View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0719_low_48 (Length: 244)
Name: NF0719_low_48
Description: NF0719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0719_low_48 |
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Alignment Details
Target: chr6 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 15 - 153
Target Start/End: Original strand, 31277783 - 31277920
Alignment:
| Q |
15 |
catcatcaaccaagctcaaatttaccgccaagcattgcctagcttcaccaacaacaacaaaggcgcgtcggccttgtaacgtcccgggattttgatcaag |
114 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||| |||||||||||||| |
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| T |
31277783 |
catcatcaaccaagctcaaatttaccgccaagcattgcctagcttcaccaacaacaacaaaagcgcatcggccttgtaac-accccggattttgatcaag |
31277881 |
T |
|
| Q |
115 |
acattacgcctactatttttatattagaaaaacaagact |
153 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
31277882 |
acattacgcctactatttttatattagaaaaacaagact |
31277920 |
T |
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