||||  ||| |    
T  41781686 acatcatcatcactaacggagcttttggacggagggaccattttgatggatgtctgtaaaattcagggactaaataaatattttgcaaaattcagggaca 41781587  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatattaatcattat 239  Q
    |||||| ||||||||| |||||||||  || || ||||| ||||| |||||||    
T  41781586 aatttgaccgattttttaaaattcaagaacaaatttgaggtattagtcattat 41781534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 87 - 195
Target Start/End: Complemental strand, 42980782 - 42980674
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||| || ||||||||||| |||||| ||||||| |||| |    
T  42980782 acatcatcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattaagggactaaatagaaatttcgtaaaattcatggaca 42980683  T
Q  187 aatttggcc 195  Q
    |||||||||    
T  42980682 aatttggcc 42980674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 87 - 231
Target Start/End: Original strand, 2693230 - 2693373
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    ||||||||| ||||||| || ||| |||||| | |||||||||||||| || | | ||||||||| ||||||||||||||||||||||||||   | |||    
T  2693230 acatcatcatcactaatggaacttatggacggatggaccattttgatggacattt-taaaattcaaagactaaatagatatttcgcaaaatttaggaata 2693328  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| ||||||| |||||||||||||||||||||| |||||    
T  2693329 aatttggctgattttttaaaattcaaagacgaagttgaggtatta 2693373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 52868129 - 52868251
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    ||||| |||||||  |||||||||||||||| ||||||||||||   ||||||| ||||||||||||||||||||||||||||||||||  | ||  |||    
T  52868129 tcatcgccactaacggagcttttggacgaagtgaccattttgataggcgtctgttaaattcagagactaaatagatatttcgcaaaatttatagacgaat 52868228  T
Q  190 ttggccgatttttaaaaattcaa 212  Q
    ||| ||||||||| |||||||||    
T  52868229 ttgaccgattttttaaaattcaa 52868251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 87 - 212
Target Start/End: Original strand, 48646724 - 48646849
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    ||||||||||||||||   |||||||||||| | |||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||  |||      
T  48646724 acatcatcaccactaacgaagcttttggacggaaggaccattttgatgaaggtctgtaaaattcagggactaaatagatatttcgctaaattcaaggacg 48646823  T
Q  187 aatttggccgatttttaaaaattcaa 212  Q
    ||||| || || |||| |||||||||    
T  48646824 aatttagctgacttttgaaaattcaa 48646849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 35404425 - 35404547
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    |||||||||||||  ||||||||||||| | ||||||||||| || ||||||||||||||||| || |||||| |||||||||||||||   |||  |||    
T  35404425 tcatcaccactaacggagcttttggacggatggaccattttgttggacgtctgtaaaattcagggattaaataaatatttcgcaaaattgaaggacgaat 35404524  T
Q  190 ttggccgatttttaaaaattcaa 212  Q
    || |||||||||| |||||||||    
T  35404525 ttagccgattttttaaaattcaa 35404547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 87 - 231
Target Start/End: Complemental strand, 43519571 - 43519427
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    |||||||||| | |||| || |||||||||| ||||||   ||||||| |||| |||||||||||| |||||| | |||||||||||||||||  |||      
T  43519571 acatcatcactattaatggaccttttggacggagggacggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 43519472  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    || ||||||||||||| ||||||||| |||||| ||||| |||||    
T  43519471 aaattggccgatttttcaaaattcaaggacgaatttgaggtatta 43519427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 39345653 - 39345567
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||||||| |||||||||||||||  |||  |||||||||||||||| ||||||||| |||||| |||| ||||||    
T  39345653 aaattcagggactaaatagctatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaaatatta 39345567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 237
Target Start/End: Complemental strand, 11601798 - 11601668
Alignment:
Q  106 agcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaa 205  Q
    ||||| |||||  |||||| ||||||||| ||||||||||||||||| |||| |||| |||||| ||||||||   ||||||||||| | ||||||| ||    
T  11601798 agcttgtggacagagggactattttgatggacgtctgtaaaattcagggact-aatatatattttgcaaaatttggggataaatttgactgatttttgaa 11601700  T
Q  206 aattcaaagacgaagttgagatattaatcatt 237  Q
    |||||||  ||||| || || ||||| |||||    
T  11601699 aattcaagaacgaattttaggtattactcatt 11601668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 35401838 - 35401752
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||  ||||||||||||||||| ||||||||  |||  |||||||||||||||| ||||||||| |||||| ||||| |||||    
T  35401838 aaattcaaggactaaatagatatttcacaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatta 35401752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 48645335 - 48645258
Alignment:
Q  154 gactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||||||||||||||||||||| ||||  |||||| | ||||||| ||||||||| |||||| ||||| |||||    
T  48645335 gactaaatagatatttcgcaaaattcatggacgaatttgactgatttttgaaaattcaaggacgaatttgaggtatta 48645258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 237
Target Start/End: Complemental strand, 20493916 - 20493824
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatattaatcatt 237  Q
    ||||||||  |||||||||||||||||||||||||  | |  |||||||||||| ||| ||||||||| |||||| ||||| ||||| |||||    
T  20493916 aaattcaggaactaaatagatatttcgcaaaattcaagaacgaatttggccgatattttaaaattcaatgacgaatttgaggtattagtcatt 20493824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 231
Target Start/End: Complemental strand, 2691463 - 2691377
Alignment:
Q  144 aaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||||||||| |||||||||||||||| ||||||||  ||||  |||||||| ||||||| ||||||| |||| ||||||||| |||||    
T  2691463 aaaattcagggactaaatagatattttgcaaaatttgtggacgaatttggctgatttttgaaaattc-aagatgaagttgaggtatta 2691377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 231
Target Start/End: Complemental strand, 20820075 - 20819988
Alignment:
Q  144 aaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||||||||| ||||||||| |||||| ||||||||   | ||||||||| | ||||||| ||||||||| |||||||||||| |||||    
T  20820075 aaaattcagggactaaataaatattttgcaaaatttaggaataaatttgactgatttttgaaaattcaaggacgaagttgaggtatta 20819988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 236
Target Start/End: Complemental strand, 43507256 - 43507165
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatattaatcat 236  Q
    |||||||| |||||| | |||||||||||||||||  |||  || ||||||||||||| ||||||||| |||||| ||||| ||||| ||||    
T  43507256 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcat 43507165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 197
Target Start/End: Original strand, 2350516 - 2350594
Alignment:
Q  119 agggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccga 197  Q
    ||||||| ||||||||||||||||  ||||||||||| ||||| ||||||||||| ||||   ||| ||||||||||||    
T  2350516 agggacctttttgatgaacgtctgataaattcagagattaaattgatatttcgcataattgagggacaaatttggccga 2350594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 4173740 - 4173826
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||| | |||||||||||||||||  |||  || ||||||||||||| ||||||||| |||||| ||||| |||||    
T  4173740 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 4173826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 43508653 - 43508739
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||| | |||||||||||||||||  |||  || ||||||||||||| ||||||||| |||||| ||||| |||||    
T  43508653 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 43508739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 320909 - 320986
Alignment:
Q  154 gactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||| | |||||||||||||||||  |||| || ||||||||||||| ||||||||| |||||| ||||| |||||    
T  320909 gactaatttgatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 320986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 224
Target Start/End: Original strand, 44558494 - 44558607
Alignment:
Q  111 ttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattc 210  Q
    ||||||| | ||||| |||||||| |||||||  |||||||| |||||| | ||||||||||| ||||   |||| |||||||||||    | |||||||    
T  44558494 ttggacggaaggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgtgaaaattc 44558593  T
Q  211 aaagacgaagttga 224  Q
    || |||||||||||    
T  44558594 aaggacgaagttga 44558607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 319362 - 319276
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||||||||  ||||| | |||||||||||||||||  |||  || ||| ||||||||| ||||||||| |||||| ||||| |||||    
T  319362 aaattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 319276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 188 - 230
Target Start/End: Complemental strand, 11254165 - 11254123
Alignment:
Q  188 atttggccgatttttaaaaattcaaagacgaagttgagatatt 230  Q
    ||||||||||||||||||||||||| |||||| ||||| ||||    
T  11254165 atttggccgatttttaaaaattcaaggacgaatttgaggtatt 11254123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 33266010 - 33266096
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||| | |||||||||||||||||  | |  || || |||||||||| |||||||||  ||||| |||||||||||    
T  33266010 aaattcagggactaatttgatatttcgcaaaattcaggaacgaaattagccgatttttcaaaattcaagaacgaatttgagatatta 33266096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 4520471 - 4520532
Alignment:
Q  163 gatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttga 224  Q
    ||||||||||| ||||  ||||| ||||||||||| |  ||||||||||| |||||||||||    
T  4520471 gatatttcgcataattgatggatgaatttggccgactcataaaaattcaaggacgaagttga 4520532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 6e-45; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 87 - 231
Target Start/End: Complemental strand, 2869726 - 2869582
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||  |||      
T  2869726 acatcatcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaatttagagactaaatagatatttcgcaaaattcagggacg 2869627  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||| ||||||||| ||||||||| |||||| ||||| |||||    
T  2869626 aatttgaccgatttttgaaaattcaaggacgaatttgaggtatta 2869582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 90 - 231
Target Start/End: Original strand, 31238475 - 31238616
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    |||||||||||||  ||||||||||||  | |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||  ||| ||||    
T  31238475 tcatcaccactaacggagcttttggacagatggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacaaat 31238574  T
Q  190 ttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||||||||||||| ||||||||| ||| || ||||| |||||    
T  31238575 ttggccgattttttaaaattcaaggacaaatttgaggtatta 31238616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 90 - 231
Target Start/End: Complemental strand, 37344486 - 37344345
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    |||||||||||||  ||||||||||||| |||||||||||||||| |||| ||||||||||| ||||||||||| |||||||||||||||  |||  |||    
T  37344486 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaagactaaataggtatttcgcaaaattcagggacgaat 37344387  T
Q  190 ttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||| ||||||||| ||||||||| |||||| ||||| |||||    
T  37344386 ttgaccgattttttaaaattcaaggacgaatttgaggtatta 37344345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 87 - 231
Target Start/End: Complemental strand, 27087430 - 27087286
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    ||||||||||||||||  ||||||||||||| | || ||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||  ||| |    
T  27087430 acatcatcaccactaacggagcttttggacggatgggccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggaca 27087331  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||| ||||||||| |||||| || |||||| ||||| |||||    
T  27087330 aatttgaccgattttttaaaatttaaggacgaatttgaggtatta 27087286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 91 - 231
Target Start/End: Original strand, 50556078 - 50556218
Alignment:
Q  91 catcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatt 190  Q
    ||||||||||||  ||||||||||||| |||||||||||||||  |||||||||||||| || ||||||||||||||||||||||||||   ||  ||||    
T  50556078 catcaccactaacggagcttttggacggagggaccattttgatagacgtctgtaaaatttagggactaaatagatatttcgcaaaattcagagacgaatt 50556177  T
Q  191 tggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    || | ||||||| |||||||||||||||| |||||||||||    
T  50556178 tgactgattttttaaaattcaaagacgaatttgagatatta 50556218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 90 - 237
Target Start/End: Original strand, 6818658 - 6818805
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    |||||||||||||  ||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||| || |||| |  |||  | |    
T  6818658 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgctaaatccagggacgagt 6818757  T
Q  190 ttggccgatttttaaaaattcaaagacgaagttgagatattaatcatt 237  Q
    ||||||||||||| ||||||||| |||||| ||||| ||||| |||||    
