View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0722_low_6 (Length: 426)

Name: NF0722_low_6
Description: NF0722
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0722_low_6
NF0722_low_6
[»] scaffold1186 (1 HSPs)
scaffold1186 (1-334)||(1724-2056)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-334)||(186212-186544)
[»] chr4 (33 HSPs)
chr4 (1-334)||(14630839-14631171)
chr4 (1-334)||(26445909-26446243)
chr4 (21-334)||(2424423-2424737)
chr4 (1-185)||(25513702-25513887)
chr4 (146-330)||(10237232-10237416)
chr4 (94-289)||(19622093-19622288)
chr4 (240-327)||(17142918-17143005)
chr4 (157-289)||(54363268-54363400)
chr4 (240-334)||(15747842-15747935)
chr4 (100-271)||(19080175-19080346)
chr4 (157-289)||(15213598-15213730)
chr4 (1-87)||(35660906-35660992)
chr4 (1-78)||(16296897-16296974)
chr4 (157-286)||(17375278-17375407)
chr4 (27-95)||(45314124-45314193)
chr4 (1-93)||(9638954-9639046)
chr4 (1-90)||(33186850-33186939)
chr4 (27-95)||(26921550-26921619)
chr4 (5-61)||(15747793-15747849)
chr4 (1-95)||(15239832-15239927)
chr4 (283-334)||(16025917-16025968)
chr4 (2-61)||(17142998-17143057)
chr4 (25-91)||(14477578-14477644)
chr4 (1-91)||(9622434-9622525)
chr4 (1-90)||(12424306-12424397)
chr4 (1-91)||(55583141-55583232)
chr4 (25-87)||(18462974-18463036)
chr4 (27-90)||(12623264-12623327)
chr4 (27-90)||(19565959-19566022)
chr4 (27-90)||(46741147-46741210)
chr4 (59-90)||(16296819-16296850)
chr4 (33-91)||(20150771-20150830)
chr4 (1-45)||(13847193-13847237)
[»] chr8 (36 HSPs)
chr8 (1-308)||(18816311-18816619)
chr8 (1-334)||(21514393-21514727)
chr8 (21-326)||(4380653-4380951)
chr8 (137-327)||(22366099-22366289)
chr8 (137-334)||(22723274-22723471)
chr8 (240-334)||(38184981-38185075)
chr8 (240-334)||(20494569-20494663)
chr8 (86-289)||(24239756-24239960)
chr8 (1-87)||(36732428-36732514)
chr8 (1-61)||(18023572-18023632)
chr8 (1-90)||(22208216-22208305)
chr8 (1-57)||(38184928-38184984)
chr8 (21-90)||(12577826-12577896)
chr8 (7-98)||(21676614-21676704)
chr8 (1-91)||(21399662-21399753)
chr8 (1-91)||(21794155-21794246)
chr8 (267-334)||(24907917-24907986)
chr8 (1-81)||(22258322-22258403)
chr8 (7-87)||(21678867-21678946)
chr8 (1-48)||(22483775-22483822)
chr8 (137-255)||(16002174-16002291)
chr8 (1-91)||(18834371-18834458)
chr8 (1-91)||(23884116-23884205)
chr8 (297-334)||(18023647-18023684)
chr8 (7-72)||(21676521-21676585)
chr8 (27-90)||(21579247-21579310)
chr8 (27-90)||(22474704-22474767)
chr8 (27-81)||(12037205-12037260)
chr8 (5-91)||(22610287-22610371)
chr8 (33-91)||(22966756-22966815)
chr8 (27-81)||(29762909-29762964)
chr8 (5-63)||(22483912-22483970)
chr8 (35-91)||(21697509-21697566)
chr8 (27-90)||(17978457-17978520)
chr8 (240-268)||(18023625-18023653)
chr8 (27-90)||(41680174-41680237)
[»] chr7 (43 HSPs)
chr7 (1-334)||(47095154-47095488)
chr7 (1-326)||(15575665-15575991)
chr7 (1-334)||(43745358-43745692)
chr7 (21-334)||(4690699-4691011)
chr7 (1-335)||(20252198-20252538)
chr7 (1-326)||(18874681-18875003)
chr7 (1-283)||(48212743-48213027)
chr7 (138-334)||(18079452-18079648)
chr7 (22-134)||(16186815-16186928)
chr7 (240-334)||(34958234-34958328)
chr7 (85-334)||(16368271-16368522)
chr7 (240-334)||(831919-832012)
chr7 (240-334)||(1197099-1197192)
chr7 (136-270)||(15307448-15307582)
chr7 (160-273)||(19070020-19070133)
chr7 (1-93)||(708445-708537)
chr7 (157-289)||(16383825-16383957)
chr7 (1-87)||(19195562-19195647)
chr7 (1-91)||(15700751-15700840)
chr7 (136-265)||(12192473-12192602)
chr7 (1-61)||(34958321-34958381)
chr7 (1-61)||(831866-831926)
chr7 (1-61)||(1197046-1197106)
chr7 (5-60)||(8513773-8513828)
chr7 (1-91)||(58429-58517)
chr7 (25-87)||(42565872-42565934)
chr7 (6-91)||(8930786-8930872)
chr7 (5-60)||(8488114-8488169)
chr7 (1-91)||(25943213-25943303)
chr7 (1-47)||(38299738-38299784)
chr7 (5-90)||(43276764-43276848)
chr7 (1-91)||(15720724-15720815)
chr7 (1-91)||(33556121-33556211)
chr7 (157-289)||(25124272-25124402)
chr7 (1-91)||(13744526-13744614)
chr7 (33-93)||(16496154-16496215)
chr7 (27-90)||(9743120-9743183)
chr7 (257-334)||(3192149-3192227)
chr7 (33-90)||(15119354-15119411)
chr7 (1-91)||(18570592-18570683)
chr7 (5-42)||(19283051-19283088)
chr7 (27-90)||(14160897-14160960)
chr7 (27-90)||(14318020-14318083)
[»] chr3 (43 HSPs)
chr3 (1-326)||(17208234-17208560)
chr3 (1-326)||(14520156-14520482)
chr3 (5-334)||(24546902-24547232)
chr3 (17-334)||(24548986-24549301)
chr3 (137-334)||(25103946-25104125)
chr3 (240-334)||(2247935-2248029)
chr3 (157-289)||(17758582-17758714)
chr3 (157-289)||(19059902-19060034)
chr3 (1-93)||(29907582-29907675)
chr3 (1-93)||(29948748-29948841)
chr3 (1-93)||(29997902-29997995)
chr3 (2-93)||(14641565-14641656)
chr3 (112-271)||(20420956-20421114)
chr3 (1-61)||(2247882-2247942)
chr3 (1-91)||(22841295-22841390)
chr3 (25-96)||(21845691-21845762)
chr3 (1-90)||(14152415-14152504)
chr3 (25-95)||(50350855-50350928)
chr3 (1-91)||(17669714-17669805)
chr3 (160-289)||(40038907-40039036)
chr3 (1-91)||(54875490-54875581)
chr3 (25-87)||(3160666-3160728)
chr3 (1-91)||(3527173-3527261)
chr3 (1-90)||(5215594-5215683)
chr3 (4-91)||(6159350-6159438)
chr3 (1-63)||(45803347-45803409)
chr3 (25-91)||(48631278-48631344)
chr3 (1-91)||(6156656-6156746)
chr3 (17-91)||(17684867-17684942)
chr3 (21-60)||(15566721-15566760)
chr3 (1-91)||(2841522-2841613)
chr3 (46-87)||(13520408-13520449)
chr3 (1-91)||(14442120-14442211)
chr3 (172-289)||(51961126-51961242)
chr3 (5-90)||(50755274-50755360)
chr3 (86-255)||(11402766-11402935)
chr3 (27-90)||(53646100-53646163)
chr3 (27-90)||(54330348-54330411)
chr3 (5-63)||(12917326-12917384)
chr3 (25-90)||(6003133-6003198)
chr3 (50-91)||(12155089-12155130)
chr3 (31-91)||(12150993-12151053)
chr3 (59-91)||(13522353-13522385)
[»] chr1 (28 HSPs)
chr1 (1-334)||(28476750-28477084)
chr1 (1-326)||(24719526-24719852)
chr1 (1-297)||(12710623-12710903)
chr1 (182-334)||(20822732-20822884)
chr1 (182-334)||(20836536-20836688)
chr1 (1-93)||(38056688-38056780)
chr1 (1-68)||(50544841-50544908)
chr1 (86-286)||(41931146-41931354)
chr1 (22-90)||(24007261-24007330)
chr1 (25-90)||(39061268-39061333)
chr1 (5-71)||(22145686-22145752)
chr1 (1-93)||(8276005-8276097)
chr1 (1-90)||(8306552-8306642)
chr1 (1-91)||(34392713-34392804)
chr1 (1-48)||(17901810-17901857)
chr1 (1-63)||(6834150-6834212)
chr1 (2-91)||(20588581-20588673)
chr1 (2-91)||(20593119-20593211)
chr1 (33-91)||(40390096-40390155)
chr1 (25-87)||(21188073-21188135)
chr1 (33-93)||(14294858-14294919)
chr1 (25-90)||(20708098-20708163)
chr1 (1-91)||(45499487-45499578)
chr1 (33-93)||(51131317-51131378)
chr1 (27-60)||(14792604-14792637)
chr1 (27-60)||(21243799-21243832)
chr1 (1-45)||(635020-635064)
chr1 (27-90)||(38887128-38887191)
[»] scaffold0878 (1 HSPs)
scaffold0878 (1-334)||(3438-3772)
[»] chr5 (18 HSPs)
chr5 (1-327)||(660499-660825)
chr5 (1-334)||(1627083-1627418)
chr5 (1-326)||(23199223-23199549)
chr5 (5-334)||(18744583-18744906)
chr5 (5-87)||(16063701-16063783)
chr5 (21-87)||(6551326-6551392)
chr5 (30-96)||(21504081-21504147)
chr5 (1-91)||(32607332-32607423)
chr5 (2-91)||(21398661-21398752)
chr5 (33-91)||(24068175-24068234)
chr5 (23-89)||(21398833-21398904)
chr5 (59-91)||(22111923-22111955)
chr5 (27-90)||(26762350-26762413)
chr5 (25-91)||(26749978-26750044)
chr5 (27-60)||(1626959-1626992)
chr5 (27-60)||(14025848-14025881)
chr5 (33-93)||(36315305-36315366)
chr5 (27-90)||(8833247-8833310)
[»] chr2 (29 HSPs)
chr2 (1-326)||(21315492-21315820)
chr2 (3-326)||(21369002-21369327)
chr2 (1-326)||(21335282-21335610)
chr2 (1-300)||(23610356-23610662)
chr2 (137-334)||(29114465-29114662)
chr2 (159-330)||(23165877-23166052)
chr2 (159-330)||(23577134-23577309)
chr2 (27-95)||(28652593-28652662)
chr2 (25-90)||(25584302-25584367)
chr2 (25-91)||(19647180-19647246)
chr2 (1-91)||(28345004-28345092)
chr2 (1-90)||(149517-149610)
chr2 (21-91)||(34491276-34491350)
chr2 (25-87)||(20006010-20006072)
chr2 (25-87)||(45535876-45535938)
chr2 (59-91)||(25584186-25584218)
chr2 (137-218)||(45573375-45573455)
chr2 (137-218)||(45577042-45577122)
chr2 (137-218)||(45580709-45580789)
chr2 (137-218)||(45584376-45584456)
chr2 (137-218)||(45588043-45588123)
chr2 (137-218)||(45591710-45591790)
chr2 (137-218)||(45595377-45595457)
chr2 (137-218)||(45599044-45599124)
chr2 (137-218)||(45602711-45602791)
chr2 (137-218)||(45606378-45606458)
chr2 (137-218)||(45610045-45610125)
chr2 (137-218)||(45613712-45613792)
chr2 (137-218)||(45617379-45617459)
[»] scaffold0369 (1 HSPs)
scaffold0369 (7-334)||(15637-15965)
[»] chr6 (24 HSPs)
chr6 (2-326)||(20410529-20410852)
chr6 (21-119)||(15998806-15998905)
chr6 (137-334)||(17856412-17856610)
chr6 (94-333)||(16386528-16386764)
chr6 (82-185)||(21686158-21686262)
chr6 (122-265)||(15515249-15515393)
chr6 (94-257)||(31160273-31160437)
chr6 (1-82)||(21683091-21683171)
chr6 (1-75)||(19825502-19825576)
chr6 (17-93)||(18982515-18982592)
chr6 (25-91)||(1818899-1818965)
chr6 (25-87)||(24506155-24506217)
chr6 (1-81)||(23658044-23658125)
chr6 (27-95)||(25601371-25601437)
chr6 (1-91)||(10446162-10446253)
chr6 (7-85)||(34140477-34140554)
chr6 (30-90)||(18982362-18982422)
chr6 (27-90)||(7217285-7217347)
chr6 (1-48)||(29045260-29045307)
chr6 (43-85)||(34153128-34153170)
chr6 (27-90)||(31734655-31734718)
chr6 (27-81)||(22557204-22557259)
chr6 (27-90)||(23431488-23431551)
chr6 (156-263)||(26520329-26520437)
[»] scaffold0203 (1 HSPs)
scaffold0203 (21-326)||(17976-18284)
[»] scaffold0162 (1 HSPs)
scaffold0162 (35-326)||(23932-24224)
[»] scaffold0032 (1 HSPs)
scaffold0032 (21-326)||(61884-62195)
[»] scaffold0231 (1 HSPs)
scaffold0231 (1-285)||(17537-17822)
[»] scaffold0414 (1 HSPs)
scaffold0414 (1-326)||(11176-11504)
[»] scaffold0853 (1 HSPs)
scaffold0853 (1-259)||(2470-2729)
[»] scaffold0056 (2 HSPs)
scaffold0056 (1-188)||(18123-18311)
scaffold0056 (184-334)||(15880-16030)
[»] scaffold0516 (2 HSPs)
scaffold0516 (184-329)||(7522-7667)
scaffold0516 (21-188)||(5341-5512)
[»] scaffold0183 (1 HSPs)
scaffold0183 (94-289)||(11120-11316)
[»] scaffold0468 (1 HSPs)
scaffold0468 (156-334)||(10939-11118)
[»] scaffold0298 (2 HSPs)
scaffold0298 (240-334)||(274-368)
scaffold0298 (1-61)||(361-421)
[»] scaffold0180 (2 HSPs)
scaffold0180 (240-334)||(10485-10579)
scaffold0180 (1-61)||(10572-10631)
[»] scaffold1278 (1 HSPs)
scaffold1278 (94-330)||(1456-1692)
[»] scaffold0676 (2 HSPs)
scaffold0676 (1-87)||(2831-2917)
scaffold0676 (25-90)||(2762-2828)
[»] scaffold0452 (1 HSPs)
scaffold0452 (157-289)||(2760-2892)
[»] scaffold0247 (1 HSPs)
scaffold0247 (1-91)||(1022-1112)
[»] scaffold1204 (1 HSPs)
scaffold1204 (157-289)||(65-197)
[»] scaffold0017 (2 HSPs)
scaffold0017 (20-95)||(26669-26744)
scaffold0017 (25-87)||(23564-23626)
[»] scaffold0331 (1 HSPs)
scaffold0331 (93-268)||(5718-5896)
[»] scaffold0213 (2 HSPs)
scaffold0213 (21-90)||(19154-19223)
scaffold0213 (38-83)||(19115-19160)
[»] scaffold0007 (4 HSPs)
scaffold0007 (17-93)||(16451-16528)
scaffold0007 (5-93)||(18721-18811)
scaffold0007 (30-90)||(18902-18962)
scaffold0007 (30-90)||(16619-16679)
[»] scaffold0220 (1 HSPs)
scaffold0220 (1-93)||(13893-13985)
[»] scaffold0505 (1 HSPs)
scaffold0505 (1-95)||(4878-4972)
[»] scaffold0205 (1 HSPs)
scaffold0205 (90-270)||(8084-8264)
[»] scaffold0061 (2 HSPs)
scaffold0061 (1-87)||(14602-14689)
scaffold0061 (1-87)||(23660-23747)
[»] scaffold0125 (1 HSPs)
scaffold0125 (25-95)||(28493-28564)
[»] scaffold1256 (1 HSPs)
scaffold1256 (21-72)||(2236-2287)
[»] scaffold0347 (2 HSPs)
scaffold0347 (122-264)||(7017-7159)
scaffold0347 (136-194)||(4543-4601)
[»] scaffold0058 (1 HSPs)
scaffold0058 (25-87)||(59695-59757)
[»] scaffold0328 (1 HSPs)
scaffold0328 (1-93)||(18656-18749)
[»] scaffold0112 (1 HSPs)
scaffold0112 (90-262)||(13314-13488)
[»] scaffold0139 (2 HSPs)
scaffold0139 (26-90)||(40204-40268)
scaffold0139 (1-68)||(23503-23570)
[»] scaffold0379 (1 HSPs)
scaffold0379 (1-91)||(10893-10983)
[»] scaffold0337 (1 HSPs)
scaffold0337 (25-87)||(3155-3217)
[»] scaffold0092 (1 HSPs)
scaffold0092 (25-87)||(38481-38543)
[»] scaffold0014 (1 HSPs)
scaffold0014 (121-271)||(113711-113860)
[»] scaffold0555 (1 HSPs)
scaffold0555 (1-91)||(8762-8853)
[»] scaffold0431 (1 HSPs)
scaffold0431 (1-90)||(5578-5669)
[»] scaffold0261 (1 HSPs)
scaffold0261 (35-95)||(6468-6529)
[»] scaffold0174 (3 HSPs)
scaffold0174 (6-63)||(11590-11647)
scaffold0174 (1-91)||(19801-19892)
scaffold0174 (5-46)||(5445-5486)
[»] scaffold0098 (1 HSPs)
scaffold0098 (5-91)||(40052-40139)
[»] scaffold0047 (1 HSPs)
scaffold0047 (137-250)||(19888-20001)
[»] scaffold1518 (1 HSPs)
scaffold1518 (122-265)||(275-419)
[»] scaffold0594 (1 HSPs)
scaffold0594 (1-63)||(2221-2283)
[»] scaffold0394 (1 HSPs)
scaffold0394 (29-87)||(7557-7615)
[»] scaffold0217 (1 HSPs)
scaffold0217 (25-91)||(28660-28726)
[»] scaffold0021 (2 HSPs)
scaffold0021 (25-87)||(17057-17118)
scaffold0021 (25-87)||(26588-26649)
[»] scaffold1939 (1 HSPs)
scaffold1939 (30-91)||(74-135)
[»] scaffold0462 (2 HSPs)
scaffold0462 (41-90)||(1264-1313)
scaffold0462 (41-90)||(6770-6819)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-91)||(127359-127450)
[»] scaffold0108 (1 HSPs)
scaffold0108 (1-60)||(6395-6454)
[»] scaffold0086 (3 HSPs)
scaffold0086 (1-63)||(35202-35264)
scaffold0086 (7-96)||(35507-35597)
scaffold0086 (7-63)||(35358-35413)
[»] scaffold0004 (2 HSPs)
scaffold0004 (17-63)||(66104-66150)
scaffold0004 (1-53)||(111344-111396)
[»] scaffold0184 (1 HSPs)
scaffold0184 (33-93)||(377-438)
[»] scaffold0059 (1 HSPs)
scaffold0059 (26-87)||(49680-49741)
[»] scaffold0385 (1 HSPs)
scaffold0385 (27-90)||(293-356)
[»] scaffold0020 (1 HSPs)
scaffold0020 (27-90)||(174169-174232)
[»] scaffold0461 (1 HSPs)
scaffold0461 (59-90)||(12433-12464)
[»] scaffold0120 (1 HSPs)
scaffold0120 (33-91)||(29257-29316)
[»] scaffold1800 (1 HSPs)
scaffold1800 (25-87)||(558-620)
[»] scaffold0165 (1 HSPs)
scaffold0165 (29-87)||(31880-31938)
[»] scaffold0630 (1 HSPs)
scaffold0630 (27-90)||(9011-9074)
[»] scaffold0439 (1 HSPs)
scaffold0439 (59-91)||(12256-12288)
[»] scaffold0371 (1 HSPs)
scaffold0371 (27-90)||(10487-10550)
[»] scaffold0145 (1 HSPs)
scaffold0145 (33-76)||(8085-8129)
[»] scaffold0063 (1 HSPs)
scaffold0063 (27-90)||(62666-62729)


Alignment Details
Target: scaffold1186 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 334
Target Start/End: Complemental strand, 2056 - 1724
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcatt 100  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  2056 ctagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcgtt 1957  T
Q  101 cataatctttgtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgtt 200  Q
    |||||||||| |||||||| |||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1956 cataatctttttataatct-tttttctaattctaaccataagtgcttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgtt 1858  T
Q  201 ttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgct 300  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  1857 ttgatgcgatgtttgggtatttgaatttgatgttaattaagttgctgatgatgaatttacatgctcaagatatgtatatatgtatacttgtgtttttgct 1758  T
Q  301 caaaattggtggagtataatgttgttgttgatga 334  Q
    ||||||| ||| ||||||||||||||||||||||    
T  1757 caaaatttgtgaagtataatgttgttgttgatga 1724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 334
Target Start/End: Original strand, 186212 - 186544
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcatt 100  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  186212 ctagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcgtt 186311  T
Q  101 cataatctttgtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgtt 200  Q
    |||||||||| |||||||| |||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  186312 cataatctttttataatct-tttttctaattctaaccataagtgcttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgtt 186410  T
Q  201 ttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgct 300  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  186411 ttgatgcgatgtttgggtatttgaatttgatgttaattaagttgctgatgatgaatttacatgctcaagatatgtatatatgtatacttgtgtttttgct 186510  T
Q  301 caaaattggtggagtataatgttgttgttgatga 334  Q
    ||||||| ||| ||||||||||||||||||||||    
T  186511 caaaatttgtgaagtataatgttgttgttgatga 186544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 274; Significance: 1e-153; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 334
Target Start/End: Complemental strand, 14631171 - 14630839
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcatt 100  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  14631171 ctagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcgtt 14631072  T
Q  101 cataatctttgtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgtt 200  Q
    |||||||||| |||||||| |||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14631071 cataatctttttataatct-tttttctaattctaaccataagtgcttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgtt 14630973  T
Q  201 ttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgct 300  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  14630972 ttgatgcgatgtttgggtatttgaatttgatgttaattaagttgctgatgatgaatttacatgctcaagatatgtatatatgtatacttgtgtttttgct 14630873  T
Q  301 caaaattggtggagtataatgttgttgttgatga 334  Q
    ||||||| ||| ||||||||||||||||||||||    
T  14630872 caaaatttgtgaagtataatgttgttgttgatga 14630839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 334
Target Start/End: Complemental strand, 26446243 - 26445909
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcatt 100  Q
    ||||||||||||||  ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26446243 ctagctttctctaataatgggttgtataattctgaaaaatggtttaatcttgtagttgttgttagttttgatgttatagaaattagggttagatttcatt 26446144  T
Q  101 cataatcttt-gtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgt 199  Q
    |||||||||| ||||||| ||||||||||||||||  ||||||||  ||||||||||||||||||| ||||||||||||||||||||||  |||||||||    
T  26446143 cataatcttttgtataatatctttttctacttctacccataagtgcctatttgtataaagtgattactgtggatttaattggtgaaatttgtgcttatgt 26446044  T
Q  200 tttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgc 299  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| || |||||||||||| |||| ||||||||||||||||||    
T  26446043 tttgatgcaatgtttggatatgtgaatttgatgttaattaagttgttgatgatgaatttatattctcaagttatgtatataagtatacttgtgtttttgc 26445944  T
Q  300 tcaaaattggtggagtataatgttgttgttgatga 334  Q
    |||||||||||| ||||||||||||||||||||||    
T  26445943 tcaaaattggtgaagtataatgttgttgttgatga 26445909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 21 - 334
Target Start/End: Original strand, 2424423 - 2424737
Alignment:
Q  21 gttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcattcataatcttt-gtataatct 119  Q
    ||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  2424423 gttgtataattttgaaaaagggtttaatcttgtagttgttattagttttgatgttatagaaattagggttcgatttcattcataatcttttgtataatct 2424522  T
Q  120 ctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggta 219  Q
     ||||||||||||||  ||||||||  ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  2424523 atttttctacttctacccataagtgcctatttgtataaagtgattattgtggatttaattggtgaaatttgtgcttatgttttgatgcaatgtttgggta 2424622  T
Q  220 tttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgctcaaaattggtggagtataa 319  Q
    | |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  2424623 tgtgaatttgatgttaattaagttgttgatgatgaatttatatgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattggtgaagtataa 2424722  T
Q  320 tgttgttgttgatga 334  Q
    |||||||||||||||    
T  2424723 tgttgttgttgatga 2424737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 25513887 - 25513702
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcatt 100  Q
    ||||||||||||||  ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25513887 ctagctttctctaataatgagttgtataattctgaaaaagggtttaacattgtagttgttgttagttttgatgttatagaaattagggttagatttcatt 25513788  T
Q  101 cataatc-tttgtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaa 185  Q
    ||||||| |||||||||||| ||||||||||||||  ||||||||  |||||||||||||||||||||||||||| ||||||||||    
T  25513787 cataatcttttgtataatctatttttctacttctacccataagtgcctatttgtataaagtgattattgtggattaaattggtgaa 25513702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 146 - 330
Target Start/End: Original strand, 10237232 - 10237416
Alignment:
Q  146 ttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgt 245  Q
    |||||||||||||||||||||| || | ||||||| |||||||| || ||||| |||||||  |||||||||||| |||| |||||||||||||||||||    
T  10237232 ttatttgtataaagtgattattatgaaattaattgatgaaattcgtggttatgctttgatgtgatgtttgggtatgtgaaattgatgttaattaagttgt 10237331  T
Q  246 tgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgctcaaaattggtggagtataatgttgttgttg 330  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||| ||||||    
T  10237332 tgatgaagaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattgatgaagtataatgttattgttg 10237416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 94 - 289
Target Start/End: Original strand, 19622093 - 19622288
Alignment:
Q  94 tttcattcataatcttt-gtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatg 192  Q
    ||||||||||||||||| ||||| ||||||||||| |||  |  ||||||||||||||||||||||||||||||| || ||||||||| |||||||| ||    
T  19622093 tttcattcataatcttttgtata-tctctttttcttcttaaatccataagtgtttatttgtataaagtgattattatgaatttaattgatgaaattcgtg 19622191  T
Q  193 cttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatactt 289  Q
    |||||| ||||||| ||||||||||||| | |||||  || |||| |||||||| |||||||| ||||||||||||  ||||| |||||||||||||    
T  19622192 cttatgctttgatgtaatgtttgggtatgtcaatttattgataatcaagttgttaatgatgaaattacatgctcaatatatgtttatatgtatactt 19622288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 240 - 327
Target Start/End: Complemental strand, 17143005 - 17142918
Alignment:
