View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0720-INSERTION-3 (Length: 692)

Name: NF0720-INSERTION-3
Description: NF0720
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0720-INSERTION-3
NF0720-INSERTION-3
[»] chr3 (45 HSPs)
chr3 (8-342)||(11772807-11773142)
chr3 (355-692)||(11777148-11777486)
chr3 (8-252)||(11778360-11778604)
chr3 (377-574)||(26929306-26929506)
chr3 (418-566)||(6025713-6025859)
chr3 (260-380)||(17701928-17702048)
chr3 (260-382)||(55388065-55388187)
chr3 (260-372)||(2591629-2591741)
chr3 (260-379)||(2592016-2592135)
chr3 (263-372)||(48572987-48573096)
chr3 (260-372)||(36278954-36279066)
chr3 (377-508)||(53120115-53120247)
chr3 (418-508)||(33088683-33088773)
chr3 (428-568)||(21493654-21493795)
chr3 (378-508)||(13022644-13022775)
chr3 (260-372)||(17700520-17700632)
chr3 (260-380)||(52318326-52318446)
chr3 (418-533)||(26962660-26962777)
chr3 (260-372)||(34263807-34263919)
chr3 (378-505)||(38436340-38436468)
chr3 (263-372)||(45600951-45601059)
chr3 (260-379)||(47118060-47118179)
chr3 (260-322)||(36280326-36280388)
chr3 (262-372)||(55389480-55389590)
chr3 (263-372)||(52316981-52317090)
chr3 (262-360)||(48808380-48808478)
chr3 (261-372)||(19115157-19115267)
chr3 (263-378)||(33428447-33428562)
chr3 (263-322)||(48574471-48574530)
chr3 (260-371)||(50753820-50753931)
chr3 (264-377)||(47075364-47075477)
chr3 (260-322)||(3671090-3671152)
chr3 (264-366)||(19114541-19114643)
chr3 (263-365)||(20464078-20464180)
chr3 (279-372)||(53957677-53957769)
chr3 (428-508)||(20811058-20811138)
chr3 (265-332)||(33427794-33427860)
chr3 (264-322)||(53959113-53959171)
chr3 (264-386)||(49261550-49261668)
chr3 (264-342)||(36827488-36827566)
chr3 (275-342)||(47427892-47427959)
chr3 (263-294)||(48809666-48809697)
chr3 (299-365)||(19331117-19331183)
chr3 (261-291)||(45598988-45599018)
chr3 (264-372)||(40205883-40205992)
[»] chr6 (14 HSPs)
chr6 (418-565)||(13660432-13660581)
chr6 (378-536)||(10485694-10485857)
chr6 (422-566)||(11956064-11956212)
chr6 (378-568)||(17289605-17289802)
chr6 (377-508)||(19478732-19478864)
chr6 (418-536)||(3902858-3902978)
chr6 (425-566)||(29326239-29326383)
chr6 (264-380)||(30747993-30748109)
chr6 (378-507)||(17280925-17281055)
chr6 (260-377)||(31218952-31219069)
chr6 (264-372)||(31219173-31219281)
chr6 (377-485)||(28696923-28697035)
chr6 (260-372)||(23507951-23508062)
chr6 (470-508)||(14450663-14450701)
[»] chr4 (24 HSPs)
chr4 (378-568)||(24490689-24490884)
chr4 (378-508)||(10119873-10120004)
chr4 (393-564)||(10318188-10318360)
chr4 (263-377)||(47874561-47874675)
chr4 (260-372)||(42278051-42278163)
chr4 (264-377)||(53771062-53771175)
chr4 (263-372)||(47878496-47878605)
chr4 (263-326)||(26172954-26173017)
chr4 (418-504)||(653624-653710)
chr4 (475-566)||(8082773-8082865)
chr4 (268-372)||(31844724-31844828)
chr4 (258-377)||(4703224-4703343)
chr4 (268-326)||(54574822-54574880)
chr4 (264-372)||(53770335-53770443)
chr4 (267-342)||(54574457-54574532)
chr4 (264-314)||(19050298-19050348)
chr4 (264-381)||(39868915-39869030)
chr4 (260-372)||(48740029-48740141)
chr4 (260-322)||(21621875-21621937)
chr4 (260-322)||(50694801-50694863)
chr4 (263-314)||(26170700-26170751)
chr4 (260-314)||(4701825-4701879)
chr4 (268-382)||(36453823-36453937)
chr4 (379-502)||(17360069-17360194)
[»] scaffold0067 (1 HSPs)
scaffold0067 (377-568)||(33303-33498)
[»] chr2 (31 HSPs)
chr2 (422-566)||(43111474-43111618)
chr2 (260-372)||(31090166-31090278)
chr2 (385-508)||(42915165-42915289)
chr2 (263-372)||(17330242-17330351)
chr2 (263-378)||(32766251-32766366)
chr2 (260-378)||(32764934-32765052)
chr2 (260-372)||(2910102-2910214)
chr2 (264-372)||(31091540-31091648)
chr2 (260-372)||(7073641-7073753)
chr2 (264-377)||(24458057-24458170)
chr2 (260-368)||(24459455-24459563)
chr2 (264-377)||(39016396-39016507)
chr2 (377-496)||(5089672-5089792)
chr2 (265-377)||(39015002-39015114)
chr2 (260-372)||(40000343-40000455)
chr2 (260-332)||(14704048-14704120)
chr2 (264-322)||(17466841-17466899)
chr2 (265-371)||(34037687-34037793)
chr2 (265-378)||(2911505-2911618)
chr2 (262-379)||(5915003-5915120)
chr2 (260-324)||(17466091-17466155)
chr2 (265-314)||(21733785-21733834)
chr2 (380-472)||(39959770-39959863)
chr2 (260-372)||(34582679-34582791)
chr2 (261-322)||(31814354-31814415)
chr2 (69-112)||(26910696-26910739)
chr2 (264-322)||(38985002-38985060)
chr2 (261-342)||(7412124-7412205)
chr2 (265-321)||(21732163-21732216)
chr2 (263-316)||(33161825-33161878)
chr2 (258-322)||(26586302-26586366)
[»] chr7 (41 HSPs)
chr7 (265-372)||(43457459-43457566)
chr7 (260-382)||(10899082-10899204)
chr7 (420-508)||(24529028-24529116)
chr7 (264-372)||(30925021-30925129)
chr7 (260-380)||(44334458-44334578)
chr7 (263-377)||(48777253-48777367)
chr7 (378-505)||(7357929-7358057)
chr7 (260-372)||(35729095-35729207)
chr7 (260-372)||(48647452-48647564)
chr7 (260-378)||(7258271-7258389)
chr7 (270-372)||(44333141-44333243)
chr7 (378-505)||(28291912-28292040)
chr7 (264-372)||(48646051-48646159)
chr7 (418-508)||(33226955-33227045)
chr7 (263-377)||(35727696-35727810)
chr7 (418-532)||(47762349-47762462)
chr7 (266-372)||(45583686-45583792)
chr7 (267-372)||(46286505-46286610)
chr7 (260-372)||(7259693-7259805)
chr7 (428-508)||(9973915-9973995)
chr7 (260-321)||(45584505-45584566)
chr7 (264-372)||(48788685-48788793)
chr7 (260-377)||(42477378-42477494)
chr7 (264-321)||(44530624-44530681)
chr7 (263-322)||(13578332-13578391)
chr7 (264-362)||(8374926-8375024)
chr7 (263-371)||(8375595-8375703)
chr7 (260-332)||(44529070-44529142)
chr7 (267-378)||(8048800-8048911)
chr7 (264-377)||(12223712-12223825)
chr7 (263-370)||(39708107-39708214)
chr7 (260-318)||(33607632-33607690)
chr7 (264-322)||(12220075-12220133)
chr7 (304-377)||(21062814-21062887)
chr7 (274-372)||(34704911-34705009)
chr7 (267-384)||(7509487-7509603)
chr7 (275-332)||(10894392-10894449)
chr7 (264-313)||(43461741-43461789)
chr7 (260-292)||(5930142-5930174)
chr7 (264-316)||(32793229-32793281)
chr7 (263-291)||(34888935-34888963)
[»] chr1 (32 HSPs)
chr1 (258-372)||(32665777-32665891)
chr1 (402-508)||(31289374-31289481)
chr1 (378-508)||(13891400-13891531)
chr1 (378-508)||(38734721-38734852)
chr1 (260-377)||(9339643-9339760)
chr1 (260-382)||(7945563-7945685)
chr1 (264-377)||(10333199-10333312)
chr1 (377-508)||(26650495-26650626)
chr1 (378-508)||(39746741-39746872)
chr1 (378-506)||(10106636-10106765)
chr1 (377-536)||(12179295-12179462)
chr1 (263-372)||(10332988-10333097)
chr1 (260-372)||(52439481-52439589)
chr1 (264-377)||(22856677-22856790)
chr1 (264-342)||(5783122-5783200)
chr1 (264-377)||(9341038-9341151)
chr1 (431-508)||(14582397-14582474)
chr1 (264-341)||(52440572-52440649)
chr1 (264-372)||(5782416-5782524)
chr1 (260-372)||(6612421-6612533)
chr1 (261-372)||(7944159-7944268)
chr1 (263-322)||(6613991-6614050)
chr1 (266-322)||(3117701-3117757)
chr1 (420-472)||(19406284-19406336)
chr1 (258-318)||(50107210-50107270)
chr1 (265-322)||(25037930-25037987)
chr1 (265-322)||(25043142-25043199)
chr1 (263-324)||(32664562-32664615)
chr1 (267-342)||(534574-534648)
chr1 (267-314)||(34088485-34088532)
chr1 (272-322)||(44020038-44020088)
chr1 (379-502)||(14724903-14725027)
[»] chr8 (24 HSPs)
chr8 (378-508)||(19430628-19430759)
chr8 (378-508)||(19566777-19566908)
chr8 (260-382)||(35177387-35177509)
chr8 (260-378)||(32898454-32898572)
chr8 (378-508)||(19436070-19436201)
chr8 (378-508)||(19572219-19572350)
chr8 (378-505)||(13584765-13584893)
chr8 (378-504)||(33616135-33616261)
chr8 (264-381)||(1952983-1953099)
chr8 (260-372)||(35178813-35178925)
chr8 (260-372)||(10407593-10407705)
chr8 (418-508)||(31031194-31031282)
chr8 (266-372)||(41754810-41754915)
chr8 (264-322)||(5965455-5965513)
chr8 (275-381)||(41753991-41754097)
chr8 (264-318)||(45476218-45476272)
chr8 (271-332)||(1951985-1952045)
chr8 (267-372)||(30134568-30134673)
chr8 (259-311)||(10406269-10406321)
chr8 (264-322)||(28619558-28619616)
chr8 (261-318)||(5736898-5736955)
chr8 (264-324)||(28524808-28524868)
chr8 (269-322)||(41121161-41121214)
chr8 (264-332)||(5738036-5738104)
[»] scaffold0034 (1 HSPs)
scaffold0034 (260-372)||(116057-116169)
[»] chr5 (32 HSPs)
chr5 (260-372)||(8074453-8074565)
chr5 (260-372)||(4592863-4592975)
chr5 (260-378)||(546045-546162)
chr5 (264-372)||(2464671-2464779)
chr5 (262-382)||(28591125-28591245)
chr5 (377-506)||(7805667-7805797)
chr5 (378-506)||(14374719-14374848)
chr5 (378-504)||(13582053-13582180)
chr5 (260-372)||(2466783-2466895)
chr5 (267-372)||(40612675-40612780)
chr5 (264-372)||(9538062-9538170)
chr5 (264-342)||(16611760-16611838)
chr5 (280-372)||(18400192-18400284)
chr5 (263-342)||(19182982-19183061)
chr5 (267-378)||(21069285-21069396)
chr5 (267-377)||(25590428-25590537)
chr5 (265-322)||(544700-544757)
chr5 (263-332)||(19186232-19186301)
chr5 (260-372)||(8075842-8075954)
chr5 (264-377)||(14891160-14891269)
chr5 (260-320)||(32641735-32641795)
chr5 (264-316)||(18004696-18004748)
chr5 (269-328)||(4594118-4594176)
chr5 (265-311)||(14881010-14881056)
chr5 (418-502)||(9361776-9361858)
chr5 (304-381)||(13651173-13651249)
chr5 (264-364)||(9537033-9537132)
chr5 (269-313)||(13483174-13483218)
chr5 (264-372)||(31947050-31947158)
chr5 (264-320)||(32640342-32640398)
chr5 (379-465)||(31987343-31987430)
chr5 (268-322)||(13483072-13483126)
[»] scaffold0011 (2 HSPs)
scaffold0011 (418-508)||(7516-7607)
scaffold0011 (378-508)||(2221-2353)
[»] scaffold0132 (2 HSPs)
scaffold0132 (418-508)||(2488-2578)
scaffold0132 (418-508)||(10448-10538)
[»] scaffold0039 (2 HSPs)
scaffold0039 (264-372)||(79075-79183)
scaffold0039 (269-371)||(74331-74433)
[»] scaffold0767 (1 HSPs)
scaffold0767 (258-322)||(5651-5715)


