View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0719_low_32 (Length: 274)
Name: NF0719_low_32
Description: NF0719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0719_low_32 |
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Alignment Details
Target: chr4 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 121 - 228
Target Start/End: Original strand, 9471600 - 9471706
Alignment:
| Q |
121 |
gagatcgatgtcgtgattaataagagatcgtcttgtctcttgtcaagaatgaaaatgttaaaagttggggaaaaggtgtcatgtgggatgtggggggaat |
220 |
Q |
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| T |
9471600 |
gagatcgatgtcgtgattaataagagatcgtcttgtctcttgtcaagaatgaaaatgtt-aaagttggggaaaaggtgtcatgtgggatgtggggggaat |
9471698 |
T |
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| Q |
221 |
aggatgat |
228 |
Q |
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|||||||| |
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| T |
9471699 |
aggatgat |
9471706 |
T |
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