Q  240 agttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgctcaaaattggtggagtataatgttgttg 327  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17143005 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattggtgaagtataatgttgttg 17142918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 157 - 289
Target Start/End: Original strand, 54363268 - 54363400
Alignment:
Q  157 aagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaat 256  Q
    ||||||||||| || ||||||||| |||||||| |||||||| |||||||  |||||||||||| |||||||| || |||| |||||||||||||||||     
T  54363268 aagtgattattttgaatttaattgatgaaattcgtgcttatgctttgatgtgatgtttgggtatatgaatttgttgataatcaagttgttgatgatgaaa 54363367  T
Q  257 ttacatgctcaagttatgtctatatgtatactt 289  Q
    ||||||||||||  ||||| |||||||||||||    
T  54363368 ttacatgctcaatatatgtttatatgtatactt 54363400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 240 - 334
Target Start/End: Original strand, 15747842 - 15747935
Alignment:
Q  240 agttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgctcaaaattggtggagtataatgttgttgttgatga 334  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||    
T  15747842 agttgttgatgatgaatatacatgctcaagttatgtatatatgtatacttgtg-ttttgctcaaaattggtgaagtataatgttgatgttgatga 15747935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 100 - 271
Target Start/End: Original strand, 19080175 - 19080346
Alignment:
Q  100 tcataatct-ttgtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatg 198  Q
    ||||||||| |||||||||||||||| ||||||  |  |||||||| ||| ||||  ||||||||||||||| ||||| ||||| |||||| || | |||    
T  19080175 tcataatctcttgtataatctctttt-ctacttaaacccataagtgcttaattgtgcaaagtgattattgtgaatttatttggttaaattcgtgttcatg 19080273  T
Q  199 ttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagtt 271  Q
    | |||||||||||||||||||| ||||||| ||| |||||||||| |||||| ||| |||||||||| |||||    
T  19080274 tgttgatgcaatgtttgggtatatgaatttaatgataattaagttattgatgttgactttacatgcttaagtt 19080346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 157 - 289
Target Start/End: Original strand, 15213598 - 15213730
Alignment:
Q  157 aagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaat 256  Q
    ||||||||| | || ||||||||| | |||||| |||||||| |||||||  |||||||||||| |||||||| || |||| |||||||||||||||||     
T  15213598 aagtgattagtttgaatttaattgataaaattcgtgcttatgctttgatgtgatgtttgggtatatgaatttgttgataatcaagttgttgatgatgaaa 15213697  T
Q  257 ttacatgctcaagttatgtctatatgtatactt 289  Q
    ||||||||||||  ||||| |||||||||||||    
T  15213698 ttacatgctcaatatatgtttatatgtatactt 15213730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 35660992 - 35660906
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 87  Q
    ||||||||||||||  ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||  |||||||    
T  35660992 ctagctttctctaataatgggttgtataattatgaaaaatggtttaaccttgtagttgttgttagttttgatgttatatgaattagg 35660906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 16296974 - 16296897
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttata 78  Q
    ||||||||||||||  ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16296974 ctagctttctctaataatgagttgtataattctgaaaaagggtttaacctggtagttgttgttagttttgatgttata 16296897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 157 - 286
Target Start/End: Original strand, 17375278 - 17375407
Alignment:
Q  157 aagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaat 256  Q
    ||||||||||| || ||||||||| |||||||| |||||||| |||||||  |||||||||||| |||||||| || |||| |||||||||| ||||||     
T  17375278 aagtgattattttgaatttaattgatgaaattcgtgcttatgctttgatgtgatgtttgggtatatgaatttgttgataatcaagttgttgaggatgaaa 17375377  T
Q  257 ttacatgctcaagttatgtctatatgtata 286  Q
    |||  |||||||  ||||| ||||||||||    
T  17375378 ttatctgctcaatatatgtttatatgtata 17375407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 45314124 - 45314193
Alignment:
Q  27 taattctgaaaaagggtttaacctt-gtagttgttgttagttttgatgttatagaaattagggttagatt 95  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||    
T  45314124 taattctgaaaaagggtttaacatttgtagttgttgttagttttgatgttatagagattagggttagatt 45314193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 9639046 - 9638954
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttaga 93  Q
    ||||||||||||||  ||| ||||| ||||||||||||||||||||||||||||||||||| || |||||||||| | | ||||||| |||||    
T  9639046 ctagctttctctaataatgagttgtgtaattctgaaaaagggtttaaccttgtagttgttgataattttgatgttttgggaattaggtttaga 9638954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 33186939 - 33186850
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 90  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||  || ||||||||||| ||| ||||||||||    
T  33186939 ctagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtggttgttaataggttttgatgttgtag-aattagggtt 33186850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 26921550 - 26921619
Alignment:
Q  27 taattctgaaaaagggtttaacctt-gtagttgttgttagttttgatgttatagaaattagggttagatt 95  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||| ||||| ||||||||||||||    
T  26921550 taattctgaaaaagggtttaacatttgtagttgttgttagttttgatgtcatagagattagggttagatt 26921619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 15747793 - 15747849
Alignment:
Q  5 ctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 61  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  15747793 ctttctctaaagatgagttgtataattctgaaaaagggtttaacattgtagttgttg 15747849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 15239832 - 15239927
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaacc-ttgtagttgttgttagttttgatgttatagaaattagggttagatt 95  Q
    ||||||||||||||  |||  |||||||| ||||||||||||||||||| || ||||||| ||| ||||||| |||||||| ||||||||||||||    
T  15239832 ctagctttctctaataatgaattgtataaatctgaaaaagggtttaacctttatagttgtcgttggttttgaggttatagagattagggttagatt 15239927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 283 - 334
Target Start/End: Original strand, 16025917 - 16025968
Alignment:
Q  283 tatacttgtgtttttgctcaaaattggtggagtataatgttgttgttgatga 334  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16025917 tatacttgtgtttttgctcaaaattggtgaagtataatgttgttgttgatga 16025968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 17143057 - 17142998
Alignment:
Q  2 tagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 61  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||    
T  17143057 tagctttctctaaagatgagttgtataattctgaaaaggggtttaacattgtagttgttg 17142998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 14477644 - 14477578
Alignment:
Q  25 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||||||||| | |||||||| |||| ||||||||||||||||||| |||||||||    
T  14477644 tataattctgaaaaagggtttgatcttgtagtcgttgatagttttgatgttatagaagttagggtta 14477578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 9622525 - 9622434
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||  ||||||||| | ||||| |||| ||||||||| | || ||||||  |||||||||||||||||||||||||||||||    
T  9622525 ctagctttctctaataatgggttgtctgattctaaaaaggggtttaacat-gttgttgttttgttagttttgatgttatagaaattagggtta 9622434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 12424306 - 12424397
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctg--aaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 90  Q
    ||||||||||||||  ||||||||||||||||||  |||||||||||||| |||||||||||  || ||||||||||| ||| ||||||||||    
T  12424306 ctagctttctctaataatgggttgtataattctgaaaaaaagggtttaactttgtagttgttaataggttttgatgttgtag-aattagggtt 12424397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 55583232 - 55583141
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||  ||||||||||| ||| | |||| ||||||||| | || ||||||  |||||||||||||||||||||||||||||||    
T  55583232 ctagctttctctaataatgggttgtatgattataaaaaggggtttaacat-gttgttgttttgttagttttgatgttatagaaattagggtta 55583141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 18463036 - 18462974
Alignment:
Q  25 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 87  Q
    |||||||||||||||||||||||  |||||||||||  |||||||||||||||| || |||||    
T  18463036 tataattctgaaaaagggtttaattttgtagttgttaatagttttgatgttataaaagttagg 18462974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 12623327 - 12623264
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 90  Q
    |||| |||||||||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  12623327 taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 12623264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 19565959 - 19566022
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 90  Q
    |||| |||||||||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  19565959 taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 19566022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 46741210 - 46741147
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgtt-gttagttttgatgttatagaaattagggtt 90  Q
    |||| |||||||||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  46741210 taatcctgaaaaagggtttaaccttgtagttgttaattggttttgatgttgtag-aattagggtt 46741147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 90
Target Start/End: Complemental strand, 16296850 - 16296819
Alignment:
Q  59 ttgttagttttgatgttatagaaattagggtt 90  Q
    ||||||||||||||||||||||||||||||||    
T  16296850 ttgttagttttgatgttatagaaattagggtt 16296819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 20150830 - 20150771
Alignment:
Q  33 tgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtta 91  Q
    ||||||||| ||||||||||||||||||  || |||||||||||| ||| ||||||||||    
T  20150830 tgaaaaaggatttaaccttgtagttgttaataggttttgatgttaaagagattagggtta 20150771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13847237 - 13847193
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggttt 45  Q
    ||||||||||||||  ||||||||||||||||| ||||| |||||    
T  13847237 ctagctttctctaataatgggttgtataattctaaaaaatggttt 13847193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 265; Significance: 1e-148; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 18816311 - 18816619
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcatt 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18816311 ctagctttctctaaaaatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcatt 18816410  T
Q  101 cataatcttt-gtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgt 199  Q
    |||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||   |||||||||    
T  18816411 cataatcttttgtataatctctttttctacttctactcataagtgtctatttgtataaagtgattattgtggatttaattggtgaaatatgtgcttatgt 18816510  T
Q  200 tttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgc 299  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  18816511 tttgatgcaatgtttgggtatgtgaatttgatgttaattaagttgttgatgatgaatttatatgctcaagttatgtatatatgtatacttgtgtttttgc 18816610  T
Q  300 tcaaaattg 308  Q
    |||||||||    
T  18816611 tcaaaattg 18816619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 334
Target Start/End: Complemental strand, 21514727 - 21514393
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcatt 100  Q
    |||| |||||||||  ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21514727 ctagatttctctaataatgagttgtataattcttaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcatt 21514628  T
Q  101 cataatcttt-gtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgt 199  Q
    |||||||||| ||||||||||||||| ||||||||  ||||||||  ||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  21514627 cataatcttttgtataatctctttttatacttctacccataagtgcctatttgtataaagtgattattgtggatttaattggtgaaatttgtgcttatgt 21514528  T
Q  200 tttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgc 299  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||| |    
T  21514527 tttgatgcaatgtttgggtacgtgaatttgatgttaattaagttgttgatgatgaaattatatgctcaagttatgtatatatgtatacttgtgttttttc 21514428  T
Q  300 tcaaaattggtggagtataatgttgttgttgatga 334  Q
    |||||||||||| ||||||||||||||||||||||    
T  21514427 tcaaaattggtgaagtataatgttgttgttgatga 21514393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 21 - 326
Target Start/End: Original strand, 4380653 - 4380951
Alignment:
Q  21 gttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcattcataatcttt-gtataatct 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4380653 gttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatct 4380752  T
Q  120 ctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggta 219  Q
    |||||||||||||||| | ||        |||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||| |||    
T  4380753 ctttttctacttctaagccta--------tttgtataaagtgattattgtgaatttaattggtgaaatttgtgcttatgttttgatgcaatgtttgagta 4380844  T
Q  220 tttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgctcaaaattggtggagtataa 319  Q
    | |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| |    
T  4380845 tgtgaatttgatgttaattaagttgttgatgatgaatttatatgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattcgtgaagtatta 4380944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 137 - 327
Target Start/End: Complemental strand, 22366289 - 22366099
Alignment:
Q  137 cataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaa 236  Q
    |||||||| |||||||||||||||||||||| || | ||||||| |||||||| |||||||| ||||||| ||||||||| ||| |||||||||||||||    
T  22366289 cataagtgcttatttgtataaagtgattattatgaaattaattgatgaaattcgtgcttatgctttgatgtaatgtttggatatgtgaatttgatgttaa 22366190  T
Q  237 ttaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgctcaaaattggtggagtataatgttgttg 327  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22366189 ttaagttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattggtgaagtataatgttgttg 22366099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 137 - 334
Target Start/End: Complemental strand, 22723471 - 22723274
Alignment:
Q  137 cataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaa 236  Q
    |||||||| |||||||||||||||||||||| || | ||||||| |||||||| |||||||||||||||| ||||||||||||| |||||||||||||||    
T  22723471 cataagtgcttatttgtataaagtgattattatgaaattaattgatgaaattcgtgcttatgttttgatgtaatgtttgggtatgtgaatttgatgttaa 22723372  T
Q  237 ttaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgctcaaaattggtggagtataatgttgttgttgatga 334  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| || |||||  |||| ||||||||||    
T  22723371 ttaagttgttgatgatgaatttacatgcttaagttatgtatatatgtatacttgtgtttttgctcaaaattgatgaagtattttgttattgttgatga 22723274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 240 - 334
Target Start/End: Original strand, 38184981 - 38185075
Alignment:
Q  240 agttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgctcaaaattggtggagtataatgttgttgttgatga 334  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38184981 agttattgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattggtgaagtataatgttgttgttgatga 38185075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 240 - 334
Target Start/End: Original strand, 20494569 - 20494663
Alignment:
Q  240 agttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgctcaaaattggtggagtataatgttgttgttgatga 334  Q
    ||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||    
T  20494569 agttgttgatgataaatttacatgctcaagttatgtatatatgtaaacttgtgtttttgctcaaaattggtgaagtataatattgttgttgatga 20494663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 86 - 289
Target Start/End: Complemental strand, 24239960 - 24239756
Alignment:
Q  86 gggttagatttcattcataatcttt--gtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtg 183  Q
    |||||||||||||||||||||| ||  || |||| ||||   ||| |||||  |||||||| ||| ||| |  ||||||||||| || ||||||||  ||    
T  24239960 gggttagatttcattcataatcctttagtttaatttcttcc-ctaattctatgcataagtgcttaattgaaataagtgattattttgaatttaattaatg 24239862  T
Q  184 aaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgt 283  Q
    ||||||||||||||| |||||||  |||||||||||| |||||||| || |||| ||||| ||||||||||| ||||||||||||  ||||| |||||||    
T  24239861 aaattcatgcttatgctttgatgtgatgtttgggtatatgaatttgttgataatcaagttcttgatgatgaaattacatgctcaatatatgtttatatgt 24239762  T
Q  284 atactt 289  Q
    ||||||    
T  24239761 atactt 24239756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 36732428 - 36732514
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 87  Q
    ||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  36732428 ctagctttctctaataatgggttgtataattctgaaaaagagtttaaccttgtagttgttgttagttttgatgttataggaattagg 36732514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 18023572 - 18023632
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18023572 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaacattgtagttgttg 18023632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 22208305 - 22208216
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 90  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  22208305 ctagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 22208216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 38184928 - 38184984
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagtt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  38184928 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaacattgtagtt 38184984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 12577896 - 12577826
Alignment:
Q  21 gttgtataattctgaaaaagggtttaaccttg-tagttgttgttagttttgatgttatagaaattagggtt 90  Q
    |||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||    
T  12577896 gttgtataattccgaaaaagggtttaacctttatagttgttgttagttttgatgttatagagattagggtt 12577826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 21676614 - 21676704
Alignment:
Q  7 ttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttca 98  Q
    ||||||||  ||||||| ||||||| ||||| |||||||||| |||||||||||| |||||||||| |||||||||||||| ||| ||||||    
T  21676614 ttctctaataatgggtt-tataattatgaaatagggtttaactttgtagttgttgatagttttgatattatagaaattaggtttaaatttca 21676704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 21399753 - 21399662
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||  ||||||||||| ||||| |||| ||||||||| | || ||||||  |||||||||||||||||||||||||||||||    
T  21399753 ctagctttctctaataatgggttgtatgattctaaaaaggggtttaacat-gttgttgttttgttagttttgatgttatagaaattagggtta 21399662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 21794246 - 21794155
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||  ||||||||||| ||||| |||| ||||||||| | || ||||||  |||||||||||||||||||||||||||||||    
T  21794246 ctagctttctctaataatgggttgtatgattctaaaaaggggtttaacat-gttgttgttttgttagttttgatgttatagaaattagggtta 21794155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 267 - 334
Target Start/End: Complemental strand, 24907986 - 24907917
Alignment:
Q  267 aagttatgtctatatgt--atacttgtgtttttgctcaaaattggtggagtataatgttgttgttgatga 334  Q
    ||||||||| |||||||  |||||||||||||| |||||||||| || ||||||||||||||||||||||    
T  24907986 aagttatgtatatatgtgtatacttgtgttttttctcaaaattgatgaagtataatgttgttgttgatga 24907917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 22258322 - 22258403
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaa 81  Q
    ||||||||||||||  ||| ||||||||||||  |||||||||||||||||| |||||||| || ||||||||||| |||||    
T  22258322 ctagctttctctaataatgagttgtataattccaaaaaagggtttaaccttgcagttgttgataggttttgatgttgtagaa 22258403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 21678867 - 21678946
Alignment:
Q  7 ttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 87  Q
    ||||||||  ||||||| ||||||| ||||| |||||||||| |||||||||||| |||||||||| |||||| |||||||    
T  21678867 ttctctaataatgggtt-tataattatgaaatagggtttaactttgtagttgttgatagttttgatattatagcaattagg 21678946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 22483822 - 22483775
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaac 48  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||    
T  22483822 ctagctttctctaataatgggttgtataattctgaaaaagggtttaac 22483775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 137 - 255
Target Start/End: Complemental strand, 16002291 - 16002174
Alignment:
Q  137 cataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaa 236  Q
    |||||||| ||||||| |||| ||||||||| || | ||| ||| |||||||||||||  |||| |||||  ||||||| |||| ||||||||||| |||    
T  16002291 cataagtgcttatttgaataa-gtgattattttgcacttagttgttgaaattcatgctcttgttatgatgatatgtttgagtatatgaatttgatgataa 16002193  T
Q  237 ttaagttgttgatgatgaa 255  Q
    || | |||||| |||||||    
T  16002192 tttaattgttgttgatgaa 16002174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 18834458 - 18834371
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||  |||| |||||| ||||| |||| ||||||||| | || ||| |||||||||||||||||||||||||||||||||    
T  18834458 ctagctttctctaataatggattgtatgattct-aaaaggggtttaacat-gttgtt-ttgttagttttgatgttatagaaattagggtta 18834371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 23884205 - 23884116
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaaattagggtta 91  Q
    |||||||||||||||  |||||||||| ||||| |||| ||||||||| | || ||| ||  |||||||||||||||||||||||||||||||    
T  23884205 ctagctttctctaaa--tgggttgtatgattctaaaaaggggtttaacat-gttgttcttttgttagttttgatgttatagaaattagggtta 23884116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 18023647 - 18023684
Alignment:
Q  297 tgctcaaaattggtggagtataatgttgttgttgatga 334  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  18023647 tgctcaaaattggtgaagtataatgttgttgttgatga 18023684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 21676521 - 21676585
Alignment:
Q  7 ttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgat 72  Q
    ||||||||  ||||||| ||||||| ||||| |||||||||| |||||||||||| ||||||||||    
T  21676521 ttctctaataatgggtt-tataattatgaaatagggtttaactttgtagttgttgatagttttgat 21676585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 21579247 - 21579310
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 90  Q