Alignment Details
Target: chr3 (Bit Score: 276; Significance: 1e-154; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 8 - 342
Target Start/End: Original strand, 11772807 - 11773142
Alignment:
Q  8 gttagcatgtgcgatataaagcatagataaacggaacaagtagtataatccatgctgctattggttctaaatattggcaacttgtttgagtaacataaac 107  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  11772807 gttagcatgtgtaatataaagcatagataaacggaacaagtagtataatccatgctgctattggttctaaatattggcaacttgtttgagtaacataaag 11772906  T
Q  108 attgatgttcatatgctttttactagttacctctcttaaatgtttgtattcctataaaaattcgttgaattaatatagctgttgcataaaatatctcctt 207  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  11772907 attgatgttcatatgctttttactatttacctctcttaaatgtttgtattcctataaacattcgttgaattaatatagctgttacataaaatatctcctt 11773006  T
Q  208 ttccatgagaccagtgtgcataaacggcaatggaagtaaatgaaacttaa-gccagggactaaagtgataacggaagtgcagagtcagaggcttatttgt 306  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||    
T  11773007 ttccatgagaccagtgtgcataaacagcaatggaagtaaatgcaacttaacgccagggactaaagtgataacggaagtgtagagtcagagacttatttgt 11773106  T
Q  307 atttaatcctgagtcaaggatctatgcgacagcgag 342  Q
    |||||||||||||||| ||| ||||| |||||||||    
T  11773107 atttaatcctgagtcagggacctatgtgacagcgag 11773142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 355 - 692
Target Start/End: Original strand, 11777148 - 11777486
Alignment:
Q  355 ggactaaagtgactatttcctcatttttctaagcgctcacccattcgcaaacgtgggtaccttagggcacacccttggaggtcaccctacccttatataa 454  Q
    ||||||||||||||||||||||||||||| |||| |||| ||||||||||| |||||||  | |||| ||  ||||||||||||||||||||||||||||    
T  11777148 ggactaaagtgactatttcctcatttttccaagcactcatccattcgcaaaagtgggtaaat-aggggactgccttggaggtcaccctacccttatataa 11777246  T
Q  455 acacttgctagttagtgtggctcaccaatgtaggacatttttaagtcacacac--tggttcttaccatgtgtttttctatccaacttccactagaatcaa 552  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||    
T  11777247 acacttgctagttagtgtggctcaccaatgtgggacatttttaagtcacacacactagttcttaccatgtgtttttctatccaacttccactagaatcaa 11777346  T
Q  553 cgagtgttccaacaattacccttacatatatatgaaaagagaatattttgatgaactggcttgcctctcaggagtgagttcaaattcaaatatttgtgga 652  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11777347 cgagtgttccaacaattacccttacatatatatgaaaagagaatattttaatgaactggcttgcctctcaggagtgagttccaattcaaatatttgtgga 11777446  T
Q  653 gactttctcattttaatttttggtccgttttaaatgagtg 692  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11777447 gactttctcattttaatttttggtccgttttaaatgagtg 11777486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 8 - 252
Target Start/End: Complemental strand, 11778604 - 11778360
Alignment:
Q  8 gttagcatgtgcgatataaagcatagataaacggaacaagtagtataatccatgctgctattggttctaaatattggcaacttgtttgagtaacataaac 107  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  11778604 gttagcatgtgtaatataaagcatagataaacggaacaagtagtataatccatgctgctattggttctaaatattggcaacttgtttgagtaacataaag 11778505  T
Q  108 attgatgttcatatgctttttactagttacctctcttaaatgtttgtattcctataaaaattcgttgaattaatatagctgttgcataaaatatctcctt 207  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11778504 attgatgtttatatgctttttactatttacctctcttaaatgttcgtattcctataaaaattcgttgaattaatatagctgttacataaaatatctcctt 11778405  T
Q  208 ttccatgagaccagtgtgcataaacggcaatggaagtaaatgaaa 252  Q
    || |||||||||||||||||||||| |||||||||||||||||||    
T  11778404 tttcatgagaccagtgtgcataaacagcaatggaagtaaatgaaa 11778360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 377 - 574
Target Start/End: Original strand, 26929306 - 26929506
Alignment:
Q  377 atttttctaagcgctcacccattcgcaaacgtgggtacctta-gggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggc 475  Q
    ||||||||||||||| |||| |||||||| |||||||||  | |||||||| |||||||||||||| ||||||||||||||||||||||||| ||||  |    
T  26929306 atttttctaagcgcttacccgttcgcaaaagtgggtaccccaagggcacacacttggaggtcaccccacccttatataaacacttgctagttggtgtaac 26929405  T
Q  476 tcaccaatgtaggacatttttaagtcacacactggttcttaccatgtgtttttctatccaa--cttccactagaatcaacgagtgttccaacaattaccc 573  Q
    ||||||||||   |||||||||||||||||||| ||||||||  | |||||||||||||||   ||  |||||||| ||| | |||||||||||||||||    
T  26929406 tcaccaatgtgaaacatttttaagtcacacactagttcttacattatgtttttctatccaattttttgactagaattaactaatgttccaacaattaccc 26929505  T
Q  574 t 574  Q
    |    
T  26929506 t 26929506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 418 - 566
Target Start/End: Original strand, 6025713 - 6025859
Alignment:
Q  418 agggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggctcaccaatgtaggacatttttaagtcacacactggttcttac 517  Q
    |||||||| ||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||  ||||||||||| ||||||||   || ||||    
T  6025713 agggcacatccttggaggtcaccccatccttatataaacacttgctagttagtgtgactcaccaatgtgagacatttttaaatcacacac--atttttac 6025810  T
Q  518 catgtgtttttctatccaacttccactagaatcaacgagtgttccaaca 566  Q
    | ||||||||||| |||||||||||||||||| ||| ||||||||||||    
T  6025811 cttgtgtttttctttccaacttccactagaattaactagtgttccaaca 6025859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 260 - 380
Target Start/End: Original strand, 17701928 - 17702048
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||| ||| ||||  |||||||||| |||||||||| ||||    
T  17701928 cagggactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcttgagtcagggacctatatgacagcgagctgcagaatcagagact 17702027  T
Q  360 aaagtgactatttcctcattt 380  Q
    ||||||||||||| |||||||    
T  17702028 aaagtgactatttactcattt 17702048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 260 - 382
Target Start/End: Complemental strand, 55388187 - 55388065
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    ||||||||||||||||||||| |||||||||||||   |||||||||||||||||||||||||  || ||||  |||||||||| |||||||||||||||    
T  55388187 cagggactaaagtgataacgggagtgcagagtcagtaacttatttgtatttaatcctgagtcagagacctatatgacagcgagctgcagaatcagggact 55388088  T
Q  360 aaagtgactatttcctcattttt 382  Q
    ||||||||||||| |||||||||    
T  55388087 aaagtgactatttgctcattttt 55388065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 260 - 372
Target Start/End: Complemental strand, 2591741 - 2591629
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    |||||||||||||||| | |||||||||||||||||| ||| ||||||||||||||||||||| ||| ||||| |||||| ||| |||||||||||||||    
T  2591741 cagggactaaagtgatcatggaagtgcagagtcagagacttgtttgtatttaatcctgagtcagggacctatgtgacagcaagctgcagaatcagggact 2591642  T
Q  360 aaagtgactattt 372  Q
    |||||||||||||    
T  2591641 aaagtgactattt 2591629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 260 - 379
Target Start/End: Original strand, 2592016 - 2592135
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    |||||||||||||||||||||||||   ||||||| | ||||||||||||||||||||||||| ||| ||||| |||||||||| ||||||| |||||||    
T  2592016 cagggactaaagtgataacggaagtattgagtcagggacttatttgtatttaatcctgagtcagggacctatgtgacagcgagctgcagaattagggact 2592115  T
Q  360 aaagtgactatttcctcatt 379  Q
    ||||||||||||| ||||||    
T  2592116 aaagtgactatttgctcatt 2592135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 263 - 372
Target Start/End: Complemental strand, 48573096 - 48572987
Alignment:
Q  263 ggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaa 362  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| || | ||||  ||||| |||||||| |||    
T  48573096 ggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcagggacctatgtgataacgaggtgcagagtcagggaccaaa 48572997  T
Q  363 gtgactattt 372  Q
    ||||||||||    
T  48572996 gtgactattt 48572987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 260 - 372
Target Start/End: Complemental strand, 36279066 - 36278954
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||| ||||| |||| ||||| | | |||||||||||    
T  36279066 cagggactaaaatgataacggaagtgcagagtcagagacttatttgtatttaatcctgaatcagggacctatgtgacaacgagctgtataatcagggact 36278967  T
Q  360 aaagtgactattt 372  Q
    |||||||||||||    
T  36278966 aaagtgactattt 36278954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 377 - 508
Target Start/End: Original strand, 53120115 - 53120247
Alignment:
Q  377 atttttctaagcgctcacccattcgcaaacgtgggtacctta-gggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggc 475  Q
    |||||| |||||| |||||  ||| |||| |||||||||  | |||||||||||||||||||||  ||||||||||||||||||| |||||| |||||||    
T  53120115 atttttgtaagcgttcacctgttcacaaaagtgggtaccccaagggcacacccttggaggtcactgtacccttatataaacactttctagttggtgtggc 53120214  T
Q  476 tcaccaatgtaggacatttttaagtcacacact 508  Q
    |||||||||| ||||||||||||||||||||||    
T  53120215 tcaccaatgtgggacatttttaagtcacacact 53120247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 418 - 508
Target Start/End: Complemental strand, 33088773 - 33088683
Alignment:
Q  418 agggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggctcaccaatgtaggacatttttaagtcacacact 508  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||| || |||||||||||||| ||||||||||||||||||||||    
T  33088773 agggcacacccttggaggtcactctacccttatataaacactttctagttggtttggctcaccaatgtgggacatttttaagtcacacact 33088683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 428 - 568
Target Start/End: Complemental strand, 21493795 - 21493654
Alignment:
Q  428 cttggaggtcaccctacccttatataaac-acttgctagttagtgtggctcaccaatgtaggacatttttaagtcacacactggttcttaccatgtgttt 526  Q
    |||||||||||||| |||||||||||||  | ||||||||| || |||||||| |||||  ||||||||||||||| ||||| ||| ||||| |||||||    
T  21493795 cttggaggtcaccccacccttatataaaatagttgctagtttgtttggctcacaaatgtgagacatttttaagtcaaacactagtttttaccttgtgttt 21493696  T
Q  527 ttctatccaacttccactagaatcaacgagtgttccaacaat 568  Q
    ||||||||||||||||||| ||| ||| |||||||| |||||    
T  21493695 ttctatccaacttccactataattaactagtgttccgacaat 21493654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 378 - 508
Target Start/End: Original strand, 13022644 - 13022775
Alignment:
Q  378 tttttctaagcgctcacccattcgcaaacgtgggtaccttaggg-cacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggct 476  Q
    ||||| |||||| |||||| ||| |||| |||||||||  | || |||||||||||||||||| || ||||||||||||||||| ||| || ||||||||    
T  13022644 tttttgtaagcgttcacccgttcacaaaagtgggtaccccaaggtcacacccttggaggtcactcttcccttatataaacactttctaattggtgtggct 13022743  T
Q  477 caccaatgtaggacatttttaagtcacacact 508  Q
    ||||||||| ||||||||||||||||||||||    
T  13022744 caccaatgtgggacatttttaagtcacacact 13022775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 260 - 372
Target Start/End: Complemental strand, 17700632 - 17700520
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| | | ||||| |||| ||||  ||||| |||  ||||    
T  17700632 cagggactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctgagtcaggaacctatgtgacaacgaggtgcagagtcaaagact 17700533  T
Q  360 aaagtgactattt 372  Q
    |||||||||||||    
T  17700532 aaagtgactattt 17700520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 260 - 380
Target Start/End: Original strand, 52318326 - 52318446
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    ||||||||||||| ||| | ||||||||||||||| | ||||||||||||||||||||||||| ||||||||| ||||||||   ||||| |||| |||     
T  52318326 cagggactaaagtaatatcagaagtgcagagtcagggacttatttgtatttaatcctgagtcagggatctatgtgacagcgaagtgcagagtcagagacc 52318425  T
Q  360 aaagtgactatttcctcattt 380  Q
    ||||||||||||| |||||||    
T  52318426 aaagtgactatttgctcattt 52318446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 418 - 533
Target Start/End: Original strand, 26962660 - 26962777
Alignment:
Q  418 agggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggctcaccaatgtaggacatttttaagt--cacacactggttctt 515  Q
    |||||||||||||| ||||||| |||||||||||||||||||| |||||| |||||||||||||||||  ||| |||||||||  |||||||| ||| ||    
T  26962660 agggcacacccttgaaggtcactctacccttatataaacactttctagttggtgtggctcaccaatgtgagacttttttaagtcacacacactagttttt 26962759  T
Q  516 accatgtgtttttctatc 533  Q
    ||  ||||||||||||||    
T  26962760 acattgtgtttttctatc 26962777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 260 - 372
Target Start/End: Complemental strand, 34263919 - 34263807
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    |||||| ||||||||||| ||||||| |||||||||| ||||||||||||||||||||| ||||||| || || |||||||||  ||||| |||||| |     
T  34263919 cagggattaaagtgataatggaagtgtagagtcagagacttatttgtatttaatcctgaatcaaggacctctgtgacagcgaggtgcagagtcaggggcc 34263820  T
Q  360 aaagtgactattt 372  Q
    |||||||||||||    
T  34263819 aaagtgactattt 34263807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 378 - 505
Target Start/End: Complemental strand, 38436468 - 38436340
Alignment:
Q  378 tttttctaagcgctcacccattcgcaaacgtgggtaccttagg-gcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggct 476  Q
    ||||| |||||| |||||| ||| |||| ||||||||| || | ||||||| |||| |||||| ||||||||||||||||||||  |||||  |||||||    
T  38436468 tttttgtaagcgttcacccgttcacaaaagtgggtaccctaagagcacacctttggtggtcactctacccttatataaacactttttagttgatgtggct 38436369  T
Q  477 caccaatgtaggacatttttaagtcacac 505  Q
    ||||||||| |||||||||||||||||||    
T  38436368 caccaatgtgggacatttttaagtcacac 38436340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 263 - 372
Target Start/End: Original strand, 45600951 - 45601059
Alignment:
Q  263 ggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaa 362  Q
    |||||||||||||||||||||||||||||||| | ||| ||||||||||||||||| ||| ||| ||||| |||||||||   |||| ||||||||||||    
T  45600951 ggactaaagtgataacggaagtgcagagtcag-gacttctttgtatttaatcctgaatcagggacctatgtgacagcgagggacagagtcagggactaaa 45601049  T
Q  363 gtgactattt 372  Q
    ||||| ||||    
T  45601050 gtgacgattt 45601059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 260 - 379
Target Start/End: Original strand, 47118060 - 47118179
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    |||||||||||||||||||| |||||||||||||||| ||| |||| |||||||||||||||  |||  |||  |||| ||||  ||||| |||||||||    
T  47118060 cagggactaaagtgataacgaaagtgcagagtcagagacttctttgcatttaatcctgagtcggggacttatatgacaacgaggtgcagagtcagggact 47118159  T
Q  360 aaagtgactatttcctcatt 379  Q
    |||||||| |||| ||||||    
T  47118160 aaagtgaccatttgctcatt 47118179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 36280326 - 36280388
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtca 322  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  36280326 cagggactaaagtgataacggaagtgcagagtcagagacttatttatatttaatcctgagtca 36280388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 262 - 372
Target Start/End: Original strand, 55389480 - 55389590
Alignment:
Q  262 gggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaa 361  Q
    |||||||||||||||||||||||| |||||||| | |||| |||||||||||  |||||||| || ||||| |||||||||  ||||| | |||||| ||    
T  55389480 gggactaaagtgataacggaagtgtagagtcagggacttaattgtatttaattttgagtcaatgacctatgtgacagcgaggtgcagagttagggaccaa 55389579  T
Q  362 agtgactattt 372  Q
    |||||||||||    
T  55389580 agtgactattt 55389590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 263 - 372
Target Start/End: Complemental strand, 52317090 - 52316981
Alignment:
Q  263 ggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaa 362  Q
    |||||||| |||||||||| ||||||||| | || ||||||||||||||||| |||||||  || ||||  |||||||||| |||||||||| |||||||    
T  52317090 ggactaaaatgataacggaggtgcagagttaaagacttatttgtatttaatcatgagtcagagacctatatgacagcgagctgcagaatcagagactaaa 52316991  T
Q  363 gtgactattt 372  Q
    |||| |||||    
T  52316990 gtgattattt 52316981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 262 - 360
Target Start/End: Complemental strand, 48808478 - 48808380
Alignment:
Q  262 gggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggacta 360  Q
    ||||||||||||| |||||||||||||||| ||   |||||||||||||||||||||||||  || ||||   ||||||||| ||||||||||||||||    
T  48808478 gggactaaagtgacaacggaagtgcagagttaggaacttatttgtatttaatcctgagtcagagacctatctaacagcgagctgcagaatcagggacta 48808380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 261 - 372
Target Start/End: Original strand, 19115157 - 19115267
Alignment:
Q  261 agggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggacta 360  Q
    |||||||||||| | ||||||||||||||||||  | ||| ||||||||||||||||||| ||||| ||||| |||| ||||  ||||| ||| | ||||    
T  19115157 agggactaaagtaaaaacggaagtgcagagtcat-gacttctttgtatttaatcctgagtgaaggacctatgtgacatcgaggtgcagagtcacgaacta 19115255  T
Q  361 aagtgactattt 372  Q
    ||||||||||||    
T  19115256 aagtgactattt 19115267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 263 - 378
Target Start/End: Original strand, 33428447 - 33428562
Alignment:
Q  263 ggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaa 362  Q
    |||||||||||| ||||||| ||||||||||  | ||| |||||||||||| |||||||| ||| ||||| |||| ||||  ||||| |||||||| |||    
T  33428447 ggactaaagtgacaacggaaatgcagagtcaaggacttctttgtatttaattctgagtcagggacctatgtgacaacgaggtgcagagtcagggacgaaa 33428546  T
Q  363 gtgactatttcctcat 378  Q
    ||||| |||| |||||    
T  33428547 gtgaccatttgctcat 33428562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 263 - 322
Target Start/End: Original strand, 48574471 - 48574530
Alignment:
Q  263 ggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtca 322  Q
    ||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||    
T  48574471 ggactaaagtgataacgaaagtgcagagtcagggacttatttgtatttaatcctgagtca 48574530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 260 - 371
Target Start/End: Complemental strand, 50753931 - 50753820
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    ||||||||||||||||||| |||||| |||||||||  ||| ||| ||||||||||||| | | ||| ||||| |||||||||  |||||   |||||||    
T  50753931 cagggactaaagtgataacagaagtgtagagtcagaaacttgtttatatttaatcctgaattagggacctatgtgacagcgaggtgcagagctagggact 50753832  T
Q  360 aaagtgactatt 371  Q
    ||||||||||||    
T  50753831 aaagtgactatt 50753820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 47075364 - 47075477
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaag 363  Q
    |||||||||||||||||||||| |||||||| || || ||||||||||||| ||||| | ||| ||||| |||| ||||  ||||| ||| ||| |||||    
T  47075364 gactaaagtgataacggaagtgtagagtcaggggtttctttgtatttaatcttgagtgacggacctatgtgacaacgaggtgcagagtcaaggattaaag 47075463  T
Q  364 tgactatttcctca 377  Q
    |||| |||| ||||    
T  47075464 tgaccatttgctca 47075477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 3671152 - 3671090
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtca 322  Q
    |||||| ||||||||||||||||||| ||||||| || |||||||||||||||| ||||||||    
T  3671152 cagggattaaagtgataacggaagtggagagtcatagacttatttgtatttaattctgagtca 3671090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 264 - 366
Target Start/End: Complemental strand, 19114643 - 19114541
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaag 363  Q
    |||||||||||||||||||||||| ||| || | ||| ||||||||||||| ||||||| ||| || || |||| |||   ||||| |||||||||||||    
T  19114643 gactaaagtgataacggaagtgcaaagttagtgacttctttgtatttaatcttgagtcagggacctctgtgacaacgaagtgcagagtcagggactaaag 19114544  T
Q  364 tga 366  Q
    |||    
T  19114543 tga 19114541  T

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Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 20464180 - 20464078
Alignment:
Q  263 ggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaa 362  Q
    |||||||||||||||| ||||||||||||||| | ||| ||||||||||||| |||| || ||| || || |||| ||||  ||||| || |||||||||    
T  20464180 ggactaaagtgataacagaagtgcagagtcagggacttctttgtatttaatcatgagccagggacctttgtgacaacgaggtgcagagtcggggactaaa 20464081  T
Q  363 gtg 365  Q
    |||    
T  20464080 gtg 20464078  T

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Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 279 - 372
Target Start/End: Complemental strand, 53957769 - 53957677
Alignment:
Q  279 ggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaagtgactattt 372  Q
    ||||||||||||||| || |||||||||||||| |||||||||| | | |||||  ||||||||  ||||||||| | ||||||||||||||||    
T  53957769 ggaagtgcagagtcatagacttatttgtattta-tcctgagtcaggaacctatgtaacagcgagttgcagaatcaagtactaaagtgactattt 53957677  T