T  6818758 ttggccgattttttaaaattcaaggacgaatttgaggtattagtcatt 6818805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 90 - 240
Target Start/End: Original strand, 4855946 - 4856096
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    ||||||||| |||  ||||||||||||| |||||||||||||||| ||||||||||||||||| |||||| | |||||||||||||||||  |||   ||    
T  4855946 tcatcaccattaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtat 4856045  T
Q  190 ttggccgatttttaaaaattcaaagacgaagttgagatattaatcattata 240  Q
    ||||||||||||| ||||||||| |||||| ||||| ||||| ||| ||||    
T  4856046 ttggccgattttttaaaattcaaggacgaatttgaggtattagtcaatata 4856096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 87 - 209
Target Start/End: Original strand, 51896129 - 51896251
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    |||||||||||||||| |||||||||||||| |||||| ||||||||| || |||||||||||||| ||||||||||||||||||||||||||  ||| |    
T  51896129 acatcatcaccactaacagagcttttggacggagggactattttgatggacatctgtaaaattcagggactaaatagatatttcgcaaaattcagggaca 51896228  T
Q  187 aatttggccgatttttaaaaatt 209  Q
    |||||| | ||||||| ||||||    
T  51896229 aatttgactgattttttaaaatt 51896251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 90 - 231
Target Start/End: Original strand, 25278348 - 25278489
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    |||||||||||||  ||||||||||||| |||||||||||||||| |||| |||||||||||  |||||||||| |||||||||||||||  |||  |||    
T  25278348 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaggactaaataggtatttcgcaaaattcagggacgaat 25278447  T
Q  190 ttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||| ||||||||| ||||||||| |||||| ||||| |||||    
T  25278448 ttgaccgattttttaaaattcaaggacgaatttgaggtatta 25278489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 90 - 231
Target Start/End: Original strand, 34778118 - 34778259
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    |||||||||||||  ||||||||||||| |||||||||||||||| || |||||||||||||| |||||| | |||||||||||||||||  |||   ||    
T  34778118 tcatcaccactaacggagcttttggacggagggaccattttgatggacatctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtat 34778217  T
Q  190 ttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||||||||||||| ||||||||| |||||| ||||| |||||    
T  34778218 ttggccgattttttaaaattcaaggacgaatttgaggtatta 34778259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 87 - 179
Target Start/End: Complemental strand, 15104588 - 15104496
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattc 179  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  15104588 acatcatcaccactaatggagcttttggacggaaggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattc 15104496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 87 - 240
Target Start/End: Original strand, 3013447 - 3013606
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatga------acgtctgtaaaattcagagactaaatagatatttcgcaaaattct 180  Q
    ||||||||||||||||  ||||||||||||| |||||| |||||||||       ||||||||||||||||| ||||||||||||||||||||||||||     
T  3013447 acatcatcaccactaacggagcttttggacggagggactattttgatgtccatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattca 3013546  T
Q  181 tggataaatttggccgatttttaaaaattcaaagacgaagttgagatattaatcattata 240  Q
    ||||  |||||| | ||| ||| ||||||||| |||||| ||||| ||||| ||||||||    
T  3013547 tggacgaatttgactgatgttttaaaattcaaggacgaatttgaggtattagtcattata 3013606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 87 - 239
Target Start/End: Original strand, 46583533 - 46583685
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    |||||||||||| |||  || |||||||||| |||||| | ||||||| ||||||||||||||||| |||||| | |||||||||||||||||  ||| |    
T  46583533 acatcatcaccattaacggaccttttggacggagggacaaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggaca 46583632  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatattaatcattat 239  Q
    || ||| ||||||||| ||||||||| |||||| ||||| ||||| |||||||    
T  46583633 aaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtcattat 46583685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 87 - 234
Target Start/End: Original strand, 33602621 - 33602768
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    |||||||||  |||||  || |||||||||| |||||| | ||||| | ||||||||||||||||| |||||| | |||||||| ||||||||  |||      
T  33602621 acatcatcattactaacggaccttttggacggagggactaatttgacggacgtctgtaaaattcagggactaatttgatatttcacaaaattcagggacg 33602720  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatattaatc 234  Q
    || ||| ||||||||| ||||||||| |||||| ||||| ||||||||    
T  33602721 aaattgaccgatttttcaaaattcaaggacgaatttgaggtattaatc 33602768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 136 - 237
Target Start/End: Original strand, 25278979 - 25279080
Alignment:
Q  136 acgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatattaatca 235  Q
    ||||||||||||||||| |||||||||||||||||||||||||   | |  |||||||| ||||||| ||||||||| |||||| ||||| ||||| |||    
T  25278979 acgtctgtaaaattcagggactaaatagatatttcgcaaaatttaggaacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtca 25279078  T
Q  236 tt 237  Q
    ||    
T  25279079 tt 25279080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 2871076 - 2871162
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||||||| |||| |||||| |||||||||||||||  |||  ||||| |||||||||||||||||||| |||||| |||||||||||    
T  2871076 aaattcaaagacaaaatagctatttcgcaaaattcagggacgaatttagccgatttttaaaaattcaaggacgaatttgagatatta 2871162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 31236908 - 31236822
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||||||||  |||||||||||||||||||||||||  ||| ||||||| ||||||||| ||||||||| |||||| ||||| |||||    
T  31236908 aaattcaggaactaaatagatatttcgcaaaattcagggacaaatttgaccgattttttaaaattcaaggacgaatttgaggtatta 31236822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 25276831 - 25276745
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||| | |||||||||||||||||  |||| || ||||||||||||| ||||||||| |||||| ||||| |||||    
T  25276831 aaattcagggactaatttgatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 25276745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 3011944 - 3011855
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatattaatc 234  Q
    |||||||||||||||||||||||||||||||||||  | |  |||||| | ||||||| |||||| || |||||| ||||| ||||||||    
T  3011944 aaattcagagactaaatagatatttcgcaaaattcaggaacgaatttgactgattttttaaaatttaaggacgaatttgaggtattaatc 3011855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 232
Target Start/End: Original strand, 52643597 - 52643737
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    ||||||||||||||||  ||||||||||||| || |||||| |      |||| | |||||||||| ||||||||| ||||||||||||||||  |||      
T  52643597 acatcatcaccactaacggagcttttggacggagagaccatctg-----acgtttataaaattcagggactaaataaatatttcgcaaaattcagggacg 52643691  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatattaa 232  Q
    |||||  | |||||||||||||| || |||||| ||||| ||||||    
T  52643692 aatttaactgatttttaaaaatttaaggacgaatttgaggtattaa 52643737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 33599307 - 33599233
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaa 219  Q
    ||||||||||| ||| | ||||||||||||||||| ||||  |||||| ||||||||| ||||||||| ||||||    
T  33599307 aaattcagagattaatttgatatttcgcaaaattcatggacgaatttgaccgatttttcaaaattcaaggacgaa 33599233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 37345962 - 37346048
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||| | |||||||||||||||||  |||| || |||| |||||||| ||||||||| |||||| ||||| |||||    
T  37345962 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggtcgatttttcaaaattcaaggacgaatttgaggtatta 37346048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 25278934 - 25278857
Alignment:
Q  154 gactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||||||||||||||||||||||||||  ||| ||||||| | ||||||| ||||||||| || ||| ||||| |||||    
T  25278934 gactaaatagatatttcgcaaaattcagggacaaatttgactgatttttgaaaattcaaggatgaatttgaggtatta 25278857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 52641968 - 52641891
Alignment:
Q  154 gactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||||||||| ||||||||||||||||  |||  |||||||| ||||||| ||||||||| |||||| ||||| |||||    
T  52641968 gactaaatatatatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtatta 52641891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 109 - 212
Target Start/End: Original strand, 9121667 - 9121770
Alignment:
Q  109 ttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaat 208  Q
    ||||||||| ||||||   ||||||| ||||||| ||||||||| |||||| | ||||||||| ||||||   |||  || ||||||||||||| |||||    
T  9121667 ttttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaatttagggacgaaattggccgatttttcaaaat 9121766  T
Q  209 tcaa 212  Q
    ||||    
T  9121767 tcaa 9121770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 36895511 - 36895578
Alignment:
Q  111 ttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaatt 178  Q
    ||||||||||||||| |||||||| |||||||  |||||||| |||||| | ||||||||||| ||||    
T  36895511 ttggacgaagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataatt 36895578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 26223676 - 26223590
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||| | |||||||||||||||||  |||  || ||| ||||||||| ||||||||| |||||| ||||| |||||    
T  26223676 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 26223590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 34776658 - 34776572
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||| | ||||||||| |||||||  |||  || ||||||||||||| ||||||||| |||||| ||||| |||||    
T  34776658 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 34776572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 46582099 - 46582013
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||| | |||||||||||||||||  |||  || ||||||||||||| ||||||||| ||| || ||||| |||||    
T  46582099 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacaaatttgaggtatta 46582013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 37088149 - 37088230
Alignment:
Q  158 aaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatattaatcattat 239  Q
    |||||| |||||||||||||||  | |  |||||||||||||||| ||||||||| || ||| ||||| ||||| |||||||    
T  37088149 aaatagctatttcgcaaaattcaggaacgaatttggccgattttttaaaattcaaggaagaatttgaggtattagtcattat 37088230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 224
Target Start/End: Complemental strand, 42134605 - 42134492
Alignment:
Q  111 ttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattc 210  Q
    ||||||| ||||||| |||||||| |||||||  |||||||| |||||| | ||||||||||| ||||   |||| | |||||||||    |||||||||    
T  42134605 ttggacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgacccgtaaaaattc 42134506  T
Q  211 aaagacgaagttga 224  Q
    || |||||| ||||    
T  42134505 aaggacgaatttga 42134492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 178
Target Start/End: Complemental strand, 51122042 - 51121961
Alignment:
Q  97 cactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaatt 178  Q
    |||||| ||| |||||||||| |||||||||||||||| ||||  |  |||||||| ||| |||| ||||||| ||||||||    
T  51122042 cactaacagaccttttggacggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaatt 51121961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 51894656 - 51894567
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatattaatc 234  Q
    |||||||| ||||||||| ||||||||||||||||   || ||||||| || |||||| |||||||||  ||||| ||||  ||||||||    
T  51894656 aaattcagggactaaatatatatttcgcaaaattcagagacaaatttgacccattttttaaaattcaagaacgaatttgatgtattaatc 51894567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 8168029 - 8167945
Alignment:
Q  147 attcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||| |||||| | |||||||||||||||||   ||  || ||||||||||||| ||||||||| |||||| ||||| |||||    
T  8168029 attcagggactaatttgatatttcgcaaaattcagagacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 8167945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 224
Target Start/End: Original strand, 18183950 - 18184057
Alignment:
Q  117 gaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagac 216  Q
    ||||||||  |||||||| |||||||  |||||||| |||||| | ||||||||||| ||||   |||| | |||||||||    |||||||||||||||    
T  18183950 gaagggacatttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgaaccgtaaaaattcaaagac 18184049  T
Q  217 gaagttga 224  Q
    ||| ||||    
T  18184050 gaatttga 18184057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 8169568 - 8169654
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||| | ||||||| | |||||||  |||  || ||||||||||||| ||||||||| |||||| ||||| |||||    
T  8169568 aaattcagggactaatttgatattttgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 8169654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 224
Target Start/End: Original strand, 35479976 - 35480089
Alignment:
Q  111 ttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattc 210  Q