    |||| |||||||||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  21579247 taatcctgaaaaagggtttaaccttgtagttgttaatatgttttgatgttgtag-aattagggtt 21579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 22474767 - 22474704
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 90  Q
    |||| |||||||||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  22474767 taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 22474704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 12037205 - 12037260
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgttgttag-ttttgatgttatagaa 81  Q
    |||| |||||||||||||||||||||||||||||  ||| |||||||||| |||||    
T  12037205 taatcctgaaaaagggtttaaccttgtagttgttaatagcttttgatgttgtagaa 12037260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 22610287 - 22610371
Alignment:
Q  5 ctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtta 91  Q
    ||||||||||  ||| ||||||| ||||| |||| ||||||||| |  || ||  |||||||||||||||||||||||||| |||||    
T  22610287 ctttctctaataatgagttgtatgattctaaaaaggggtttaacatgttattt--tgttagttttgatgttatagaaattatggtta 22610371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 22966815 - 22966756
Alignment:
Q  33 tgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||||||||||||||||  || |||||||||||| ||  ||||||||||    
T  22966815 tgaaaaagggtttaaccttgtagttgttaataggttttgatgttaaagcgattagggtta 22966756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 29762909 - 29762964
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgtt-gttagttttgatgttatagaa 81  Q
    |||| |||||||||||||||||||||||||||||  | |||||||||||| |||||    
T  29762909 taatcctgaaaaagggtttaaccttgtagttgttaataagttttgatgttgtagaa 29762964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 22483970 - 22483912
Alignment:
Q  5 ctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtt 63  Q
    ||||||||||  ||| ||||||||||||| |||||||||||||| | || |||||||||    
T  22483970 ctttctctaataatgagttgtataattcttaaaaagggtttaacatggttgttgttgtt 22483912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 21697509 - 21697566
Alignment:
Q  35 aaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtta 91  Q
    |||||||||||||| |||||||||||  || |||||||||||| ||| ||||||||||    
T  21697509 aaaaagggtttaacattgtagttgttaataggttttgatgttaaagagattagggtta 21697566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 17978457 - 17978520
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 90  Q
    |||| |||||||||| ||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  17978457 taatcctgaaaaaggatttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 17978520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 240 - 268
Target Start/End: Original strand, 18023625 - 18023653
Alignment:
Q  240 agttgttgatgatgaatttacatgctcaa 268  Q
    |||||||||||||||||||||||||||||    
T  18023625 agttgttgatgatgaatttacatgctcaa 18023653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 41680174 - 41680237
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 90  Q
    |||| |||| ||||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  41680174 taatcctgataaagggtttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 41680237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 263; Significance: 1e-146; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 334
Target Start/End: Complemental strand, 47095488 - 47095154
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcatt 100  Q
    ||||||||||||||  |||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  47095488 ctagctttctctaataatgggttgaataattctgaaaaatggtttaaccttgtagttgttgttaggtttgatgttatagaaattagggttaaatttcatt 47095389  T
Q  101 cataatcttt-gtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgt 199  Q
    |||||||||| |||||| |||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  47095388 cataatcttttgtataaactctttttctacttctacccataagtgtctatttgtataaagtgattattgtggatttaattggtgaaatttgtgcttatgt 47095289  T
Q  200 tttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgc 299  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  47095288 tttgatgcaatgtttgggtatgtgaatttgatgttaattaagttgttgatgatgaatttatatgctcaagttatgtatatatgtatacttgtgtttttgc 47095189  T
Q  300 tcaaaattggtggagtataatgttgttgttgatga 334  Q
    |||||||||||| ||||||||||||||||||||||    
T  47095188 tcaaaattggtgaagtataatgttgttgttgatga 47095154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 15575665 - 15575991
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcatt 100  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15575665 ctagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtacttgttgttagttttgatgttatagaaattagggttagatttcatt 15575764  T
Q  101 cataatcttt-gtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgt 199  Q
    |||||||||| ||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15575765 cataatcttttgtataatctctttttctacttctacccataagtgcttatttgtataaagtgattattgtggatttaatcggtgaaattcatgcttatgt 15575864  T
Q  200 tttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgc 299  Q
    ||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||    
T  15575865 tttgatgcaatgtttggatatgttaatttgatgttaattaagttgttgatgatgaatttatctgctcaagttatgtatatatgtatacttgtgtttttgc 15575964  T
Q  300 tcaaaattggtggagtataatgttgtt 326  Q
    |||||||| ||| ||||| ||||||||    
T  15575965 tcaaaattcgtgaagtatgatgttgtt 15575991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 334
Target Start/End: Complemental strand, 43745692 - 43745358
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcatt 100  Q
    ||||||||||||||  ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43745692 ctagctttctctaataatgagttgtataattatgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagagttagatttcatt 43745593  T
Q  101 cataatcttt-gtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgt 199  Q
    |||||||||| ||||||||||||||||||||||||  ||||||||  |||||||||||||||||||||||||||||||||||||||||   |||||||||    
T  43745592 cataatcttttgtataatctctttttctacttctacccataagtgcctatttgtataaagtgattattgtggatttaattggtgaaatctgtgcttatgt 43745493  T
Q  200 tttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgc 299  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||| ||||||||    
T  43745492 tttgatgcaatgtttgggtatgtgaatttgatgttaattaagttgttgatgatgaatttatatggtcaagttatgtatatatgtatacttgagtttttgc 43745393  T
Q  300 tcaaaattggtggagtataatgttgttgttgatga 334  Q
    |||||||||||| ||||||||||||||||||||||    
T  43745392 tcaaaattggtgaagtataatgttgttgttgatga 43745358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 21 - 334
Target Start/End: Original strand, 4690699 - 4691011
Alignment:
Q  21 gttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcattcataatcttt-gtataatct 119  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4690699 gttgtataattctgaaaaagggtttaaccttgtagttgttattacttttgatgttatagaaattagggttagatttcattcataatcttttgtataatct 4690798  T
Q  120 ctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggta 219  Q
    | |||||||||||||  ||||||| |  |||||||||||||||||||| |||||||| |||||||||||  ||||||||||||||||||||||||| |||    
T  4690799 cattttctacttctacccataagtct--atttgtataaagtgattattatggatttagttggtgaaatttgtgcttatgttttgatgcaatgtttgagta 4690896  T
Q  220 tttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgctcaaaattggtggagtataa 319  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||    
T  4690897 tgtgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtatttttgctcaaaattggtgaagtataa 4690996  T
Q  320 tgttgttgttgatga 334  Q
    |||||||||||||||    
T  4690997 tgttgttgttgatga 4691011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 1 - 335
Target Start/End: Original strand, 20252198 - 20252538
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcatt 100  Q
    ||||||||||||||  ||| |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||||    
T  20252198 ctagctttctctaataatgagttgtataattctgaaaaagggtttaacattgtagttgttattagttttaatgttatagaaattaggattagatttcatt 20252297  T
Q  101 cat----aatcttt-gtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgctt 195  Q
    |||    ||||||| ||||||||| ||||||||||||||  ||||||||  ||||||||||||||||||||||||||||||||| ||||||||  |||||    
T  20252298 cattcataatcttttgtataatctatttttctacttctacccataagtgcctatttgtataaagtgattattgtggatttaattagtgaaatttgtgctt 20252397  T
Q  196 atgttttgatgcaatgtttg-ggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtt 294  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  20252398 atgttttgatgcaatgtttgaggtatgtgaatttgatgttaattaagctgttgatgatgaatttatatgctcaagttatgtatatatgtatacttgtgtt 20252497  T
Q  295 tttgctcaaaattggtggagtataatgttgttgttgatgat 335  Q
    ||||||||||||||||| ||||| |||||||| || |||||    
T  20252498 tttgctcaaaattggtgaagtatgatgttgttttttatgat 20252538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 18874681 - 18875003
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaa--gggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttca 98  Q
    ||||||||||||||  |||||||||||||||||||||||  ||||||||||||||||||| |   |||||||||||||||||||||||||||||||||||    
T  18874681 ctagctttctctaataatgggttgtataattctgaaaaaaggggtttaaccttgtagttggt---agttttgatgttatagaaattagggttagatttca 18874777  T
Q  99 ttcataatcttt-gtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttat 197  Q
    |||||||||||| |||||||||||||||||   ||||  ||||||||  ||||||||||||||||||||||||||||||||||||||||||  || ||||    
T  18874778 ttcataatcttttgtataatctctttttct---tctacccataagtgcctatttgtataaagtgattattgtggatttaattggtgaaatttgtgtttat 18874874  T
Q  198 gttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgttttt 297  Q
    ||||||||||||||||||||||| | ||||||||||||||||| || ||||||||||||||| ||||||||||||||| ||||||||||||||| |||||    
T  18874875 gttttgatgcaatgtttgggtatgtaaatttgatgttaattaaattattgatgatgaatttatatgctcaagttatgtatatatgtatacttgtattttt 18874974  T
Q  298 gctcaaaattggtggagtataatgttgtt 326  Q
    |||||||||||||| ||||| ||||||||    
T  18874975 gctcaaaattggtgaagtatgatgttgtt 18875003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 48212743 - 48213027
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaa--gggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttca 98  Q
    ||||||||||| ||  || |||||||| ||||| |||||  ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  48212743 ctagctttctccaataataggttgtatgattctaaaaaaaggggtttaacattgtaattgttgttagttttgatgttatagaaattagggttagatttca 48212842  T
Q  99 ttcataatcttt-gtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttat 197  Q
    |||||||||||| ||||||||||||||||||||||||  || |||||| ||||||||||||||||||||||||||||||||||||||||||   ||||||    
T  48212843 ttcataatcttttgtataatctctttttctacttctacccaaaagtgtctatttgtataaagtgattattgtggatttaattggtgaaatttgggcttat 48212942  T
Q  198 gttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgt 283  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||    
T  48212943 gttt-gatgcaatgtttgggtatgtgaatttgatgttaattaagttgttgatgatgaatttatatgctcaagttatatatatatgt 48213027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 138 - 334
Target Start/End: Original strand, 18079452 - 18079648
Alignment:
Q  138 ataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaat 237  Q
    ||||||| ||| ||| |||| ||||||||| || | ||||||| |||||||| |||||||| ||||||| ||| ||||||||| |||| |||||||||||    
T  18079452 ataagtgcttacttggataaggtgattattatgaaattaattgatgaaattcgtgcttatgctttgatgtaatatttgggtatgtgaaattgatgttaat 18079551  T
Q  238 taagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgctcaaaattggtggagtataatgttgttgttgatga 334  Q
    | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||    
T  18079552 tgagttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattggtgaaatataatgttattgttgatga 18079648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 16186928 - 16186815
Alignment:
Q  22 ttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcattcataatc-tttgtataatctc 120  Q
    |||||||||||||||||||||||||||||| | ||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  16186928 ttgtataattctgaaaaagggtttaaccttatggttgttagtagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctc 16186829  T
Q  121 tttttctacttcta 134  Q
    ||||||| ||||||    
T  16186828 tttttcttcttcta 16186815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 240 - 334
Target Start/End: Complemental strand, 34958328 - 34958234
Alignment:
Q  240 agttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgctcaaaattggtggagtataatgttgttgttgatga 334  Q
    |||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34958328 agttgttgatgatgaatttacatgctcaagttagatatatatgtatacttgtgtttttgctcaaaattggtgaagtataatgttgttgttgatga 34958234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 85 - 334
Target Start/End: Original strand, 16368271 - 16368522
Alignment:
Q  85 agggttagatttcattcataatctt--tgtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggt 182  Q
    |||||||| ||||||||||||||||  |||||||||| |||| |||||||||  |||||||| ||| ||||  ||| |||||||| ||  |||||||| |    
T  16368271 agggttagttttcattcataatcttcttgtataatctatttt-ctacttctacccataagtgcttaattgtgcaaattgattattatgactttaattgat 16368369  T
Q  183 gaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatg 282  Q
    ||||||| ||||||||  |||||| ||||||||| ||| ||||||||||||  |||||||| ||||||||||| |||||| ||| |  | | | || |||    
T  16368370 gaaattcgtgcttatgccttgatgtaatgtttggatatgtgaatttgatgtggattaagttattgatgatgaaattacatactctatatgtatatacatg 16368469  T
Q  283 tatac-ttgtgtttttgctcaaaattggtggagtataatgttgttgttgatga 334  Q
    ||||| |||||||||  |||||||||| || | ||||| ||||||||||||||    
T  16368470 tatactttgtgttttcactcaaaattgatgaaatataacgttgttgttgatga 16368522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 240 - 334
Target Start/End: Original strand, 831919 - 832012
Alignment:
Q  240 agttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgctcaaaattggtggagtataatgttgttgttgatga 334  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||    
T  831919 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtg-ttttgctcaaaatgggtgaagtataatgttgttgttgatga 832012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 240 - 334
Target Start/End: Original strand, 1197099 - 1197192
Alignment:
Q  240 agttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgctcaaaattggtggagtataatgttgttgttgatga 334  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||    
T  1197099 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtg-ttttgctcaaaatgggtgaagtataatgttgttgttgatga 1197192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 15307582 - 15307448
Alignment:
Q  136 tcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgtta 235  Q
    ||||||||||||| ||||| ||||||||||||||| |||||||||||||||||  ||||  | |||||||   ||||||| |||| ||||||||||| ||    
T  15307582 tcataagtgtttaattgtagaaagtgattattgtgaatttaattggtgaaatttgtgctcttattttgataatatgtttgagtatgtgaatttgatgata 15307483  T
Q  236 attaagttgttgatgatgaatttacatgctcaagt 270  Q
    ||||||||||||||| |||||||||||||||||||    
T  15307482 attaagttgttgatgttgaatttacatgctcaagt 15307448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 160 - 273
Target Start/End: Complemental strand, 19070133 - 19070020
Alignment:
Q  160 tgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaattta 259  Q
    |||| |||||| |||||||||||||||||| |||| || | |||||||||||||||| ||| ||||||||||| |||||||||||||||||||||| |||    
T  19070133 tgatcattgtgaatttaattggtgaaattcgtgctcatatgttgatgcaatgtttggatatatgaatttgatggtaattaagttgttgatgatgaaatta 19070034  T
Q  260 catgctcaagttat 273  Q
    ||||||||||||||    
T  19070033 catgctcaagttat 19070020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 708445 - 708537
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttaga 93  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||    
T  708445 ctagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgctgttagttttgatgttataggaattaggtttaga 708537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 157 - 289
Target Start/End: Complemental strand, 16383957 - 16383825
Alignment:
Q  157 aagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaat 256  Q
    ||||||||||| |  ||||||||| ||||||||||||||||| |||||||  |||||||||||| |||||||| || |||| |||||||||||||||||     
T  16383957 aagtgattattttatatttaattgatgaaattcatgcttatgctttgatgtgatgtttgggtatatgaatttgttgataatcaagttgttgatgatgaaa 16383858  T
Q  257 ttacatgctcaagttatgtctatatgtatactt 289  Q
    ||||||||||||  ||| | |||||||||||||    
T  16383857 ttacatgctcaatatatttttatatgtatactt 16383825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 19195647 - 19195562
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 87  Q
    ||||||||||||||  ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  19195647 ctagctttctctaataatgagttgtataattctgaaaa-gggtttaaccttgtagttgttgttagttttgatgttataggaattagg 19195562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 15700751 - 15700840
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||  |||||||||||  |||| |||| ||||||||| | |||||||||||||||||| |||||||||||||||||||||    
T  15700751 ctagctttctctaataatgggttgtatggttctaaaaaggggtttaacat-gtagttgttgttagttttaatgttatagaaattagggtta 15700840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 136 - 265
Target Start/End: Complemental strand, 12192602 - 12192473
Alignment:
Q  136 tcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgtta 235  Q
    ||||||||| ||| ||||  ||||||||||||||| ||||| ||   ||||||| ||||  | ||||| ||| |||||||||||| ||||||||||| ||    
T  12192602 tcataagtgcttaattgtgaaaagtgattattgtgaatttatttttggaaattcgtgctcttattttggtgctatgtttgggtatatgaatttgatgata 12192503  T
Q  236 attaagttgttgatgatgaatttacatgct 265  Q
    ||||||| ||||||| |||| |||||||||    
T  12192502 attaagtagttgatgttgaaattacatgct 12192473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34958381 - 34958321
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 61  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||    
T  34958381 ctagctttctctaaagatgagttgtataattctgaaaaaggatttaacattgtagttgttg 34958321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 831866 - 831926
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 61  Q
    |||| ||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||    
T  831866 ctagttttctctaaagatgggttgtacaattctaaaaaagggtttaacattgtagttgttg 831926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1197046 - 1197106
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 61  Q
    |||| ||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||    
T  1197046 ctagttttctctaaagatgggttgtacaattctaaaaaagggtttaacattgtagttgttg 1197106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 8513773 - 8513828
Alignment:
Q  5 ctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 60  Q
    ||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||    
T  8513773 ctttctctaataatgggttgtataattctaaaaaagggtttaaccttgtagttgtt 8513828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 58429 - 58517
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||  ||||||||||| ||||| |||| ||||||||| | || ||| |||||||||||||||||| ||||||||||||||    
T  58429 ctagctttctctaataatgggttgtatgattctaaaaaggggtttaacat-gttgtt-ttgttagttttgatgttaaagaaattagggtta 58517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 42565872 - 42565934
Alignment:
Q  25 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 87  Q
    ||||||||||||||||||||||| ||||||||||||| || ||||| |||||||||| |||||    
T  42565872 tataattctgaaaaagggtttaatcttgtagttgttgataattttgttgttatagaagttagg 42565934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 8930786 - 8930872
Alignment:
Q  6 tttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaaattagggtta 91  Q
    |||||||||  ||||||||||| ||||| |||| ||||||||| | || ||||||  |||||||||||||||||||||||||||||||    
T  8930786 tttctctaataatgggttgtatgattctaaaaaggggtttaacat-gttgttgttttgttagttttgatgttatagaaattagggtta 8930872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 8488114 - 8488169
Alignment:
Q  5 ctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 60  Q
    ||||||||||  ||||||||||||||||| ||||||||||||||||| ||||||||    
T  8488114 ctttctctaataatgggttgtataattctaaaaaagggtttaaccttatagttgtt 8488169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 25943303 - 25943213
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgt-tagttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||  |||||||||||  || |||||| ||||||||| || | |||||| | |||||||||||||||||||||||||||||    
T  25943303 ctagctttctctaataatgggttgtatgtttttgaaaaggggtttaacatt-tcgttgttttgtagttttgatgttatagaaattagggtta 25943213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 38299784 - 38299738
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaa 47  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||    
T  38299784 ctagctttctctaataatgggttgtataattctgaaaaagggtttaa 38299738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 43276764 - 43276848
Alignment:
Q  5 ctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 90  Q
    ||||||||||  |||||||||||||||||| |||| ||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  43276764 ctttctctaataatgggttgtataattctg-aaaatggtttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 43276848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 15720815 - 15720724
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaaattagggtta 91  Q
    |||||||||||| |  ||||||||||| ||||| |||| ||||||||| | || ||||||  ||||||||||||||||||||||||| |||||    
T  15720815 ctagctttctctcataatgggttgtatgattctaaaaaggggtttaacat-gttgttgttttgttagttttgatgttatagaaattatggtta 15720724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 33556121 - 33556211
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||  ||||||||||| ||||| |||| |||||||||   |||| ||| ||||||| |||||||||||||||||||||||||    
T  33556121 ctagctttctctaataatgggttgtatgattctaaaaaggggtttaacatgttgttgtt-ttgttag-tttgatgttatagaaattagggtta 33556211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 289