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Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 428 - 508
Target Start/End: Original strand, 20811058 - 20811138
Alignment:
Q  428 cttggaggtcaccctacccttatataaacacttgctagttagtgtggctcaccaatgtaggacatttttaagtcacacact 508  Q
    |||||| ||||| ||||| ||||||||||||||  |||||  ||||| | |||||||| ||||||||||||||||||||||    
T  20811058 cttggaagtcactctacctttatataaacactttttagttgatgtggtttaccaatgtgggacatttttaagtcacacact 20811138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 265 - 332
Target Start/End: Complemental strand, 33427860 - 33427794
Alignment:
Q  265 actaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatg 332  Q
    ||||||||||||||| |||||||||||||| || | |||||||||||||||||| ||||||| |||||    
T  33427860 actaaagtgataacgaaagtgcagagtcag-ggttaatttgtatttaatcctgaatcaaggacctatg 33427794  T

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Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 53959113 - 53959171
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtca 322  Q
    ||||||||||||||||||||||||||||||    ||||||||||||||||| |||||||    
T  53959113 gactaaagtgataacggaagtgcagagtcatgaacttatttgtatttaatcatgagtca 53959171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 264 - 386
Target Start/End: Original strand, 49261550 - 49261668
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaag 363  Q
    ||||||||||||||||||| |||||||| |||| |   ||||||||||||||||||||| ||| ||||| |||| | |   |  |||| | |||||||||    
T  49261550 gactaaagtgataacggaaatgcagagttagagac---tttgtatttaatcctgagtcagggacctatgtgacaacaatgtgtggaattatggactaaag 49261646  T
Q  364 tgactatttcctcatttttctaa 386  Q
    ||||||||| ||| |||||||||    
T  49261647 tgactatttgctc-tttttctaa 49261668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 36827488 - 36827566
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgag 342  Q
    |||||||||||||||||||||| | | ||||||  |  ||| |||||||||||||||||||||||| ||  ||||||||    
T  36827488 gactaaagtgataacggaagtgtacattcagagattattttatatttaatcctgagtcaaggatctttgtcacagcgag 36827566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 342
Target Start/End: Complemental strand, 47427959 - 47427892
Alignment:
Q  275 taacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgag 342  Q
    ||||| ||||||| |||||| | ||| ||||||||||||  ||||||||||| ||||| |||||||||    
T  47427959 taacgtaagtgcacagtcagggacttctttgtatttaattttgagtcaaggacctatgtgacagcgag 47427892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 294
Target Start/End: Original strand, 48809666 - 48809697
Alignment:
Q  263 ggactaaagtgataacggaagtgcagagtcag 294  Q
    ||||||||||||||||||||||||||||||||    
T  48809666 ggactaaagtgataacggaagtgcagagtcag 48809697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 299 - 365
Target Start/End: Complemental strand, 19331183 - 19331117
Alignment:
Q  299 ttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaagtg 365  Q
    |||||||||||||||||||||||| ||| ||||| |||||| ||  ||||| ||||| || ||||||    
T  19331183 ttatttgtatttaatcctgagtcagggacctatgtgacagcaaggtgcagagtcaggaacgaaagtg 19331117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 261 - 291
Target Start/End: Complemental strand, 45599018 - 45598988
Alignment:
Q  261 agggactaaagtgataacggaagtgcagagt 291  Q
    |||||||||||||||||||||||||||||||    
T  45599018 agggactaaagtgataacggaagtgcagagt 45598988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 372
Target Start/End: Complemental strand, 40205992 - 40205883
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaag-gatctatgcgacagcgagcagcagaatcagggactaaa 362  Q
    ||||||| |||||||||||||||| | |||||| ||  ||||| ||||||| ||||||||| || || |  ||||||||||  |||| || |||||||||    
T  40205992 gactaaactgataacggaagtgcacattcagagactactttgtttttaatcgtgagtcaagagacctttatgacagcgagctacagagtccgggactaaa 40205893  T
Q  363 gtgactattt 372  Q
     |||| ||||    
T  40205892 atgaccattt 40205883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 4e-46; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 418 - 565
Target Start/End: Original strand, 13660432 - 13660581
Alignment:
Q  418 agggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggctcaccaatgtaggacatttttaagt--cacacactggttctt 515  Q
    |||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||| || || ||||||||||  |||||||| ||||||    
T  13660432 agggcacacctttggaggtcatcccacccttatataaacacttgctagttagtgtggctcaccaatataagatatttttaagtcacacacactagttctt 13660531  T
Q  516 accatgtgtttttctatccaacttccactagaatcaacgagtgttccaac 565  Q
    ||| | |||||||||||||||||||||||||||| ||| |||||||||||    
T  13660532 accttatgtttttctatccaacttccactagaattaactagtgttccaac 13660581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 378 - 536
Target Start/End: Original strand, 10485694 - 10485857
Alignment:
Q  378 tttttctaagcgctcacccattcgcaaacgtgggtacctta-gggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggct 476  Q
    |||||||||||||||||| ||||||||| || ||||||| | ||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||    
T  10485694 tttttctaagcgctcacctattcgcaaaagtaggtacctcaagggcacacccttggatgtcactctacccttatataaacacttgctagttggtgtggct 10485793  T
Q  477 caccaatgtaggacatttttaagt----cacacactggttcttaccatgtgtttttctatccaa 536  Q
    ||||||||| | ||||||||||||    |||||||| ||||||||  |||||||||||||||||    
T  10485794 caccaatgtggaacatttttaagtctcacacacactagttcttacattgtgtttttctatccaa 10485857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 422 - 566
Target Start/End: Complemental strand, 11956212 - 11956064
Alignment:
Q  422 cacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggctcaccaatgtaggacatttttaagt----cacacactggttcttac 517  Q
    |||| ||||| ||||||||| |||||||||||||||||| ||||||||||||||||||| |||| | ||||||||||||    |||||||| ||||||||    
T  11956212 cacatccttgtaggtcaccccacccttatataaacactttctagttagtgtggctcacctatgtggaacatttttaagtcatacacacactagttcttac 11956113  T
Q  518 catgtgtttttctatccaacttccactagaatcaacgagtgttccaaca 566  Q
    | ||  |||||||||||||||||||||||||||||| ||||||||||||    
T  11956112 cttgcatttttctatccaacttccactagaatcaactagtgttccaaca 11956064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 378 - 568
Target Start/End: Complemental strand, 17289802 - 17289605
Alignment:
Q  378 tttttctaagcgctcacccattcgcaaacgtgggtac-cttagggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggct 476  Q
    ||||| ||||||||||||  |||||||| |||||||  |  |||||||| ||||||| ||||| ||||||||||||||||||||||| ||| ||||||||    
T  17289802 tttttgtaagcgctcacctgttcgcaaaagtgggtagtccaagggcacatccttggatgtcactctacccttatataaacacttgcttgttggtgtggct 17289703  T
Q  477 caccaatgtaggacatttttaagtcac----acactggttcttaccatgtgtttttctatccaactt--ccactagaatcaacgagtgttccaacaat 568  Q
    ||||||||| |||||||||||||||||    ||||| ||||||||  ||||||||||||||||| ||   ||||||| ||||| ||||||||||||||    
T  17289702 caccaatgtgggacatttttaagtcacacacacactagttcttacattgtgtttttctatccaattttctcactagattcaactagtgttccaacaat 17289605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 377 - 508
Target Start/End: Original strand, 19478732 - 19478864
Alignment:
Q  377 atttttctaagcgctcacccattcgcaaacgtgggtacctta-gggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggc 475  Q
    |||||| |||||| |||||| ||| |||| |||||||||  | |||||||||||||||||| || |||||||||||||||||||| |||||| |||||||    
T  19478732 atttttgtaagcgttcacccgttcacaaaagtgggtaccccaagggcacacccttggaggttactctacccttatataaacactttctagttggtgtggc 19478831  T
Q  476 tcaccaatgtaggacatttttaagtcacacact 508  Q
    |||||||||| ||||||||||||||||||||||    
T  19478832 tcaccaatgtgggacatttttaagtcacacact 19478864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 418 - 536
Target Start/End: Original strand, 3902858 - 3902978
Alignment:
Q  418 agggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggctcaccaatgtaggacatttttaag--tcacacactggttctt 515  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||  ||||||||| |||||     
T  3902858 agggcacacccttggaggtcaccccacccttatataaacacttgctagttggtgtgattcaccaatgtaggacatttttaagtctcacacactagttctc 3902957  T
Q  516 accatgtgtttttctatccaa 536  Q
    ||   ||||||||||||||||    
T  3902958 acatagtgtttttctatccaa 3902978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 425 - 566
Target Start/End: Original strand, 29326239 - 29326383
Alignment:
Q  425 acccttggaggtcaccctacccttatataaacacttgctagttagtgtggctcaccaatgtaggacatttttaagtca--cacactggttcttaccatgt 522  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||  |||||||||||||||  ||||||  |||||||   ||    
T  29326239 acccttggaggtcaccccacccttatataaacacttgctagttggtgtgcctcaccaatgtgagacatttttaagtcacgcacactaattcttacatagt 29326338  T
Q  523 gtttttctatccaac-ttccactagaatcaacgagtgttccaaca 566  Q
    ||||||||||||||| || ||||||||| ||| ||||||||||||    
T  29326339 gtttttctatccaacttttcactagaattaactagtgttccaaca 29326383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 264 - 380
Target Start/End: Complemental strand, 30748109 - 30747993
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaag 363  Q
    |||||||||||||||| ||||| |||||||||| ||| ||||||||||||||| ||||| ||| ||||| |||||||||  |||||||||||||||||||    
T  30748109 gactaaagtgataacgaaagtgtagagtcagagacttgtttgtatttaatcctaagtcagggacctatgtgacagcgaggtgcagaatcagggactaaag 30748010  T
Q  364 tgactatttcctcattt 380  Q
    ||||||||| |||||||    
T  30748009 tgactatttgctcattt 30747993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 378 - 507
Target Start/End: Complemental strand, 17281055 - 17280925
Alignment:
Q  378 tttttctaagcgctcacccattcgcaaacgtgggtac-cttagggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggct 476  Q
    ||||| ||||||||||||| || ||||| |||||||| |  |||||||||||||||||||||| |||||||||||||||||||||||||||  | |||||    
T  17281055 tttttgtaagcgctcacccgtttgcaaaagtgggtacgcgaagggcacacccttggaggtcactctacccttatataaacacttgctagttgatatggct 17280956  T
Q  477 caccaatgtaggacatttttaagtcacacac 507  Q
    |||||||||   |||||||||||||||||||    
T  17280955 caccaatgtgaaacatttttaagtcacacac 17280925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 260 - 377
Target Start/End: Complemental strand, 31219069 - 31218952
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    |||||| ||||||||||||||||||||||||||||   ||| ||||||||||||||||||| ||||| ||||| |||||||||  ||||| |||| || |    
T  31219069 cagggattaaagtgataacggaagtgcagagtcaggaacttctttgtatttaatcctgagttaaggacctatgtgacagcgaggtgcagagtcagagatt 31218970  T
Q  360 aaagtgactatttcctca 377  Q
    |||||||| |||| ||||    
T  31218969 aaagtgaccatttgctca 31218952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 31219173 - 31219281
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaag 363  Q
    ||||||||||||||||||||||  |||||||   ||| ||||||||||||||||||| || || ||||| |||||||||  ||||| ||||||| |||||    
T  31219173 gactaaagtgataacggaagtgtcgagtcaggaacttctttgtatttaatcctgagttaatgacctatgtgacagcgaggtgcagagtcagggattaaag 31219272  T
Q  364 tgactattt 372  Q
    |||| ||||    
T  31219273 tgaccattt 31219281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 377 - 485
Target Start/End: Complemental strand, 28697035 - 28696923
Alignment:
Q  377 atttttctaagcgctcacccattcgcaaacgtgggtaccttagg-gcacacccttggaggtcaccctacccttatataa---acacttgctagttagtgt 472  Q
    |||||||||||||||||| | ||  |||| |||||||||  | | |||||||||| |||||||||| ||||||||||||   ||||||||||||| ||||    
T  28697035 atttttctaagcgctcactcgtttacaaaagtgggtaccccaagtgcacacccttagaggtcaccccacccttatataataaacacttgctagttggtgt 28696936  T
Q  473 ggctcaccaatgt 485  Q
     ||||||||||||    
T  28696935 tgctcaccaatgt 28696923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 260 - 372
Target Start/End: Complemental strand, 23508062 - 23507951
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    |||||||||||||||||| ||||||| | ||||| ||  || ||||||||||||||||| ||| | | ||||| ||||| |||  | || | ||| ||||    
T  23508062 cagggactaaagtgataaaggaagtgtaaagtcatagatttgtttgtatttaatcctgaatcaggaacctatgtgacagggaggtgtag-agcagagact 23507964  T
Q  360 aaagtgactattt 372  Q
    |||||||||||||    
T  23507963 aaagtgactattt 23507951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 470 - 508
Target Start/End: Complemental strand, 14450701 - 14450663
Alignment:
Q  470 tgtggctcaccaatgtaggacatttttaagtcacacact 508  Q
    ||||||||| |||||| ||||||||||||||||||||||    
T  14450701 tgtggctcatcaatgtgggacatttttaagtcacacact 14450663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 2e-45; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 378 - 568
Target Start/End: Original strand, 24490689 - 24490884
Alignment:
Q  378 tttttctaagcgctcacccattcgcaaacgtgggtacctta-gggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggct 476  Q
    |||||||||| |||||||| |||||||| || ||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  24490689 tttttctaagtgctcacccgttcgcaaatgtaggtacctcaagggcacacccttggaggtcactctacccttatataaacacttgctagttggtgtggct 24490788  T
Q  477 caccaatgtaggacatttttaagt--cacacactggttcttaccatgtgtttttctatccaactt--ccactagaatcaacgagtgttccaacaat 568  Q
    | ||||| | ||||||||||||||  |||||||| ||||||||  ||||||||||||||||| ||   ||||||| | ||| ||||||||||||||    
T  24490789 ctccaatatgggacatttttaagttacacacactagttcttacattgtgtttttctatccaattttctcactagatttaactagtgttccaacaat 24490884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 378 - 508
Target Start/End: Complemental strand, 10120004 - 10119873
Alignment:
Q  378 tttttctaagcgctcacccattcgcaaacgtgggtacctta-gggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggct 476  Q
    ||||| |||||| |||||| ||| |||| |||||||||  | ||| ||||||||||||||||| |||||||||||||||||||| |||||| ||||||||    
T  10120004 tttttgtaagcgttcacccgttcacaaaagtgggtaccccaagggtacacccttggaggtcactctacccttatataaacactttctagttggtgtggct 10119905  T
Q  477 caccaatgtaggacatttttaagtcacacact 508  Q
    ||||||||| ||||||||||||||||||||||    
T  10119904 caccaatgtgggacatttttaagtcacacact 10119873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 393 - 564
Target Start/End: Complemental strand, 10318360 - 10318188
Alignment:
Q  393 acccattcgcaaacgtgggtaccttagggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggctcaccaatgtaggacat 492  Q
    ||||||||| ||| |||||||||  | ||||||||||||||||||| || |||||||||||| |||||| ||||| |||||||||| ||||||  |||||    
T  10318360 acccattcgtaaaagtgggtaccccaaggcacacccttggaggtcatcccacccttatataatcacttgttagttggtgtggctcatcaatgtgagacat 10318261  T
Q  493 ttttaagtcacacactggttcttaccatgtgtttttctatccaac-ttccactagaatcaacgagtgttccaa 564  Q
    |||||| ||||||||| ||| ||||   ||||||||||||||||| || ||||||||| ||| || |||||||    
T  10318260 ttttaaatcacacactagttattacatagtgtttttctatccaacttttcactagaattaacaagggttccaa 10318188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 263 - 377
Target Start/End: Complemental strand, 47874675 - 47874561
Alignment:
Q  263 ggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaa 362  Q
    ||||||||||||||||||||||||||| |||| | ||||||||||||||||| ||||||| ||| ||||| || ||||||| |||||||||| |||||||    
T  47874675 ggactaaagtgataacggaagtgcagaatcagggacttatttgtatttaatcttgagtcagggacctatgtgatagcgagctgcagaatcagagactaaa 47874576  T
Q  363 gtgactatttcctca 377  Q
    |||||||||| ||||    
T  47874575 gtgactatttactca 47874561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 260 - 372
Target Start/End: Complemental strand, 42278163 - 42278051
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    |||||| ||||||||||||||||||||||||||||   |||||||||||||||||| |||||| ||| ||||| |||||| ||| ||||||||| |||||    
T  42278163 cagggattaaagtgataacggaagtgcagagtcaggaacttatttgtatttaatcccgagtcagggacctatgtgacagcaagctgcagaatcaaggact 42278064  T
Q  360 aaagtgactattt 372  Q
    |||||||||||||    
T  42278063 aaagtgactattt 42278051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 53771062 - 53771175
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaag 363  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||| ||| ||||| |||| ||||  ||||| |||||||||||||    
T  53771062 gactaaagtgataacggaagtgcagagtcaggggcttctttgtatttaattctgagtcagggacctatgtgacaacgaggtgcagagtcagggactaaag 53771161  T
Q  364 tgactatttcctca 377  Q
    |||| |||| ||||    
T  53771162 tgaccatttgctca 53771175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 263 - 372
Target Start/End: Original strand, 47878496 - 47878605
Alignment:
Q  263 ggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaa 362  Q
    ||||||||||||||||||||||| |||||||| | |||||||||||||||||| |||||| ||| |||||  ||||||||  ||||| |||||||  |||    
T  47878496 ggactaaagtgataacggaagtgtagagtcagggacttatttgtatttaatccagagtcagggacctatgtaacagcgaggtgcagagtcagggatcaaa 47878595  T
Q  363 gtgactattt 372  Q
    ||||||||||    
T  47878596 gtgactattt 47878605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 263 - 326
Target Start/End: Original strand, 26172954 - 26173017
Alignment:
Q  263 ggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaagga 326  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  26172954 ggactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcttgagtcaagga 26173017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 418 - 504
Target Start/End: Original strand, 653624 - 653710
Alignment:
Q  418 agggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggctcaccaatgtaggacatttttaagtcaca 504  Q
    |||||||||||||||||||||| || ||||||||||||||||| |||||| | ||| || |||||||| ||||||||||||||||||    
T  653624 agggcacacccttggaggtcactcttcccttatataaacacttactagttggggtgactaaccaatgtgggacatttttaagtcaca 653710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 475 - 566
Target Start/End: Complemental strand, 8082865 - 8082773
Alignment:
Q  475 ctcaccaatgtaggacatttttaagtcacacactggttcttaccatgtgtttttctatccaac-ttccactagaatcaacgagtgttccaaca 566  Q
    ||||||||||| || ||||||||||||||||||| ||||||||   ||||||||||||||||| || ||||||||| ||| ||||||||||||    
T  8082865 ctcaccaatgtggggcatttttaagtcacacactagttcttacatagtgtttttctatccaacttttcactagaattaactagtgttccaaca 8082773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 268 - 372
Target Start/End: Complemental strand, 31844828 - 31844724
Alignment:
Q  268 aaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaagtgac 367  Q
    |||||||||| ||||||| ||||| || | ||| ||||||||||||||||||||| ||| ||||| |||||||||  |||||   |||||||||||||||    
T  31844828 aaagtgataagggaagtgtagagttagggacttgtttgtatttaatcctgagtcagggacctatgtgacagcgaggtgcagagctagggactaaagtgac 31844729  T
Q  368 tattt 372  Q
    |||||    
T  31844728 tattt 31844724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 4703224 - 4703343
Alignment:
Q  258 gccagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcaggga 357  Q
    ||||| |||||||||||||||||||||| | ||||| || ||| |||||||||||| |||||| | ||| ||||| |||||||||  | ||| ||||  |    
T  4703224 gccagagactaaagtgataacggaagtgtacagtcaaagacttctttgtatttaattctgagttagggacctatgtgacagcgagatgtagagtcagtaa 4703323  T
Q  358 ctaaagtgactatttcctca 377  Q
    |||||||||| |||| ||||    
T  4703324 ctaaagtgacaatttgctca 4703343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 268 - 326
Target Start/End: Original strand, 54574822 - 54574880
Alignment:
Q  268 aaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaagga 326  Q
    ||||||||||| |||||||||||| ||||  ||||||||||||||||||||||||||||    
T  54574822 aaagtgataacagaagtgcagagttagagatttatttgtatttaatcctgagtcaagga 54574880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 264 - 372
Target Start/End: Complemental strand, 53770443 - 53770335
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaag 363  Q
    ||||| |||||||| ||||||||||||||| || ||| |||||||||||| |||||||| | | ||||| ||  |||||  ||||| |||| ||||||||    
T  53770443 gactagagtgataatggaagtgcagagtcatagacttctttgtatttaattctgagtcaggaacctatgtgaatgcgaggtgcagagtcagagactaaag 53770344  T
Q  364 tgactattt 372  Q
    |||| ||||    
T  53770343 tgaccattt 53770335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 267 - 342
Target Start/End: Complemental strand, 54574532 - 54574457
Alignment:
Q  267 taaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgag 342  Q
    ||||||||||||||||||||||||| |    |||||||||||||||||||||||||  || ||||| |||||||||    
T  54574532 taaagtgataacggaagtgcagagttaagaacttatttgtatttaatcctgagtcagagacctatgtgacagcgag 54574457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 264 - 314
Target Start/End: Complemental strand, 19050348 - 19050298
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatc 314  Q
    ||||||||||||||||||||||||||||| ||| ||| |||||||||||||    
T  19050348 gactaaagtgataacggaagtgcagagtccgagacttctttgtatttaatc 19050298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 264 - 381
Target Start/End: Complemental strand, 39869030 - 39868915
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaag 363  Q
    |||||||||||||||||||||||||||||  |  ||| ||||||||||||  ||||||| ||| || ||  ||||||||  ||||| |||| ||||||||    
T  39869030 gactaaagtgataacggaagtgcagagtcgaa--cttgtttgtatttaattatgagtcagggacctttgtaacagcgaggtgcagagtcagagactaaag 39868933  T
Q  364 tgactatttcctcatttt 381  Q
    | || |||| ||||||||    
T  39868932 taacaatttactcatttt 39868915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 260 - 372
Target Start/End: Original strand, 48740029 - 48740141
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    ||||||||||||||||||| ||||||||||||  | | ||| ||||||||||||  ||||||| ||||||| | ||||  |||  |||||  || |||||    
T  48740029 cagggactaaagtgataacagaagtgcagagttggggacttctttgtatttaattatgagtcagggatctacgtgacaatgaggtgcagagacatggact 48740128  T
Q  360 aaagtgactattt 372  Q
    |||||||| ||||    
T  48740129 aaagtgaccattt 48740141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 21621937 - 21621875
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtca 322  Q
    |||||||||||||||||||||||||||| | |||  | ||  |||||||||||||||||||||    
T  21621937 cagggactaaagtgataacggaagtgcacattcaatgactattttgtatttaatcctgagtca 21621875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 50694863 - 50694801
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtca 322  Q
    |||||||||||| ||||||||||||||||| |||||  ||||||| ||||||||  |||||||    
T  50694863 cagggactaaagagataacggaagtgcagaatcagaaacttatttatatttaattttgagtca 50694801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 314
Target Start/End: Complemental strand, 26170751 - 26170700
Alignment:
Q  263 ggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatc 314  Q
    ||||||||||||||| ||||||||||||| ||   |||||||||||||||||    
T  26170751 ggactaaagtgataatggaagtgcagagtaaggaacttatttgtatttaatc 26170700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 260 - 314
Target Start/End: Complemental strand, 4701879 - 4701825
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatc 314  Q
    ||||||||||||||||| |||||||||| |||| | | ||| |||||||||||||    
T  4701879 cagggactaaagtgatagcggaagtgcatagtcggggacttctttgtatttaatc 4701825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 268 - 382
Target Start/End: Original strand, 36453823 - 36453937
Alignment:
Q  268 aaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaagtgac 367  Q
    ||||||||| |  ||||| |||||||||||||| |||| |||||||||| | ||| ||| || ||  | ||||||  |||||||||  |||||||| |||    
T  36453823 aaagtgatagcaaaagtgaagagtcagaggcttctttgcatttaatcctaaatcagggacctttgtaatagcgagatgcagaatcaatgactaaagggac 36453922  T
Q  368 tatttcctcattttt 382  Q
     |||| |||||||||    
T  36453923 catttgctcattttt 36453937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 502
Target Start/End: Original strand, 17360069 - 17360194
Alignment:
Q  379 ttttctaagcgctca-cccattcgcaaacgtgggtacctta-gggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggct 476  Q
    ||||||||||||||| ||| |||| ||| |||||||||  | ||||||||| ||||| | |||||  |  ||||||||||| || |||| |||| || ||    
T  17360069 ttttctaagcgctcatcccgttcgtaaaagtgggtaccccaagggcacacctttggaagccaccccccatttatataaacatttactagatagtatgtct 17360168  T
Q  477 caccaatgtaggacatttttaagtca 502  Q
    |  |||||||||||||| ||||||||    
T  17360169 cttcaatgtaggacattcttaagtca 17360194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 89; Significance: 2e-42; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 377 - 568
Target Start/End: Complemental strand, 33498 - 33303
Alignment:
Q  377 atttttctaagcgctcacccattcgcaaacgtgggta-ccttagggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggc 475  Q
    |||||||||||||||||||| ||| |||| ||||||| ||  | ||||||||||||||| |||||| || |||||||||||||||||||||| |||||||    
T  33498 atttttctaagcgctcacccgttcacaaaagtgggtatcccaatggcacacccttggagctcaccccactcttatataaacacttgctagttggtgtggc 33399  T
Q  476 tcaccaatgtaggacatttttaagtcac--acactggttcttaccatgtgtttttctatccaa-cttccactagaatcaacgagtgttccaacaat 568  Q
    ||| |||||| |||||||||||||||||  ||||| ||||||||  |||||||||||||||||  || ||||||||| ||| ||| ||||||||||    
T  33398 tcatcaatgtgggacatttttaagtcacacacactagttcttacattgtgtttttctatccaatttttcactagaattaactagtattccaacaat 33303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 4e-40; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 422 - 566
Target Start/End: Complemental strand, 43111618 - 43111474
Alignment:
Q  422 cacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggctcaccaatgtaggacatttttaagtcacacactggttcttaccatg 521  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||| ||| | |||||||||||||||||||  |  |||||||| ||    
T  43111618 cacacccttgtaggtcaccccacccttatataaacacttgctagttggtgtggctcactaatatgggacatttttaagtcacacggtaattcttaccttg 43111519  T
Q  522 tgtttttctatccaacttccactagaatcaacgagtgttccaaca 566  Q
      |||||||||||||||||||||||||| ||| ||||||||||||    
T  43111518 catttttctatccaacttccactagaattaaccagtgttccaaca 43111474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 260 - 372
Target Start/End: Complemental strand, 31090278 - 31090166
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    ||||||||||| | ||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||| |||||||||| |||||||||||||||    
T  31090278 cagggactaaaatcataacggaagtgcagagtcagagacttatttatatttaatcctgagtcaaggacctatgtgacagcgagctgcagaatcagggact 31090179  T
Q  360 aaagtgactattt 372  Q
    ||| |||||||||    
T  31090178 aaattgactattt 31090166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 385 - 508
Target Start/End: Original strand, 42915165 - 42915289
Alignment:
Q  385 aagcgctcacccattcgcaaacgtgggtacctta-gggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggctcaccaat 483  Q
    ||||| |||||| ||| |||| |||||||||  | ||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||    
T  42915165 aagcgttcacccgttcacaaaagtgggtaccccaagggcacacccttggaggtcactctacccttatataaacactttctagttggtgtggctcaccaat 42915264  T
Q  484 gtaggacatttttaagtcacacact 508  Q
    || ||||||||||||||||||||||    
T  42915265 gtgggacatttttaagtcacacact 42915289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 263 - 372
Target Start/End: Original strand, 17330242 - 17330351
Alignment:
Q  263 ggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaa 362  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||| ||||| ||||| |||| ||||||||| ||||||||    
T  17330242 ggactaaagtgataacggaaatgcagagtcagagacttatttgtatttaatcctgagtcagggacctatgtgacagtgagctgcagaatcaaggactaaa 17330341  T
Q  363 gtgactattt 372  Q
    | ||||||||    
T  17330342 gcgactattt 17330351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 263 - 378
Target Start/End: Original strand, 32766251 - 32766366
Alignment:
Q  263 ggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaa 362  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||| ||||| |||| ||||  ||||| |||||||| |||    
T  32766251 ggactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctgagtcagggacctatgtgacaacgaggtgcagagtcagggaccaaa 32766350  T
Q  363 gtgactatttcctcat 378  Q
    |||||||||| |||||    
T  32766351 gtgactatttgctcat 32766366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 260 - 378
Target Start/End: Complemental strand, 32765052 - 32764934
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    |||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||  || ||||  |||| | ||| |||||||||||||||    
T  32765052 cagggattaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctgagtcagagacctatatgacaactagctgcagaatcagggact 32764953  T
Q  360 aaagtgactatttcctcat 378  Q
    ||||||||||||| |||||    
T  32764952 aaagtgactatttactcat 32764934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 260 - 372
Target Start/End: Complemental strand, 2910214 - 2910102
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    ||||||||||||||| || |||||||||||||||||| |||||||||||||||||| |||||| ||||||||| |||||||||| ||| |||||  ||||    
T  2910214 cagggactaaagtgacaaaggaagtgcagagtcagagacttatttgtatttaatcccgagtcagggatctatgtgacagcgagctgcaaaatcaaagact 2910115  T
Q  360 aaagtgactattt 372  Q
    ||||||| |||||    
T  2910114 aaagtgattattt 2910102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 31091540 - 31091648
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaag 363  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||| ||||| |||||| ||  ||||| |||||||| ||||    
T  31091540 gactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctgagtcagggacctatgtgacagcaaggtgcagagtcagggaccaaag 31091639  T
Q  364 tgactattt 372  Q
    |||||||||    
T  31091640 tgactattt 31091648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 260 - 372
Target Start/End: Complemental strand, 7073753 - 7073641
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||| || |||  || |||||||||||  ||| ||||||| | |||||    
T  7073753 cagggactaaagtgataacggaagtgcagaatcagagacttatttgtatttaatcccgaatcagagacctatgcgacagtaagctgcagaatgaaggact 7073654  T
Q  360 aaagtgactattt 372  Q
    |||||||||||||    
T  7073653 aaagtgactattt 7073641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 24458170 - 24458057
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaag 363  Q
    |||||||||||||||| ||||| |||||||||  ||||||||||||||||  ||||||| ||| ||||| || ||||||| ||| |||||||||||||||    
T  24458170 gactaaagtgataacgaaagtgtagagtcagaaacttatttgtatttaattttgagtcagggacctatgtgatagcgagctgcataatcagggactaaag 24458071  T
Q  364 tgactatttcctca 377  Q
    ||||||||| ||||    
T  24458070 tgactatttgctca 24458057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 260 - 368
Target Start/End: Original strand, 24459455 - 24459563
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    ||||||||||||||||||  ||||||||| ||||||| ||||||||||||||||||||| ||| ||| ||||| |||||||||  ||||| ||||||||     
T  24459455 cagggactaaagtgataatagaagtgcagggtcagagacttatttgtatttaatcctgattcagggacctatgtgacagcgagatgcagagtcagggacc 24459554  T
Q  360 aaagtgact 368  Q
    |||||||||    
T  24459555 aaagtgact 24459563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 39016396 - 39016507
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtca-ag-gatctatgcgacagcgagcagcagaatcagggactaa 361  Q
    |||||||||||||||||||||||||||| |    ||||||||||||||||||||||||| || ||| |||| |||||||||| |||||||||| ||||||    
T  39016396 gactaaagtgataacggaagtgcagagtga----cttatttgtatttaatcctgagtcagagagatgtatgtgacagcgagctgcagaatcagagactaa 39016491  T
Q  362 agtgactatttcctca 377  Q
    ||||||||||| ||||    
T  39016492 agtgactatttgctca 39016507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 377 - 496
Target Start/End: Original strand, 5089672 - 5089792
Alignment:
Q  377 atttttctaagcgctcacccattcgcaaacgtgggtacctta-gggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggc 475  Q
    |||||| |||||| |||||| ||| |||| |||||||| | | |||||||||||| |||||||| ||| |||||||||||||||| ||| || |||||||    
T  5089672 atttttgtaagcgttcacccgttcacaaaagtgggtacatcaagggcacacccttagaggtcactctatccttatataaacactttctaattggtgtggc 5089771  T
Q  476 tcaccaatgtaggacattttt 496  Q
    |||||||||| ||||||||||    
T  5089772 tcaccaatgtgggacattttt 5089792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 265 - 377
Target Start/End: Complemental strand, 39015114 - 39015002
Alignment:
Q  265 actaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaagt 364  Q
    |||||| |||||| | ||||||||||||| || | ||||||||||||||||||||||||||||||||| | |||||||  ||||| |||||||| |||||    
T  39015114 actaaaatgataatgaaagtgcagagtcaaagacgtatttgtatttaatcctgagtcaaggatctatgtggcagcgaggtgcagagtcagggacaaaagt 39015015  T
Q  365 gactatttcctca 377  Q
    || ||||| ||||    
T  39015014 gattatttgctca 39015002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 260 - 372
Target Start/End: Original strand, 40000343 - 40000455
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    |||||| |||||||||||||||||||||| || |||| ||||||||||||||||||| | ||| |||||||||  ||||||||  ||||| ||||||||     
T  40000343 cagggaataaagtgataacggaagtgcagggttagagacttatttgtatttaatcctcaatcagggatctatgtaacagcgaggtgcagagtcagggacc 40000442  T
Q  360 aaagtgactattt 372  Q
    |||||||| ||||    
T  40000443 aaagtgacaattt 40000455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 260 - 332
Target Start/End: Complemental strand, 14704120 - 14704048
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatg 332  Q
    |||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||| ||| |||||    
T  14704120 cagggactaaagtgataacggaagtgcagagtgagggacttatttgtatttaatcctgagtcagggacctatg 14704048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 17466841 - 17466899
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtca 322  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  17466841 gactaaagtgataacggaagtgcagagtcagagacttctttgtatttaatcctgagtca 17466899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 265 - 371
Target Start/End: Original strand, 34037687 - 34037793
Alignment:
Q  265 actaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaagt 364  Q
    |||||||||||||| |||||||||||||| || ||||||||||||||||||||||| | ||| || |  |||||| ||  ||||| ||| ||||||||||    
T  34037687 actaaagtgataacagaagtgcagagtcatagacttatttgtatttaatcctgagttatggacctttatgacagcaaggtgcagagtcaaggactaaagt 34037786  T
Q  365 gactatt 371  Q
    |||||||    
T  34037787 gactatt 34037793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 265 - 378
Target Start/End: Original strand, 2911505 - 2911618
Alignment:
Q  265 actaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaagt 364  Q
    ||||||||||||||||||||||| |||||||| ||||||| |||||||   ||||||| ||   |||| |||||||||| |||||| ||| ||| |||||    
T  2911505 actaaagtgataacggaagtgcaaagtcagagacttatttatatttaactttgagtcatggccttatgtgacagcgagctgcagaaccagagaccaaagt 2911604  T
Q  365 gactatttcctcat 378  Q
    |||||||| |||||    
T  2911605 gactatttgctcat 2911618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 262 - 379
Target Start/End: Original strand, 5915003 - 5915120
Alignment:
Q  262 gggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaa 361  Q
    |||| ||| ||||||||||||||||||||| || | ||| |||||||||||| ||||||||| || ||||  || ||||||  ||||| ||| |||||||    
T  5915003 gggattaaggtgataacggaagtgcagagttagtgacttctttgtatttaattctgagtcaaagacctatttgaaagcgaggtgcagagtcatggactaa 5915102  T
Q  362 agtgactatttcctcatt 379  Q
    ||||||||||| ||||||    
T  5915103 agtgactatttgctcatt 5915120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 260 - 324
Target Start/End: Complemental strand, 17466155 - 17466091
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaag 324  Q
    ||||||||||||||| |||||||||||||||||||||   | |||||||||||||||||||||||    
T  17466155 cagggactaaagtgaaaacggaagtgcagagtcagagatatctttgtatttaatcctgagtcaag 17466091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 265 - 314
Target Start/End: Original strand, 21733785 - 21733834
Alignment:
Q  265 actaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatc 314  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  21733785 actaaagtgatgacggaagtgcagagtcagagacttatttgtatttaatc 21733834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 380 - 472
Target Start/End: Original strand, 39959770 - 39959863
Alignment:
Q  380 tttctaagcgctcacccattcgcaaacgtgggtaccttaggg-cacacccttggaggtcaccctacccttatataaacacttgctagttagtgt 472  Q
    |||||||||| |||||| |||||||| | |||||||  | || |||||||||||||||||||| ||||||||||||||| ||| ||||| ||||    
T  39959770 tttctaagcgttcacccgttcgcaaaagcgggtaccccaaggacacacccttggaggtcaccccacccttatataaacatttgttagttggtgt 39959863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 260 - 372
Target Start/End: Original strand, 34582679 - 34582791
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    |||||||||||||||||||||||||||| | |||| | ||  |||||||||||||| ||||||| || || ||  ||||| ||  ||||| |||||||||    
T  34582679 cagggactaaagtgataacggaagtgcacattcagggactactttgtatttaatcccgagtcaatgacctttgtaacagcaaggtgcagagtcagggact 34582778  T
Q  360 aaagtgactattt 372  Q
    || ||||| ||||    
T  34582779 aacgtgaccattt 34582791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 261 - 322
Target Start/End: Original strand, 31814354 - 31814415
Alignment:
Q  261 agggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtca 322  Q
    ||||||||||||||||||||||||||||||||| |  ||| ||| |||||||| ||||||||    
T  31814354 agggactaaagtgataacggaagtgcagagtcaaaaacttctttatatttaattctgagtca 31814415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 69 - 112
Target Start/End: Original strand, 26910696 - 26910739
Alignment:
Q  69 tggttctaaatattggcaacttgtttgagtaacataaacattga 112  Q
    |||||||||||||||| ||||||||||||||||||||| |||||    
T  26910696 tggttctaaatattggaaacttgtttgagtaacataaagattga 26910739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 38985002 - 38985060
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtca 322  Q
    ||||||||||||||||||||||||||||||  | ||| |||||||||||| | ||||||    
T  38985002 gactaaagtgataacggaagtgcagagtcaaggacttctttgtatttaattccgagtca 38985060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 261 - 342
Target Start/End: Complemental strand, 7412205 - 7412124
Alignment:
Q  261 agggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgag 342  Q
    |||||||||||||||||||||||||||   |||| | ||| ||| ||||||||| |||||||  |||||||| |||| ||||    
T  7412205 agggactaaagtgataacggaagtgcactatcagtgacttctttatatttaatcttgagtcagagatctatgtgacaacgag 7412124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 21732216 - 21732163
Alignment:
Q  265 actaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtc 321  Q
    |||||||| ||||||||||| ||||||||    ||||||||||||||||||||||||    
T  21732216 actaaagtaataacggaagtacagagtcaa---cttatttgtatttaatcctgagtc 21732163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 33161878 - 33161825
Alignment:
Q  263 ggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcct 316  Q
    |||||||||||||||||||||| || |||| ||| ||| |||| ||||||||||    
T  33161878 ggactaaagtgataacggaagtacatagtctgagacttctttgcatttaatcct 33161825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 26586302 - 26586366
Alignment:
Q  258 gccagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtca 322  Q
    ||||| |||||||||||||||||||||||| | ||| || ||  ||| ||||||||| |||||||    
T  26586302 gccagagactaaagtgataacggaagtgcacattcaaagactactttatatttaatcttgagtca 26586366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 1e-39; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 265 - 372
Target Start/End: Complemental strand, 43457566 - 43457459
Alignment:
Q  265 actaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaagt 364  Q
    |||||||||||||||||||||||||||| | | ||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||    
T  43457566 actaaagtgataacggaagtgcagagtcggggacttatttgtatttaatcctgagtcagggacctatgcgacagcgagctgcagaatcagggactaaagt 43457467  T
Q  365 gactattt 372  Q
    ||||||||    
T  43457466 gactattt 43457459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 260 - 382
Target Start/End: Original strand, 10899082 - 10899204
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||  ||||| ||||||||     
T  10899082 cagggactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcctgggtcaaggatctatgtgacagcgaggtgcagagtcagggacc 10899181  T
Q  360 aaagtgactatttcctcattttt 382  Q
    ||||| || |||| |||||||||    
T  10899182 aaagtaacaatttactcattttt 10899204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 420 - 508
Target Start/End: Original strand, 24529028 - 24529116
Alignment:
Q  420 ggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggctcaccaatgtaggacatttttaagtcacacact 508  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||    
T  24529028 ggcacacccttggaggtcactctacccttatataaacactttctagttggtgtggctcaccaatgtaggatatttttaagtcacacact 24529116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 30925021 - 30925129
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaag 363  Q
    ||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| ||| | |||| ||||||||||||| |||||    
T  30925021 gactaaagtaataacggaagtgcatagtcagagacttatttgtatttaatcctgagtcaaggacctatgtgactgggagctgcagaatcagggattaaag 30925120  T
Q  364 tgactattt 372  Q
    |||||||||    
T  30925121 tgactattt 30925129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 260 - 380
Target Start/End: Original strand, 44334458 - 44334578
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    |||||||||||||||||| |||||||||||||||| | ||||||| ||||||||| ||||||| ||| |||||  ||||||||| ||||||||||| |||    
T  44334458 cagggactaaagtgataatggaagtgcagagtcagggacttatttatatttaatcatgagtcagggacctatgtaacagcgagctgcagaatcaggaact 44334557  T
Q  360 aaagtgactatttcctcattt 380  Q
    ||||||||||||| |||||||    
T  44334558 aaagtgactatttgctcattt 44334578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 263 - 377
Target Start/End: Complemental strand, 48777367 - 48777253
Alignment:
Q  263 ggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaa 362  Q
    |||||||||||||||||||||||||||||||| |  |||||||||||||||| ||||||| |||  |||| |||||||||| |||||||||| |||||||    
T  48777367 ggactaaagtgataacggaagtgcagagtcagggaattatttgtatttaatcatgagtcagggacttatgtgacagcgagctgcagaatcagagactaaa 48777268  T
Q  363 gtgactatttcctca 377  Q
    |||||||||| ||||    
T  48777267 gtgactatttgctca 48777253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 378 - 505
Target Start/End: Original strand, 7357929 - 7358057
Alignment:
Q  378 tttttctaagcgctcacccattcgcaaacgtgggtacctta-gggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggct 476  Q
    ||||| |||||| |||||| ||| |||| |||||||||| | ||||||| ||||||||||||| |||||||||||||||||||| ||| || ||||||||    
T  7357929 tttttgtaagcgttcacccgttcacaaaagtgggtacctcaagggcacatccttggaggtcactctacccttatataaacactttctaattggtgtggct 7358028  T
Q  477 caccaatgtaggacatttttaagtcacac 505  Q
    ||||||| | |||||||||||||||||||    
T  7358029 caccaatatgggacatttttaagtcacac 7358057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 260 - 372
Target Start/End: Original strand, 35729095 - 35729207
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    ||||||||| ||||||| ||||||||||||||||| | ||||||||||| ||||||| ||||||||| ||||| |||||||||| ||| ||||||||| |    
T  35729095 cagggactacagtgatagcggaagtgcagagtcagtgacttatttgtatgtaatcctaagtcaaggacctatgtgacagcgagctgcaaaatcagggaat 35729194  T
Q  360 aaagtgactattt 372  Q
    |||||||||||||    
T  35729195 aaagtgactattt 35729207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 260 - 372
Target Start/End: Original strand, 48647452 - 48647564
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    |||||||||||||||||||  ||||||||||| |||| ||||||||||||||||||||||||| ||| ||||| || ||||||| | |||||||||| ||    
T  48647452 cagggactaaagtgataacaaaagtgcagagtgagagacttatttgtatttaatcctgagtcagggacctatgtgatagcgagctgtagaatcagggtct 48647551  T
Q  360 aaagtgactattt 372  Q
    |||||||||||||    
T  48647552 aaagtgactattt 48647564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 260 - 378
Target Start/End: Complemental strand, 7258389 - 7258271
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| | ||| ||||| |||| ||||  | ||| ||||||||     
T  7258389 cagggactaaagtgataacagaagtgcagagtcagagacttatttgtatttaatcctgagttagggacctatgtgacaacgaggtgtagagtcagggacc 7258290  T
Q  360 aaagtgactatttcctcat 378  Q
    ||||||||||||| |||||    
T  7258289 aaagtgactatttgctcat 7258271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 270 - 372
Target Start/End: Complemental strand, 44333243 - 44333141
Alignment:
Q  270 agtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaagtgacta 369  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||| ||||| |||||||||  ||||| |||||||| ||||||||||    
T  44333243 agtgataacggaagtgcagagtcagagacttatttgtatttaatcatgagtcagggacctatgtgacagcgaggtgcagagtcagggaccaaagtgacta 44333144  T
Q  370 ttt 372  Q
    |||    
T  44333143 ttt 44333141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 378 - 505
Target Start/End: Complemental strand, 28292040 - 28291912
Alignment:
Q  378 tttttctaagcgctcacccattcgcaaacgtgggtacctta-gggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggct 476  Q
    ||||| |||||| |||||| ||| |||| |||||||||  | |||||||||||||||||||||  ||||||||||||||||||| |||||| |||| |||    
T  28292040 tttttgtaagcgttcacccgttcacaaaagtgggtaccccaagggcacacccttggaggtcactatacccttatataaacactttctagttggtgtagct 28291941  T
Q  477 caccaatgtaggacatttttaagtcacac 505  Q
    ||||||| | |||||||||||||||||||    
T  28291940 caccaatatgggacatttttaagtcacac 28291912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 264 - 372
Target Start/End: Complemental strand, 48646159 - 48646051
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaag 363  Q
    |||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||| ||| ||||| |||||||||  ||| | |||||||| ||||    
T  48646159 gactaaagtgataacggaagtgtagagtcagggacttatttgtatttaatcctgagtcagggacctatgtgacagcgaggtgcatagtcagggaccaaag 48646060  T
Q  364 tgactattt 372  Q
    |||||||||    
T  48646059 tgactattt 48646051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 418 - 508
Target Start/End: Original strand, 33226955 - 33227045
Alignment:
Q  418 agggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggctcaccaatgtaggacatttttaagtcacacact 508  Q
    ||||||||| |||||||||||| |||||||||||||||||||| |||||| ||||| ||||||||||| | ||||||||||||||||||||    
T  33226955 agggcacactcttggaggtcactctacccttatataaacactttctagttggtgtgactcaccaatgtggaacatttttaagtcacacact 33227045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 263 - 377
Target Start/End: Complemental strand, 35727810 - 35727696
Alignment:
Q  263 ggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaa 362  Q
    ||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||| ||| ||||| |||||||||  ||||| |||||||  |||    
T  35727810 ggactaaagtgataacggatgtgcagagtcagagacttatttatatttaatcctgagtcagggacctatgtgacagcgaggtgcagagtcagggatcaaa 35727711  T
Q  363 gtgactatttcctca 377  Q
    |||||| ||| ||||    
T  35727710 gtgactgtttgctca 35727696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 418 - 532
Target Start/End: Original strand, 47762349 - 47762462
Alignment:
Q  418 agggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggctcaccaatgtaggacatttttaagtcacacactggttcttac 517  Q
    |||||||| ||||||||||||||| ||| ||||||||||| || |||||| ||||||||||| ||||| | |||||||||||||||||||| ||||||||    
T  47762349 agggcacatccttggaggtcaccc-acctttatataaacatttactagttggtgtggctcactaatgtggaacatttttaagtcacacactagttcttac 47762447  T
Q  518 catgtgtttttctat 532  Q
      |||||||||||||    
T  47762448 attgtgtttttctat 47762462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 266 - 372
Target Start/End: Complemental strand, 45583792 - 45583686
Alignment:
Q  266 ctaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaagtg 365  Q
    |||||||||||||||||||||||| ||||   ||||| |||||||||| |||||||| ||| ||||| || ||||| | |||||||||||||||||||||    
T  45583792 ctaaagtgataacggaagtgcagaatcaggaacttatctgtatttaattctgagtcagggacctatgtgatagcgaactgcagaatcagggactaaagtg 45583693  T
Q  366 actattt 372  Q
    |||||||    
T  45583692 actattt 45583686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 267 - 372
Target Start/End: Complemental strand, 46286610 - 46286505
Alignment:
Q  267 taaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaagtga 366  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||| || |   ||||||||  | ||| ||||||||||||||||    
T  46286610 taaagtgataacagaagtgcagagtcagagacttatttgtatttaatcctgagtcagggacctttctaacagcgagatgaagagtcagggactaaagtga 46286511  T
Q  367 ctattt 372  Q
    ||||||    
T  46286510 ctattt 46286505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 260 - 372
Target Start/End: Original strand, 7259693 - 7259805
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    |||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||| |||  || | ||| ||||||||||  || |||||| || |    
T  7259693 cagggactaaagtgataacggaagtgtagagtcagggacttatttgtatttaatcctgaatcagagacccatgtgacagcgagctacaaaatcagcgatt 7259792  T
Q  360 aaagtgactattt 372  Q
    |||||||||||||    
T  7259793 aaagtgactattt 7259805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 428 - 508
Target Start/End: Original strand, 9973915 - 9973995
Alignment:
Q  428 cttggaggtcaccctacccttatataaacacttgctagttagtgtggctcaccaatgtaggacatttttaagtcacacact 508  Q
    |||||||||||| |||||||||||| |||| || |||||| ||||||||||||||||| ||||||||||||||||||||||    
T  9973915 cttggaggtcactctacccttatattaacaatttctagttggtgtggctcaccaatgtgggacatttttaagtcacacact 9973995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 45584505 - 45584566
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtc 321  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  45584505 cagggactaaagtgataacggaagtgcagagtcattggcttatttgtatttaatcctgagtc 45584566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 48788685 - 48788793
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaag 363  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||  ||||||| ||| ||||| |||||||||  ||| | ||| |||  ||||    
T  48788685 gactaaagtgataacggaagtgcagagtcagagacttatttatatttaattatgagtcagggacctatgtgacagcgaggtgcaaagtcaaggatcaaag 48788784  T
Q  364 tgactattt 372  Q
    |||||||||    
T  48788785 tgactattt 48788793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 260 - 377
Target Start/End: Complemental strand, 42477494 - 42477378
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    |||||| |||| ||||||||||||||||||||||| | |||||||||||||||||||||||||  || |||||||||| ||||  ||||| ||| ||||     
T  42477494 cagggattaaaatgataacggaagtgcagagtcag-gacttatttgtatttaatcctgagtcagagacctatgcgacaacgaggtgcagagtcaaggacc 42477396  T
Q  360 aaagtgactatttcctca 377  Q
    ||| ||| ||||| ||||    
T  42477395 aaattgattatttgctca 42477378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 44530624 - 44530681
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtc 321  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  44530624 gactaaagtgataacggaagtgcagagtcagagacttatttatatttaatcctgagtc 44530681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 263 - 322
Target Start/End: Original strand, 13578332 - 13578391
Alignment:
Q  263 ggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtca 322  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||    
T  13578332 ggactaaagtgataacggaagtgcagagtcagtgacttatttgtatttaattctgagtca 13578391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 264 - 362
Target Start/End: Complemental strand, 8375024 - 8374926
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaa 362  Q
    |||||||||||||||||||||||| | |||||  ||| |||||||||||| ||||||||  || ||||| |||||||||  ||||| ||||||||||||    
T  8375024 gactaaagtgataacggaagtgcaaaatcagaaacttttttgtatttaattctgagtcagagacctatgtgacagcgaggtgcagagtcagggactaaa 8374926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 263 - 371
Target Start/End: Original strand, 8375595 - 8375703
Alignment:
Q  263 ggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaa 362  Q
    |||||||| ||||||||||||||||||||||||  ||| ||||||||||||| ||||||| ||| ||||| ||||| | |  ||  | |||||||||||     
T  8375595 ggactaaattgataacggaagtgcagagtcagaaacttctttgtatttaatcatgagtcagggacctatgtgacagtgcggtgcgaagtcagggactaat 8375694  T
Q  363 gtgactatt 371  Q
    |||||||||    
T  8375695 gtgactatt 8375703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 260 - 332
Target Start/End: Complemental strand, 44529142 - 44529070
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatg 332  Q
    ||||||||||||||||||| ||||||  ||||| ||| ||||||||||||||||| ||||||| |||||||||    
T  44529142 cagggactaaagtgataacagaagtgttgagtcggagacttatttgtatttaatcatgagtcagggatctatg 44529070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 267 - 378
Target Start/End: Original strand, 8048800 - 8048911
Alignment:
Q  267 taaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaagtga 366  Q
    |||||||||||||||||||||||||| ||| ||| ||||||||||||| |||||||  || || || | |||||||  ||||| |||| |  ||||||||    
T  8048800 taaagtgataacggaagtgcagagtcggagacttctttgtatttaatcttgagtcagagacctttgtgtcagcgaggtgcagagtcagagggtaaagtga 8048899  T
Q  367 ctatttcctcat 378  Q
    |||||| |||||    
T  8048900 ctatttgctcat 8048911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 12223712 - 12223825
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaag 363  Q
    ||||||||| ||||||||| ||||||||||| | ||| ||| ||||||||||||||||| ||| ||||| ||||  ||   ||||  |||||||||||||    
T  12223712 gactaaagtaataacggaactgcagagtcagggacttctttatatttaatcctgagtcagggacctatgtgacattgatgtgcagtgtcagggactaaag 12223811  T
Q  364 tgactatttcctca 377  Q
    |||| |||| ||||    
T  12223812 tgaccattttctca 12223825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 263 - 370
Target Start/End: Complemental strand, 39708214 - 39708107
Alignment:
Q  263 ggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaa 362  Q
    ||||||||||||||||||||||||| |||| | | ||| |||||||| |||| ||||||| ||| || || ||| |||||   |||| |||| |||||||    
T  39708214 ggactaaagtgataacggaagtgcaaagtcggtgacttctttgtattcaatcttgagtcatggacctttgtgacggcgaggtacagagtcagagactaaa 39708115  T
Q  363 gtgactat 370  Q
    ||||||||    
T  39708114 gtgactat 39708107  T