    ||||||| | ||||| |||||||| |||||||  ||||||| ||| ||| | ||||||||||| ||||   |||| |||||||| |||   | |||||||    
T  35479976 ttggacggaaggacctttttgatggacgtctgacaaattcatagattaagttgatatttcgcataattgagggatgaatttggctgatccgtgaaaattc 35480075  T
Q  211 aaagacgaagttga 224  Q
    || |||||||||||    
T  35480076 aaggacgaagttga 35480089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 1e-43; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 87 - 237
Target Start/End: Original strand, 39664745 - 39664895
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    ||||||||||||||||  ||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||  |||      
T  39664745 acatcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgtaaaattcggggacg 39664844  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatattaatcatt 237  Q
    |||||||||||||||| ||||||||| |||||| ||||| ||||| |||||    
T  39664845 aatttggccgattttttaaaattcaaggacgaatttgaggtattagtcatt 39664895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 90 - 237
Target Start/End: Complemental strand, 16763220 - 16763073
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    ||||| ||||||| |||| ||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||  |||  |||    
T  16763220 tcatcgccactaacagagattttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 16763121  T
Q  190 ttggccgatttttaaaaattcaaagacgaagttgagatattaatcatt 237  Q
    ||| ||||||||||||||||||| |||||| ||||| ||||| |||||    
T  16763120 ttgaccgatttttaaaaattcaaggacgaatttgaggtattagtcatt 16763073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 87 - 224
Target Start/End: Complemental strand, 40560370 - 40560233
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    |||||||||||||||| ||| |||||||||| |||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||  |||      
T  40560370 acatcatcaccactaacagaacttttggacggagggactattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacg 40560271  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttga 224  Q
    |||||||| ||||||| |||||||||||||||| ||||    
T  40560270 aatttggctgattttttaaaattcaaagacgaatttga 40560233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 87 - 237
Target Start/End: Complemental strand, 2767081 - 2766931
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||  |||      
T  2767081 acatcatcaccactaacggagcttttggacagagggaccattttgatagacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacg 2766982  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatattaatcatt 237  Q
    | |||| ||||||||||||||||||| |||||| ||||| ||||| |||||    
T  2766981 agtttgaccgatttttaaaaattcaaggacgaatttgagctattagtcatt 2766931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 87 - 234
Target Start/End: Complemental strand, 17696353 - 17696206
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    ||||||||||||||||  ||||||||||||| || ||||||||||||  |||| |||||||||||| ||||||||||||||||  ||||||||  ||||     
T  17696353 acatcatcaccactaacggagcttttggacggagtgaccattttgattgacgtttgtaaaattcagggactaaatagatattttccaaaattcagggatg 17696254  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatattaatc 234  Q
    |||||||||||||||| ||||||||| |||||| ||||| ||||||||    
T  17696253 aatttggccgatttttgaaaattcaaggacgaatttgaggtattaatc 17696206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 90 - 231
Target Start/End: Original strand, 19908246 - 19908388
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    |||||||||||||  ||||||||||||| |||||||||||||| | ||||||||||||||||  ||||||||||||||||||||||||||  |||  |||    
T  19908246 tcatcaccactaacggagcttttggacggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggactaat 19908345  T
Q  190 ttggccga-tttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| ||||| ||||||||| |||||| ||||| |||||    
T  19908346 ttggccgatttttttaaaattcaaggacgaatttgaggtatta 19908388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 89 - 231
Target Start/End: Original strand, 44709744 - 44709886
Alignment:
Q  89 atcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaa 188  Q
    ||||||||||||||   |||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||  ||   ||    
T  44709744 atcatcaccactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagttatttcgcaaaattcagggccgaa 44709843  T
Q  189 tttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| ||||| ||||||||| |||||| ||||| |||||    
T  44709844 tttggccggttttttaaaattcaaggacgaatttgaggtatta 44709886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 87 - 236
Target Start/End: Original strand, 14389081 - 14389230
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    |||||||||| |||||   | |||||||||| |||||||||||||||| || | || ||||||||| ||||||||||||||||||||||||||  |||      
T  14389081 acatcatcactactaacgaaacttttggacggagggaccattttgatggacatttggaaaattcagggactaaatagatatttcgcaaaattcagggacg 14389180  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatattaatcat 236  Q
    |||||||||||||||| ||||||||| |||||| ||||| ||||| ||||    
T  14389181 aatttggccgatttttgaaaattcaatgacgaatttgaggtattagtcat 14389230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 87 - 230
Target Start/End: Original strand, 42519202 - 42519346
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgc-aaaattcttggat 185  Q
    ||||||||||||||||  ||||||||||| | |||||||||||||||| ||||||||||||||||| |||||||||||||||| || |||||||  |||     
T  42519202 acatcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaaattcaaggac 42519301  T
Q  186 aaatttggccgatttttaaaaattcaaagacgaagttgagatatt 230  Q
     ||||||  | |||||| ||||||||| |||||| ||||| ||||    
T  42519302 taatttgatcaattttttaaaattcaaggacgaatttgaggtatt 42519346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 90 - 198
Target Start/End: Original strand, 16377197 - 16377305
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    |||||||||||||  ||||||||||||| |||||||||||||||| |||| |||||||||||  |||||||||||||||| |||||||||  ||| ||||    
T  16377197 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtatgtaaaattcaaggactaaatagatattttgcaaaattcagggacaaat 16377296  T
Q  190 ttggccgat 198  Q
    ||| |||||    
T  16377297 ttgaccgat 16377305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 87 - 231
Target Start/End: Complemental strand, 39455316 - 39455172
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    |||||||| |||||||  ||||||||| ||| || ||||||||||||| ||||||||||||||||  |||||||||||||||| |||||||||  |  |     
T  39455316 acatcatcgccactaacggagcttttgaacggagagaccattttgatggacgtctgtaaaattcatggactaaatagatattttgcaaaattcaggactg 39455217  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||  ||||||||| ||||||||| ||| || |||||||||||    
T  39455216 aatttaaccgattttttaaaattcaaggacaaatttgagatatta 39455172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 87 - 213
Target Start/End: Complemental strand, 6797654 - 6797528
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    |||||||||||  ||| |||||||||||||| ||| |||||||||||  |||||||||||||| || ||||||||||||||||||||||||||  | |      
T  6797654 acatcatcacccgtaacagagcttttggacggaggaaccattttgatagacgtctgtaaaattaagggactaaatagatatttcgcaaaattcaggaacg 6797555  T
Q  187 aatttggccgatttttaaaaattcaaa 213  Q
    ||||| ||| |||||| ||||||||||    
T  6797554 aatttagccaattttttaaaattcaaa 6797528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 87 - 223
Target Start/End: Complemental strand, 37645634 - 37645498
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    ||||||||| || ||| ||||||| |||||| |||||| |||||||| ||| |||| ||||||||  |||||||||||||||||  ||||||   |||      
T  37645634 acatcatcatcaataacagagcttatggacggagggacaattttgataaacatctgcaaaattcaaggactaaatagatatttcctaaaatttaaggacg 37645535  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttg 223  Q
    |||| | | ||||||||||||||||| ||||||||||    
T  37645534 aattcgactgatttttaaaaattcaaggacgaagttg 37645498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 6799408 - 6799497
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatattaatc 234  Q
    |||||||  ||| |||||| ||||| ||||||||| ||||  |||||| ||||||||||||||||||| |||||| ||||||||||||||    
T  6799408 aaattcaaggacaaaatagctatttggcaaaattcatggacgaatttgtccgatttttaaaaattcaaggacgaatttgagatattaatc 6799497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 19581494 - 19581417
Alignment:
Q  154 gactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||||||||||||||||||||||||||  ||| ||||||||| |||||||||||||| || |||||| ||||| |||||    
T  19581494 gactaaatagatatttcgcaaaattcagggacaaatttggctgatttttaaaaatttaaggacgaatttgaggtatta 19581417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 16376825 - 16376739
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||||||| ||||||| |||||||  |||  |||||| ||||||||| |||||||||||||||| ||||| |||||    
T  16376825 aaattcagggactaaatagctatttcgtaaaattcagggacgaatttgaccgattttttaaaattcaaagacgaatttgaggtatta 16376739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 98 - 178
Target Start/End: Complemental strand, 15432464 - 15432384
Alignment:
Q  98 actaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaatt 178  Q
    |||||||||||  ||||||||| | ||| |||||||| |||||||  ||||||||||||||||| ||||||||||| ||||    
T  15432464 actaatagagcacttggacgaatgaacctttttgatggacgtctgacaaattcagagactaaattgatatttcgcataatt 15432384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 19906762 - 19906682
Alignment:
Q  154 gactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatattaatc 234  Q
    ||||||||||||||||||||||||||  |||  |||||| ||||||||| ||||||||| |||||| || || ||||||||    
T  19906762 gactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttaaggtattaatc 19906682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 212
Target Start/End: Original strand, 24208061 - 24208164
Alignment:
Q  109 ttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaat 208  Q
    ||||||||| ||||||   ||||||| ||||||||||||||||| |||||| | ||||||||| | |||||  |||  || ||||||||||||| |||||    
T  24208061 ttttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaat 24208160  T
Q  209 tcaa 212  Q
    ||||    
T  24208161 tcaa 24208164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 34400403 - 34400317
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||  ||| |||||| |||||||||||||||  |||| |||||||||||||||| ||||||||| || ||| ||||| |||||    
T  34400403 aaattcaaggacaaaatagctatttcgcaaaattcagggatgaatttggccgatttttgaaaattcaaggatgaatttgaggtatta 34400317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 197
Target Start/End: Complemental strand, 37417396 - 37417310
Alignment:
Q  111 ttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccga 197  Q
    ||||||||||||||| |||||||| |||||||  |||||||| |||||| | ||||||||||| ||||   |||| |||||||||||    
T  37417396 ttggacgaagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccga 37417310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 39663243 - 39663169
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaa 219  Q
    |||||||| |||||||||| ||||| |||||||||  |||  |||||| ||||||||||||||||||| ||||||    
T  39663243 aaattcagggactaaatagctattttgcaaaattcagggacgaatttgaccgatttttaaaaattcaaggacgaa 39663169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 14387438 - 14387352
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||| | ||||||||| |||||||  |||  || ||||||||||||| ||||||||| |||||| ||||| |||||    
T  14387438 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 14387352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 16764611 - 16764697
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||| | |||||||||||||||||  |||  || ||||||||||| | ||||||||| |||||| ||||| |||||    
T  16764611 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttctcaaaattcaaggacgaatttgaggtatta 16764697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 39398 - 39465
Alignment:
Q  111 ttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaatt 178  Q
    |||||||  |||||| ||||||||||||||||  |||||||| |||||| | ||||||||||| ||||    
T  39398 ttggacggggggacctttttgatgaacgtctgacaaattcagggactaagttgatatttcgcataatt 39465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 178
Target Start/End: Original strand, 92356 - 92415
Alignment:
Q  119 agggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaatt 178  Q
    ||||||| ||||||||||||||||  ||||||| ||||||| | ||||||||||| ||||    
T  92356 agggacctttttgatgaacgtctgacaaattcaaagactaagttgatatttcgcataatt 92415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 212
Target Start/End: Original strand, 6786000 - 6786103
Alignment:
Q  109 ttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaat 208  Q
    ||||||||| ||||||   ||||||| ||||||||||||||||| |||||| | ||||||||  | ||||   |||  || ||||||||||||| |||||    
T  6786000 ttttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattaagggacgaaattggccgatttttcaaaat 6786099  T
Q  209 tcaa 212  Q
    ||||    
T  6786100 tcaa 6786103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 29909661 - 29909728
Alignment:
Q  111 ttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaatt 178  Q