Target Start/End: Complemental strand, 25124402 - 25124272
Alignment:
Q  157 aagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaat 256  Q
    |||||||||||  | ||||||||| |||| ||| |||| ||| || ||||  |||||||||||| |||||||  || |||| |||||||||||||||||     
T  25124402 aagtgattatttcgaatttaattgatgaatttcgtgctcatgctt-gatgtgatgtttgggtatatgaatttt-tgataatcaagttgttgatgatgaaa 25124305  T
Q  257 ttacatgctcaagttatgtctatatgtatactt 289  Q
    || |||||||||   |||| |||||||||||||    
T  25124304 ttgcatgctcaatacatgtttatatgtatactt 25124272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 13744526 - 13744614
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||  ||||||| ||| ||||| |||| ||||||||| | || ||| |||||| |||| |||||||||||||||||||||    
T  13744526 ctagctttctctaataatgggttttatgattctaaaaaggggtttaacat-gttgtt-ttgttatttttaatgttatagaaattagggtta 13744614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 16496215 - 16496154
Alignment:
Q  33 tgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaattagggttaga 93  Q
    ||||||| ||||||||||||||||||| ||||| ||||| | ||| ||||||||||||||||    
T  16496215 tgaaaaatggtttaaccttgtagttgtcgttaggtttgaggattagagaaattagggttaga 16496154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 9743120 - 9743183
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgtt-gttagttttgatgttatagaaattagggtt 90  Q
    |||| |||||||||||||||||||||||||||||  | |||||||||||| ||| ||||||||||    
T  9743120 taatcctgaaaaagggtttaaccttgtagttgttaataagttttgatgttgtag-aattagggtt 9743183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 334
Target Start/End: Original strand, 3192149 - 3192227
Alignment:
Q  257 ttacatgctcaagttatgtctatatgtatac-ttgtgtttttgctcaaaattggtggagtataatgttgttgttgatga 334  Q
    ||||||||||||| | ||| ||||||||||| |||||||||   ||||||||| || |  |||||||||||||||||||    
T  3192149 ttacatgctcaagatgtgtgtatatgtatactttgtgttttcattcaaaattgatgaaaaataatgttgttgttgatga 3192227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 15119354 - 15119411
Alignment:
Q  33 tgaaaaagggtttaaccttgtagttgttgttag-ttttgatgttatagaaattagggtt 90  Q
    ||||||||||||||||||||||||||||  ||| |||||||||| ||| ||||||||||    
T  15119354 tgaaaaagggtttaaccttgtagttgttaatagattttgatgttgtag-aattagggtt 15119411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 18570683 - 18570592
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaacct--tgtagttgttgttagttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||  ||||||||||  |||||  ||| ||||||||| |  ||| ||| ||||||||||||||||||||||| ||| |||||    
T  18570683 ctagctttctctaataatgggttgtaagattctagaaaggggtttaacatattgttgtt-ttgttagttttgatgttatagaagttatggtta 18570592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 19283088 - 19283051
Alignment:
Q  5 ctttctctaaagatgggttgtataattctgaaaaaggg 42  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  19283088 ctttctctaagaatgggttgtataattctgaaaaaggg 19283051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 14160897 - 14160960
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 90  Q
    |||| ||||||| |||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  14160897 taatcctgaaaaggggtttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 14160960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 14318083 - 14318020
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 90  Q
    |||| ||||||||||||||||||||| |||||||  || ||||||||||| ||| ||||||||||    
T  14318083 taatcctgaaaaagggtttaaccttgcagttgttaataggttttgatgttgtag-aattagggtt 14318020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 259; Significance: 1e-144; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 326
Target Start/End: Complemental strand, 17208560 - 17208234
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcatt 100  Q
    ||||||||||||||  ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17208560 ctagctttctctaataatgagttgtataattctgaaaaaggatttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcatt 17208461  T
Q  101 cataatcttt-gtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgt 199  Q
    |||||||||| ||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  17208460 cataatcttttgtataatctctttttcttcttctattcataagtgtctatttgtataaagtgattattgtggatttaattggtgaaatttgtgcttatgt 17208361  T
Q  200 tttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgc 299  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||    
T  17208360 tttgatgcaatgtttgggtatgtgaatttgatgttaattaagttgttgatgatgattttatatgctcaagttatgtatatatgtatacttgtgtttttgc 17208261  T
Q  300 tcaaaattggtggagtataatgttgtt 326  Q
    |||||||||||| ||||| ||||||||    
T  17208260 tcaaaattggtgaagtatgatgttgtt 17208234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 1 - 326
Target Start/End: Complemental strand, 14520482 - 14520156
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcatt 100  Q
    |||||||||| |||  ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |    
T  14520482 ctagctttctttaataatgggttgtataattctaaaaaaaggtttaaccttgtagttgttgttagttttgatgttataaaaattagggttaaatttcact 14520383  T
Q  101 cataatcttt-gtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgt 199  Q
    |||||||||| ||||||||||||||||||||||||  ||||||||  ||||||||||||||||||||||||||||||||||||||||||  || ||||||    
T  14520382 cataatcttttgtataatctctttttctacttctacccataagtgcctatttgtataaagtgattattgtggatttaattggtgaaatttgtgtttatgt 14520283  T
Q  200 tttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgc 299  Q
    ||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||    
T  14520282 tttgatgcaatgtttggatatgtgattttgatgttaattaagttgttgatgatgaatttatatgcttaagttatgtatatatgtatacttgtgtttttgc 14520183  T
Q  300 tcaaaattggtggagtataatgttgtt 326  Q
    |||||||||||| | ||| ||||||||    
T  14520182 tcaaaattggtgaaatatgatgttgtt 14520156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 5 - 334
Target Start/End: Complemental strand, 24547232 - 24546902
Alignment:
Q  5 ctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaaattagggttagatttcattca 102  Q
    ||||||||||  ||||||||||| ||||| |||| | ||||||| | || ||||||  |||||||| |||||||||||||||||||||||||||||||||    
T  24547232 ctttctctaataatgggttgtatgattctaaaaaggagtttaacat-gttgttgttttgttagttt-gatgttatagaaattagggttagatttcattca 24547135  T
Q  103 taatcttt-gtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttt 201  Q
    |||||||| ||||||||||||||||||||||||  ||||||||  ||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  24547134 taatcttttgtataatctctttttctacttctacccataagtgcctatttgtataaagtgattattgtggatttaattggtgaaatttgtgcttatgttt 24547035  T
Q  202 tgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgctc 301  Q
    | ||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||| |    
T  24547034 taatgtaatatttgggtatgtgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtattgttgccc 24546935  T
Q  302 aaaattggtggagtataatgttgttgttgatga 334  Q
    |||||||||| ||||||||||||||||||||||    
T  24546934 aaaattggtgaagtataatgttgttgttgatga 24546902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 17 - 334
Target Start/End: Original strand, 24548986 - 24549301
Alignment:
Q  17 atgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcattcataatcttt-gtata 115  Q
    ||||||||||| ||||| |||| ||||||||  | || ||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||| |    
T  24548986 atgggttgtatgattctaaaaaggggtttaatat-gttgtt-ttgttagttt-gatgttatagaaattagggttagatttcattcataatattttgtaca 24549082  T
Q  116 atctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttg 215  Q
    |||||||||||||||||||  ||||||||  |||||| ||||||| |||||||||||||||||||||||||||  |||||||||||| ||||||| ||||    
T  24549083 atctctttttctacttctacccataagtgcctatttgcataaagtaattattgtggatttaattggtgaaatttgtgcttatgttttaatgcaatatttg 24549182  T
Q  216 ggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgctcaaaattggtggagt 315  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||| ||||||||||| |||    
T  24549183 ggtatgtgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtattcttgcccaaaattggtgaagt 24549282  T
Q  316 ataatgttgttgttgatga 334  Q
    |||||||||||||||||||    
T  24549283 ataatgttgttgttgatga 24549301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 137 - 334
Target Start/End: Original strand, 25103946 - 25104125
Alignment:
Q  137 cataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaa 236  Q
    |||||||| |||||||||||||||||||||| || | ||||||| |||||||| |||||||||||||||| |||||||| |||| |||||||||          
T  25103946 cataagtgcttatttgtataaagtgattattatgaaattaattgatgaaattcgtgcttatgttttgatgtaatgtttgagtatgtgaatttga------ 25104039  T
Q  237 ttaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgctcaaaattggtggagtataatgttgttgttgatga 334  Q
                ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| || | ||||||||||||||||||||    
T  25104040 ------------tgatgaatttacatgctcaagttatgtatatatgtatacttgtatttttgctcaaaattgatgaactataatgttgttgttgatga 25104125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 240 - 334
Target Start/End: Original strand, 2247935 - 2248029
Alignment:
Q  240 agttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgctcaaaattggtggagtataatgttgttgttgatga 334  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  2247935 agttgttgatgatgaatttacatgctcaagttatgtatatatgcatacttatgtttttgctcaaaattggtgaagtataatgttgttgttgatga 2248029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 157 - 289
Target Start/End: Original strand, 17758582 - 17758714
Alignment:
Q  157 aagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaat 256  Q
    ||||||||||| || | ||||||| |||||||| ||||| || |||||||  |||||||||||| |||||||| || |||| |||||||||||||||||     
T  17758582 aagtgattattttgaagttaattgatgaaattcgtgcttgtgctttgatgtgatgtttgggtatatgaatttgttgataatcaagttgttgatgatgaaa 17758681  T
Q  257 ttacatgctcaagttatgtctatatgtatactt 289  Q
    ||||||||||||  ||||| |||||||||||||    
T  17758682 ttacatgctcaatatatgtttatatgtatactt 17758714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 157 - 289
Target Start/End: Original strand, 19059902 - 19060034
Alignment:
Q  157 aagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaat 256  Q
    ||||||||||| || | ||||||| |||||||| ||||| || |||||||  |||||||||||| |||||||| || |||| |||||||||||||||||     
T  19059902 aagtgattattttgaagttaattgatgaaattcgtgcttgtgctttgatgtgatgtttgggtatatgaatttgttgataatcaagttgttgatgatgaaa 19060001  T
Q  257 ttacatgctcaagttatgtctatatgtatactt 289  Q
    ||||||||||||  ||||| |||||||||||||    
T  19060002 ttacatgctcaatatatgtttatatgtatactt 19060034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 29907675 - 29907582
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaattagggttaga 93  Q
    |||||||||| |||   |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||    
T  29907675 ctagctttctttaatattgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatgattagagaaattagggttaga 29907582  T

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Target: chr3; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 29948841 - 29948748
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaattagggttaga 93  Q
    |||||||||| |||   |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||    
T  29948841 ctagctttctttaatattgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatgattagagaaattagggttaga 29948748  T

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Target: chr3; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 29997995 - 29997902
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaattagggttaga 93  Q
    |||||||||| |||   |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||    
T  29997995 ctagctttctttaatattgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatgattagagaaattagggttaga 29997902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 14641565 - 14641656
Alignment:
Q  2 tagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttaga 93  Q
    |||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| | | ||||||| |||||    
T  14641565 tagctttctctaataatgggttgtataattctaaaaaagggtttaaccttgtagttgttgttagtattgatgttttgggaattaggtttaga 14641656  T

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Target: chr3; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 112 - 271
Target Start/End: Complemental strand, 20421114 - 20420956
Alignment:
Q  112 tataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatg 211  Q
    ||||||||||||| ||||||  | ||||||||| ||| ||||  ||||||||||||||| |||||| ||||||  ||| ||||  | |||| |||| |||    
T  20421114 tataatctctttt-ctacttaaattcataagtgcttaattgtgaaaagtgattattgtgaatttaaatggtgattttcgtgctcttattttaatgctatg 20421016  T
Q  212 tttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagtt 271  Q
    |||| |||| ||||||||||| ||||||||||| ||||| |||||||||||||| |||||    
T  20421015 tttgagtatgtgaatttgatgataattaagttggtgatgttgaatttacatgcttaagtt 20420956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 2247882 - 2247942
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2247882 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaacattgtagttgttg 2247942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 22841295 - 22841390
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaac---cttgtagttg--ttgttagttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||    |||| ||||  ||||||||||||| |||||||||||||||||||    
T  22841295 ctagctttctctaataatgggttgtataattctgaaaaagggtttaacatgattgttgttgttttgttagttttgaggttatagaaattagggtta 22841390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 21845691 - 21845762
Alignment:
Q  25 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagattt 96  Q
    |||| |||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||| || |||||    
T  21845691 tatagttctgaaaaagggtttaagcttgtagttgttaatagttttgatgttatagaaattaggttttgattt 21845762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 14152415 - 14152504
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgtt-gttagttttgatgttatagaaattagggtt 90  Q
    ||||||||||||||  ||| ||||||| |||||||||||||||||||||||||||||||| ||  ||||||||||| ||| ||||||||||    
T  14152415 ctagctttctctaataatgagttgtatcattctgaaaaagggtttaaccttgtagttgttagtaggttttgatgttgtag-aattagggtt 14152504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 50350855 - 50350928
Alignment:
Q  25 tataattctgaaaaa--gggtttaacctt-gtagttgttgttagttttgatgttatagaaattagggttagatt 95  Q
    |||||||||||||||  |||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||    
T  50350855 tataattctgaaaaaaggggtttaacctttgtagtttttgttagttttgatgttatagagattagggttagatt 50350928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 17669714 - 17669805
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||  ||||||||||| ||||| |||| ||||||||| | || ||||||  |||||||||||||||||||||||||||||||    
T  17669714 ctagctttctctaataatgggttgtatgattctaaaaaggggtttaacat-gttgttgttttgttagttttgatgttatagaaattagggtta 17669805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 160 - 289
Target Start/End: Original strand, 40038907 - 40039036
Alignment:
Q  160 tgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaattta 259  Q
    |||||||| || ||||||||| | |||||| || || || |||||||  |||||| ||||| |||||||  || |||| ||||||||||||||||| |||    
T  40038907 tgattattttgaatttaattgataaaattcgtgtttgtgctttgatgtgatgtttaggtatatgaatttattgataatcaagttgttgatgatgaaatta 40039006  T
Q  260 catgctcaagttatgtctatatgtatactt 289  Q
    |||| ||||  ||||| |||||||||||||    
T  40039007 catgttcaatatatgtttatatgtatactt 40039036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 54875490 - 54875581
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||  ||||||||||| ||||| |||| ||||||||| | || ||||||  |||||||||||||||||||||||||||||||    
T  54875490 ctagctttctctaataatgggttgtatgattctaaaaaggggtttaacat-gttgttgttttgttagttttgatgttatagaaattagggtta 54875581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 3160666 - 3160728
Alignment:
Q  25 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 87  Q
    ||||||||| |||| ||||||||| |||||||||||| |||||||||| ||||||||||||||    
T  3160666 tataattctaaaaatgggtttaactttgtagttgttgatagttttgatattatagaaattagg 3160728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 3527173 - 3527261
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||  ||||||||||| ||| | |||| ||||||||| | || ||| |||||||||||||||||||||||||||||||||    
T  3527173 ctagctttctctaataatgggttgtatgattttaaaaaggggtttaacat-gttgtt-ttgttagttttgatgttatagaaattagggtta 3527261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 5215683 - 5215594
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 90  Q
    ||||||||||||||  ||| ||||||||||| ||||||||||||||||||||||||| ||  || ||||||||||| ||| ||||||||||    
T  5215683 ctagctttctctaataatgagttgtataattatgaaaaagggtttaaccttgtagttattaataggttttgatgttgtag-aattagggtt 5215594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 6159438 - 6159350
Alignment:
Q  4 gctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaaattagggtta 91  Q
    |||||||||||  ||||||||||| ||||| |||| ||||||||| | || ||||||  |||||||||||||||||||||||||||||||    
T  6159438 gctttctctaataatgggttgtatgattctaaaaaggggtttaacat-gttgttgttttgttagttttgatgttatagaaattagggtta 6159350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 45803347 - 45803409
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtt 63  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||| | || |||||||||    
T  45803347 ctagctttctctaataatgggttgtataattctgaaaaagggtttaacatcgttgttgttgtt 45803409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 48631344 - 48631278
Alignment:
Q  25 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtta 91  Q
    |||| |||||||||||||||||| ||||||||||||  ||||||||||||||||||| | |||||||    
T  48631344 tatagttctgaaaaagggtttaagcttgtagttgttaatagttttgatgttatagaagtcagggtta 48631278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 6156746 - 6156656
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||  ||||||||||| ||||| |||| ||||||||| | || ||||||  |||||||||||||||||||||||||||||||    
T  6156746 ctagctttctctaataatgggttgtatgattct-aaaaggggtttaacat-gttgttgttttgttagttttgatgttatagaaattagggtta 6156656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 17684867 - 17684942
Alignment:
Q  17 atgggttgtataattctgaaaaagggtttaac--cttgtagttgttgttagttttgatgttatagaaattagggtta 91  Q
    ||||||||||| ||||| |||| |||||||||  ||||| ||| |||||||||||||||||||||||||||||||||    
T  17684867 atgggttgtatgattctaaaaaggggtttaacatcttgttgtt-ttgttagttttgatgttatagaaattagggtta 17684942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 15566760 - 15566721
Alignment:
Q  21 gttgtataattctgaaaaagggtttaaccttgtagttgtt 60  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  15566760 gttgtataattctgaaaaagggtttaaccttgtagttgtt 15566721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 2841522 - 2841613
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||  ||||||||||| ||||| ||||  |||||||| | || ||||||  |||||||||||||||||||||||||| ||||    
T  2841522 ctagctttctctaataatgggttgtatgattctaaaaagaggtttaacat-gttgttgttttgttagttttgatgttatagaaattagagtta 2841613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 13520449 - 13520408
Alignment:
Q  46 aaccttgtagttgttgttagttttgatgttatagaaattagg 87  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  13520449 aaccttgtagttgttgttagttttgatgttataggaattagg 13520408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 14442211 - 14442120
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaaattagggtta 91  Q
    |||||||||| |||  ||||||||||| ||||| ||||  |||||||| | || ||||||  |||||||||||||||||||||||||||||||    
T  14442211 ctagctttctgtaataatgggttgtatgattctaaaaagcggtttaacat-gttgttgttttgttagttttgatgttatagaaattagggtta 14442120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 172 - 289
Target Start/End: Original strand, 51961126 - 51961242
Alignment:
Q  172 atttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagtt 271  Q
    ||||||||| |||| ||| |||| ||| |||||||  |||||||||||| |||||||   | |||| ||||||||||||||||| || |||||||||       
T  51961126 atttaattgatgaatttcgtgctcatgctttgatgtgatgtttgggtatatgaattttc-gataatcaagttgttgatgatgaaattgcatgctcaatac 51961224  T
Q  272 atgtctatatgtatactt 289  Q
    |||| |||||||||||||    
T  51961225 atgtttatatgtatactt 51961242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 50755274 - 50755360
Alignment:
Q  5 ctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttg--ttgttagttttgatgttatagaaattagggtt 90  Q
    ||||||||||  |||| |||||| ||||| |||| ||||||||| | || ||||  ||||||||||||||||||||||||||||||||    
T  50755274 ctttctctaataatggattgtatgattctaaaaaggggtttaacat-gttgttgctttgttagttttgatgttatagaaattagggtt 50755360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 255
Target Start/End: Complemental strand, 11402935 - 11402766
Alignment:
Q  86 gggttagatttcattcataatcttt--gtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtg 183  Q
    ||||||||||||||||||||||| |  || | || |||| | ||| |||||  || ||||| ||||||| |||| |||||||||||| | ||||||| ||    
T  11402935 gggttagatttcattcataatctcttagtttcatttcttct-ctagttctatgcacaagtgcttatttgaataa-gtgattattgtgaacttaattgttg 11402838  T
Q  184 aaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaa 255  Q
    |||||| |||| || || |  ||  ||||||| |||| ||||||||||| ||||| | |||||| |||||||    
T  11402837 aaattcgtgctcatattatagtgatatgtttgagtatatgaatttgatgataattgaattgttgttgatgaa 11402766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 53646100 - 53646163
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 90  Q
    |||| |||||||||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  53646100 taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 53646163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 54330348 - 54330411
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 90  Q
    |||| |||||||||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  54330348 taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 54330411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 12917326 - 12917384