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Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 260 - 318
Target Start/End: Original strand, 33607632 - 33607690
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctga 318  Q
    ||||| ||||| |||||||||||||||||| |||||| ||| |||||||||||||||||    
T  33607632 cagggtctaaaatgataacggaagtgcagaatcagagacttctttgtatttaatcctga 33607690  T

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Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 12220133 - 12220075
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtca 322  Q
    ||||||||||||| | ||||||||||||||||| ||| ||| ||||||||| |||||||    
T  12220133 gactaaagtgatatcagaagtgcagagtcagagacttctttctatttaatcttgagtca 12220075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 304 - 377
Target Start/End: Complemental strand, 21062887 - 21062814
Alignment:
Q  304 tgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaagtgactatttcctca 377  Q
    ||||||||||||||||||||||| || |  |||||||||  ||| | ||||||||||||||||| |||| ||||    
T  21062887 tgtatttaatcctgagtcaaggacctttatgacagcgaggtgcaaagtcagggactaaagtgaccattttctca 21062814  T

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Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 274 - 372
Target Start/End: Complemental strand, 34705009 - 34704911
Alignment:
Q  274 ataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaagtgactattt 372  Q
    |||||| |||| || |||||||| ||| |||||||||||||||||||||  |  || || |||| ||||  ||||| || | |||||||||||||||||    
T  34705009 ataacgaaagtacacagtcagagacttctttgtatttaatcctgagtcagaggcctttgtgacaacgaggtgcagagtcggagactaaagtgactattt 34704911  T

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Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 384
Target Start/End: Original strand, 7509487 - 7509603
Alignment:
Q  267 taaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaagtga 366  Q
    |||||| |||||||||||||||| || ||| ||| ||| ||||||||| ||| |||| || || || |||| ||||  | | ||||| ||| | ||||||    
T  7509487 taaagtaataacggaagtgcagaatctgagacttctttatatttaatcatgaatcaaagacctttgtgacaacgaggtgtataatcatgga-ttaagtga 7509585  T
Q  367 ctatttcctcatttttct 384  Q
    |||||| |||||||||||    
T  7509586 ctattttctcatttttct 7509603  T

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Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 10894449 - 10894392
Alignment:
Q  275 taacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatg 332  Q
    ||||||||||||||| | |||| ||||||| ||||||||| ||||||| ||| |||||    
T  10894449 taacggaagtgcagaattagagacttatttatatttaatcttgagtcagggacctatg 10894392  T