    ||||||| ||||||| |||||||| |||||||  ||||| || |||||||| ||||||||||| ||||    
T  29909661 ttggacggagggacctttttgatggacgtctgacaaattaagggactaaattgatatttcgcataatt 29909728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 40561878 - 40561964
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||| | | |||||| ||||||||   ||  || ||||||||||||| |||||||||||||||| ||||| |||||    
T  40561878 aaattcagggactaatttgctatttcacaaaattcagagacgaaattggccgatttttcaaaattcaaagacgaatttgaggtatta 40561964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 42517602 - 42517561
Alignment:
Q  190 ttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||||||||||||||||||||||| |||||| ||||| |||||    
T  42517602 ttggccgatttttaaaaattcaaggacgaatttgaggtatta 42517561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 4e-43; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 90 - 231
Target Start/End: Complemental strand, 17574462 - 17574321
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    |||||||||||||  ||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||  |||  |||    
T  17574462 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 17574363  T
Q  190 ttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||||||||||||| ||||||||| |||||| ||||| |||||    
T  17574362 ttggccgattttttaaaattcaaggacgaatttgaggtatta 17574321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 87 - 231
Target Start/End: Original strand, 36057590 - 36057734
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    |||||||||||| |||  ||||||||||||| |||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||  |||      
T  36057590 acatcatcaccattaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggtctaaatagatatttcgcaaaattcagggacg 36057689  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||||||||||| ||||||||| |||||| ||||| |||||    
T  36057690 aatttggccgatttttgaaaattcaaggacgaatttgaggtatta 36057734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 87 - 231
Target Start/End: Complemental strand, 34327782 - 34327638
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    |||||||||||||||| |||||||||||||| || ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||   ||      
T  34327782 acatcatcaccactaacagagcttttggacggagagaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagcgacg 34327683  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||||||||| |||||  ||||||||| |||||| ||||| |||||    
T  34327682 aatttggccaattttagaaaattcaaggacgaatttgaggtatta 34327638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 90 - 231
Target Start/End: Complemental strand, 7267987 - 7267846
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    |||||||||||||  ||||||||||||| ||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||   ||  |||    
T  7267987 tcatcaccactaacggagcttttggacggagggatcattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagtgacgaat 7267888  T
Q  190 ttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||| |||||||| ||||||||| |||||| ||||| |||||    
T  7267887 ttggacgattttttaaaattcaaggacgaatttgaggtatta 7267846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 90 - 231
Target Start/End: Complemental strand, 2179931 - 2179790
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    |||||||||||||| ||||||||||||| |||||||||||||||| | ||||||||||||||| || |||||||||||||| ||||||||  |||  |||    
T  2179931 tcatcaccactaatggagcttttggacggagggaccattttgatggatgtctgtaaaattcagggattaaatagatatttcacaaaattcagggacgaat 2179832  T
Q  190 ttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||| ||||||||| ||||||||| ||| || ||||| |||||    
T  2179831 ttgaccgattttttaaaattcaaggacaaatttgaggtatta 2179790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 90 - 225
Target Start/End: Original strand, 30468260 - 30468395
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    |||||||||||||  ||||||||||||| |||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||    ||  |||    
T  30468260 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattgagagacgaat 30468359  T
Q  190 ttggccgatttttaaaaattcaaagacgaagttgag 225  Q
    ||| || |||||| ||||||||| |||||| |||||    
T  30468360 ttgaccaattttttaaaattcaaggacgaaattgag 30468395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 87 - 237
Target Start/End: Original strand, 24541188 - 24541339
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagg-gaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggat 185  Q
    |||||||||| | ||||||| |||||||||| ||| ||  | ||||||| ||||||||||||||||| |||||| | |||||||||||||||||  |||     
T  24541188 acatcatcactattaatagaccttttggacggaggagatgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggac 24541287  T
Q  186 aaatttggccgatttttaaaaattcaaagacgaagttgagatattaatcatt 237  Q
     || ||||||||||||| ||||||||| |||||| ||||| ||||| |||||    
T  24541288 gaaattggccgatttttcaaaattcaatgacgaatttgaggtattagtcatt 24541339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 91 - 236
Target Start/End: Complemental strand, 8539818 - 8539673
Alignment:
Q  91 catcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatt 190  Q
    ||||| ||||||  ||||||||||| | || ||| ||||||||| |||| |||||||||||| ||||||||||||||||||||||||||  | |  ||||    
T  8539818 catcaacactaacggagcttttggatggagcgactattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcaagaacgaatt 8539719  T
Q  191 tggccgatttttaaaaattcaaagacgaagttgagatattaatcat 236  Q
    ||   ||||||| ||||||||| |||||| ||||| ||||| ||||    
T  8539718 tgattgatttttcaaaattcaaggacgaatttgaggtattagtcat 8539673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 18624985 - 18625077
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattc 179  Q
    |||||||||| |||||  ||||||||||||| | |||||||||||||| |||  |||||||||||| ||||||||||||||||| ||||||||    
T  18624985 acatcatcactactaacggagcttttggacggaaggaccattttgatggacgagtgtaaaattcagggactaaatagatatttcacaaaattc 18625077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 8541271 - 8541357
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||  ||||||||||||||||||||||||||  |||  |||||||||||||||| ||||||||| |||||| ||||| |||||    
T  8541271 aaattcaaggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaatgacgaatttgaggtatta 8541357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 12738736 - 12738822
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| ||||||||||||||||||||||||||  | |  |||||||||||||||| ||||||||| |||||| ||||| |||||    
T  12738736 aaattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaaggacgaatttgaggtatta 12738822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 12801559 - 12801645
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| ||||||||||||||||||||||||||  | |  |||||||||||||||| ||||||||| |||||| ||||| |||||    
T  12801559 aaattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaaggacgaatttgaggtatta 12801645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 30463989 - 30463903
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| ||||||||||||||||||||||||||  |||  |||||| ||||||||| ||||||||| |||||| ||||| |||||    
T  30463989 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtatta 30463903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 87 - 231
Target Start/End: Original strand, 2854304 - 2854447
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    |||||||||| | |||| || |||||||||| |||||| | |||| || ||||||||||||||||| |||||| | ||| ||||| |||||||  |||      
T  2854304 acatcatcactattaatggaccttttggacggagggacgaatttgttggacgtctgtaaaattcagggactaatttgat-tttcgaaaaattcagggacg 2854402  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    || ||| ||||||||| ||||||||| |||||| ||||| |||||    
T  2854403 aaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 2854447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 21842992 - 21843078
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||| | ||||||||||||||||| |||| ||| ||| ||||||||| ||||||||| |||||| ||||| |||||    
T  21842992 aaattcagggactaatttgatatttcgcaaaattcatggacaaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 21843078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 237
Target Start/End: Original strand, 7269446 - 7269538
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatattaatcatt 237  Q
    |||||||| |||||| | |||||||||||||||||  |||  || || |||||||||| |||||||||||||||| ||||| ||||| |||||    
T  7269446 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgattttttaaaattcaaagacgaatttgaggtattagtcatt 7269538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 241
Target Start/End: Original strand, 28822090 - 28822186
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatattaatcattatat 241  Q
    |||||||  ||| ||||||  ||||||||||||||  |||  |||||| || |||||||||||||||| |||||| ||||| |||||||||||||||    
T  28822090 aaattcaaggacaaaatagcaatttcgcaaaattcagggacgaatttgacctatttttaaaaattcaaggacgaatttgaggtattaatcattatat 28822186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 212
Target Start/End: Original strand, 29621780 - 29621883
Alignment:
Q  109 ttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaat 208  Q
    ||||||||| ||||||   ||||||| ||||||| ||||||||| |||||| | ||||||||| |||||||  |||  || ||||||||||||| |||||    
T  29621780 ttttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaat 29621879  T
Q  209 tcaa 212  Q
    ||||    
T  29621880 tcaa 29621883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 43492131 - 43492222
Alignment:
Q  143 taaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatattaatc 234  Q
    |||||||||| ||||||||||||||||||||||||||  |||| || ||||| ||||||| |||||| ||  ||||| ||||  ||||||||    
T  43492131 taaaattcagggactaaatagatatttcgcaaaattcagggatgaacttggctgatttttgaaaatttaagtacgaatttgatttattaatc 43492222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 38178095 - 38178161
Alignment:
Q  112 tggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaatt 178  Q
    |||||||||||||| |||||||| |||||||  ||||||||| ||||||| ||||||||||| ||||    
T  38178095 tggacgaagggacctttttgatggacgtctgacaaattcagatactaaattgatatttcgcataatt 38178161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 38205319 - 38205385
Alignment:
Q  112 tggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaatt 178  Q
    |||||||||||||| |||||||| |||||||  ||||||||| ||||||| ||||||||||| ||||    
T  38205319 tggacgaagggacctttttgatggacgtctgacaaattcagatactaaattgatatttcgcataatt 38205385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 41493924 - 41493847
Alignment:
Q  154 gactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||||||||||||||||| |||||||   |||  |||||||| ||||||| ||||||||| |||||||||||| |||||    
T  41493924 gactaaatagatatttcacaaaatttgaggacgaatttggctgatttttgaaaattcaaggacgaagttgaggtatta 41493847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 15459183 - 15459231
Alignment:
Q  104 agagcttttggacgaagggaccattttgatgaacgtctgtaaaattcag 152  Q
    ||||| ||||||||||||||||||||||||| |||||||| ||||||||    
T  15459183 agagcatttggacgaagggaccattttgatggacgtctgttaaattcag 15459231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 28813765 - 28813822
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgattttt 202  Q
    |||||||| ||||||||||||||||||||||||||  |||  ||||||||| ||||||    
T  28813765 aaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggccaattttt 28813822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 212
Target Start/End: Original strand, 42473625 - 42473709
Alignment:
Q  128 tttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaa 212  Q
    ||||||| ||||||||||||||||| |||||  | ||||||||| | |||||  |||  || ||||||||||||| |||||||||    
T  42473625 tttgatggacgtctgtaaaattcagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaa 42473709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 18728603 - 18728670
Alignment:
Q  111 ttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaatt 178  Q
    ||||||| ||||||| |||||||| |||||||  |||||||| |||||| | ||||||||||| ||||    
T  18728603 ttggacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataatt 18728670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 29620227 - 29620160
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaa 212  Q
    ||||||||||||||| | ||||||||| |||||||  |||  || ||||||||||||| |||||||||    
T  29620227 aaattcagagactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaa 29620160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 32087637 - 32087570
Alignment:
Q  111 ttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaatt 178  Q
    ||||||| ||||||| |||||||| ||||||| |||||| || |||||| | ||||||||||| ||||    
T  32087637 ttggacggagggacctttttgatggacgtctgaaaaattaagggactaagttgatatttcgcataatt 32087570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 2852975 - 2852889
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||||||||  ||||| | |||||||||||||||||  |||  || ||| ||||||||| ||||||||| |||||| ||||| |||||    
T  2852975 aaattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgattttttaaaattcaaggacgaatttgaggtatta 2852889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 224