Alignment:
Q  5 ctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtt 63  Q
    ||||||||||  ||||||||||| ||||| |||||||||||||| | || |||||||||    
T  12917326 ctttctctaataatgggttgtatgattctaaaaaagggtttaacatggttgttgttgtt 12917384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 6003198 - 6003133
Alignment:
Q  25 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtt 90  Q
    ||||||||||||||||||  |||| |||  ||||||| || || |||||||| |||||||||||||    
T  6003198 tataattctgaaaaaggggctaactttgatgttgttgataattgtgatgttaaagaaattagggtt 6003133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 91
Target Start/End: Original strand, 12155089 - 12155130
Alignment:
Q  50 ttgtagttgttgttagttttgatgttatagaaattagggtta 91  Q
    |||||||||||  ||||||||||||||||||| |||||||||    
T  12155089 ttgtagttgttaatagttttgatgttatagaagttagggtta 12155130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 12150993 - 12151053
Alignment:
Q  31 tctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtta 91  Q
    |||||||| || ||||  |||||| |||||  ||||||||||||||||||| |||||||||    
T  12150993 tctgaaaagggatttaggcttgtatttgttaatagttttgatgttatagaagttagggtta 12151053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 91
Target Start/End: Original strand, 13522353 - 13522385
Alignment:
Q  59 ttgttagttttgatgttatagaaattagggtta 91  Q
    |||||| ||||||||||||||||||||||||||    
T  13522353 ttgttaattttgatgttatagaaattagggtta 13522385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 259; Significance: 1e-144; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 334
Target Start/End: Original strand, 28476750 - 28477084
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcatt 100  Q
    |||| |||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28476750 ctagatttctctaataatgagttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcatt 28476849  T
Q  101 cataatcttt-gtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgt 199  Q
    |||||||||| ||||||||||||||||||||||||  ||||||||  |||||||||||||||||||||||||||||||||| ||||||   |||||||||    
T  28476850 cataatcttttgtataatctctttttctacttctacccataagtgcctatttgtataaagtgattattgtggatttaattgatgaaatatgtgcttatgt 28476949  T
Q  200 tttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgc 299  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  28476950 tttgatgcaatgtttgggtatgtgaatttgatgttaattaagttgttgatgatgaatttatatgctcaagttatgtatatatgtataattgtgtttttgc 28477049  T
Q  300 tcaaaattggtggagtataatgttgttgttgatga 334  Q
    |||||||||||| ||||||||||||||||||||||    
T  28477050 tcaaaattggtgaagtataatgttgttgttgatga 28477084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 24719526 - 24719852
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcatt 100  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||    
T  24719526 ctagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttattagttttgatgttatagaaattaaggttaaatttcatt 24719625  T
Q  101 cataatcttt-gtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgt 199  Q
    |||||||||| ||||||||| ||||||||||||||  ||||||||  |||||||||||||||| |||||||||||||||||||||||||  ||||||| |    
T  24719626 cataatcttttgtataatctttttttctacttctacccataagtgcctatttgtataaagtgactattgtggatttaattggtgaaatttgtgcttatat 24719725  T
Q  200 tttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgc 299  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||    
T  24719726 tttgatgcaatgtgtgggtatgtgaatttgatgttaattaagttgttgatgatgaatttatatgttcaagttatgtatatatgtatacttgtgtttttgc 24719825  T
Q  300 tcaaaattggtggagtataatgttgtt 326  Q
    |||||||||||| ||||| ||||||||    
T  24719826 tcaaaattggtgaagtatgatgttgtt 24719852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 12710903 - 12710623
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcatt 100  Q
    ||||||||||||||   |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  12710903 ctagctttctctaatattgggttgtataattctgaaaaagggtttaatcttgtagttgttgttagttttgatgttatagaaattaaggttagatttcatt 12710804  T
Q  101 cataatc-tttgtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgt 199  Q
    ||||||| |||||||||||||||||||||||||||  |||                 |||||||||||||| |||||||||||||||||| |||||||||    
T  12710803 cataatcttttgtataatctctttttctacttctacccat-----------------aagtgattattgtgaatttaattggtgaaattcgtgcttatgt 12710721  T
Q  200 tttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgttttt 297  Q
    ||||||||||||||||||||| ||||||| || |||| |||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||    
T  12710720 tttgatgcaatgtttgggtatgtgaatttaatattaaataagttgttgatgatgaatttacatattcaagttatgtatatatgtatacttgtgttttt 12710623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 182 - 334
Target Start/End: Complemental strand, 20822884 - 20822732
Alignment:
Q  182 tgaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatat 281  Q
    |||||||| |||||||| ||||||| ||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||    
T  20822884 tgaaattcgtgcttatgctttgatgtaatgtttgggtatgtgaatttgatgttaattaagttctcgatgatgaatttacatgctcaagttatgtatatat 20822785  T
Q  282 gtatacttgtgtttttgctcaaaattggtggagtataatgttgttgttgatga 334  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20822784 gtatacttgtgtttttgctcaaaattggtgaagtataatgttgttgttgatga 20822732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 182 - 334
Target Start/End: Complemental strand, 20836688 - 20836536
Alignment:
Q  182 tgaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatat 281  Q
    |||||||| |||||||| ||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  20836688 tgaaattcgtgcttatgctttgatgtaatgtttgggtatgtgaatttgatgttaattaagttcttgatgatgaatttacatgctcaagttatgtatatat 20836589  T
Q  282 gtatacttgtgtttttgctcaaaattggtggagtataatgttgttgttgatga 334  Q
    |||||||||||||||||||||||||||||| |||| ||||| |||||| ||||    
T  20836588 gtatacttgtgtttttgctcaaaattggtgaagtagaatgtggttgtttatga 20836536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 38056688 - 38056780
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttaga 93  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||| |||||    
T  38056688 ctagctttctctagtaatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttttgggaattaggtttaga 38056780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 50544908 - 50544841
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttt 68  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50544908 ctagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttt 50544841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 86 - 286
Target Start/End: Original strand, 41931146 - 41931354
Alignment:
Q  86 gggttagatttcattcataatctt--tgtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtg 183  Q
    ||||||| ||||||||||||||||  ||||||||||||||| ||| |||||  ||||| || |||| |||  ||| |||||||| ||  |||||||||||    
T  41931146 gggttagttttcattcataatcttcttgtataatctctttt-ctatttctacccataaatgcttatatgtgaaaa-tgattattatgattttaattggtg 41931243  T
Q  184 ---aaattcatgcttatgttttgatgcaatgt-----ttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgt 275  Q
       |||||| | |||||||||||||| |||||     |||| ||| ||||||||||| |||||||||||||||||||||| ||||||| ||||||||| |    
T  41931244 gtgaaattcgtacttatgttttgatgtaatgtaatgtttggatatgtgaatttgatgataattaagttgttgatgatgaaattacatgttcaagttatat 41931343  T
Q  276 ctatatgtata 286  Q
     ||||| ||||    
T  41931344 atatatatata 41931354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 24007261 - 24007330
Alignment:
Q  22 ttgtataattctgaaaaagggtttaacctt-gtagttgttgttagttttgatgttatagaaattagggtt 90  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  24007261 ttgtataattctgaaaaaaggtttaacctttgtagttgttgttagttttgatgttatagagattagggtt 24007330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 39061333 - 39061268
Alignment:
Q  25 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtt 90  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  39061333 tataattctgaaaaaaggtttaaccttgtagttgttgatagttttgatgttatagaatttagggtt 39061268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 22145686 - 22145752
Alignment:
Q  5 ctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttga 71  Q
    ||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  22145686 ctttctctaataatgggttgtttaattctgaaaaagggtttaaccttgtagttgttgttaggtttga 22145752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 8276005 - 8276097
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttaga 93  Q
    |||||||| |||||  ||| || |||||||||||||||||||||||||||||||||||||| || |||||||||| | | ||||||| |||||    
T  8276005 ctagctttatctaataatgagtggtataattctgaaaaagggtttaaccttgtagttgttgatatttttgatgttttgggaattaggtttaga 8276097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 8306642 - 8306552
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaacct--tgtagttgttgttagttttgatgttatagaaattagggtt 90  Q
    ||||||||||||||  ||||||||||||||||| |||| ||||||||| |  ||| ||| ||||||||||||||||||||||||||||||||    
T  8306642 ctagctttctctaataatgggttgtataattctaaaaaggggtttaacatgttgtcgtt-ttgttagttttgatgttatagaaattagggtt 8306552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 34392804 - 34392713
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||  ||||||||||| ||||| |||| ||||||||| | || ||||||  |||||||||||||||||||||||||||||||    
T  34392804 ctagctttctctaataatgggttgtatgattctaaaaaggggtttaacat-gttgttgttttgttagttttgatgttatagaaattagggtta 34392713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 17901810 - 17901857
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaac 48  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||    
T  17901810 ctagctttctctaataatgggttgtataattctgaaaaagggtttaac 17901857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 6834212 - 6834150
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtt 63  Q
    ||||||||||||||  ||| |||||||||||||||||||||||||||| | || |||||||||    
T  6834212 ctagctttctctaataatgagttgtataattctgaaaaagggtttaacatggttgttgttgtt 6834150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 91
Target Start/End: Complemental strand, 20588673 - 20588581
Alignment:
Q  2 tagctttctctaaagatgggttgtataattctgaaaaa--gggtttaaccttgtagttgtt--gttagttttgatgttatagaaattagggtta 91  Q
    |||||||||||||  ||||||||||| ||||| |||||  ||||||||| | ||  |||||  |||||||||||||||||||||||||||||||    
T  20588673 tagctttctctaataatgggttgtatgattctaaaaaaaagggtttaacat-gtttttgttttgttagttttgatgttatagaaattagggtta 20588581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 91
Target Start/End: Complemental strand, 20593211 - 20593119
Alignment:
Q  2 tagctttctctaaagatgggttgtataattctgaaaaa--gggtttaaccttgtagttgtt--gttagttttgatgttatagaaattagggtta 91  Q
    |||||||||||||  ||||||||||| ||||| |||||  ||||||||| | ||  |||||  |||||||||||||||||||||||||||||||    
T  20593211 tagctttctctaataatgggttgtatgattctaaaaaaaagggtttaacat-gtttttgttttgttagttttgatgttatagaaattagggtta 20593119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 40390155 - 40390096
Alignment:
Q  33 tgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||||||||||||||||  || |||||||||||| ||| ||||||||||    
T  40390155 tgaaaaagggtttaaccttgtagttgttaataggttttgatgttaaagatattagggtta 40390096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 21188073 - 21188135
Alignment:
Q  25 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 87  Q
    ||||||| ||| ||||| |||||  |||||||||||| ||||||||||||||||||| |||||    
T  21188073 tataattttgagaaaggatttaattttgtagttgttgatagttttgatgttatagaagttagg 21188135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 14294858 - 14294919
Alignment:
Q  33 tgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaattagggttaga 93  Q
    ||||||| ||||||||||||||||||| ||||| ||||| | ||| ||||||||||||||||    
T  14294858 tgaaaaatggtttaaccttgtagttgtcgttaggtttgaggattagagaaattagggttaga 14294919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 20708098 - 20708163
Alignment:
Q  25 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtt 90  Q
    |||||||||||||||||| ||||| |||  ||||||| || || |||||||| |||||||||||||    
T  20708098 tataattctgaaaaaggggttaactttgatgttgttgataattgtgatgttaaagaaattagggtt 20708163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 45499578 - 45499487
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||  ||||||||||| |||||  ||| ||||||||| | || ||||||  ||||||||| | |||||||||||||||||||    
T  45499578 ctagctttctctaataatgggttgtatgattctataaaggggtttaacat-gttgttgttttgttagttttaacgttatagaaattagggtta 45499487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 51131378 - 51131317
Alignment:
Q  33 tgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaattagggttaga 93  Q
    ||||||| ||||||||||||||||||| ||||| ||||| | ||| ||||||||||||||||    
T  51131378 tgaaaaatggtttaaccttgtagttgtcgttaggtttgaggattagagaaattagggttaga 51131317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 14792604 - 14792637
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgtt 60  Q
    |||| |||||||||||||||||||||||||||||    
T  14792604 taatcctgaaaaagggtttaaccttgtagttgtt 14792637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 21243799 - 21243832
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgtt 60  Q
    |||| |||||||||||||||||||||||||||||    
T  21243799 taatcctgaaaaagggtttaaccttgtagttgtt 21243832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 635020 - 635064
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggttt 45  Q
    ||||||||||||||  || |||||||||||||| |||||||||||    
T  635020 ctagctttctctaataataggttgtataattctaaaaaagggttt 635064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 38887128 - 38887191
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 90  Q
    |||| |||||||||||||||| ||||||||||||  || ||||||||||| ||| ||||||||||    
T  38887128 taatcctgaaaaagggtttaatcttgtagttgttaataggttttgatgttgtag-aattagggtt 38887191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 334
Target Start/End: Original strand, 3438 - 3772
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcatt 100  Q
    ||||||||||||||  ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3438 ctagctttctctaataatgcgttgtatgattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttatatttcatt 3537  T
Q  101 cataatcttt-gtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgt 199  Q
    |||||||||| ||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  3538 cataatcttttgtataatctctttttctacttctacccataagtgcttatttgtataaagtgattattgaggatttaattggtgaaattcgtgcttatgt 3637  T
Q  200 tttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgc 299  Q
    |||||||||||||||| || | ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  3638 tttgatgcaatgtttgcgtctgtgaatttgatgttaattaagttgttgaagatgaatttacatgcttaagttatgtatatatgtatacttgtgtttttgc 3737  T
Q  300 tcaaaattggtggagtataatgttgttgttgatga 334  Q
    | |||||||||| | ||||||||||||||||||||    
T  3738 ttaaaattggtgaactataatgttgttgttgatga 3772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 244; Significance: 1e-135; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 660825 - 660499
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcatt 100  Q
    ||||||||||||||  | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  660825 ctagctttctctaataaggggttgtataattctgaaaaagg-tttaaccttgtagttgttgttagttttgatgttatagaaatttgggttagatttcatt 660727  T
Q  101 cataatcttt-gtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgt 199  Q
    |||||||||| ||||||||||||||||||||||||  ||||||||  |||||||||||||||||||||||||||||||||||||| |||  |||||||||    
T  660726 cataatcttttgtataatctctttttctacttctacccataagtgcctatttgtataaagtgattattgtggatttaattggtgagatttgtgcttatgt 660627  T
Q  200 tttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgc 299  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  660626 tttgatgcaatgtttggatatgtgaatttgatgttaattaagttgttgatgatgaatttatatgctcaagttatgtatatatgtatacttgtgtttttgc 660527  T
Q  300 tcaaaattggtggagtataatgttgttg 327  Q
    ||||||||| || |||||||||||||||    
T  660526 tcaaaattgatgaagtataatgttgttg 660499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 334
Target Start/End: Original strand, 1627083 - 1627418
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaa-gggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcat 99  Q
    ||||||||||||||  ||| ||||||||||||| ||||| ||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  1627083 ctagctttctctaataatgagttgtataattctaaaaaaagggtttacccttgtatttattgttagttttgatgttatagaaattagggttagatttcat 1627182  T
Q  100 tcataatcttt-gtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatg 198  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||| ||| ||||||||||||||||||||||||||||||||||||||  ||||||||    
T  1627183 tcataatcttttgtataatctctttttctacttctacccataagtgtctatgtgtataaagtgattattgtggatttaattggtgaaatttgtgcttatg 1627282  T
Q  199 ttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttg 298  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||    
T  1627283 ttttgatgcaatgtttgggtatgtgaatttgatgttaattaagttgttgatgatgaatttatatgctcaagttatctatatatgtatacttgtgtttttg 1627382  T
Q  299 ctcaaaattggtggagtataatgttgttgttgatga 334  Q
    |||||||||| || ||||||||||||||||||||||    
T  1627383 ctcaaaattgatgaagtataatgttgttgttgatga 1627418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 23199223 - 23199549
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcatt 100  Q
    ||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  23199223 ctagctttctctaataatgggttgtataattctgaaaaatggtttaaccttgtagttgttagtagttttgatgttatagaaattagggttagatttcatt 23199322  T
Q  101 cataatcttt-gtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgt 199  Q
    |||||||||| ||||||||||||||||| ||||||  ||||||||  ||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  23199323 cataatcttttgtataatctctttttcttcttctacccataagtgcctatttgtataaagtgattattgtggatttaattggtgaaatttgtgcttatgt 23199422  T
Q  200 tttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgc 299  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||  |||||||    
T  23199423 tttgatgcaatgtttgggtatgtgaatttgatgttaattaagttgttgatgatgaatttatatgctcaagttatgtatatatgtatacttgcatttttgc 23199522  T
Q  300 tcaaaattggtggagtataatgttgtt 326  Q
    |||||||||||| ||||| ||||||||    
T  23199523 tcaaaattggtgaagtatgatgttgtt 23199549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 5 - 334
Target Start/End: Complemental strand, 18744906 - 18744583
Alignment:
Q  5 ctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcattcata 104  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18744906 ctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttattagttttgatgttatagaaattagggttagatttcattcata 18744807  T
Q  105 atcttt-gtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttg 203  Q
    |||||| ||||||||||||||||||||||||  ||||||||  ||| |||       ||||||||||||||||||||||||||||  |||||||||||||    
T  18744806 atcttttgtataatctctttttctacttctacccataagtgcctatatgt-------gattattgtggatttaattggtgaaatttgtgcttatgttttg 18744714  T
Q  204 atgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgctcaa 303  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  18744713 atgcaatgtttgggcatgtgaatttgatgttaattaagttgttgatgatgaatttatatgctcaagttatgtatatatgtatacttgtgtttttgctcaa 18744614  T
Q  304 aattggtggagtataatgttgttgttgatga 334  Q
    |||||||| ||||||||||||||||||||||    
T  18744613 aattggtgaagtataatgttgttgttgatga 18744583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 16063783 - 16063701
Alignment:
Q  5 ctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 87  Q
    ||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16063783 ctttctctaataatgggttgtataattctaaaaaagggtttaaccttgtagttgttgttagttttgatgttataggaattagg 16063701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 6551326 - 6551392
Alignment:
Q  21 gttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  6551326 gttgtataattctgaaaaagggtttaaccttgtagttgttgttagatttgatgttataggaattagg 6551392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 21504147 - 21504081
Alignment:
Q  30 ttctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagattt 96  Q
    ||||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||| ||||    
T  21504147 ttctgaaaaagggtttaagtttgtagttgttagtagttttgatgttatagaaattagggttaaattt 21504081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 32607332 - 32607423
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||  ||||||||||| ||||| |||| ||||||||| | || ||||||  |||||||||||||||||||||||||| ||||    
T  32607332 ctagctttctctaataatgggttgtatgattctaaaaaggggtttaacat-gttgttgttttgttagttttgatgttatagaaattagagtta 32607423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 21398661 - 21398752
Alignment:
Q  2 tagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttg--ttgttagttttgatgttatagaaattagggtta 91  Q
    |||||||||||||  ||||||||||| ||||| |||| ||| || | | |||  |||  |||||||||||||||||||||||||||||||||    
T  21398661 tagctttctctaataatgggttgtatgattctaaaaagggggtttaacatgtttttgttttgttagttttgatgttatagaaattagggtta 21398752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 24068234 - 24068175
Alignment:
Q  33 tgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||||||||||||||||  || |||||||||||| ||| ||||||||||    
T  24068234 tgaaaaagggtttaaccttgtagttgttaataggttttgatgttaaagagattagggtta 24068175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 21398833 - 21398904
Alignment:
Q  23 tgtataattctgaaaaa-gggtttaacctt----gtagttgttgttagttttgatgttatagaaattagggt 89  Q
    ||||||||||||||||| ||||||||||||    || |||||||||||||||||||||||||| | ||||||    
T  21398833 tgtataattctgaaaaaagggtttaacctttgttgttgttgttgttagttttgatgttatagagaatagggt 21398904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 91
Target Start/End: Complemental strand, 22111955 - 22111923
Alignment:
Q  59 ttgttagttttgatgttatagaaattagggtta 91  Q
    |||||||||||||||||||||||||||||||||    