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Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 313
Target Start/End: Original strand, 43461741 - 43461789
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaat 313  Q
    |||||||||||||||||||||||| ||||| |  ||||||||||||||||    
T  43461741 gactaaagtgataacggaagtgcatagtca-aaacttatttgtatttaat 43461789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 260 - 292
Target Start/End: Original strand, 5930142 - 5930174
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtc 292  Q
    |||||||||||||||||||||||||||| ||||    
T  5930142 cagggactaaagtgataacggaagtgcacagtc 5930174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 32793281 - 32793229
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcct 316  Q
    ||||||||||||||| ||| |||||| |||  | |||||||||||||||||||    
T  32793281 gactaaagtgataaccgaaatgcagaatcaatgacttatttgtatttaatcct 32793229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 263 - 291
Target Start/End: Original strand, 34888935 - 34888963
Alignment:
Q  263 ggactaaagtgataacggaagtgcagagt 291  Q
    |||||||||||||||||||||||||||||    
T  34888935 ggactaaagtgataacggaagtgcagagt 34888963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 6e-39; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 258 - 372
Target Start/End: Original strand, 32665777 - 32665891
Alignment:
Q  258 gccagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcaggga 357  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||  || ||||| |||||||||| |||||||||||||    
T  32665777 gccagggactaaagtgataacggaagtgcagagtcaaagacttatttgtatttaatcatgagtcagagacctatgtgacagcgagctgcagaatcaggga 32665876  T
Q  358 ctaaagtgactattt 372  Q
    |||||||||||||||    
T  32665877 ctaaagtgactattt 32665891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 402 - 508
Target Start/End: Original strand, 31289374 - 31289481
Alignment:
Q  402 caaacgtgggtacctta-gggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggctcaccaatgtaggacatttttaagt 500  Q
    |||| ||||||||| || ||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||    
T  31289374 caaaagtgggtaccctaagggcacacccttggaggtcactctacccttatataaacactttctagttggtgtggctcaccaatgtgggacatttttaagt 31289473  T
Q  501 cacacact 508  Q
    ||||||||    
T  31289474 cacacact 31289481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 378 - 508
Target Start/End: Original strand, 13891400 - 13891531
Alignment:
Q  378 tttttctaagcgctcacccattcgcaaacgtgggtacctta-gggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggct 476  Q
    ||||| |||||  |||||| ||| |||| |||||||||| | ||||||| ||||||||||||| || ||||||||||||||||| |||||| ||||||||    
T  13891400 tttttgtaagcattcacccgttcacaaaagtgggtacctcaagggcacatccttggaggtcactcttcccttatataaacactttctagttggtgtggct 13891499  T
Q  477 caccaatgtaggacatttttaagtcacacact 508  Q
    ||||||||| ||||||||||||||||||||||    
T  13891500 caccaatgtgggacatttttaagtcacacact 13891531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 378 - 508
Target Start/End: Original strand, 38734721 - 38734852
Alignment:
Q  378 tttttctaagcgctcacccattcgcaaacgtgggta-ccttagggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggct 476  Q
    ||||| |||||| |||||| ||| |||| ||||||| ||| |||||||||| ||| ||||||| |||||||||||||||||||| |||||| ||||||||    
T  38734721 tttttgtaagcgttcacccgttcacaaaagtgggtatcctaagggcacacctttgaaggtcactctacccttatataaacactttctagttggtgtggct 38734820  T
Q  477 caccaatgtaggacatttttaagtcacacact 508  Q
    ||||||| | ||||||||||||||||||||||    
T  38734821 caccaatatgggacatttttaagtcacacact 38734852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 260 - 377
Target Start/End: Complemental strand, 9339760 - 9339643
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    ||||||||||||||||||||||||||||||||| | |  |||||||||||||||||||||||| ||| |||||  ||| ||||| |||||||||||||||    
T  9339760 cagggactaaagtgataacggaagtgcagagtcggggatttatttgtatttaatcctgagtcagggacctatgtaacaacgagctgcagaatcagggact 9339661  T
Q  360 aaagtgactatttcctca 377  Q
    |||| |||||||| ||||    
T  9339660 aaagggactatttgctca 9339643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 260 - 382
Target Start/End: Original strand, 7945563 - 7945685
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| | | ||||| |||||||||  ||||| ||||||||     
T  7945563 cagggactaaagtgataacggaagtgcatagtcagagacttatttgtatttaatcctgagtcaggaacctatgtgacagcgaggtgcagagtcagggacc 7945662  T
Q  360 aaagtgactatttcctcattttt 382  Q
    ||| ||| ||||| |||| ||||    
T  7945663 aaaatgattatttgctcaatttt 7945685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 10333199 - 10333312
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaag 363  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||  || |||||  ||||||||| |||||||||| || || ||    
T  10333199 gactaaagtgataacggaagtgcagagtcagagacttatttgtatttaatcttgagtcagagacctatgtaacagcgagctgcagaatcagagattatag 10333298  T
Q  364 tgactatttcctca 377  Q
    ||||||||| ||||    
T  10333299 tgactatttgctca 10333312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 377 - 508
Target Start/End: Complemental strand, 26650626 - 26650495
Alignment:
Q  377 atttttctaagcgctcacccattcgcaaacgtgggtacctta-gggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggc 475  Q
    |||||| |||||| |||||| ||| |||| |||||||||  | ||||||| ||||||||||||| |||||||||||||| ||||| ||||||  ||||||    
T  26650626 atttttgtaagcgttcacccgttcacaaaagtgggtaccccaagggcacatccttggaggtcactctacccttatataa-cactttctagttgatgtggc 26650528  T
Q  476 tcaccaatgtaggacatttttaagtcacacact 508  Q
    |||||||||| ||||||||||||||||||||||    
T  26650527 tcaccaatgtgggacatttttaagtcacacact 26650495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 378 - 508
Target Start/End: Complemental strand, 39746872 - 39746741
Alignment:
Q  378 tttttctaagcgctcacccattcgcaaacgtgggtacctta-gggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggct 476  Q
    ||||| |||||| |||| | ||| |||| |||||||||||| ||||||| |||||||||| || |||||||||||||||||||| |||||| ||||||||    
T  39746872 tttttgtaagcgttcactcgttcacaaaagtgggtaccttaagggcacatccttggaggttactctacccttatataaacactttctagttggtgtggct 39746773  T
Q  477 caccaatgtaggacatttttaagtcacacact 508  Q
    ||||||| |   ||||||||||||||||||||    
T  39746772 caccaatatgaaacatttttaagtcacacact 39746741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 378 - 506
Target Start/End: Original strand, 10106636 - 10106765
Alignment:
Q  378 tttttctaagcgctcacccattcgcaaacgtgggtacctta-gggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggct 476  Q
    ||||| |||||| |||||| ||| |||| |||||||||  | ||||||||||||||||||||| || ||||||||||||||||| |||||| | ||| ||    
T  10106636 tttttgtaagcgttcacccgttcacaaaagtgggtaccccaagggcacacccttggaggtcactctccccttatataaacacttactagttggggtgact 10106735  T
Q  477 caccaatgtaggacatttttaagtcacaca 506  Q
     |||||||| ||||||||||||||||||||    
T  10106736 aaccaatgtgggacatttttaagtcacaca 10106765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 377 - 536
Target Start/End: Original strand, 12179295 - 12179462
Alignment:
Q  377 atttttctaagcgctcacccattcgcaaacgtgggta-ccttagggcacacccttggaggtca-ccctacccttatataaacacttgctagttagtgt-- 472  Q
    ||||||||||| |||||| | ||| |||  ||||||| ||  ||||||||| |||| |||||| ||| ||||||||||||||||||||||||| ||||      
T  12179295 atttttctaagtgctcactcgttcacaacagtgggtatcccaagggcacacacttgcaggtcatccccacccttatataaacacttgctagttggtgtac 12179394  T
Q  473 --ggctcaccaatgtaggacatttttaagt--cacacactggttcttaccatgtgtttttctatccaa 536  Q
      ||||||||||||||||| ||||||||||  |||||||| ||||||||  |||||||||||||||||    
T  12179395 gtggctcaccaatgtaggatatttttaagtcacacacactagttcttacattgtgtttttctatccaa 12179462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 263 - 372
Target Start/End: Complemental strand, 10333097 - 10332988
Alignment:
Q  263 ggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaa 362  Q
    |||||||| |||||||||||||||||||| || | ||||||| ||||||||||||| ||||||| ||||| |||| ||||  ||| | ||||||||||||    
T  10333097 ggactaaaatgataacggaagtgcagagtaagggacttatttatatttaatcctgaatcaaggacctatgtgacaacgaggtgcaaagtcagggactaaa 10332998  T
Q  363 gtgactattt 372  Q
    ||||||||||    
T  10332997 gtgactattt 10332988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 260 - 372
Target Start/End: Complemental strand, 52439589 - 52439481
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    ||||||||||||||||||||||| |||||||    || ||||| |||||||||||||||| ||  || ||||| |||||||||| |||||||||||| ||    
T  52439589 cagggactaaagtgataacggaaatgcagag----agacttatctgtatttaatcctgagccagagacctatgtgacagcgagctgcagaatcaggggct 52439494  T
Q  360 aaagtgactattt 372  Q
    |||||||||||||    
T  52439493 aaagtgactattt 52439481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 22856790 - 22856677
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaag 363  Q
    |||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| |||| ||  ||| || |  ||||| |||| ||||||||    
T  22856790 gactaaagtgataacggaagtgcagagttagagacttctttgtatttaatcctgagtcaagaatctttgtaacaacgtggtgcagagtcagtgactaaag 22856691  T
Q  364 tgactatttcctca 377  Q
    |||| |||| ||||    
T  22856690 tgaccatttgctca 22856677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 5783122 - 5783200
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgag 342  Q
    ||||||||||||||||||||||||||||||  | ||| |||||||||||| ||||||| |||||||||| |||||||||    
T  5783122 gactaaagtgataacggaagtgcagagtcatggacttctttgtatttaattctgagtcgaggatctatgtgacagcgag 5783200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 9341038 - 9341151
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaag 363  Q
    ||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||| ||| ||||| || || |||  ||||||| |  ||  ||||    
T  9341038 gactaaagtgataacagaagtgcaaagtcagagacttatttgtatttaatcctgagtcagggacctatgtgatagtgagatgcagaataaatgatcaaag 9341137  T
Q  364 tgactatttcctca 377  Q
    ||||||||| ||||    
T  9341138 tgactatttgctca 9341151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 431 - 508
Target Start/End: Original strand, 14582397 - 14582474
Alignment:
Q  431 ggaggtcaccctacccttatataaacacttgctagttagtgtggctcaccaatgtaggacatttttaagtcacacact 508  Q
    ||||||||| ||||||||||||||| | || |||||| |||||| |||||||||| ||||||||||||||||||||||    
T  14582397 ggaggtcactctacccttatataaaaaatttctagttggtgtggttcaccaatgtgggacatttttaagtcacacact 14582474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 264 - 341
Target Start/End: Original strand, 52440572 - 52440649
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcga 341  Q
    |||||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||| ||| ||||| ||||||||    
T  52440572 gactaaagtgataatggaagtgcagagtcagagacttatttatatttaatcctgactcagggacctatgtgacagcga 52440649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 264 - 372
Target Start/End: Complemental strand, 5782524 - 5782416
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaag 363  Q
    |||||||||||||| ||||||||| | |||||| ||| ||||||||||||| |||||||  || ||||| |||||||||  ||||| ||||||||||||     
T  5782524 gactaaagtgataagggaagtgcataatcagagacttctttgtatttaatcatgagtcagagacctatgtgacagcgaggtgcagagtcagggactaaaa 5782425  T
Q  364 tgactattt 372  Q
    |||| ||||    
T  5782424 tgacaattt 5782416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 260 - 372
Target Start/End: Complemental strand, 6612533 - 6612421
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    |||||| ||||||||||| |||||||||||||||||| ||| ||||||||||||| |||||||  ||  | |   ||||||||  ||||| |||||||||    
T  6612533 cagggattaaagtgataatggaagtgcagagtcagagacttgtttgtatttaatcatgagtcagagacatttataacagcgaggtgcagagtcagggact 6612434  T
Q  360 aaagtgactattt 372  Q
    |||||||||||||    
T  6612433 aaagtgactattt 6612421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 261 - 372
Target Start/End: Complemental strand, 7944268 - 7944159
Alignment:
Q  261 agggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggacta 360  Q
    |||||||||| |||||||| |||||||||||||  | ||||||||||||||||  ||||||| ||| ||||| |||||||||  ||| |||||||||||     
T  7944268 agggactaaattgataacgaaagtgcagagtcaaggacttatttgtatttaattttgagtcagggacctatgtgacagcgagttgcaaaatcagggact- 7944170  T
Q  361 aagtgactattt 372  Q
     |||||||||||    
T  7944169 -agtgactattt 7944159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 263 - 322
Target Start/End: Original strand, 6613991 - 6614050
Alignment:
Q  263 ggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtca 322  Q
    |||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  6613991 ggactaaaatgataactgaagtgcagagtcagagacttatttgtatttaatcctgagtca 6614050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 3117757 - 3117701
Alignment:
Q  266 ctaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtca 322  Q
    |||||||||||||||||||| ||||||||||  || ||||||||||||| |||||||    
T  3117757 ctaaagtgataacggaagtggagagtcagagatttctttgtatttaatcttgagtca 3117701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 420 - 472
Target Start/End: Complemental strand, 19406336 - 19406284
Alignment:
Q  420 ggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgt 472  Q
    ||||||||||||| |||||| |||||||||||||||||||| |||||| ||||    
T  19406336 ggcacacccttgggggtcactctacccttatataaacactttctagttggtgt 19406284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 50107210 - 50107270
Alignment:
Q  258 gccagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctga 318  Q
    |||| ||||||||||||||||||||||||| | |||||| ||  |||||||||||||||||    
T  50107210 gccaaggactaaagtgataacggaagtgcacattcagagactattttgtatttaatcctga 50107270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 25037987 - 25037930
Alignment:
Q  265 actaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtca 322  Q
    ||||||||||||||| |||| ||||||||| | ||| ||||||||||||| |||||||    
T  25037987 actaaagtgataacgtaagtccagagtcagtgacttctttgtatttaatcatgagtca 25037930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 25043199 - 25043142
Alignment:
Q  265 actaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtca 322  Q
    ||||||||||||||| |||| ||||||||| | ||| ||||||||||||| |||||||    
T  25043199 actaaagtgataacgtaagtccagagtcagtgacttctttgtatttaatcatgagtca 25043142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 263 - 324
Target Start/End: Complemental strand, 32664615 - 32664562
Alignment:
Q  263 ggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaag 324  Q
    ||||||||||||||||||||||||||||        ||||||||||||||||||||||||||    
T  32664615 ggactaaagtgataacggaagtgcagag--------ttatttgtatttaatcctgagtcaag 32664562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 267 - 342
Target Start/End: Original strand, 534574 - 534648
Alignment:
Q  267 taaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgag 342  Q
    |||||||||||| |||||| |||||||| | ||| ||||||||||||||||| ||||| | |||||  ||||||||    
T  534574 taaagtgataacagaagtgtagagtcag-gacttgtttgtatttaatcctgaatcaagaacctatgtaacagcgag 534648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 267 - 314
Target Start/End: Original strand, 34088485 - 34088532
Alignment:
Q  267 taaagtgataacggaagtgcagagtcagaggcttatttgtatttaatc 314  Q
    ||||||||||  |||||||||||||||||| ||| |||||||||||||    
T  34088485 taaagtgatagtggaagtgcagagtcagagacttctttgtatttaatc 34088532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 44020088 - 44020038
Alignment:
Q  272 tgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtca 322  Q
    |||||||| |||||||||||||||| ||| ||| ||||||||| |||||||    
T  44020088 tgataacgtaagtgcagagtcagagacttctttatatttaatcttgagtca 44020038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 379 - 502
Target Start/End: Original strand, 14724903 - 14725027
Alignment:
Q  379 ttttctaagcgctcacccattcgcaaacgtgggta-ccttagggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggctc 477  Q
    |||||||||||||||||| ||| |||| ||||||| ||  | |||||| | ||| |||||||||  | ||||||||||||||| | || |||| || |||    
T  14724903 ttttctaagcgctcacccgttcccaaaagtgggtaccccaatggcacatctttgtaggtcaccccccacttatataaacacttaccaggtagtatgactc 14725002  T
Q  478 accaatgtaggacatttttaagtca 502  Q
     | ||||| |||| ||| |||||||    
T  14725003 tcaaatgtgggacctttataagtca 14725027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 4e-37; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 378 - 508
Target Start/End: Original strand, 19430628 - 19430759
Alignment:
Q  378 tttttctaagcgctcacccattcgcaaacgtgggta-ccttagggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggct 476  Q
    ||||| |||||| |||||| ||| |||| ||||||| ||  |||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||    
T  19430628 tttttgtaagcgttcacccgttcacaaaagtgggtatcccaagggcacacccttggaggtcactctacccttatataaacactttctagttggtgtggct 19430727  T
Q  477 caccaatgtaggacatttttaagtcacacact 508  Q
    ||||||||| ||||||||||||||||||||||    
T  19430728 caccaatgtgggacatttttaagtcacacact 19430759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 378 - 508
Target Start/End: Original strand, 19566777 - 19566908
Alignment:
Q  378 tttttctaagcgctcacccattcgcaaacgtgggta-ccttagggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggct 476  Q
    ||||| |||||| |||||| ||| |||| ||||||| ||  |||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||    
T  19566777 tttttgtaagcgttcacccgttcacaaaagtgggtatcccaagggcacacccttggaggtcactctacccttatataaacactttctagttggtgtggct 19566876  T
Q  477 caccaatgtaggacatttttaagtcacacact 508  Q
    ||||||||| ||||||||||||||||||||||    
T  19566877 caccaatgtgggacatttttaagtcacacact 19566908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 260 - 382
Target Start/End: Complemental strand, 35177509 - 35177387
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||| ||| ||||| |||||||||| ||||||| |||||||    
T  35177509 cagggactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatccggagtcagggacctatgtgacagcgagctgcagaattagggact 35177410  T
Q  360 aaagtgactatttcctcattttt 382  Q
    ||| ||||||||| |||| ||||    
T  35177409 aaattgactatttgctcaatttt 35177387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 260 - 378
Target Start/End: Original strand, 32898454 - 32898572
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||| ||| ||||| ||||| |||  ||||| |||||||||    
T  32898454 cagggactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctaagtcagggacctatgtgacagtgagttgcagagtcagggact 32898553  T
Q  360 aaagtgactatttcctcat 378  Q
    ||||||||||||| |||||    
T  32898554 aaagtgactatttgctcat 32898572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 378 - 508
Target Start/End: Original strand, 19436070 - 19436201
Alignment:
Q  378 tttttctaagcgctcacccattcgcaaacgtgggtacctta-gggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggct 476  Q
    ||||| |||||| |||||  ||| |||| |||||||||  | |||||||||||||||||||||  ||||||||||||||||||| |||||| ||||||||    
T  19436070 tttttgtaagcgttcaccagttcacaaaagtgggtaccccaagggcacacccttggaggtcactttacccttatataaacactttctagttggtgtggct 19436169  T
Q  477 caccaatgtaggacatttttaagtcacacact 508  Q
    ||||||||| ||||||||||||||||||||||    
T  19436170 caccaatgtgggacatttttaagtcacacact 19436201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 378 - 508