Target Start/End: Original strand, 43318061 - 43318174
Alignment:
Q  111 ttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattc 210  Q
    ||||||| ||||||| |||| ||| |||||||  |||||||| |||||| | ||||||||||| ||||   |||| | |||||||||    |||||||||    
T  43318061 ttggacggagggaccttttttatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgacccataaaaattc 43318160  T
Q  211 aaagacgaagttga 224  Q
    || |||||| ||||    
T  43318161 aaggacgaatttga 43318174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 145 - 237
Target Start/End: Original strand, 40782211 - 40782303
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatattaatcatt 237  Q
    |||||||| |||||| | ||||||||| |||||||  |||  || ||||||||||||| ||||||||| ||| |  ||||| ||||| |||||    
T  40782211 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtcatt 40782303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 4e-43; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 90 - 231
Target Start/End: Original strand, 2226152 - 2226293
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    ||||||||||||| |||| ||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||  |||    
T  2226152 tcatcaccactaacagagtttttggacggagggaacattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 2226251  T
Q  190 ttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||||||||||||| ||||||||| |||||| ||||| |||||    
T  2226252 ttggccgattttttaaaattcaaggacgaatttgaggtatta 2226293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 90 - 231
Target Start/End: Original strand, 53190759 - 53190900
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    |||||||||||||  ||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||  |||  |||    
T  53190759 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 53190858  T
Q  190 ttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||||||||||||| ||||||||| |||||| ||||| |||||    
T  53190859 ttggccgattttttaaaattcaaggacgaatttgaggtatta 53190900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 87 - 231
Target Start/End: Complemental strand, 21348870 - 21348726
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    |||| ||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||  |||      
T  21348870 acattatcaccactaacagagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacg 21348771  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||||||||||| ||||||||| ||| || ||||| |||||    
T  21348770 aatttggccgattttttaaaattcaaggacaaatttgaggtatta 21348726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 87 - 231
Target Start/End: Original strand, 30599915 - 30600059
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||  |||||| |||||||||| ||||||||||||||||||||||||||  ||| |    
T  30599915 acatcatcaccactaacagagcttttggacggagggaccattttgatcgacgtctctaaaattcagggactaaatagatatttcgcaaaattcagggaca 30600014  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||||||||| |||||||| || |||||| ||||| |||||    
T  30600015 aatttggccgatttgtaaaaatttaaggacgaatttgaggtatta 30600059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 87 - 231
Target Start/End: Complemental strand, 51684757 - 51684613
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    ||||||||||||||||  ||||||||||||| |||||||||||||||| ||||||||||||||||  |||||||||||||||| |||||||||  ||||     
T  51684757 acatcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatattttgcaaaattcagggatg 51684658  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| ||||||| ||||||||| |||||| |||||||||||    
T  51684657 aatttggctgatttttgaaaattcaaggacgaatttgagatatta 51684613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 90 - 236
Target Start/End: Original strand, 27899081 - 27899227
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    |||||||||||||  ||||||||||||| |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||  |||  |||    
T  27899081 tcatcaccactaacggagcttttggacggagggaccatttttatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaat 27899180  T
Q  190 ttggccgatttttaaaaattcaaagacgaagttgagatattaatcat 236  Q
    ||||||||||||| ||||||||| |||||| ||||| ||||| ||||    
T  27899181 ttggccgattttttaaaattcaaggacgaatttgaggtattagtcat 27899227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 87 - 231
Target Start/End: Complemental strand, 43765284 - 43765140
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    ||||||||||||||||  ||||||||||| | |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||  | |      
T  43765284 acatcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagaaactaaatagatatttcgcaaaattccggaacg 43765185  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||| ||||||||| ||||||||| |||||| ||||| |||||    
T  43765184 aatttgaccgatttttgaaaattcaaggacgaatttgaggtatta 43765140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 35905712 - 35905834
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    ||||||||||||   ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||  |||    
T  35905712 tcatcaccactaccggagcttttggacggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 35905811  T
Q  190 ttggccgatttttaaaaattcaa 212  Q
    ||| ||||||||| |||||||||    
T  35905812 ttgaccgattttttaaaattcaa 35905834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 105 - 231
Target Start/End: Complemental strand, 54898566 - 54898440
Alignment:
Q  105 gagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaa 204  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||  |||||| ||||||||| |    
T  54898566 gagcttttggacggagagaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgatttttta 54898467  T
Q  205 aaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||| ||||| |||||    
T  54898466 aaattcaaggacgaatttgaggtatta 54898440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 42279654 - 42279505
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||  ||||||||||||||||| |||||||||||||||| ||||||||||  ||      
T  42279654 acatcatcaccactaacagagcttttggacggagggaccattttgatagacgtctgtaaaattcagggactaaatagatattttgcaaaattctgagacg 42279555  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatattaatcat 236  Q
    ||||  || ||||||| ||||||||| |||||| ||||| ||||| ||||    
T  42279554 aattgagctgatttttgaaaattcaatgacgaatttgaggtattactcat 42279505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 87 - 231
Target Start/End: Complemental strand, 17515457 - 17515313
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    ||||||||||||||||  | | ||||||||  |||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||   |||     
T  17515457 acatcatcaccactaacggtgattttggacagagggaccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagcgatg 17515358  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||||||||| |||||||||||||||| || ||| ||||| |||||    
T  17515357 aatttggccaatttttaaaaattcaaggaagaatttgaggtatta 17515313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 90 - 231
Target Start/End: Complemental strand, 46112631 - 46112490
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    ||||||||||||| | |||||||| ||| |||||||||||||||| ||||||||||||||||  |||||||||||||||| |||||||||    |  |||    
T  46112631 tcatcaccactaacatagcttttgaacggagggaccattttgatggacgtctgtaaaattcatggactaaatagatattttgcaaaattcaataacgaat 46112532  T
Q  190 ttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||||||||||||| ||||||||| |||||| ||||| |||||    
T  46112531 ttggccgattttttaaaattcaaggacgaatttgaggtatta 46112490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 90 - 234
Target Start/End: Complemental strand, 2377173 - 2377029
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    |||||||||||||  |||||||| |||| ||| |||||||||||| ||||||||||||||||||||||||||| || ||| |||||||||  |||  |||    
T  2377173 tcatcaccactaacggagcttttagacggaggaaccattttgatggacgtctgtaaaattcagagactaaatatattttttgcaaaattcagggacgaat 2377074  T
Q  190 ttggccgatttttaaaaattcaaagacgaagttgagatattaatc 234  Q
    |||| | |||||| |||||||||| ||||| ||||| ||||||||    
T  2377073 ttggtcaatttttgaaaattcaaaaacgaatttgaggtattaatc 2377029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 87 - 171
Target Start/End: Original strand, 48830803 - 48830887
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcg 171  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||| |||||||||| |||||||||||||||||||    
T  48830803 acatcatcaccactaacagagcttttggacggagggaccattttgatggacgtccgtaaaattcaaagactaaatagatatttcg 48830887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 87 - 212
Target Start/End: Original strand, 23293167 - 23293292
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    ||||||||||||||||  ||||||||||||| |||||| ||||||||| |||| |||||||||||  ||||||||||||||||||||||||||  ||       
T  23293167 acatcatcaccactaacggagcttttggacggagggactattttgatggacgtttgtaaaattcatggactaaatagatatttcgcaaaattcaagggcg 23293266  T
Q  187 aatttggccgatttttaaaaattcaa 212  Q
    |||||||| |||||||  ||||||||    
T  23293267 aatttggctgatttttcgaaattcaa 23293292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 106 - 231
Target Start/End: Complemental strand, 41977878 - 41977753
Alignment:
Q  106 agcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaa 205  Q
    |||||||||||| |||||||||||||| | ||||||||||||||||| |||||| | |||||||||| ||||||  |||   ||||||||||||||| ||    
T  41977878 agcttttggacggagggaccattttgacggacgtctgtaaaattcagggactaatttgatatttcgccaaattcagggacgtatttggccgattttttaa 41977779  T
Q  206 aattcaaagacgaagttgagatatta 231  Q
    ||||||| |||||| ||||| |||||    
T  41977778 aattcaaggacgaatttgaggtatta 41977753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 87 - 179
Target Start/End: Complemental strand, 46197867 - 46197775
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattc 179  Q
    ||||||||| ||||||  || ||||||||||||||||||||||| ||| |||||||||||||||||  ||||||||||||||| |||||||||    
T  46197867 acatcatcatcactaacggaacttttggacgaagggaccattttaatggacgtctgtaaaattcaggaactaaatagatattttgcaaaattc 46197775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 44794354 - 44794204
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    |||||||||| | |||  || |||||||||| |||||| | ||||||| || |||| ||||||||| |||||| | |||||||||||||||||  ||||     
T  44794354 acatcatcactattaacggaccttttggacggagggacgaatttgatggacttctgcaaaattcagggactaatttgatatttcgcaaaattcagggatg 44794255  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatattaatcatta 238  Q
    || |||||||| |||| ||||||||| |||||| ||||| ||||| ||||||    
T  44794254 aaattggccga-ttttcaaaattcaaggacgaatttgaggtattagtcatta 44794204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 87 - 209
Target Start/End: Original strand, 3152215 - 3152337
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    |||||||||| | |||  || |||||||||| ||||||   ||||||| ||||||||||||||||| |||||| | |||||||||||||||||  ||||     
T  3152215 acatcatcactattaacggaccttttggacggagggacggatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggatg 3152314  T
Q  187 aatttggccgatttttaaaaatt 209  Q
    || ||||||||||||| ||||||    
T  3152315 aaattggccgatttttcaaaatt 3152337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 23291659 - 23291585
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaa 219  Q
    |||||||||||||||||||||||||||||||||||  |||  |||||||||||||||| ||||||||| ||||||    
T  23291659 aaattcagagactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaa 23291585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 2660338 - 2660221
Alignment:
Q  108 cttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaa 207  Q
    |||||||||| |||||| | ||||||| ||||||||||||||||  |||||| | |||||||||||||||||  |||  || |||| |||||||| ||||    
T  2660338 cttttggacggagggacgaatttgatggacgtctgtaaaattcaaggactaatttgatatttcgcaaaattcagggacgaaattggtcgatttttcaaaa 2660239  T
Q  208 ttcaaagacgaagttgag 225  Q
    ||||| |||||| |||||    
T  2660238 ttcaaggacgaatttgag 2660221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 44276193 - 44276266
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaa 160  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||  |||||||||||||||  |||||||    
T  44276193 acatcatcaccactaacagagcttttggacggagggaccattttgatgggcgtctgtaaaattcaaggactaaa 44276266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 7884873 - 7884935
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcag 152  Q
    |||||||||||||  || |||||||||| |||||||||||||||| |||||||||||||||||    
T  7884873 tcatcaccactaacggaacttttggacggagggaccattttgatggacgtctgtaaaattcag 7884935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 48829436 - 48829359
Alignment:
Q  154 gactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||||||||||||||||||||||||||  | ||||||||||| || |||| ||||||||| |||||| ||||| |||||    
T  48829436 gactaaatagatatttcgcaaaattcaggaataaatttggctgaattttgaaaattcaaggacgaatttgaggtatta 48829359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 19987591 - 19987683
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattc 179  Q
    |||||||||| ||||| ||| |||||||||| ||||||   ||||||| |||| ||||||||| || |||||| | |||||||||||||||||    