T  22111955 ttgttagttttgatgttatagaaattagggtta 22111923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 26762413 - 26762350
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 90  Q
    |||| |||||||||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  26762413 taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 26762350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 26750044 - 26749978
Alignment:
Q  25 tataattctgaaaaagggtttaaccttgtagttgtt-gttagttttgatgttatagaaattagggtta 91  Q
    |||||| ||||||| |||||||||||||||||||||  | |||||||||||| ||| |||||||||||    
T  26750044 tataatcctgaaaaggggtttaaccttgtagttgttaataagttttgatgttgtag-aattagggtta 26749978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 1626959 - 1626992
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgtt 60  Q
    |||| |||||||||||||||||||||||||||||    
T  1626959 taatcctgaaaaagggtttaaccttgtagttgtt 1626992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 14025848 - 14025881
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgtt 60  Q
    |||| |||||||||||||||||||||||||||||    
T  14025848 taatcctgaaaaagggtttaaccttgtagttgtt 14025881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 36315366 - 36315305
Alignment:
Q  33 tgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaattagggttaga 93  Q
    ||||||| ||||||||||| ||||||| ||||| ||||| | ||| ||||||||||||||||    
T  36315366 tgaaaaatggtttaaccttatagttgtcgttaggtttgaggattagagaaattagggttaga 36315305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 8833247 - 8833310
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 90  Q
    |||| |||||||||||||||||||| ||||||||  || ||||||||||| ||| ||||||||||    
T  8833247 taatcctgaaaaagggtttaaccttatagttgttaataggttttgatgttgtag-aattagggtt 8833310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 242; Significance: 1e-134; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 21315492 - 21315820
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcatt 100  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||    
T  21315492 ctagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttattagttttgatgttatagaaattattgttagatttcatt 21315591  T
Q  101 cataatcttt-gtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgt 199  Q
    |||||||||| ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||  | |||||||    
T  21315592 cataatcttttgtataatctctttttctacttctacccataagtgtctatttgtataaagtgattattgtggatttaattggtgaaatttgtccttatgt 21315691  T
Q  200 tttgatgcaatgtttgg--gtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgttttt 297  Q
    ||||||||||||||| |  |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  21315692 tttgatgcaatgttttgaggtatgtgaatttgatgttaattaagttgttgatgatgaatttatatgctcaagttatgtatatatgtatacttgtgttttt 21315791  T
Q  298 gctcaaaattggtggagtataatgttgtt 326  Q
    |||||||||||||| ||||| ||||||||    
T  21315792 gctcaaaattggtgaagtatgatgttgtt 21315820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 3 - 326
Target Start/End: Complemental strand, 21369327 - 21369002
Alignment:
Q  3 agctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcattca 102  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||    
T  21369327 agctttctctaacaatgggttgtataattctgaaaaagggtttaaccttgtagtttatattagttttgatgttatagaaattagggttagatttcattca 21369228  T
Q  103 taatc-tttgtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttt 201  Q
    ||||| ||||||||||||||||||||||| |||  ||||| ||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  21369227 taatcttttgtataatctctttttctactactacccataaatgtctatttgtataaagtgattattgtggatttaattggtgaaatttgtgcttatgttt 21369128  T
Q  202 tgatgcaatgtttg-ggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgct 300  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  21369127 tgatgcaatgtttgaggtatgtgaatttgatgttaattaagttgttgttgatgaatttatatgctcaagttatgtatatatgtatacttgtgtttttgct 21369028  T
Q  301 caaaattggtggagtataatgttgtt 326  Q
    ||||||||||| ||||| ||||||||    
T  21369027 caaaattggtgaagtatgatgttgtt 21369002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 21335282 - 21335610
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcatt 100  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  21335282 ctagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttattagttttgatgttatagaaattatggttagatttcatt 21335381  T
Q  101 cataatc-tttgtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgt 199  Q
    ||||||| |||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||| ||||||||||||||||||  | |||||||    
T  21335382 cataatcttttgtataatctctttttctacttctacccataagtgtctatttgtataaagtgattattgtagatttaattggtgaaatttgtccttatgt 21335481  T
Q  200 tttgatgcaatgttt--gggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgttttt 297  Q
    |||||||||||||||   ||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||    
T  21335482 tttgatgcaatgttttgaggtatgtaaatttgatgttaattaagttgttgatgatgaatttatatgctcaagttatgtatatatatatacttgtgttttt 21335581  T
Q  298 gctcaaaattggtggagtataatgttgtt 326  Q
    || ||||||||||| ||||| ||||||||    
T  21335582 gcacaaaattggtgaagtatgatgttgtt 21335610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 300
Target Start/End: Complemental strand, 23610662 - 23610356
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcatt 100  Q
    ||||||||||||||  ||||||||||||||| ||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||    
T  23610662 ctagctttctctaataatgggttgtataattatgaaaaatggtttaaccttctagttgttgtttgttttgatgttatagaaattagggttagatttaatt 23610563  T
Q  101 cataatcttt-gtataa------tctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgc 193  Q
    |||||||||| ||||||      | | ||||||||||||||  ||||||||  |||||||||||||||||||||||| |||||||||||||||||  |||    
T  23610562 cataatcttttgtataaagtgattatgtttttctacttctacccataagtgcctatttgtataaagtgattattgtgaatttaattggtgaaatttttgc 23610463  T
Q  194 ttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgt 293  Q
    |||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  23610462 ttatgttttgatgcaatgtttgagtatgtgaatttaatgttaattaatttgttgatgatgaatttatatgctcaagttatgtatatatgtatacttgtgt 23610363  T
Q  294 ttttgct 300  Q
    |||||||    
T  23610362 ttttgct 23610356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 137 - 334
Target Start/End: Complemental strand, 29114662 - 29114465
Alignment:
Q  137 cataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaa 236  Q
    |||||||| ||||||||||||||||||||||  | | ||||||  ||| |||| |||||||| ||||||| ||||||||||||| |||| ||||||||||    
T  29114662 cataagtgcttatttgtataaagtgattattacgaaattaattaatgacattcgtgcttatgctttgatgtaatgtttgggtatgtgaacttgatgttaa 29114563  T
Q  237 ttaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgctcaaaattggtggagtataatgttgttgttgatga 334  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||| | ||||||||| ||||||||||    
T  29114562 ttaagttgttgatgatgaatttacatgctcaagttatgtataaatgtatacttgtgtttttactcaaaattggtgaaatataatgttattgttgatga 29114465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 159 - 330
Target Start/End: Original strand, 23165877 - 23166052
Alignment:
Q  159 gtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaattt 258  Q
    |||||||||||| |||||||||||||||||| ||||  | || ||||  ||||||||||||| |||| |||||| ||||||||||||||||| |||||||    
T  23165877 gtgattattgtgaatttaattggtgaaattcgtgctcttattgtgataaaatgtttgggtatgtgaaattgatgataattaagttgttgatgttgaattt 23165976  T
Q  259 acatgctcaag----ttatgtctatatgtatac-ttgtgtttttgctcaaaattggtggagtataatgttgttgttg 330  Q
    |||||||  ||     ||| | ||||||||||| ||||| |||||||||||||||||| | ||| || |||||||||    
T  23165977 acatgcttgagatgtatatatatatatgtatactttgtg-ttttgctcaaaattggtgaaatatgatattgttgttg 23166052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 159 - 330
Target Start/End: Original strand, 23577134 - 23577309
Alignment:
Q  159 gtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaattt 258  Q
    |||||||||||| |||||||||||||||||| ||||  | || ||||  ||||||||||||| |||| |||||| ||||||||||||||||| |||||||    
T  23577134 gtgattattgtgaatttaattggtgaaattcgtgctcttattgtgataaaatgtttgggtatgtgaaattgatgataattaagttgttgatgttgaattt 23577233  T
Q  259 acatgctcaag----ttatgtctatatgtatac-ttgtgtttttgctcaaaattggtggagtataatgttgttgttg 330  Q
    |||||||  ||     ||| | ||||||||||| ||||| |||||||||||||||||| | ||| || |||||||||    
T  23577234 acatgcttgagatgtatatatatatatgtatactttgtg-ttttgctcaaaattggtgaaatatgatattgttgttg 23577309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 28652593 - 28652662
Alignment:
Q  27 taattctgaaaaagggtttaacctt-gtagttgttgttagttttgatgttatagaaattagggttagatt 95  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  28652593 taattctgaaaaagggtttagcctttgtagttgttgttagttttgatgttatagaaattagggttagatt 28652662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 25584302 - 25584367
Alignment:
Q  25 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtt 90  Q
    ||||||||||||||||||||||||||||| |||| || ||||||||||||||||||| ||||||||    
T  25584302 tataattctgaaaaagggtttaaccttgtcgttgatgatagttttgatgttatagaagttagggtt 25584367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 19647246 - 19647180
Alignment:
Q  25 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||||||||||| ||||||||||||  ||||||||||  ||||||| |||||||||    
T  19647246 tataattctgaaaaagggtttaatcttgtagttgttaatagttttgattgtatagaagttagggtta 19647180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 28345004 - 28345092
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||  ||||| ||||| ||||| |||| ||||||||| | || ||| |||||||||| ||||||||||||||||||||||    
T  28345004 ctagctttctctaataatgggctgtatgattctaaaaaggggtttaacat-gttgtt-ttgttagtttcgatgttatagaaattagggtta 28345092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 149517 - 149610
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaa---gggtttaacct--tgtagttgttgttagttttgatgttatagaaattagggtt 90  Q
    ||||||||||||||  ||| ||||||||||||| |||||   ||||||||| |  ||| ||| ||||||||||||||||||||||||||||||||    
T  149517 ctagctttctctaataatgagttgtataattctaaaaaaaaggggtttaacatgttgtcgtt-ttgttagttttgatgttatagaaattagggtt 149610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 34491276 - 34491350
Alignment:
Q  21 gttgtataattctgaaaaagggtttaaccttgtagttgttgt----tagttttgatgttatagaaattagggtta 91  Q
    |||||||||||||||||||||||||||| | || ||||||||    |||||||||||||||| || |||||||||    
T  34491276 gttgtataattctgaaaaagggtttaacatggttgttgttgttttgtagttttgatgttataaaatttagggtta 34491350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 20006010 - 20006072
Alignment:
Q  25 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 87  Q
    |||||||||||||||||||||||  |||| ||||||  || |||||||||||||||| |||||    
T  20006010 tataattctgaaaaagggtttaattttgttgttgttaataattttgatgttatagaagttagg 20006072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 45535938 - 45535876
Alignment:
Q  25 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 87  Q
    ||||||||||||||||||||||| ||||| ||||||| || || || |||||||||| |||||    
T  45535938 tataattctgaaaaagggtttaatcttgttgttgttgataattctgttgttatagaagttagg 45535876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 91
Target Start/End: Original strand, 25584186 - 25584218
Alignment:
Q  59 ttgttagttttgatgttatagaaattagggtta 91  Q
    |||||||||||||||||||||||||||||||||    
T  25584186 ttgttagttttgatgttatagaaattagggtta 25584218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 218
Target Start/End: Original strand, 45573375 - 45573455
Alignment:
Q  137 cataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggt 218  Q
    |||||||||||||||  |||| ||||||||||||  |||||||| |||||||| ||||  | ||||||||  ||||||||||    
T  45573375 cataagtgtttatttagataa-gtgattattgtgagtttaattgttgaaattcgtgctcttattttgatgttatgtttgggt 45573455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 218
Target Start/End: Original strand, 45577042 - 45577122
Alignment:
Q  137 cataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggt 218  Q
    |||||||||||||||  |||| ||||||||||||  |||||||| |||||||| ||||  | ||||||||  ||||||||||    
T  45577042 cataagtgtttatttagataa-gtgattattgtgagtttaattgttgaaattcgtgctcttattttgatgttatgtttgggt 45577122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 218
Target Start/End: Original strand, 45580709 - 45580789
Alignment:
Q  137 cataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggt 218  Q
    |||||||||||||||  |||| ||||||||||||  |||||||| |||||||| ||||  | ||||||||  ||||||||||    
T  45580709 cataagtgtttatttagataa-gtgattattgtgagtttaattgttgaaattcgtgctcttattttgatgttatgtttgggt 45580789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 218
Target Start/End: Original strand, 45584376 - 45584456
Alignment:
Q  137 cataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggt 218  Q
    |||||||||||||||  |||| ||||||||||||  |||||||| |||||||| ||||  | ||||||||  ||||||||||    
T  45584376 cataagtgtttatttagataa-gtgattattgtgagtttaattgttgaaattcgtgctcttattttgatgttatgtttgggt 45584456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 218
Target Start/End: Original strand, 45588043 - 45588123
Alignment:
Q  137 cataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggt 218  Q
    |||||||||||||||  |||| ||||||||||||  |||||||| |||||||| ||||  | ||||||||  ||||||||||    
T  45588043 cataagtgtttatttagataa-gtgattattgtgagtttaattgttgaaattcgtgctcttattttgatgttatgtttgggt 45588123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 218
Target Start/End: Original strand, 45591710 - 45591790
Alignment:
Q  137 cataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggt 218  Q
    |||||||||||||||  |||| ||||||||||||  |||||||| |||||||| ||||  | ||||||||  ||||||||||    
T  45591710 cataagtgtttatttagataa-gtgattattgtgagtttaattgttgaaattcgtgctcttattttgatgttatgtttgggt 45591790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 218
Target Start/End: Original strand, 45595377 - 45595457
Alignment:
Q  137 cataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggt 218  Q
    |||||||||||||||  |||| ||||||||||||  |||||||| |||||||| ||||  | ||||||||  ||||||||||    
T  45595377 cataagtgtttatttagataa-gtgattattgtgagtttaattgttgaaattcgtgctcttattttgatgttatgtttgggt 45595457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 218
Target Start/End: Original strand, 45599044 - 45599124
Alignment:
Q  137 cataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggt 218  Q
    |||||||||||||||  |||| ||||||||||||  |||||||| |||||||| ||||  | ||||||||  ||||||||||    
T  45599044 cataagtgtttatttagataa-gtgattattgtgagtttaattgttgaaattcgtgctcttattttgatgttatgtttgggt 45599124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 218
Target Start/End: Original strand, 45602711 - 45602791
Alignment:
Q  137 cataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggt 218  Q
    |||||||||||||||  |||| ||||||||||||  |||||||| |||||||| ||||  | ||||||||  ||||||||||    
T  45602711 cataagtgtttatttagataa-gtgattattgtgagtttaattgttgaaattcgtgctcttattttgatgttatgtttgggt 45602791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 218
Target Start/End: Original strand, 45606378 - 45606458
Alignment:
Q  137 cataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggt 218  Q
    |||||||||||||||  |||| ||||||||||||  |||||||| |||||||| ||||  | ||||||||  ||||||||||    
T  45606378 cataagtgtttatttagataa-gtgattattgtgagtttaattgttgaaattcgtgctcttattttgatgttatgtttgggt 45606458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 218
Target Start/End: Original strand, 45610045 - 45610125
Alignment:
Q  137 cataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggt 218  Q
    |||||||||||||||  |||| ||||||||||||  |||||||| |||||||| ||||  | ||||||||  ||||||||||    
T  45610045 cataagtgtttatttagataa-gtgattattgtgagtttaattgttgaaattcgtgctcttattttgatgttatgtttgggt 45610125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 218
Target Start/End: Original strand, 45613712 - 45613792
Alignment:
Q  137 cataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggt 218  Q
    |||||||||||||||  |||| ||||||||||||  |||||||| |||||||| ||||  | ||||||||  ||||||||||    
T  45613712 cataagtgtttatttagataa-gtgattattgtgagtttaattgttgaaattcgtgctcttattttgatgttatgtttgggt 45613792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 218
Target Start/End: Original strand, 45617379 - 45617459
Alignment:
Q  137 cataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggt 218  Q
    |||||||||||||||  |||| ||||||||||||  |||||||| |||||||| ||||  | ||||||||  ||||||||||    
T  45617379 cataagtgtttatttagataa-gtgattattgtgagtttaattgttgaaattcgtgctcttattttgatgttatgtttgggt 45617459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 7 - 334
Target Start/End: Original strand, 15637 - 15965
Alignment:
Q  7 ttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcattcataat 106  Q
    ||||||||  |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15637 ttctctaataatggtttgtatgattctaaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcattcataat 15736  T
Q  107 cttt-gtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgat 205  Q
    |||| ||||||||||||||||||||||||  ||||||||  ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15737 cttttgtataatctctttttctacttctacacataagtgaatatatgtataaagtgattattgtggatttaattggtgaaattcgtgcttatgttttgat 15836  T
Q  206 gcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgctcaaaa 305  Q
    | ||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||    
T  15837 gaaatgtttgggtatgtaaatttgatgttaattatgttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttacttaaaa 15936  T
Q  306 ttggtggagtataatgttgttgttgatga 334  Q
    |||||| ||||||| ||| ||||||||||    
T  15937 ttggtgaagtataacgttattgttgatga 15965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 235; Significance: 1e-130; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 2 - 326
Target Start/End: Original strand, 20410529 - 20410852
Alignment:
Q  2 tagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcattc 101  Q
    |||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||  ||||||||||||||||||| ||||||    
T  20410529 tagctttctctaataatgggttgtataattctgaaaaaggatttaaccttgtagttgttattagttttgatg--atagaaattagggttagatctcattc 20410626  T
Q  102 ataatcttt-gtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgtt 200  Q
    ||||||||| ||||||||||||||||||||||||  ||||||||  ||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  20410627 ataatcttttgtataatctctttttctacttctacccataagtgcctatttgtataaagtgattattgtggatttaattggtgaaatttgtgcttatgtt 20410726  T
Q  201 ttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgct 300  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||| |||||||||||||||||||    
T  20410727 ttgatgcaatgtttgggtatgtgaatttgatgttaattaagttgttgatgatgaatttatatgctcgagttatgtatataagtatacttgtgtttttgct 20410826  T
Q  301 caaaattggtggagtataatgttgtt 326  Q
    ||||||||||| ||||| ||||||||    
T  20410827 caaaattggtgaagtatgatgttgtt 20410852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 21 - 119
Target Start/End: Complemental strand, 15998905 - 15998806
Alignment:
Q  21 gttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcattcataatc-tttgtataatct 119  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  15998905 gttgtataattctgaaaaagagtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcattgataatcttttgtataatct 15998806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 137 - 334
Target Start/End: Original strand, 17856412 - 17856610
Alignment:
Q  137 cataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaa 236  Q
    |||| ||| |||||| | ||||||||||||| ||  |||||||| ||||||| ||||||||  ||||||| ||||||||||||| ||||||||||||| |    
T  17856412 catacgtgcttatttttgtaaagtgattattatgattttaattgatgaaatttatgcttatactttgatgtaatgtttgggtatgtgaatttgatgttga 17856511  T
Q  237 ttaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatac-ttgtgtttttgctcaaaattggtggagtataatgttgttgttgatga 334  Q
    || |||||||||||||||| ||||||||||||| | ||| ||||||||||| ||||||||| | | ||||||| || |  || ||||||||||||||||    
T  17856512 ttgagttgttgatgatgaaattacatgctcaagatgtgtatatatgtatactttgtgttttcgtttaaaattgatgaaaaattatgttgttgttgatga 17856610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 94 - 333
Target Start/End: Complemental strand, 16386764 - 16386528
Alignment:
Q  94 tttcattcataatc-tttgtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatg 192  Q
    |||||||||||||| |||||||||||| ||||||| ||     ||| |||||||||||||   ||||||||||||||| ||||||||| |||||||| ||    
T  16386764 tttcattcataatcctttgtataatctatttttcttctcaagttcaaaagtgtttatttgggaaaagtgattattgtg-atttaattgctgaaattcgtg 16386666  T
Q  193 cttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtg 292  Q
    ||||| | |||||||||||||||||||| ||||||||||| ||||||||||||| ||| ||||  |||||||||| | | | |  | |||||||||||||    
T  16386665 cttatatgttgatgcaatgtttgggtatatgaatttgatgataattaagttgttaatgttgaa--tacatgctcatgatgtataaacatgtatacttgtg 16386568  T
Q  293 tttttgctcaaaattggtggagtataatgttgttgttgatg 333  Q
     ||| ||||||||||| || || ||||| ||||||||||||    
T  16386567 -tttcgctcaaaattgatgaagaataatattgttgttgatg 16386528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 82 - 185
Target Start/End: Original strand, 21686158 - 21686262
Alignment:
Q  82 attagggttagatttcattcataatcttt-gtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattg 180  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||  |||||||||||||||||||||||||||| |||||    
T  21686158 attagggttagatttcattcataatcttttgtataatctctttttctacttctacccataagtgcctatttgtataaagtgattattgtggattaaattg 21686257  T
Q  181 gtgaa 185  Q
    |||||    
T  21686258 gtgaa 21686262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 122 - 265
Target Start/End: Original strand, 15515249 - 15515393
Alignment:
Q  122 ttttctacttctaatcataagtgtttatttgtataaagtgatta-ttgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtat 220  Q
    |||||||||| || ||| ||||| ||||||||  ||||| |||| ||||| |||||||| ||||||||||||||  | | |||||||||||||| |||||    