Target Start/End: Original strand, 19572219 - 19572350
Alignment:
Q  378 tttttctaagcgctcacccattcgcaaacgtgggtacctta-gggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggct 476  Q
    ||||| |||||| |||||  ||| |||| |||||||||  | |||||||||||||||||||||  ||||||||||||||||||| |||||| ||||||||    
T  19572219 tttttgtaagcgttcaccagttcacaaaagtgggtaccccaagggcacacccttggaggtcactttacccttatataaacactttctagttggtgtggct 19572318  T
Q  477 caccaatgtaggacatttttaagtcacacact 508  Q
    ||||||||| ||||||||||||||||||||||    
T  19572319 caccaatgtgggacatttttaagtcacacact 19572350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 378 - 505
Target Start/End: Original strand, 13584765 - 13584893
Alignment:
Q  378 tttttctaagcgctcacccattcgcaaacgtgggtacctta-gggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggct 476  Q
    ||||| |||||| |||||| ||| |||| |||||||||  | ||||||||||||||| ||||| |||||| ||||||||||||| |||||| ||||||||    
T  13584765 tttttgtaagcgttcacccgttcacaaaagtgggtaccccaagggcacacccttggatgtcactctacccgtatataaacactttctagttggtgtggct 13584864  T
Q  477 caccaatgtaggacatttttaagtcacac 505  Q
    ||||||||| |||||||||||| ||||||    
T  13584865 caccaatgtgggacatttttaaatcacac 13584893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 378 - 504
Target Start/End: Complemental strand, 33616261 - 33616135
Alignment:
Q  378 tttttctaagcgctcacccattcgcaaacgtgggtaccttagggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggctc 477  Q
    ||||| |||||| ||| || |||  ||| |||||||||  ||||||||||||||||||| || |||||||||||||||||||| |||||| |||||||||    
T  33616261 tttttgtaagcgttcatccgttcataaaagtgggtacccaagggcacacccttggaggttactctacccttatataaacactttctagttggtgtggctc 33616162  T
Q  478 accaatgtaggacatttttaagtcaca 504  Q
    ||||||||  |||||||||||| ||||    
T  33616161 accaatgtgagacatttttaagccaca 33616135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 264 - 381
Target Start/End: Original strand, 1952983 - 1953099
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaag 363  Q
    ||||||||||||||||||||| |||||||| || ||||||||||| ||||||| |||||  |||||||  |||| ||||| |||||||||||||||||||    
T  1952983 gactaaagtgataacggaagtacagagtcatagacttatttgtatgtaatcct-agtcagagatctatatgacaacgagctgcagaatcagggactaaag 1953081  T
Q  364 tgactatttcctcatttt 381  Q
    ||||||||| ||| ||||    
T  1953082 tgactatttactcttttt 1953099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 260 - 372
Target Start/End: Original strand, 35178813 - 35178925
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    |||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||| ||| | ||  ||||||||   ||||| ||||||||     
T  35178813 cagggactaaagtgataacggaagtgcagaatcagggacttatttgtatttaatcctgagtcagggaccaatatgacagcgatgtgcagagtcagggacc 35178912  T
Q  360 aaagtgactattt 372  Q
    |||||||||||||    
T  35178913 aaagtgactattt 35178925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 260 - 372
Target Start/End: Original strand, 10407593 - 10407705
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    |||| ||||||||||||||||||||||| ||| |  | ||||||||| ||||||||| |||||| || ||||| ||||| |||| |||||||||| ||||    
T  10407593 caggaactaaagtgataacggaagtgcaaagttatggacttatttgtgtttaatcctaagtcaatgacctatgtgacagtgagctgcagaatcagagact 10407692  T
Q  360 aaagtgactattt 372  Q
    |||||||||||||    
T  10407693 aaagtgactattt 10407705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 418 - 508
Target Start/End: Original strand, 31031194 - 31031282
Alignment:
Q  418 agggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggctcaccaatgtaggacatttttaagtcacacact 508  Q
    |||||||| ||||||||||||| ||||||||||||| ||  || |||||| |||||||||||||||||  |||||||||||||||||||||    
T  31031194 agggcacatccttggaggtcactctacccttatatatac--tttctagttggtgtggctcaccaatgtgagacatttttaagtcacacact 31031282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 266 - 372
Target Start/End: Original strand, 41754810 - 41754915
Alignment:
Q  266 ctaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaagtg 365  Q
    ||||||| |||||||||||| ||||||||   ||| |||||||||||||||||||||  |||||||| |||||||||  ||||||||| ||| |||||||    
T  41754810 ctaaagtaataacggaagtgtagagtcaggaacttgtttgtatttaatcctgagtcagagatctatgtgacagcgaggtgcagaatca-ggattaaagtg 41754908  T
Q  366 actattt 372  Q
    |||||||    
T  41754909 actattt 41754915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 5965455 - 5965513
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtca 322  Q
    |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||    
T  5965455 gactaaagtgataacggaagtgcagagtcaaagacttctttgtatttaatcctgagtca 5965513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 275 - 381
Target Start/End: Complemental strand, 41754097 - 41753991
Alignment:
Q  275 taacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaagtgactatttcc 374  Q
    ||||| ||||| |||||||| | ||| ||| ||||||||||||||||| ||| ||||| |||||| ||  |||||| ||||||||||||||||||||| |    
T  41754097 taacgaaagtgtagagtcagggacttgtttatatttaatcctgagtcagggacctatgtgacagcaaggtgcagaaccagggactaaagtgactatttgc 41753998  T
Q  375 tcatttt 381  Q
    || ||||    
T  41753997 tcctttt 41753991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 45476272 - 45476218
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctga 318  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||    
T  45476272 gactaaagtgataacagaagtgcagagtcagagacttatttgtatttaattctga 45476218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 271 - 332
Target Start/End: Complemental strand, 1952045 - 1951985
Alignment:
Q  271 gtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatg 332  Q
    ||||||| | || ||||||||||||  |||||||||||||||||||||||| ||||||||||    
T  1952045 gtgataatgaaaatgcagagtcagaaacttatttgtatttaatcctgagtc-aggatctatg 1951985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 267 - 372
Target Start/End: Complemental strand, 30134673 - 30134568
Alignment:
Q  267 taaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaagtga 366  Q
    |||||||||||| |||||||||||||| |  ||| ||||||||||||| |||||   ||| || || |||||||||  ||||| | | ||||||||||||    
T  30134673 taaagtgataacagaagtgcagagtcacacacttctttgtatttaatcatgagtaggggacctttgtgacagcgaggtgcagagttaaggactaaagtga 30134574  T
Q  367 ctattt 372  Q
     |||||    
T  30134573 ttattt 30134568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 259 - 311
Target Start/End: Complemental strand, 10406321 - 10406269
Alignment:
Q  259 ccagggactaaagtgataacggaagtgcagagtcagaggcttatttgtattta 311  Q
    |||||||||||||||||||  ||||||||||||||||| ||| ||| ||||||    
T  10406321 ccagggactaaagtgataatagaagtgcagagtcagagacttgtttttattta 10406269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 28619558 - 28619616
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtca 322  Q
    ||||||||||||||  ||||||||||||||  | | | |||||||||||||||||||||    
T  28619558 gactaaagtgataatagaagtgcagagtcaatgacctctttgtatttaatcctgagtca 28619616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 5736955 - 5736898
Alignment:
Q  261 agggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctga 318  Q
    ||||||||||||||||||| ||||| ||||| ||||  || |||||||||||| ||||    
T  5736955 agggactaaagtgataacgaaagtgtagagttagagatttctttgtatttaattctga 5736898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 324
Target Start/End: Complemental strand, 28524868 - 28524808
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggctta-tttgtatttaatcctgagtcaag 324  Q
    ||||||| |||||||||||||||| | ||| ||| ||| |||||||||||||||||||||||    
T  28524868 gactaaaatgataacggaagtgcacattca-aggattactttgtatttaatcctgagtcaag 28524808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 322
Target Start/End: Complemental strand, 41121214 - 41121161
Alignment:
Q  269 aagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtca 322  Q
    |||||||||  |||||||| |||||||| ||| ||||||||||||| |||||||    
T  41121214 aagtgataatagaagtgcatagtcagagacttctttgtatttaatcatgagtca 41121161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 264 - 332
Target Start/End: Original strand, 5738036 - 5738104
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatg 332  Q
    |||| |||||||||||||||| ||||||||    ||| ||||||||||||| ||||||| ||| |||||    
T  5738036 gactgaagtgataacggaagtacagagtcaataacttctttgtatttaatcttgagtcatggacctatg 5738104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 260 - 372
Target Start/End: Complemental strand, 116169 - 116057
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    |||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||| ||| ||||| |||||||||| ||||||| ||| |||    
T  116169 cagggactaaagtgataacggaagtgcatagtcagggacttatttgtatttaatcctgagtcagggacctatgtgacagcgagctgcagaatgaggaact 116070  T
Q  360 aaagtgactattt 372  Q
    |||||||||||||    
T  116069 aaagtgactattt 116057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 2e-35; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 260 - 372
Target Start/End: Complemental strand, 8074565 - 8074453
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    |||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||  |||| |||||||||| ||| |||||||||||    
T  8074565 caggaactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcctgagtcagggacttatgtgacagcgagctgcataatcagggact 8074466  T
Q  360 aaagtgactattt 372  Q
    |||||||||||||    
T  8074465 aaagtgactattt 8074453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 260 - 372
Target Start/End: Complemental strand, 4592975 - 4592863
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||| |||  |||| ||||||||||  || |||||||||||    
T  4592975 cagggactaaagtgataacggaagtgcagagtcagggacttatttgtatttaatcttgagtcagggacttatgtgacagcgagctacataatcagggact 4592876  T
Q  360 aaagtgactattt 372  Q
    |||||||||||||    
T  4592875 aaagtgactattt 4592863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 260 - 378
Target Start/End: Original strand, 546045 - 546162
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    ||||||||||||||||||||||||||||||||||  | ||||| ||||||||||||||||||| ||| ||||| |||||||||| ||| |||| ||||||    
T  546045 cagggactaaagtgataacggaagtgcagagtcaaggacttatctgtatttaatcctgagtcagggacctatgtgacagcgagctgcaaaatc-gggact 546143  T
Q  360 aaagtgactatttcctcat 378  Q
    ||||||||||||| |||||    
T  546144 aaagtgactatttgctcat 546162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 264 - 372
Target Start/End: Complemental strand, 2464779 - 2464671
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaag 363  Q
    |||||||||||||||| ||||||||||| || | ||||||||||||||||| ||||||| ||| ||||  |||||||||| |||||||||| ||||||||    
T  2464779 gactaaagtgataacgtaagtgcagagttagggacttatttgtatttaatcatgagtcatggacctatatgacagcgagctgcagaatcagtgactaaag 2464680  T
Q  364 tgactattt 372  Q
    |||||||||    
T  2464679 tgactattt 2464671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 262 - 382
Target Start/End: Original strand, 28591125 - 28591245
Alignment:
Q  262 gggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaa 361  Q
    |||||||||||||||| |||||||||||||||| |  |||||||||||||||||||||||| ||| ||||| |||||||||  ||||| |||||||  ||    
T  28591125 gggactaaagtgataaaggaagtgcagagtcagggatttatttgtatttaatcctgagtcagggacctatgtgacagcgaggtgcagagtcagggatcaa 28591224  T
Q  362 agtgactatttcctcattttt 382  Q
    ||||||||||| ||| |||||    
T  28591225 agtgactatttgctctttttt 28591245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 377 - 506
Target Start/End: Original strand, 7805667 - 7805797
Alignment:
Q  377 atttttctaagcgctcacccattcgcaaacgtgggtacctta-gggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggc 475  Q
    |||||| |||||| |||||| ||| |||| |||||||||  | ||||||||||||||||||||| || ||||||||||||||||| |||||| | ||| |    
T  7805667 atttttgtaagcgttcacccgttcacaaaagtgggtaccccaagggcacacccttggaggtcactcttcccttatataaacacttactagttggggtgac 7805766  T
Q  476 tcaccaatgtaggacatttttaagtcacaca 506  Q
    | |||||||| ||||||||||||||||||||    
T  7805767 taaccaatgtgggacatttttaagtcacaca 7805797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 378 - 506
Target Start/End: Original strand, 14374719 - 14374848
Alignment:
Q  378 tttttctaagcgctcacccattcgcaaacgtgggtacctta-gggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggct 476  Q
    ||||| |||||| |||||| ||| |||| |||||||||  | ||||||||||||||||||||| || ||||||||||||||||| |||||| | ||| ||    
T  14374719 tttttgtaagcgttcacccgttcacaaaagtgggtaccccaagggcacacccttggaggtcactcttcccttatataaacactttctagttggggtgact 14374818  T
Q  477 caccaatgtaggacatttttaagtcacaca 506  Q
     |||||||| ||||||||||||||||||||    
T  14374819 aaccaatgtgggacatttttaagtcacaca 14374848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 378 - 504
Target Start/End: Complemental strand, 13582180 - 13582053
Alignment:
Q  378 tttttctaagcgctcacccattcgcaaacgtgggtacctta-gggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggct 476  Q
    ||||| |||||| |||||| ||| |||| |||||||||  | ||||||||||||||||||||| || ||||||||||||||||| |||||| | ||| ||    
T  13582180 tttttgtaagcgttcacccgttcacaaaagtgggtaccccaagggcacacccttggaggtcactcttcccttatataaacacttactagttggggtgact 13582081  T
Q  477 caccaatgtaggacatttttaagtcaca 504  Q
     |||||||| ||||||||||||||||||    
T  13582080 aaccaatgtgggacatttttaagtcaca 13582053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 260 - 372
Target Start/End: Original strand, 2466783 - 2466895
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    |||||||||||||||||||||||||||||||| || | ||||||| ||||||||||||| |||| || ||||| || ||||||  ||||| |||| |||     
T  2466783 cagggactaaagtgataacggaagtgcagagttagggacttatttttatttaatcctgaatcaatgacctatgtgatagcgaggtgcagagtcagagacc 2466882  T
Q  360 aaagtgactattt 372  Q
    |||||||||||||    
T  2466883 aaagtgactattt 2466895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 267 - 372
Target Start/End: Original strand, 40612675 - 40612780
Alignment:
Q  267 taaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaagtga 366  Q
    ||||||||||||||||||||||||||||     ||| ||||||||||||||||||| ||| ||| | ||||| |||| ||| ||||||||||||||||||    
T  40612675 taaagtgataacggaagtgcagagtcaggaaaatatctgtatttaatcctgagtcagggacctacgtgacagtgagctgcaaaatcagggactaaagtga 40612774  T
Q  367 ctattt 372  Q
    ||||||    
T  40612775 ctattt 40612780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 9538062 - 9538170
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaag 363  Q
    ||||||| |||||||||||||||| | |||||| ||| ||||||||||||||||||||| ||| ||||  |||| ||||  ||||| |||||||| ||||    
T  9538062 gactaaaatgataacggaagtgcacaatcagagacttctttgtatttaatcctgagtcagggacctatatgacaacgagatgcagagtcagggaccaaag 9538161  T
Q  364 tgactattt 372  Q
    |||||||||    
T  9538162 tgactattt 9538170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 16611838 - 16611760
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgag 342  Q
    |||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||  || ||||| |||||||||    
T  16611838 gactaaagtgataacggaagtgcataatcagaggcttctttgtatttaatcctgagtcagagacctatgtgacagcgag 16611760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 372
Target Start/End: Complemental strand, 18400284 - 18400192
Alignment:
Q  280 gaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaagtgactattt 372  Q
    ||||||||||||||| | ||| ||| ||||||||||||||||||||| ||||| ||||| |||  ||||| ||||||||||||||||| ||||    
T  18400284 gaagtgcagagtcagtgacttctttttatttaatcctgagtcaaggacctatgtgacagtgaggtgcagagtcagggactaaagtgaccattt 18400192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 263 - 342
Target Start/End: Complemental strand, 19183061 - 19182982
Alignment:
Q  263 ggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgag 342  Q
    ||||||||||||||||||||||| ||||||||   |||||||||||||||||||||||||  || ||||| |||||||||    
T  19183061 ggactaaagtgataacggaagtgtagagtcaggaacttatttgtatttaatcctgagtcagagacctatgtgacagcgag 19182982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 267 - 378
Target Start/End: Complemental strand, 21069396 - 21069285
Alignment:
Q  267 taaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaagtga 366  Q
    |||||||| ||| ||||||||||||||  | |||||||||||||||||||||||||  || || || |||| ||||  ||||| |||| |||||||||||    
T  21069396 taaagtgaaaacagaagtgcagagtcaaggacttatttgtatttaatcctgagtcagagacctctgtgacaacgaggtgcagagtcagagactaaagtga 21069297  T
Q  367 ctatttcctcat 378  Q
    |||||| |||||    
T  21069296 ctatttgctcat 21069285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 267 - 377
Target Start/End: Complemental strand, 25590537 - 25590428
Alignment:
Q  267 taaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaagtga 366  Q
    |||||||||||| |||||||||| |||||| |||||||||||||||||| |||||| ||| ||||| |||||||||  ||||| ||||  |  |||||||    
T  25590537 taaagtgataacagaagtgcagaatcagagacttatttgtatttaatcc-gagtcagggacctatgtgacagcgaggtgcagagtcagaaaacaaagtga 25590439  T
Q  367 ctatttcctca 377  Q
    |||||| ||||    
T  25590438 ctatttgctca 25590428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 544757 - 544700
Alignment:
Q  265 actaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtca 322  Q
    |||||| | ||||||||||||||||||||| | |||||||||||||||||||||||||    
T  544757 actaaatttataacggaagtgcagagtcagtgacttatttgtatttaatcctgagtca 544700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 263 - 332
Target Start/End: Original strand, 19186232 - 19186301
Alignment:
Q  263 ggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatg 332  Q
    |||||||||||||||||||| || |||||||||| ||| ||||||||||||||| ||||| ||| |||||    
T  19186232 ggactaaagtgataacggaaatgtagagtcagagacttgtttgtatttaatcctaagtcagggacctatg 19186301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 260 - 372
Target Start/End: Original strand, 8075842 - 8075954
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggact 359  Q
    |||||||||||||||||||| ||||||||| |||||  ||| ||||||||||||| ||| ||| ||||||||   ||||||||  ||||| |||  |||     
T  8075842 cagggactaaagtgataacgaaagtgcagaatcagatacttttttgtatttaatcttgaatcagggatctatctaacagcgaggtgcagagtcaatgacc 8075941  T
Q  360 aaagtgactattt 372  Q
    |||| ||||||||    
T  8075942 aaagcgactattt 8075954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 14891160 - 14891269
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaag 363  Q
    |||||||||||||||||||||| ||||||||||    | ||| |||||||| |||||||  || ||||| |||||||||  ||||| | |||||| ||||    
T  14891160 gactaaagtgataacggaagtgtagagtcagag----acttgcatttaatcatgagtcagagacctatgtgacagcgaggtgcagagtgagggaccaaag 14891255  T
Q  364 tgactatttcctca 377  Q
    ||||||||| ||||    
T  14891256 tgactatttgctca 14891269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 32641735 - 32641795
Alignment:
Q  260 cagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagt 320  Q
    |||||| ||||||||||||||||||||||||||||   ||||||||||||||||| |||||    
T  32641735 cagggattaaagtgataacggaagtgcagagtcagcaacttatttgtatttaatcttgagt 32641795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 18004748 - 18004696
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcct 316  Q
    |||||||||||||||||||||||||||||| || | | |||||||||||||||    
T  18004748 gactaaagtgataacggaagtgcagagtcatagacctctttgtatttaatcct 18004696  T