T  19987591 acatcatcactactaacagaccttttggacggagggactgatttgatggacgtgtgtaaaatttagggactaatttgatatttcgcaaaattc 19987683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 237
Target Start/End: Complemental strand, 30598426 - 30598334
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatattaatcatt 237  Q
    |||||||  ||| |||||| |||||||||||||||  ||| ||||||| ||||||||| ||||||||| |||||| ||||| ||||| |||||    
T  30598426 aaattcaaggacaaaatagctatttcgcaaaattcagggacaaatttgaccgatttttgaaaattcaaggacgaatttgaggtattagtcatt 30598334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 237
Target Start/End: Complemental strand, 44268070 - 44267978
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatattaatcatt 237  Q
    |||||||  ||| |||||| |||||||||||||||   ||| |||||||||||||||| ||||||||| |||||| ||||| ||||| |||||    
T  44268070 aaattcaaggacaaaatagctatttcgcaaaattcagagatgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtcatt 44267978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 237
Target Start/End: Original strand, 54412547 - 54412639
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatattaatcatt 237  Q
    ||||||||  ||||||||||||| |||||||||||  |||  |||||| || |||||| ||||||||  |||||| |||||||||||||||||    
T  54412547 aaattcaggaactaaatagatatctcgcaaaattcaaggacgaatttgaccaattttttaaaattcacggacgaatttgagatattaatcatt 54412639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 236
Target Start/End: Original strand, 53094273 - 53094364
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatattaatcat 236  Q
    |||||||| |||||| | |||||||||||||||||  |||  || ||||||||||||| ||||||||| |||||| ||||| ||||| ||||    
T  53094273 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcat 53094364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 38193510 - 38193596
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||| | |||||||||||||||||  |||  || ||||||||||||| ||||||||| |||||| ||||| |||||    
T  38193510 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 38193596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 41979352 - 41979438
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||| | |||||||||||||||||  |||  || ||||||||||||| ||||||||| |||||| ||||| |||||    
T  41979352 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 41979438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 46308896 - 46308810
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||| | |||||||||||||||||  |||  || ||||||||||||| ||||||||| |||||| ||||| |||||    
T  46308896 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 46308810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 46310436 - 46310522
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||| | |||||||||||||||||  |||  || ||| ||||||||| |||||||||||||||| ||||| |||||    
T  46310436 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaagacgaatttgaggtatta 46310522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 46114105 - 46114162
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgattttt 202  Q
    |||||||  ||||||||||||||||||||||||||  ||| |||||||||||||||||    
T  46114105 aaattcaatgactaaatagatatttcgcaaaattcaaggacaaatttggccgattttt 46114162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 3150341 - 3150255
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||| | |||||||||||||||||  |||  || ||| ||||||||| ||||||||| |||||| ||||| |||||    
T  3150341 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 3150255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 46609238 - 46609152
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||| | |||||||| ||||||||  |||  || ||||||||||||| |||||||||  ||||| |||||||||||    
T  46609238 aaattcagggactaatttgatatttcacaaaattcagggacgaaattggccgatttttcaaaattcaagaacgaatttgagatatta 46609152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 54900074 - 54900160
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| ||| || | |||||||||||||||||  |||  || ||||||||||||| ||||||||| |||||| ||||| |||||    
T  54900074 aaattcagggacaaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 54900160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 600805 - 600728
Alignment:
Q  154 gactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||||||||||| | ||||||| || | |||||||| |||||||| ||||||||| || ||| ||||| |||||    
T  600805 gactaaatagatattttgtaaaattcatgaacaaatttggtcgattttttaaaattcaaggatgaatttgaggtatta 600728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 224
Target Start/End: Original strand, 2977340 - 2977443
Alignment:
Q  121 ggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaag 220  Q
    ||||| |||||||| |||| ||  ||||| || |||| ||| ||||||||||| ||||   |||| |||||||||||||  ||||||||||| ||||||     
T  2977340 ggacctttttgatggacgtatgacaaatttagggactgaattgatatttcgcataattaagggatgaatttggccgattcgtaaaaattcaaggacgaat 2977439  T
Q  221 ttga 224  Q
    ||||    
T  2977440 ttga 2977443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 48634000 - 48633933
Alignment:
Q  111 ttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaatt 178  Q
    ||||||| ||||||| |||||||| |||||||  |||||||| |||||| | ||||||||||| ||||    
T  48634000 ttggacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataatt 48633933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 7883417 - 7883331
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||||||||  ||||| | |||||||| |||||||   |||  || ||||||||||||| |||||||||||||||| ||||| |||||    
T  7883417 aaattcaggaactaatttgatatttcacaaaatttagggacgaaattggccgatttttcaaaattcaaagacgaaattgaggtatta 7883331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 38191984 - 38191898
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||| | |||||||||||||||||  |||  || |||||| |||||| |||||| || |||||| ||||| |||||    
T  38191984 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaaggacgaatttgaggtatta 38191898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 53092712 - 53092626
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| || ||| | |||||||||||||||||  |||  || |||||| |||||| |||||| ||||||||| ||||| |||||    
T  53092712 aaattcagggattaatttgatatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaaagacgaatttgaggtatta 53092626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 53187831 - 53187745
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||| | |||||||||||||||||  |||  || ||| ||||||||| ||||||||| ||| || ||||| |||||    
T  53187831 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacaaatttgaggtatta 53187745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 224
Target Start/End: Complemental strand, 23774259 - 23774162
Alignment:
Q  127 ttttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttga 224  Q
    |||||||| |||||||  |||||||| |||||||| ||||||||||| ||||   |||  ||||||||||| |  | ||||||||| |||||| ||||    
T  23774259 ttttgatggacgtctgacaaattcagggactaaattgatatttcgcataattgagggacgaatttggccgactcgtgaaaattcaaggacgaatttga 23774162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 33852679 - 33852752
Alignment:
Q  119 agggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttg 192  Q
    ||||||| |||||||| |||||||  ||||||||| | ||||| ||||||||||| ||||   |||||||||||    
T  33852679 agggacctttttgatggacgtctgataaattcagaaattaaattgatatttcgcataattgagggataaatttg 33852752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 51686403 - 51686480
Alignment:
Q  154 gactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||||||||| |||||||||||||||   |||  |||||||| ||||||| |||||| || |||||| ||||| |||||    
T  51686403 gactaaataaatatttcgcaaaatttagggacgaatttggctgatttttgaaaatttaaggacgaatttgaggtatta 51686480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 600853 - 600809
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatg 134  Q
    |||||||||||||  |||||||| |||| ||||||||||||||||    
T  600853 tcatcaccactaacggagcttttagacggagggaccattttgatg 600809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 145 - 225
Target Start/End: Original strand, 2661908 - 2661988
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgag 225  Q
    |||||||  |||||| | |||||||||||||||||  |||  || |||| |||||||| ||||||||| |||||| |||||    
T  2661908 aaattcatggactaatttgatatttcgcaaaattcacggacgaaattggtcgatttttcaaaattcaaggacgaatttgag 2661988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 2e-42; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 87 - 231
Target Start/End: Complemental strand, 13282625 - 13282481
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    ||||||||||||||||  ||||||||||||| |||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||  |||      
T  13282625 acatcatcaccactaacggagcttttggacggagggaccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggacg 13282526  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||||||||||| ||||||||| |||||| ||||| |||||    
T  13282525 aatttggccgattttttaaaattcaaggacgaatttgaggtatta 13282481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 90 - 231
Target Start/End: Original strand, 8609787 - 8609928
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    |||||||||||||  ||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||  |||  |||    
T  8609787 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 8609886  T
Q  190 ttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||||||||||||| |||||||||  ||||| ||||| |||||    
T  8609887 ttggccgattttttaaaattcaagaacgaatttgaggtatta 8609928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 87 - 235
Target Start/End: Original strand, 26242311 - 26242459
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    |||||||| |||||||  ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||   |||      
T  26242311 acatcatcgccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaatttagggacg 26242410  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatattaatca 235  Q
    |||||||| ||||||| |||||||||  ||||| ||||| |||||||||    
T  26242411 aatttggctgatttttgaaaattcaagaacgaaattgaggtattaatca 26242459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 90 - 236
Target Start/End: Complemental strand, 38547372 - 38547226
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    |||||||||||||  ||||||||||| | |||||||||||||||| ||||||||||||||||| |||||| | ||||||||||||||||| ||||   ||    
T  38547372 tcatcaccactaacggagcttttggatggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcatggacgtat 38547273  T
Q  190 ttggccgatttttaaaaattcaaagacgaagttgagatattaatcat 236  Q
    ||||||||||||| ||||||||| |||||| ||||| ||||| ||||    
T  38547272 ttggccgattttttaaaattcaaggacgaacttgaggtattagtcat 38547226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 41042581 - 41042711
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    ||||||||||||||||  ||||||||||||| |||||||||||||||| ||| ||||||||||||| ||||||||||||||||| ||||||||  ||| |    
T  41042581 acatcatcaccactaacggagcttttggacggagggaccattttgatggacgcctgtaaaattcagggactaaatagatatttcacaaaattcagggaca 41042680  T
Q  187 aatttggccgatttttaaaaattcaaagacg 217  Q
    ||||||||| |||||| ||||||||| ||||    
T  41042681 aatttggccaattttttaaaattcaaggacg 41042711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 87 - 231
Target Start/End: Original strand, 7745109 - 7745253
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    ||||||||||||||||  ||||||||||| | |||||||||||||||| | ||||||||||| ||| ||||||||| ||||||||||||||||   ||      
T  7745109 acatcatcaccactaacggagcttttggatggagggaccattttgatggatgtctgtaaaatacagggactaaataaatatttcgcaaaattcagagacg 7745208  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| ||||||| |||||||||||||||| |||||||||||    
T  7745209 aatttggctgatttttgaaaattcaaagacgaatttgagatatta 7745253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 87 - 235
Target Start/End: Original strand, 41825641 - 41825789
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    |||||||||| ||||| |||||||||||||| || ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||  |||      
T  41825641 acatcatcactactaacagagcttttggacggagtgaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacg 41825740  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatattaatca 235  Q
    |||||    ||||||| ||||||||| |||||| ||||| |||||||||    
T  41825741 aatttatttgatttttgaaaattcaaggacgaatttgaggtattaatca 41825789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 90 - 231
Target Start/End: Original strand, 13108336 - 13108477
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    |||||||||||||   |||||||||||| |||||||||||||||| ||||||||||||||||| |||||| | |||||||||||||||||  |||   ||    
T  13108336 tcatcaccactaacgaagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtat 13108435  T
Q  190 ttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    || |||||||||| ||||||||| |||||| ||||| |||||    
T  13108436 ttagccgattttttaaaattcaaggacgaatttgagttatta 13108477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 87 - 212
Target Start/End: Original strand, 13486096 - 13486221