T  15515249 ttttctacttatattcaaaagtggttatttgtgaaaagttattaattgtgaatttaattagtgaaattcatgctgttatgttgatgcaatgtttaggtat 15515348  T
Q  221 ttgaatttgatgttaattaagttgttgatgatgaatttacatgct 265  Q
     ||||||||| | ||||||||||||||||| ||||||||||||||    
T  15515349 gtgaatttgaggataattaagttgttgatgttgaatttacatgct 15515393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 94 - 257
Target Start/End: Original strand, 31160273 - 31160437
Alignment:
Q  94 tttcattcataatc-tttgtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatg 192  Q
    |||||||||||||| ||||||||||||||||| || ||     ||| ||||| ||||||||  |||||||||||||||  | ||||||||||||||| ||    
T  31160273 tttcattcataatcctttgtataatctcttttccttctcaagttcaaaagtgcttatttgtgaaaagtgattattgtgattataattggtgaaattcgtg 31160372  T
Q  193 cttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatt 257  Q
    ||||||||||||||||||||||  |||| ||||||||||| |||||  ||||| |||| ||||||    
T  31160373 cttatgttttgatgcaatgtttaagtatgtgaatttgatgataattgtgttgtagatgttgaatt 31160437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 21683091 - 21683171
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaa 82  Q
    ||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21683091 ctagctttctctaataatgggttgtataattcagaaaaagggtttaaccttgtagttgttg-tagttttgatgttatagaaa 21683171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 19825502 - 19825576
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgtt 75  Q
    ||||||||||||||  |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19825502 ctagctttctctaataatgggttgcataattctgaaaaaggttttaaccttgtagttgttgttagttttgatgtt 19825576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 18982592 - 18982515
Alignment:
Q  17 atgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaattagggttaga 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||| ||||||||||||||||    
T  18982592 atgggttgtataattctgaaaaagggtttaaccttgtagttgttgctaggtttgatgattagagaaattagggttaga 18982515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 1818965 - 1818899
Alignment:
Q  25 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtta 91  Q
    |||| |||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||    
T  1818965 tatagttctgaaaaagggtttaagcttgtagttgttaatagttttgatgttatagaaattagggtta 1818899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 24506155 - 24506217
Alignment:
Q  25 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 87  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||||||||||| |||||    
T  24506155 tataattctgaaaaagggtttaattttgtagttgttgatagttttgatgttatagaagttagg 24506217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 23658125 - 23658044
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaa 81  Q
    ||||||||| ||||  || |||||||||||||||||||||||||||||||||||||||||  || ||||||||||| |||||    
T  23658125 ctagctttccctaataataggttgtataattctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaa 23658044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 25601371 - 25601437
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatt 95  Q
    |||||||||||||||||||||||||   || |||||||||||| |||||||||||||||||||||||||    
T  25601371 taattctgaaaaagggtttaaccttt--gtagttgttagttttcatgttatagaaattagggttagatt 25601437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 10446253 - 10446162
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||  ||||||||||| ||||| |||| ||||||||| | || ||||||  |||||||| ||||||||||||||||||||||    
T  10446253 ctagctttctctaataatgggttgtatgattctaaaaaggggtttaacat-gttgttgttttgttagtttcgatgttatagaaattagggtta 10446162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 34140477 - 34140554
Alignment:
Q  7 ttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaatta 85  Q
    ||||||||  ||||||| ||||||| |||||   ||||||| ||||||||||||||||||||||||||||||| |||||    
T  34140477 ttctctaataatgggtt-tataattttgaaatctggtttaatcttgtagttgttgttagttttgatgttataggaatta 34140554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 18982422 - 18982362
Alignment:
Q  30 ttctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtt 90  Q
    ||||||||||||||||||  |||||||||||| ||||||||||| | ||||| ||||||||    
T  18982422 ttctgaaaaagggtttaattttgtagttgttgatagttttgatgctgtagaagttagggtt 18982362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 7217285 - 7217347
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtt 90  Q
    |||| |||||||||||||||||||||||||||||  ||| ||||||||| ||| ||||||||||    
T  7217285 taatcctgaaaaagggtttaaccttgtagttgttaataggtttgatgttgtag-aattagggtt 7217347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 29045307 - 29045260
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaac 48  Q
    ||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  29045307 ctagctttctctaataatgggttgtataattttgaaaaagggtttaac 29045260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 34153128 - 34153170
Alignment:
Q  43 tttaaccttgtagttgttgttagttttgatgttatagaaatta 85  Q
    ||||| ||||||||||||||||||||||||||||||| |||||    
T  34153128 tttaatcttgtagttgttgttagttttgatgttataggaatta 34153170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 31734718 - 31734655
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 90  Q
    |||||||||||||||||||||||||| |||||||  || ||||||||||| || |||||||||||    
T  31734718 taattctgaaaaagggtttaaccttgcagttgttaataggttttgatgttgta-aaattagggtt 31734655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 22557259 - 22557204
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaa 81  Q
    |||| |||||||||||||||||||||||||||||  || ||||||||||| |||||    
T  22557259 taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtagaa 22557204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 23431488 - 23431551
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 90  Q
    |||| ||||||||||||||||||||||||||| |  || ||||||||||| ||| ||||||||||    
T  23431488 taatcctgaaaaagggtttaaccttgtagttgctaataggttttgatgttgtag-aattagggtt 23431551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 263
Target Start/End: Original strand, 26520329 - 26520437
Alignment:
Q  156 aaagtgattattgtggattt-aattggtgaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatga 254  Q
    ||||||||||||||| |||| |||||||||||||  ||||    |||||||| || ||||  |||| ||||||||||| ||||| ||||| || || |||    
T  26520329 aaagtgattattgtgaattttaattggtgaaatttgtgctctacttttgatgtaaagtttaagtatgtgaatttgatgataattgagttgatgttgttga 26520428  T
Q  255 atttacatg 263  Q
    |||| ||||    
T  26520429 atttgcatg 26520437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 21 - 326
Target Start/End: Original strand, 17976 - 18284
Alignment:
Q  21 gttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcattcataatcttt-gtataatct 119  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||    
T  17976 gttgtataattctgaaaaaggatttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcattcataatattttgtttaatct 18075  T
Q  120 ctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggta 219  Q
    |||||| ||||||||  |||||||| ||||||||||||||||||||||||| |||||||||| ||||||  |||||||||||||||||||||||||||||    
T  18076 ctttttttacttctacccataagtgcttatttgtataaagtgattattgtgaatttaattggggaaatttgtgcttatgttttgatgcaatgtttgggta 18175  T
Q  220 tttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatg--tctatatgtatacttgtgtttttgctcaaaattggtggagtat 317  Q
    | |||||||||||||||||||||||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||||||||||||| |||||    
T  18176 tgtgaatttgatgttaattaagttgttgatgatgaatttatatgctcaagttatgtatatatatgtatacttgtgtttttgctcaaaattggtgaagtat 18275  T
Q  318 aatgttgtt 326  Q
     ||||||||    
T  18276 gatgttgtt 18284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 35 - 326
Target Start/End: Original strand, 23932 - 24224
Alignment:
Q  35 aaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcattcataatcttt-gtataatctctttttctacttct 133  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  23932 aaaaagggtttaaccttgtagttgttattagttttgatgttatagaaattagggttagatttcattcataatcttttgtataatctctttttctacttct 24031  T
Q  134 aatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgt 233  Q
    |  ||||||||  ||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||    
T  24032 acccataagtgactatatgtataaagtgattattgtggatttaattggtgaaatttgtgcttatgttttgatgcaatgtttgggtatgtgaatttgatgt 24131  T
Q  234 taattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgctcaaaattggtggagtataatgttgtt 326  Q
    |||||||||| ||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  24132 taattaagttcttgatgatgaattcatatgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattggtgaagtatgatgttgtt 24224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 21 - 326
Target Start/End: Original strand, 61884 - 62195
Alignment:
Q  21 gttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttata----gaaattagggttagatttcattcataatcttt-gtata 115  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||| || ||    
T  61884 gttgtataattctgaaaa-ggatttaaccttgtagttgttgttagttttgatgttatatatagaaattagggttagatttcattcataatcttttgttta 61982  T
Q  116 atctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttg 215  Q
    |||||||||||||||||||   ||||||| |||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||    
T  61983 atctctttttctacttctacctataagtgcttatttgtataaagtgattattgtggatttaattggggaaatttgtgcttatgttttgatgcaatgtttg 62082  T
Q  216 ggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatg--tctatatgtatacttgtgtttttgctcaaaattggtgga 313  Q
    ||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||||||||||||||||| |    
T  62083 ggtgtgtgaatttgatgttaattaagttgttgatgatgaatttatatgctcaagttatgtatatatatgtatacttgtgtttttgctcaaaattggtgaa 62182  T
Q  314 gtataatgttgtt 326  Q
    |||| ||||||||    
T  62183 gtatgatgttgtt 62195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 285
Target Start/End: Original strand, 17537 - 17822
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcatt 100  Q
    |||||||| |||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  17537 ctagctttttctaataatggattgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgctgttatagaaattagggttatatttcatt 17636  T
Q  101 cataatcttt-gtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgt 199  Q
    |||||||||| ||| |||| |||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||| |||||  |||||||||    
T  17637 cataatcttttgtacaatcactttttctacttctacccataagtgtctatttgtataaagtgattattgtggatttaattggtcaaatttgtgcttatgt 17736  T
Q  200 tttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtat 285  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  17737 tttgatgcaatgtttaggtatgtgaatttgatgttaattaagttgttgatgatgaatttatatgctcaagttatgtatatatgtat 17822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 181; Significance: 1e-97; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 11176 - 11504
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaaattagggttagatttca 98  Q
    ||||||||||||||  ||||||||||| ||||| |||| ||||||| | | || ||||||  |||||||||||||||||| |||||||||||||||||||    
T  11176 ctagctttctctaataatgggttgtatgattctaaaaaggggtttatcat-gttgttgttttgttagttttgatgttatataaattagggttagatttca 11274  T
Q  99 ttcataatcttt-gtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttat 197  Q
    |||||||||||| ||||||||||||||||| ||||||  ||||||||| ||||||||||||||||||||||||| ||||||||||||||||  |||||||    
T  11275 ttcataatcttttgtataatctctttttcttcttctacccataagtgtctatttgtataaagtgattattgtgggtttaattggtgaaatt-gtgcttat 11373  T
Q  198 gttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatg--tctatatgtatacttgtgttt 295  Q
    |||||||||||||||||  |||| |||||||||||||||||||||||||||||||||| ||| ||| ||||||||||  | ||||||||||||||| |||    
T  11374 gttttgatgcaatgtttacgtatgtgaatttgatgttaattaagttgttgatgatgaacttatatgttcaagttatgcatatatatgtatacttgtattt 11473  T
Q  296 ttgctcaaaattggtggagtataatgttgtt 326  Q
    |||||||||||||||  ||||| ||||||||    
T  11474 ttgctcaaaattggtcaagtatgatgttgtt 11504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 180; Significance: 5e-97; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 2470 - 2729
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaag--ggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttca 98  Q
    ||||||||||||||  |||||||||||||||||||||||   |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  2470 ctagctttctctaataatgggttgtataattctgaaaaaaatggtttaaccttgtagtcgttattagttttgatgttatagaaattagggttagatttca 2569  T
Q  99 ttcataatcttt-gtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttat 197  Q
    |||||||||||| ||||||||||||||||||||||||  ||||||||| ||   |||||||||||||||||||||||||||||||||||||  |||||||    
T  2570 ttcataatcttttgtataatctctttttctacttctacccataagtgtctac--gtataaagtgattattgtggatttaattggtgaaatttgtgcttat 2667  T
Q  198 gttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaattta 259  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  2668 gttttgatgcaatgtttgggtatgtgaatttgatgttaattaaattgttgatgatgaattta 2729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 149; Significance: 1e-78; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 18311 - 18123
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcatt 100  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  18311 ctagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttggttttgattttatagaaattagggttagatttcatt 18212  T
Q  101 cataatctt-tgtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaatt 188  Q
    ||||||||| |||||||||||||||||||||||||  |||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  18211 cataatcttctgtataatctctttttctacttctacccataagtgcttatttgtataaaatgattattgtggatttaattggtgaaatt 18123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 184 - 334
Target Start/End: Complemental strand, 16030 - 15880
Alignment:
Q  184 aaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgt 283  Q
    |||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16030 aaattcgtgcttatattttgatgcaatgtttgggtatgtgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtatatatgt 15931  T
Q  284 atacttgtgtttttgctcaaaattggtggagtataatgttgttgttgatga 334  Q
    |||||||||||||| |||||||||| || |||||||| |||||||||||||    
T  15930 atacttgtgtttttactcaaaattgatgaagtataatattgttgttgatga 15880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 126; Significance: 8e-65; HSPs: 2)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 184 - 329
Target Start/End: Original strand, 7522 - 7667
Alignment:
Q  184 aaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgt 283  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  7522 aaattcgtgcttatgttttgatgcaatgtttgggtatgtgaatttgatgttaattaagttgttgatgatgaatttacatgttcaagttatgtgtatatgt 7621  T
Q  284 atacttgtgtttttgctcaaaattggtggagtataatgttgttgtt 329  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  7622 atacttgtgtttttgctcaaaattggtgaagtataatgttgttgtt 7667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 21 - 188
Target Start/End: Original strand, 5341 - 5512
Alignment:
Q  21 gttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatttcattcataatc-tttgtataatct 119  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  5341 gttgtataattcttaaaaagggtttaaccttgtagttgttgttcgttttgatgttatagatattagggttagatttcattcataatcttttgtataatct 5440  T
Q  120 ctttttctacttctaatcataagtgtttatttgtataaagtg---attattgtggatttaattggtgaaatt 188  Q
    | ||||||||||| |  |||||||| ||||||||||||||||   |||||||||| ||||||||||||||||    
T  5441 ccttttctacttcaacccataagtgcttatttgtataaagtgattattattgtgggtttaattggtgaaatt 5512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 101; Significance: 6e-50; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 94 - 289
Target Start/End: Complemental strand, 11316 - 11120
Alignment:
Q  94 tttcattcataatc-tttgtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatg 192  Q
    |||||||||||||| ||||||||||||| |||| | |||  | ||| ||||| ||||||||  ||||||||||||||| |||||||||||||||||| ||    
T  11316 tttcattcataatcgtttgtataatctcctttttttcttaaattcaaaagtgcttatttgtgaaaagtgattattgtgaatttaattggtgaaattcgtg 11217  T
Q  193 cttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatactt 289  Q
    |||  ||||||||| ||||||||||||| ||||||| ||| |||||||||||||||||||||| ||||||||||||| | ||| |||||||||||||    
T  11216 cttcagttttgatgtaatgtttgggtatgtgaatttaatgataattaagttgttgatgatgaaattacatgctcaagatgtgtatatatgtatactt 11120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 156 - 334
Target Start/End: Original strand, 10939 - 11118
Alignment:
Q  156 aaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaa 255  Q
    |||||| ||||| ||  |||||||| |||||||| |||||||| ||||||| |||||||| |||| ||||||||||||| ||| ||||||||||||||||    
T  10939 aaagtggttattatgattttaattgatgaaattcgtgcttatgctttgatgtaatgtttgagtatgtgaatttgatgttgattgagttgttgatgatgaa 11038  T
Q  256 tttacatgctcaagttatgtctatatgtatac-ttgtgtttttgctcaaaattggtggagtataatgttgttgttgatga 334  Q
     ||||||||||||| | ||| ||||||||||| |||||||||  |||||||||| || | ||||||||||||||||||||    
T  11039 attacatgctcaagatgtgtatatatgtatactttgtgttttcactcaaaattgatgaaatataatgttgttgttgatga 11118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 240 - 334
Target Start/End: Complemental strand, 368 - 274
Alignment:
Q  240 agttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgctcaaaattggtggagtataatgttgttgttgatga 334  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  368 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattggtgaagtataatgttgttgttgatga 274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 421 - 361
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  421 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaacattgtagttgttg 361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 83; Significance: 4e-39; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 240 - 334
Target Start/End: Complemental strand, 10579 - 10485
Alignment:
Q  240 agttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtgtttttgctcaaaattggtggagtataatgttgttgttgatga 334  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  10579 agttgttgatgatgaatttacatgctcaagttatgtatatatgtatacttgtgtttttgctcaaaattggcgaagtataatgttgttgttgatga 10485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 10631 - 10572
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttg 61  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  10631 ctagctttctctaaagatgg-ttgtataattctgaaaaagggtttaacattgtagttgttg 10572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1278 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold1278
Description:

Target: scaffold1278; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 94 - 330
Target Start/End: Complemental strand, 1692 - 1456
Alignment:
Q  94 tttcattcataatc-tttgtataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatg 192  Q
    |||||||||||||| ||||||||||||||||| || ||     ||| ||||| |||||| |  |||||||||||||||  |||||||| |||||||| ||    
T  1692 tttcattcataatcctttgtataatctcttttccttctcaagttcaaaagtgcttattttttaaaagtgattattgtgattttaattgttgaaattcgtg 1593  T
Q  193 cttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagttatgtctatatgtatacttgtg 292  Q
    ||||||||||||||| || ||||| ||  ||||||||||| |||||||||||||| ||||||| ||||||||||||| ||| | ||||| ||||  | |     
T  1592 cttatgttttgatgccatatttggatacatgaatttgatgataattaagttgttgttgatgaaattacatgctcaagatatatatatatatatatgtata 1493  T
Q  293 tttttgctcaaaattggtggagtataatgttgttgttg 330  Q
    | ||| ||||||||||||| ||||| ||||||||||||    
T  1492 tattt-ctcaaaattggtgtagtatgatgttgttgttg 1456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 71; Significance: 5e-32; HSPs: 2)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 2917 - 2831
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 87  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  2917 ctagctttctctaataatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagtttcgatgttataggaattagg 2831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 2828 - 2762
Alignment:
Q  25 tataattctgaaaaagggtttaacct--tgtagttgttgttagttttgatgttatagaaattagggtt 90  Q
    ||||||||| |||| ||||||||| |  ||| ||| |||||| |||||||||||||||||||||||||    
T  2828 tataattctaaaaaggggtttaacatgttgtcgtt-ttgttacttttgatgttatagaaattagggtt 2762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 157 - 289
Target Start/End: Original strand, 2760 - 2892
Alignment:
Q  157 aagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaat 256  Q
    ||||||||||| || ||||||||| |||||||| |||||||| |||||||  ||||||| |||| |||||||| || |||| |||||||||||||||||     
T  2760 aagtgattattttgaatttaattgatgaaattcgtgcttatgctttgatgtgatgtttgtgtatatgaatttgttgataatcaagttgttgatgatgaaa 2859  T
Q  257 ttacatgctcaagttatgtctatatgtatactt 289  Q
    ||||||||||||  ||||| |||||||||||||    
T  2860 ttacatgctcaatatatgtttatatgtatactt 2892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 1112 - 1022
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||  |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||    
T  1112 ctagctttctctaataatggattgtataattctgaaaaagggtttaaccttgtagatgttgttagttttgatgttttagaaattatggtta 1022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1204 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold1204
Description:

Target: scaffold1204; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 157 - 289
Target Start/End: Original strand, 65 - 197
Alignment:
Q  157 aagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaat 256  Q
    ||||||||| | || ||||||||| | |||||| |||||||| |||||||  |||||||||||| |||||||| || |||| |||||||||||||||||     
T  65 aagtgattagtttgaatttaattgataaaattcgtgcttatgctttgatgtgatgtttgggtatatgaatttgttgataatcaagttgttgatgatgaaa 164  T
Q  257 ttacatgctcaagttatgtctatatgtatactt 289  Q
    ||||||||||||  ||||| |||||||||||||    
T  165 ttacatgctcaatatatgtttatatgtatactt 197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 64; Significance: 8e-28; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 26744 - 26669
Alignment:
