View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0719_low_22 (Length: 309)
Name: NF0719_low_22
Description: NF0719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0719_low_22 |
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Alignment Details
Target: chr4 (Bit Score: 139; Significance: 1e-72; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 27939624 - 27939478
Alignment:
| Q |
1 |
tcctcattctcctccttgttctctcaattttcattattttcgcattctcttcttctaaactggtatgctcctatgacccttttgtttatatattgctgtc |
100 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |
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| T |
27939624 |
tcctcattctcctccttgttctctcaattttcattattttcgcattctcttcttctaaactggtatgctcttatgacccttttgtctatatattgctgtc |
27939525 |
T |
|
| Q |
101 |
attgtggatctgatctgggttattgataatatgaattaaaaatgtga |
147 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27939524 |
attgtggatctgatctgggttattgataatatgaattaaaaatgtga |
27939478 |
T |
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