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    |||||||||| |||||| ||||||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |   ||      
T  13486096 acatcatcactactaatggagcttttggacagagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaatccagagacg 13486195  T
Q  187 aatttggccgatttttaaaaattcaa 212  Q
    ||| || |||||||||||||||||||    
T  13486196 aatctgaccgatttttaaaaattcaa 13486221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 87 - 233
Target Start/End: Complemental strand, 42941921 - 42941775
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    |||||||| |||||||  ||| ||||||||| |||||| ||||||||| || |||||||||||||| ||||||||| ||||||| ||||||||  |||      
T  42941921 acatcatctccactaacggagattttggacggagggactattttgatggacatctgtaaaattcagggactaaataaatatttctcaaaattcagggacg 42941822  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatattaat 233  Q
    |||||||| ||||||| ||||||||| |||||| ||||| |||||||    
T  42941821 aatttggctgattttttaaaattcaaggacgaatttgaggtattaat 42941775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 87 - 231
Target Start/End: Complemental strand, 22272483 - 22272337
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    ||||||||||||||||  ||||||||||| | |||||| ||||||||| |||| |||||||||||| ||||||||||||||| ||||||||||  |||      
T  22272483 acatcatcaccactaacggagcttttggatggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcagggacg 22272384  T
Q  187 aatttggccga--tttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||| | ||  ||||| |||||||||||||||| ||||| |||||    
T  22272383 aatttgactgattttttttaaaattcaaagacgaatttgaggtatta 22272337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 9673162 - 9673254
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattc 179  Q
    ||||||||||||||||   ||||||| |||| |||||||||||||||| ||||||||||||||||| || |||||||||||||| ||||||||    
T  9673162 acatcatcaccactaacgaagcttttagacggagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttcacaaaattc 9673254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 27691280 - 27691157
Alignment:
Q  108 cttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaa 207  Q
    |||||||||| ||||||   ||||||| ||||||||||||||||| |||||| | |||||||||||||||||  |||  || ||||||||||||| ||||    
T  27691280 cttttggacggagggacggatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaa 27691181  T
Q  208 ttcaaagacgaagttgagatatta 231  Q
    ||||| |||||| ||||| |||||    
T  27691180 ttcaaggacgaatttgaggtatta 27691157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 40339677 - 40339769
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattc 179  Q
    |||||||||| |||||  ||||||||||| |||||||||||||||||| || |||||||||||||  ||||||||||||||||| || |||||    
T  40339677 acatcatcactactaacggagcttttggatgaagggaccattttgatggacatctgtaaaattcatggactaaatagatatttcacataattc 40339769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 87 - 231
Target Start/End: Complemental strand, 5036596 - 5036448
Alignment:
Q  87 acatcatcaccactaatagagcttt----tggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttg 182  Q
    ||||||||| |||||| ||||||||    |||||| || ||||||||||||  ||||||||||||||||  ||||||||||||||||| ||||||||  |    
T  5036596 acatcatcatcactaacagagctttaatttggacggagagaccattttgatagacgtctgtaaaattcaaggactaaatagatatttcacaaaattcagg 5036497  T
Q  183 gataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||  |||||| | ||||||| |||||| || |||||| ||||| |||||    
T  5036496 gacgaatttgacggattttttaaaatttaaggacgaatttgaggtatta 5036448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 42943426 - 42943512
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| ||||||||||||||||||||||||||  |||  |||||||||||||||| ||||||||| |||||| ||||| |||||    
T  42943426 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtatta 42943512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 34681075 - 34681152
Alignment:
Q  154 gactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||||||||||||||||||||||||||  |||  |||||||||||||||| ||||||||| |||||| ||||| |||||    
T  34681075 gactaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtatta 34681152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 22273891 - 22273977
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||||||||||||| |||||||||   || ||||||||||||||||| ||||||||| ||| || ||||| |||||    
T  22273891 aaattcagggactaaatagatattttgcaaaattcagagacaaatttggccgattttttaaaattcaaggacaaatttgaggtatta 22273977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 26238806 - 26238729
Alignment:
Q  154 gactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||||||||||||||||||||||||||  |||  |||||||| ||||||| ||||||||| |||||| ||||| |||||    
T  26238806 gactaaatagatatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtatta 26238729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 237
Target Start/End: Complemental strand, 33761158 - 33761066
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatattaatcatt 237  Q
    |||||||| |||||| | |||||||||||||||||  |||  || ||||| ||||||| |||||||||||||||| ||||| ||||| |||||    
T  33761158 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggctgatttttcaaaattcaaagacgaatttgaggtattagtcatt 33761066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 13106893 - 13106819
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaa 219  Q
    |||||||| |||||| | |||||||||||||||||  |||| || ||||||||||||| ||||||||| ||||||    
T  13106893 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaa 13106819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 235
Target Start/End: Original strand, 13283995 - 13284085
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatattaatca 235  Q
    |||||||  |||||| | |||||||||||||||||  ||| ||| ||||||||||||| ||||||||| |||||| ||| | |||||||||    
T  13283995 aaattcatggactaatttgatatttcgcaaaattcagggacaaaattggccgatttttcaaaattcaaggacgaatttgtggtattaatca 13284085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 237
Target Start/End: Original strand, 33762713 - 33762805
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatattaatcatt 237  Q
    |||||||| |||||| | ||||||||| |||||||  |||  || ||||||||||||| ||||||||| |||||| ||||| ||||| |||||    
T  33762713 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcatt 33762805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 145 - 236
Target Start/End: Original strand, 38548831 - 38548922
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatattaatcat 236  Q
    |||||||| || ||| | |||||||||||||||||  |||  || ||||||||||||| ||||||||| |||||| ||||| ||||| ||||    
T  38548831 aaattcagggattaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcat 38548922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 601704 - 601790
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||| | ||||||||| |||||||  |||  || ||||||||||||| ||||||||| |||||| ||||| |||||    
T  601704 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 601790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 5038062 - 5038147
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||||||| |||||||||||||||  | |  |||||| ||||||||| ||||||| |||||||| ||||| |||||    
T  5038062 aaattcagggactaaatagctatttcgcaaaattcaagaacgaatttgaccgattttttaaaattc-aagacgaatttgaggtatta 5038147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 27692837 - 27692923
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||| | ||||||| |||||||||  |||  || ||||||||||||| ||||||||| |||||| ||||| |||||    
T  27692837 aaattcagggactaatttgatattttgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 27692923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 33708801 - 33708893
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattc 179  Q
    |||||||||| | |||  || |||||||||| ||||||   ||||||| |||| |||||||||||| |||||| |  ||||||||||||||||    
T  33708801 acatcatcactattaacggaccttttggacggagggacagatttgatggacgtttgtaaaattcagggactaatttaatatttcgcaaaattc 33708893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 13484613 - 13484554
Alignment:
Q  166 atttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgag 225  Q
    ||||||||||||||  |||  |||||||||||||||| ||||||||| |||||| |||||    
T  13484613 atttcgcaaaattcagggacgaatttggccgatttttgaaaattcaatgacgaatttgag 13484554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 212
Target Start/End: Complemental strand, 15305922 - 15305819
Alignment:
Q  109 ttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaat 208  Q
    ||||||||| ||||||   ||||||| ||||||||||||||||| |||||| | ||||||||  | |||||  ||| ||| ||| || |||||| |||||    
T  15305922 ttttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattcagggacaaaattgaccaatttttcaaaat 15305823  T
Q  209 tcaa 212  Q
    ||||    
T  15305822 tcaa 15305819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 212
Target Start/End: Complemental strand, 15486291 - 15486188
Alignment:
Q  109 ttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaat 208  Q
    ||||||||| ||||||   ||||||| ||||||||||||||||| |||||| | ||||||||  | |||||  ||| ||| ||| || |||||| |||||    
T  15486291 ttttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattcagggacaaaattgaccaatttttcaaaat 15486192  T
Q  209 tcaa 212  Q
    ||||    
T  15486191 tcaa 15486188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 33750385 - 33750452
Alignment:
Q  111 ttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaatt 178  Q
    ||||||| ||||||| |||||||||| |||||  |||||||| |||||| | ||||||||||| ||||    
T  33750385 ttggacggagggacctttttgatgaatgtctgacaaattcagggactaagttgatatttcgcataatt 33750452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 37526024 - 37526091
Alignment:
Q  111 ttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaatt 178  Q
    ||||||| ||||||| |||||||| | ||||| ||||||||| |||||| | ||||||||||| ||||    
T  37526024 ttggacggagggacctttttgatggatgtctgaaaaattcagggactaagttgatatttcgcataatt 37526091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 29239187 - 29239273
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||| | ||||||||| ||||||   |||  || ||||||||||||| ||||||||| |||||| ||||| |||||    
T  29239187 aaattcagggactaatttgatatttcgaaaaatttagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 29239273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 119 - 197
Target Start/End: Original strand, 31201152 - 31201230
Alignment:
Q  119 agggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccga 197  Q
    ||||||| |||||||| |||||||  |||||||| || ||||| ||||||||||| ||||  ||||  |||||||||||    
T  31201152 agggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgatggacgaatttggccga 31201230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 35509303 - 35509217
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||| | |||||||||||||||||  |||  || ||| ||||||||| ||||||||| ||| || ||||| |||||    
T  35509303 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggactaatttgaggtatta 35509217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 224
Target Start/End: Original strand, 462387 - 462484
Alignment:
Q  127 ttttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttga 224  Q
    |||||||| |||| ||  |||||||  |||||| | ||||||||||| ||||   |||| |||||||||||| | ||||||||||| |||||| ||||    
T  462387 ttttgatggacgtttgacaaattcaaggactaagttgatatttcgcataattgacggatgaatttggccgatctgtaaaaattcaatgacgaatttga 462484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 33160157 - 33160262
Alignment:
Q  119 agggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacga 218  Q
    ||||||| ||||||||  ||||||  ||||||||||||||| | |||||||| || ||||   |||| |||||||||||  | | ||||||||| |||||    
T  33160157 agggacctttttgatgggcgtctgacaaattcagagactaagttgatatttcacataattgagggatgaatttggccgacctgtgaaaattcaaggacga 33160256  T
Q  219 agttga 224  Q
    | ||||    
T  33160257 atttga 33160262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 41040767 - 41040718
Alignment:
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatattaatcat 236  Q
    ||||| |||||||||||||||||||||||| || ||||| ||||| ||||    
T  41040767 aatttagccgatttttaaaaattcaaagacaaatttgaggtattagtcat 41040718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 41823970 - 41823905
Alignment:
Q  154 gactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaa 219  Q
    ||||||||||||||||||||||||||  |||  || || || ||||||| ||||||||| ||||||    
T  41823970 gactaaatagatatttcgcaaaattcaaggacgaaattagctgatttttgaaaattcaaggacgaa 41823905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 128 - 212
Target Start/End: Original strand, 27406935 - 27407019
Alignment:
Q  128 tttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaa 212  Q
    ||||||| ||||||||||||||||| |||||  |  |||||||| | ||||| ||||  || |||||| |||||| |||||||||    
T  27406935 tttgatggacgtctgtaaaattcagggactattttaatatttcgaataattcatggacgaaattggccaatttttcaaaattcaa 27407019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 6e-39; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 87 - 233
Target Start/End: Original strand, 7372935 - 7373081
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||| ||| ||||||||||||| ||||||||| ||||||||||||||||  |||      