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Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 269 - 328
Target Start/End: Original strand, 4594118 - 4594176
Alignment:
Q  269 aagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatc 328  Q
    ||||||||| |||||||||||||||  | ||||||||||||||||||||||||| |||||    
T  4594118 aagtgataatggaagtgcagagtcat-gacttatttgtatttaatcctgagtcagggatc 4594176  T

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Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 265 - 311
Target Start/End: Complemental strand, 14881056 - 14881010
Alignment:
Q  265 actaaagtgataacggaagtgcagagtcagaggcttatttgtattta 311  Q
    |||||||||||||||||||||||||||||| | ||||||||| ||||    
T  14881056 actaaagtgataacggaagtgcagagtcagggacttatttgtgttta 14881010  T

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Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 418 - 502
Target Start/End: Complemental strand, 9361858 - 9361776
Alignment:
Q  418 agggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggctcaccaatgtaggacatttttaagtca 502  Q
    ||||||||||||||||  ||||||| | |||||||||| |||| |||| |||| || ||| ||||||| | ||||||||||||||    
T  9361858 agggcacacccttgga--tcaccctccacttatataaatacttactaggtagtatgtctctccaatgtggcacatttttaagtca 9361776  T

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Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 304 - 381
Target Start/End: Original strand, 13651173 - 13651249
Alignment:
Q  304 tgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaagtgactatttcctcatttt 381  Q
    ||||||||||||||||||| ||| ||||| |||||| ||  ||| | ||| |||||||||||||||||| ||||||||    
T  13651173 tgtatttaatcctgagtcagggacctatgtgacagc-aggtgcacagtcaaggactaaagtgactatttgctcatttt 13651249  T

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Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 264 - 364
Target Start/End: Complemental strand, 9537132 - 9537033
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaag 363  Q
    |||||||||||||| ||||||||| |||||  | ||| |||||||||||| || |||||  || ||||| |||||||||  ||||| | |||||||||||    
T  9537132 gactaaagtgataatggaagtgcacagtcat-gacttctttgtatttaattctaagtcagagacctatgtgacagcgaggtgcagagtgagggactaaag 9537034  T

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Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 269 - 313
Target Start/End: Original strand, 13483174 - 13483218
Alignment:
Q  269 aagtgataacggaagtgcagagtcagaggcttatttgtatttaat 313  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||    
T  13483174 aagtgataacggaagtgcaaagtcagagacttgtttgtatttaat 13483218  T

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Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 264 - 372
Target Start/End: Original strand, 31947050 - 31947158
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaag 363  Q
    |||||||||||||||||||||  ||||||| || ||| ||||||||||||  | ||| | | ||||||  |||| | |   |||||||||| ||||||||    
T  31947050 gactaaagtgataacggaagtctagagtcatagacttgtttgtatttaattttaagtaaggaatctatatgacaacaaagtgcagaatcagagactaaag 31947149  T
Q  364 tgactattt 372  Q
    |||||||||    
T  31947150 tgactattt 31947158  T

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Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 32640398 - 32640342
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagt 320  Q
    ||||||||||||||| |||||  ||||| || | |||||||||||||||||||||||    
T  32640398 gactaaagtgataacagaagtttagagttagggacttatttgtatttaatcctgagt 32640342  T

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Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 379 - 465
Target Start/End: Original strand, 31987343 - 31987430
Alignment:
Q  379 ttttctaagcgctcacccattcgcaaacgtgggtacctta-gggcacacccttggaggtcaccctacccttatataaacacttgctag 465  Q
    |||||| ||||||||| | ||||||||  ||||||||  | ||| ||| |||||||||||||||| | ||||||||||||||| ||||    
T  31987343 ttttcttagcgctcactcgttcgcaaaaatgggtaccccaagggtacatccttggaggtcaccctccgcttatataaacacttactag 31987430  T

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Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 268 - 322
Target Start/End: Complemental strand, 13483126 - 13483072
Alignment:
Q  268 aaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtca 322  Q
    |||||||||||| ||||||||||| |||| ||| ||| ||||||||| |||||||    
T  13483126 aaagtgataacgaaagtgcagagtaagagacttctttatatttaatcatgagtca 13483072  T

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Target: scaffold0011 (Bit Score: 68; Significance: 5e-30; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 418 - 508
Target Start/End: Original strand, 7516 - 7607
Alignment:
Q  418 agggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggctcaccaatgtaggaca-tttttaagtcacacact 508  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||| ||||| |||||||||||||||||    
T  7516 agggcacacccttggaggtcacactacccttatataaacactttctagttggtgtggctcaccaatgtgggacattttttaagtcacacact 7607  T

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Target: scaffold0011; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 378 - 508
Target Start/End: Original strand, 2221 - 2353
Alignment:
Q  378 tttttctaagcgctcacccattcgcaaacgtgggtacctta-gggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggct 476  Q
    ||||| |||||| ||| || ||| |||| |||||||||  | |||||||||||||||||||||  ||||||||||||||||||| |||||| ||||||||    
T  2221 tttttgtaagcgttcatccgttcacaaaagtgggtaccccaagggcacacccttggaggtcacaatacccttatataaacactttctagttggtgtggct 2320  T
Q  477 caccaatgtaggaca-tttttaagtcacacact 508  Q
    ||||||||| ||||| |||||||||||||||||    
T  2321 caccaatgtgggacattttttaagtcacacact 2353  T

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Target: scaffold0132 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 418 - 508
Target Start/End: Complemental strand, 2578 - 2488
Alignment:
Q  418 agggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggctcaccaatgtaggacatttttaagtcacacact 508  Q
    |||||||||||||||||||||| ||||||||||||||| |||| |||||| |||||||||| |||||| ||||||||||||||||||||||    
T  2578 agggcacacccttggaggtcactctacccttatataaatactttctagttggtgtggctcaacaatgtgggacatttttaagtcacacact 2488  T

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Target: scaffold0132; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 418 - 508
Target Start/End: Complemental strand, 10538 - 10448
Alignment:
Q  418 agggcacacccttggaggtcaccctacccttatataaacacttgctagttagtgtggctcaccaatgtaggacatttttaagtcacacact 508  Q
    |||||||||||||||||||||| ||||||||||||||| |||| |||||| |||||||||| |||||| ||||||||||||||||||||||    
T  10538 agggcacacccttggaggtcactctacccttatataaatactttctagttggtgtggctcaacaatgtgggacatttttaagtcacacact 10448  T

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Target: scaffold0039 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 264 - 372
Target Start/End: Complemental strand, 79183 - 79075
Alignment:
Q  264 gactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaag 363  Q
    ||||||||||||| |||| ||||| |||||  | ||| ||| ||||||||| ||||||||||| ||||| |||||||||  ||||| ||||| ||||||     
T  79183 gactaaagtgatatcggaggtgcaaagtcaaggacttctttttatttaatcatgagtcaaggacctatgtgacagcgaggtgcagagtcaggaactaaat 79084  T
Q  364 tgactattt 372  Q
    |||||||||    
T  79083 tgactattt 79075  T

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Target: scaffold0039; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 269 - 371
Target Start/End: Original strand, 74331 - 74433
Alignment:
Q  269 aagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtcaaggatctatgcgacagcgagcagcagaatcagggactaaagtgact 368  Q
    |||||||| | || ||| |||||||  | ||| ||||||||||||| ||||| | ||| ||||| ||||| |||  ||||| |||||||||||| |||||    
T  74331 aagtgatatcagaggtgtagagtcaaggacttctttgtatttaatcatgagttagggacctatgtgacagtgagttgcagagtcagggactaaactgact 74430  T
Q  369 att 371  Q
    |||    
T  74431 att 74433  T

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Target: scaffold0767 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 5715 - 5651
Alignment:
Q  258 gccagggactaaagtgataacggaagtgcagagtcagaggcttatttgtatttaatcctgagtca 322  Q
    ||||| |||||||||||||||||||||| |||||||| | ||| |||||||||||| ||||||||    
T  5715 gccagagactaaagtgataacggaagtgtagagtcagggacttctttgtatttaattctgagtca 5651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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