T  7372935 acatcatcaccactaatggagcttttggacggagggaccattttgatggacgcctgtaaaattcagggactaaataaatatttcgcaaaattcagggacg 7373034  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatattaat 233  Q
    |||||| || ||||||||||||||||  ||||| ||||| |||||||    
T  7373035 aatttgaccaatttttaaaaattcaatcacgaatttgaggtattaat 7373081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 87 - 210
Target Start/End: Complemental strand, 20523513 - 20523390
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    |||||||||||||||| ||| |||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||  |||      
T  20523513 acatcatcaccactaacagaacttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacg 20523414  T
Q  187 aatttggccgatttttaaaaattc 210  Q
    |||||| ||||||||| |||||||    
T  20523413 aatttgaccgatttttgaaaattc 20523390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 90 - 237
Target Start/End: Original strand, 32439071 - 32439218
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    ||||||| ||||| ||| |||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||  |||  |||    
T  32439071 tcatcactactaacagatcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaat 32439170  T
Q  190 ttggccgatttttaaaaattcaaagacgaagttgagatattaatcatt 237  Q
    ||| ||||||||| ||||||||| ||| || ||||| ||||| |||||    
T  32439171 ttgaccgattttttaaaattcaatgactaatttgaggtattagtcatt 32439218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 87 - 236
Target Start/End: Original strand, 13613559 - 13613708
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    ||||||||||||||||| || |||||||||| |||||| | ||||||| ||||||||||||||||| |||||| | |||||||||||||||||  |||      
T  13613559 acatcatcaccactaatggaccttttggacggagggactaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacg 13613658  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatattaatcat 236  Q
    |||||| ||||||||| ||||||||| |||||| || || ||||| ||||    
T  13613659 aatttgaccgatttttcaaaattcaaggacgaatttaaggtattagtcat 13613708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 87 - 179
Target Start/End: Complemental strand, 9398807 - 9398715
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattc 179  Q
    ||||||||||||||||  || |||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  9398807 acatcatcaccactaacggaacttttggacggagggaccattttgatgaacgtctataaaattcagggactaaatagatatttcgcaaaattc 9398715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 87 - 240
Target Start/End: Complemental strand, 6899632 - 6899479
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    ||||||||| ||||||  |||||||||||||||||||||||||||||| | |||||||||||| || ||||||||||||||||| |||||||    ||      
T  6899632 acatcatcaacactaacggagcttttggacgaagggaccattttgatggatgtctgtaaaatttagggactaaatagatatttcacaaaatttagagacg 6899533  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatattaatcattata 240  Q
    |||||| | ||||||| ||||||||| ||| || ||||| ||||| ||||||||    
T  6899532 aatttgactgatttttgaaaattcaaggacaaatttgaggtattagtcattata 6899479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 87 - 224
Target Start/End: Complemental strand, 10568546 - 10568409
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    ||||||||||||||||  ||||||||||||| |||||| ||||||||  ||||||||||||||||| ||||||||| ||||||||| ||||||  |||      
T  10568546 acatcatcaccactaacggagcttttggacggagggactattttgatagacgtctgtaaaattcagggactaaataaatatttcgctaaattcaaggacg 10568447  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttga 224  Q
    |||||| | ||||||| ||||||||| |||||| ||||    
T  10568446 aatttgactgatttttgaaaattcaaggacgaatttga 10568409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 90 - 231
Target Start/End: Complemental strand, 32517021 - 32516880
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    |||||||||||||  ||||||||||||| |||||| ||||||||| |||| |||||||||||  | |||||||| ||||| | |||||||  |||  |||    
T  32517021 tcatcaccactaacggagcttttggacggagggacaattttgatggacgtatgtaaaattcaagggctaaataggtattttgtaaaattcagggacgaat 32516922  T
Q  190 ttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||| ||||||||| ||||||||| |||||| ||||| |||||    
T  32516921 ttgaccgattttttaaaattcaaggacgaatttgaggtatta 32516880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 87 - 223
Target Start/End: Original strand, 14338452 - 14338588
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    ||||||||| || |||  ||||||||| ||| |||||||||||||||| |||||||| |||||||| ||  || |||| |||||||||||||   |||      
T  14338452 acatcatcatcagtaacggagcttttgaacggagggaccattttgatggacgtctgtgaaattcagggatgaattagacatttcgcaaaatttgaggacg 14338551  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttg 223  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  14338552 aatttggctgatttttaaaaattcaaggacgaagttg 14338588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 90 - 231
Target Start/End: Complemental strand, 11355366 - 11355225
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    ||||||||||||   ||||||||||||| ||||||||||||| ||  |||||||||||||||| || | ||||||||||||  |||||||   ||  |||    
T  11355366 tcatcaccactaccggagcttttggacggagggaccattttggtggccgtctgtaaaattcagggagttaatagatatttcataaaattcagtgacgaat 11355267  T
Q  190 ttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    ||| ||||||||| ||||||||| |||||| ||||| |||||    
T  11355266 ttgaccgattttttaaaattcaaggacgaatttgaggtatta 11355225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 7049904 - 7049839
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcag 152  Q
    ||||||||||||| ||  ||||||||||||| |||||||||||||||| |||||||||||||||||    
T  7049904 acatcatcaccacgaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcag 7049839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 32518497 - 32518583
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||| | |||||||||||||||||  |||| || ||||||||||||| ||||||||| |||||| ||||| |||||    
T  32518497 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtatta 32518583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 10569928 - 10570005
Alignment:
Q  154 gactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||||||||||| ||||||||| ||||  |||||||| ||||||| ||||||||| |||||| ||||| |||||    
T  10569928 gactaaatagatattttgcaaaattcatggacgaatttggctgattttttaaaattcaaggacgaatttgaggtatta 10570005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 212
Target Start/End: Complemental strand, 3456873 - 3456770
Alignment:
Q  109 ttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaat 208  Q
    ||||||||| ||||||   ||||||| ||||||| ||||||||| |||||| | ||||||||| |||||||  |||  || ||||||||||||| |||||    
T  3456873 ttttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaat 3456774  T
Q  209 tcaa 212  Q
    ||||    
T  3456773 tcaa 3456770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 7371244 - 7371178
Alignment:
Q  165 tatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||||||||||  |||  |||||||||||||||| ||||||||| |||||||||||| |||||    
T  7371244 tatttcgcaaaattcagggaccaatttggccgatttttgaaaattcaaggacgaagttgaggtatta 7371178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 9400035 - 9400121
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||| | |||||| |||||||||||||||||||  |||| |||||| | ||||||| ||||||||| |||||| ||||| |||||    
T  9400035 aaattcggggactaattagatatttcgcaaaattcaaggatgaatttgactgatttttcaaaattcaaggacgaatttgaggtatta 9400121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 20525334 - 20525420
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||  ||| |||||| ||||| |||||||||  |||| |||||| || ||||||||||||||||||||||| ||||| |||||    
T  20525334 aaattcaaggacaaaatagctattttgcaaaattcagggatgaatttgacctatttttaaaaattcaaagacgaatttgaggtatta 20525420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 32454337 - 32454240
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatattaatcattatata 242  Q
    |||||||| |||||| | ||||||||| |||||||  |||  || ||||||||||||| ||||||||| ||| |  ||||| ||||| ||||||||||    
T  32454337 aaattcagggactaatttgatatttcgaaaaattcaaggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtcattatata 32454240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 97 - 199
Target Start/End: Complemental strand, 30891261 - 30891159
Alignment:
Q  97 cactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaatttggccg 196  Q
    |||||||||||| |||||||| |||||| | |||| || |||||||  |||||||| |||||||   |||||| ||| ||||   ||||||||||| |||    
T  30891261 cactaatagagcatttggacggagggactactttgttggacgtctgacaaattcagggactaaacgtatattttgcataatttaaggataaatttgaccg 30891162  T
Q  197 att 199  Q
    |||    
T  30891161 att 30891159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 13610770 - 13610705
Alignment:
Q  154 gactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaa 219  Q
    |||||| | |||||||||||||||||  ||| |||||||  |||||||| ||||||||| ||||||    
T  13610770 gactaatttgatatttcgcaaaattcagggacaaatttgatcgatttttcaaaattcaaggacgaa 13610705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 21068705 - 21068628
Alignment:
Q  154 gactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||||||||||||| ||||||  ||||  |||||| | |||| || ||||||||| |||||| ||||| |||||    
T  21068705 gactaaatagatatttcgtaaaatttgtggacgaatttgactgattgttgaaaattcaaggacgaatttgaggtatta 21068628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 73; Significance: 5e-33; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 90 - 234
Target Start/End: Complemental strand, 1407 - 1263
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    |||||||||||||  ||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||  ||||||| ||||  |||    
T  1407 tcatcaccactaacggagcttttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcataaaattcatggacgaat 1308  T
Q  190 ttggccgatttttaaaaattcaaagacgaagttgagatattaatc 234  Q
    ||  || |||||| ||||||||| |||| | ||||| ||||||||    
T  1307 ttaaccaattttttaaaattcaaggacggatttgaggtattaatc 1263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 65; Significance: 3e-28; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 87 - 231
Target Start/End: Complemental strand, 3441 - 3297
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    |||||||||| | |||  || |||||||||| |||||| | ||||||| ||||||||||||||||| |||||| | |||||||||||||||||  ||| |    
T  3441 acatcatcactattaacggaccttttggacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggaca 3342  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    || ||||||||||||| ||||||||| |||||| ||||| |||||    
T  3341 aaattggccgatttttcaaaattcaaggacgaatttgaggtatta 3297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 87 - 231
Target Start/End: Complemental strand, 4613 - 4469
Alignment:
Q  87 acatcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggata 186  Q
    |||||||||| | |||  || |||||||||| |||||| | ||||||| ||||||||||||||||| |||||| | |||||||||||||||||  ||| |    
T  4613 acatcatcactattaacggaccttttggacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggaca 4514  T
Q  187 aatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    || ||||||||||||| ||||||||| |||||| ||||| |||||    
T  4513 aaattggccgatttttcaaaattcaaggacgaatttgaggtatta 4469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 14343 - 14429
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||||| |||||| | |||||||||||||||||  |||  || || |||||||||| ||||||||| |||||| ||||| |||||    
T  14343 aaattcagggactaatttgatatttcgcaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtatta 14429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 90 - 231
Target Start/End: Complemental strand, 8404 - 8265
Alignment:
Q  90 tcatcaccactaatagagcttttggacgaagggaccattttgatgaacgtctgtaaaattcagagactaaatagatatttcgcaaaattcttggataaat 189  Q
    |||||||||||||   |||||||||||| | | |||||||||||| |||| |  ||||||||| |||||||||||||||| |||||||||  | |  |||    
T  8404 tcatcaccactaacgaagcttttggacggatgtaccattttgatggacgtat--aaaattcagggactaaatagatattttgcaaaattcaagaacgaat 8307  T
Q  190 ttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||| |||||| ||||||||| |||||| ||||| |||||    
T  8306 ttggccaattttttaaaattcaaggacgaatttgaggtatta 8265  T

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Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 106757 - 106673
Alignment:
Q  145 aaattcagagactaaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgagatatta 231  Q
    |||||| || ||||||||||||||||| ||||||| |||| ||||||||| ||||  |  |||||||| |||||| |||||||||||    
T  106757 aaattcggaaactaaatagatatttcgtaaaattcatggacaaatttggctgattggt--aaattcaaggacgaatttgagatatta 106673  T

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Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 436341 - 436274
Alignment:
Q  158 aaatagatatttcgcaaaattcttggataaatttggccgatttttaaaaattcaaagacgaagttgag 225  Q
    |||||||||||||||||||||  ||||| |||||||| ||||||| |||||||||  ||||| |||||    
T  436341 aaatagatatttcgcaaaatttatggatgaatttggctgatttttgaaaattcaagaacgaatttgag 436274  T

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