Q  20 ggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttagatt 95  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||    
T  26744 ggttgtataattctgaaaaagggtttaactttgtagttgttgttagctttgatgttatagagattagggttagatt 26669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 23626 - 23564
Alignment:
Q  25 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 87  Q
    ||||||||| |||||||||||||  |||||||||||  ||||||||||||||||||| |||||    
T  23626 tataattctaaaaaagggtttaattttgtagttgttaatagttttgatgttatagaagttagg 23564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 93 - 268
Target Start/End: Original strand, 5718 - 5896
Alignment:
Q  93 atttcattcataatctttg---tataatctctttttctacttctaatcataagtgtttatttgtataaagtgatta-ttgtggatttaattggtgaaatt 188  Q
    ||||||||||||||||||    ||||||||||||| | |||| || ||| ||||  ||||||||  |||||||||| ||||| |||||| || |||||||    
T  5718 atttcattcataatctttaagttataatctctttt-caacttatattcaaaagtccttatttgtgaaaagtgattaattgtgaatttaaatgttgaaatt 5816  T
Q  189 catgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaa 268  Q
      ||||| |||||||||| ||||||||||||| ||| ||||||| ||||||||||||||| |||||| ||||||| ||||    
T  5817 ggtgcttgtgttttgatgtaatgtttgggtatgtgagtttgatgataattaagttgttgaagatgaaattacatgttcaa 5896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 19223 - 19154
Alignment:
Q  21 gttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtt 90  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  19223 gttgtataattctgaaaaagggtttaaccttgtagttgttattagttttgatgttatagaaataagggtt 19154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 19160 - 19115
Alignment:
Q  38 aagggtttaaccttgtagttgttgttagttttgatgttatagaaat 83  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  19160 aagggtttaaccttgtagttgttgatagttttgatgttatagaaat 19115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 62; Significance: 1e-26; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 16451 - 16528
Alignment:
Q  17 atgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaattagggttaga 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||    
T  16451 atgggttgtataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatgattagagaaattagggttaga 16528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 18721 - 18811
Alignment:
Q  5 ctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatg-ttatagaaattagggttaga 93  Q
    ||||||||||  ||| ||||||||||||| ||||| |||||| ||||||||||||||||| ||  ||||| ||| ||||||||||||||||    
T  18721 ctttctctaataatgagttgtataattcttaaaaacggtttagccttgtagttgttgttaggtcatgatgattagagaaattagggttaga 18811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 18902 - 18962
Alignment:
Q  30 ttctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtt 90  Q
    |||||||||| |||||||  |||||||||||| ||||||||||| ||||||| ||||||||    
T  18902 ttctgaaaaaaggtttaattttgtagttgttgatagttttgatgctatagaagttagggtt 18962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 16619 - 16679
Alignment:
Q  30 ttctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtt 90  Q
    ||||||||||| ||||||  || ||||||||| ||||||||||| ||||||| ||||||||    
T  16619 ttctgaaaaagagtttaattttatagttgttgatagttttgatgctatagaagttagggtt 16679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 13985 - 13893
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttaga 93  Q
    ||||||||||||||  |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| | | ||||||| |||||    
T  13985 ctagctttctctaataatgggttgtaaaattctgaaaaagggtttaaccttgaagttgttgttagttttgatgttttgggaattaggtttaga 13893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 4972 - 4878
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaacctt-gtagttgttgttagttttgatgttatagaaattagggttagatt 95  Q
    ||||||||||||||  |||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||    
T  4972 ctagctttctctaataatgg-ttgtataattctgtaaaagggtttaacctttgtagttgttgttagttttgatgttatagtgattagggttagatt 4878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 90 - 270
Target Start/End: Complemental strand, 8264 - 8084
Alignment:
Q  90 tagatttcattcataatctttg--tataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaat 187  Q
    ||||||||||||||||||||    |||||||| ||||||||||| || ||| |||||||||||||   ||||||||||||||| ||| ||||||||||||    
T  8264 tagatttcattcataatcttaagttataatct-tttttctacttatattcaaaagtgtttatttgagaaaagtgattattgtgaattcaattggtgaaat 8166  T
Q  188 tcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagt 270  Q
    || ||||  | | ||  ||| |||||| ||||| ||| ||||||| ||||||||||||| ||| ||||||| |||||||||||    
T  8165 tcgtgctcttatgttagtgctatgttt-ggtatgtgagtttgatgataattaagttgtttatgttgaatttgcatgctcaagt 8084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 14602 - 14689
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaattagg 87  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| ||||||||||    
T  14602 ctagctttctctaataatgggttgtataattctgaaaaagggtttaaatttgtagttgttgttagttttgatgattagagaaattagg 14689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 23660 - 23747
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaattagg 87  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| ||||||||||    
T  23660 ctagctttctctaataatgggttgtataattctgaaaaagggtttaaatttgtagttgttgttagttttgatgattagagaaattagg 23747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 28564 - 28493
Alignment:
Q  25 tataattctgaaaaagggtttaacctt-gtagttgttgttagttttgatgttatagaaattagggttagatt 95  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||    
T  28564 tataattctgaaaaagggtttaacctttgtagttgttgttagtttttatgttatagagattagggttagatt 28493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 2236 - 2287
Alignment:
Q  21 gttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgat 72  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2236 gttgtataattctgaaaaagggtttaaccttgtagttgttgttagttttgat 2287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 122 - 264
Target Start/End: Original strand, 7017 - 7159
Alignment:
Q  122 ttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtatt 221  Q
    ||||||||||  | ||||||||  ||| ||||  ||||||||||||||| |||||||||||| ||||| | ||  | ||||||||| |||||| ||||      
T  7017 ttttctacttaaattcataagtacttaattgtgaaaagtgattattgtgaatttaattggtgcaattcgtactcttattttgatgctatgttttggtacg 7116  T
Q  222 tgaatttgatgttaattaagttgttgatgatgaatttacatgc 264  Q
    ||||||||||| |||||||||| |||||| ||||||| |||||    
T  7117 tgaatttgatgataattaagttattgatgttgaatttgcatgc 7159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 4601 - 4543
Alignment:
Q  136 tcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgct 194  Q
    ||||||||| ||| ||||| || ||||||||| || |||||||||||||||||| ||||    
T  4601 tcataagtggttaattgtagaacgtgattattatgaatttaattggtgaaattcgtgct 4543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 59695 - 59757
Alignment:
Q  25 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 87  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||    
T  59695 tataattctgaaaaagggtttaactttgtagttgttgatagttttgatattatagaaattagg 59757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 18656 - 18749
Alignment:
Q  1 ctagctttctctaaagatgggttgta-taattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggttaga 93  Q
    ||||||||||||||  ||| |||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||| | | ||||||| |||||    
T  18656 ctagctttctctaataatgagttgtaataattttgaaaaaaggtttaaccttgtagttgttgttagttttgatgttttgggaattaggtttaga 18749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 90 - 262
Target Start/End: Complemental strand, 13488 - 13314
Alignment:
Q  90 tagatttcattcataatctttg---tataatctctttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaa 186  Q
    |||||||||||||||||||||    ||||||||||||| |||||| || ||| ||||| ||||||||| ||||| ||||||||| |||  ||||||||||    
T  13488 tagatttcattcataatctttaagttataatctctttt-ctacttatattcaaaagtgcttatttgtaaaaagttattattgtgaattccattggtgaaa 13390  T
Q  187 ttcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaattaagttgttgatgatgaatttacat 262  Q
    ||  ||||  ||||||  ||  |||||||||||| ||||||||||| |||  | ||||||| || ||| |||||||    
T  13389 tttgtgctattgttttagtgatatgtttgggtatgtgaatttgatgctaaacatgttgttgttgttgattttacat 13314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 40204 - 40268
Alignment:
Q  26 ataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtt 90  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||    
T  40204 ataattctaaaaaagggtttaaccatgtagttgttgatagttttgatgttatagaagttagggtt 40268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 23570 - 23503
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttagttt 68  Q
    ||||||||||||||  ||||||||||||| ||| |||| ||||| ||||||| |||||||||||||||    
T  23570 ctagctttctctaataatgggttgtataaatctaaaaaggggttaaaccttgcagttgttgttagttt 23503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 10983 - 10893
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||  ||||||||||| ||||| |||||||||||||| | || ||||||  |||||||||||||||||||||||||||||||    
T  10983 ctagctttctctaataatgggttgtatgattct-aaaaagggtttaacat-gttgttgttttgttagttttgatgttatagaaattagggtta 10893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 3217 - 3155
Alignment:
Q  25 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 87  Q
    ||||||| |||||||||||||||  |||||||||||| ||||||||||||||||||| |||||    
T  3217 tataattatgaaaaagggtttaattttgtagttgttgatagttttgatgttatagaagttagg 3155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 38481 - 38543
Alignment:
Q  25 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 87  Q
    |||||||||||||||||||||||  |||||||||||  ||||||||||||||||||| |||||    
T  38481 tataattctgaaaaagggtttaattttgtagttgttaatagttttgatgttatagaagttagg 38543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 121 - 271
Target Start/End: Complemental strand, 113860 - 113711
Alignment:
Q  121 tttttctacttctaatcataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtat 220  Q
    |||||||||||  | ||||||||| ||| ||||    ||| ||||||||| |||||| ||||||||||| | ||  | ||||||||  ||||||  ||||    
T  113860 tttttctacttagattcataagtgcttaattgtgaggagtaattattgtgaatttaagtggtgaaattcgttctcttattttgatgttatgtttatgtat 113761  T
Q  221 ttgaatttgatgttaattaagttgttgatgatgaatttacatgctcaagtt 271  Q
     ||||||| ||| ||||||||||||||||  ||||||||||||||||||||    
T  113760 atgaattt-atgataattaagttgttgatattgaatttacatgctcaagtt 113711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 8762 - 8853
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaacct--tgtagttgttgttagttttgatgttatagaaattagggtta 91  Q
    ||||||| ||||||  ||||||||||| ||||| |||| ||||| |||||  ||| ||| |||||||||||||||||||||||||||||||||    
T  8762 ctagcttactctaataatgggttgtatgattctaaaaaggggttgaacctattgttgtt-ttgttagttttgatgttatagaaattagggtta 8853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 5669 - 5578
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctga--aaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 90  Q
    ||||||||||||||  |||||||||||||||||||  ||||||||||||| |||||||||||  || ||||||||||| ||| ||||||||||    
T  5669 ctagctttctctaataatgggttgtataattctgaaaaaaagggtttaactttgtagttgttaataggttttgatgttgtag-aattagggtt 5578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 6468 - 6529
Alignment:
Q  35 aaaaagggtttaacctt-gtagttgttgttagttttgatgttatagaaattagggttagatt 95  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||| || ||||||    
T  6468 aaaaagggtttaacctttgtagttgttgttagttttgatgttatagagattatggctagatt 6529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 11647 - 11590
Alignment:
Q  6 tttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtt 63  Q
    |||||||||| |||||||||||||||||||||||||||||||| | || |||||||||    
T  11647 tttctctaaaaatgggttgtataattctgaaaaagggtttaacatcgttgttgttgtt 11590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 19892 - 19801
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaaattagggtta 91  Q
    |||| |||||||||  ||||||||||| ||||| |||| ||||||||| | || ||||||  |||||||||||||||||||||||||||||||    
T  19892 ctagatttctctaataatgggttgtatgattctaaaaaggggtttaacat-gttgttgttttgttagttttgatgttatagaaattagggtta 19801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 5486 - 5445
Alignment:
Q  5 ctttctctaaagatgggttgtataattctgaaaaagggttta 46  Q
    ||||||||||  ||| ||||||||||||||||||||||||||    
T  5486 ctttctctaataatgagttgtataattctgaaaaagggttta 5445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 40139 - 40052
Alignment:
Q  5 ctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaaattagggtta 91  Q
    ||||||||||  ||||||||||| ||||| |||| ||||||||| | || ||||||  |||||||||||||||||||||||||||||||    
T  40139 ctttctctaataatgggttgtatgattctaaaaaggggtttaacat-gttgttgttttgttagttttgatgttatagaaattagggtta 40052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 250
Target Start/End: Original strand, 19888 - 20001
Alignment:
Q  137 cataagtgtttatttgtataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtatttgaatttgatgttaa 236  Q
    ||||||||||||||||    |||||||||||||| | ||||||| |||||||| |||| |||||||  ||  |||||||||||| |||| |||||| |||    
T  19888 cataagtgtttatttgagataagtgattattgtgaacttaattgttgaaattcgtgctcatgttttagtgttatgtttgggtatgtgaaattgatgataa 19987  T
Q  237 ttaagttgttgatg 250  Q
    || | |||||||||    
T  19988 ttgaattgttgatg 20001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1518 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold1518
Description:

Target: scaffold1518; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 122 - 265
Target Start/End: Complemental strand, 419 - 275
Alignment:
Q  122 ttttctacttctaatcataagtgtttatttgt-ataaagtgattattgtggatttaattggtgaaattcatgcttatgttttgatgcaatgtttgggtat 220  Q
    |||||||||| || ||| ||||| |||||||| | |||||| |||||||| ||| |||||||||||||  ||||  | | ||  | | || ||||| |||    
T  419 ttttctacttttattcaaaagtgcttatttgtgaaaaagtgtttattgtgaattcaattggtgaaatttgtgctcttatgttatttctatttttggatat 320  T
Q  221 ttgaatttgatgttaattaagttgttgatgatgaatttacatgct 265  Q
     ||||||||||| |||||||||| |||||| ||||||||||||||    
T  319 gtgaatttgatgataattaagtttttgatgttgaatttacatgct 275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 2283 - 2221
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtt 63  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||| | || |||||||||    
T  2283 ctagctttctataataatgggttgtataattctgaaaaagggtttaacatagttgttgttgtt 2221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 7557 - 7615
Alignment:
Q  29 attctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 87  Q
    |||||||||||||||||||  || ||||||||| ||||||||||||||||||| |||||    
T  7557 attctgaaaaagggtttaattttatagttgttgatagttttgatgttatagaagttagg 7615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 28726 - 28660
Alignment:
Q  25 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtta 91  Q
    |||||||||||||||| |||||| ||||||||||||  |||||||  |||||||| |||||||||||    
T  28726 tataattctgaaaaagcgtttaatcttgtagttgttaatagttttattgttataggaattagggtta 28660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 17118 - 17057
Alignment:
Q  25 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 87  Q
    ||||||||| |||||||||||||| |||||||||||| ||| |||||| ||||||||||||||    
T  17118 tataattcttaaaaagggtttaactttgtagttgttgatag-tttgatattatagaaattagg 17057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 26649 - 26588
Alignment:
Q  25 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 87  Q
    ||||||||| |||||||||||||| |||||||||||| ||| |||||| ||||||||||||||    
T  26649 tataattcttaaaaagggtttaactttgtagttgttgatag-tttgatattatagaaattagg 26588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1939 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 135 - 74
Alignment:
Q  30 ttctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtta 91  Q
    |||||||||||||||| |  |||||||||||  ||||||||||||||||||| |||||||||    
T  135 ttctgaaaaagggttttaatttgtagttgttaatagttttgatgttatagaagttagggtta 74  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 1313 - 1264
Alignment:
Q  41 ggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtt 90  Q
    ||||||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  1313 ggtttaaccttatagttgttgatagttttgatgttatagaaataagggtt 1264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 6819 - 6770
Alignment:
Q  41 ggtttaaccttgtagttgttgttagttttgatgttatagaaattagggtt 90  Q
    ||||||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  6819 ggtttaaccttatagttgttgatagttttgatgttatagaaataagggtt 6770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 127359 - 127450
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgtt--gttagttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||  |||| |||||| ||||| |||| ||||||||| | || ||||||  |||||||||||||||||||| ||||||||||    
T  127359 ctagctttctctaataatggattgtatgattctaaaaaggggtttaacat-gttgttgttttgttagttttgatgttatagagattagggtta 127450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 6454 - 6395
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgtt 60  Q
    ||||||||||||||  ||| ||||| |||||||||||||||| |||| ||||||||||||    
T  6454 ctagctttctctaataatgagttgtgtaattctgaaaaagggattaatcttgtagttgtt 6395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 35; Significance: 0.0000000002; HSPs: 3)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 35202 - 35264
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtt 63  Q
    ||||||||| ||||  ||||||||||||||||| |||||||||||||| | || |||||||||    
T  35202 ctagctttccctaataatgggttgtataattctaaaaaagggtttaacatggttgttgttgtt 35264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 35507 - 35597
Alignment:
Q  7 ttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgttag-ttttgat-gttatagaaattagggttagattt 96  Q
    |||||||| |||||||| ||||||||||||| |||||||||| | || ||||||||| | ||||||| |||| |||||||||| || |||||    
T  35507 ttctctaatgatgggtt-tataattctgaaatagggtttaacatggttgttgttgtttgattttgatggttagagaaattaggttttgattt 35597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 35358 - 35413
Alignment:
Q  7 ttctctaaagatgggttgtataattctgaaaaagggtttaaccttgtagttgttgtt 63  Q
    |||||||| |||||||| ||||||||||||| |||||||||| | || |||||||||    
T  35358 ttctctaatgatgggtt-tataattctgaaatagggtttaacatggttgttgttgtt 35413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 66104 - 66150
Alignment:
Q  17 atgggttgtataattctgaaaaagggtttaaccttgtagttgttgtt 63  Q
    |||||||||||||||||||||||||||||||| | || |||||||||    
T  66104 atgggttgtataattctgaaaaagggtttaacatggttgttgttgtt 66150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 111396 - 111344
Alignment:
Q  1 ctagctttctctaaagatgggttgtataattctgaaaaagggtttaaccttgt 53  Q
    ||||||||||||||  ||||||||||| ||||| |||| ||||||||| ||||    
T  111396 ctagctttctctaataatgggttgtatgattctaaaaaggggtttaacattgt 111344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 377 - 438
Alignment:
Q  33 tgaaaaagggtttaaccttgtagttgttgttagttttgatg-ttatagaaattagggttaga 93  Q
    ||||||| ||||||||||||||||||| ||||| ||||| | ||| ||||||||||||||||    
T  377 tgaaaaatggtttaaccttgtagttgtcgttaggtttgaggattagagaaattagggttaga 438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 49741 - 49680
Alignment:
Q  26 ataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 87  Q
    ||||||||||||||||||||||  || |  |||||| ||||||||||||||||||| |||||    
T  49741 ataattctgaaaaagggtttaattttatttttgttgatagttttgatgttatagaagttagg 49680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 356 - 293
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 90  Q
    |||| |||||||||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  356 taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 174232 - 174169
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 90  Q
    |||| |||||||||||||||||||||||||||||  || ||||||||||| ||| ||||||||||    
T  174232 taatcctgaaaaagggtttaaccttgtagttgttaataggttttgatgttgtag-aattagggtt 174169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 90
Target Start/End: Complemental strand, 12464 - 12433
Alignment:
Q  59 ttgttagttttgatgttatagaaattagggtt 90  Q
    ||||||||||||||||||||||||||||||||    
T  12464 ttgttagttttgatgttatagaaattagggtt 12433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 29316 - 29257
Alignment:
Q  33 tgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||||||||||||||||  || |||||||||||| ||| |||| |||||    
T  29316 tgaaaaagggtttaaccttgtagttgttaataggttttgatgttaaagagattaaggtta 29257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1800 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 620 - 558
Alignment:
Q  25 tataattctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 87  Q
    ||||||||| ||||| |||||||  |||| ||||||| || |||||||||||||||| |||||    
T  620 tataattcttaaaaatggtttaattttgttgttgttgataattttgatgttatagaagttagg 558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 31938 - 31880
Alignment:
Q  29 attctgaaaaagggtttaaccttgtagttgttgttagttttgatgttatagaaattagg 87  Q
    |||||||||||||||||||  || ||||||||  ||||||||||||| ||||| |||||    
T  31938 attctgaaaaagggtttaattttatagttgttaatagttttgatgttgtagaagttagg 31880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 9074 - 9011
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 90  Q
    |||| |||||||||||||||| ||||||||||||  || ||||||||||| ||| ||||||||||    
T  9074 taatcctgaaaaagggtttaatcttgtagttgttaataggttttgatgttgtag-aattagggtt 9011  T

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Target: scaffold0439 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 91
Target Start/End: Complemental strand, 12288 - 12256
Alignment:
Q  59 ttgttagttttgatgttatagaaattagggtta 91  Q
    ||||||||||||||||||||||||||| |||||    
T  12288 ttgttagttttgatgttatagaaattaaggtta 12256  T

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Target: scaffold0371 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 10487 - 10550
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 90  Q
    |||| ||||||||||||||||| |||||||||||  || ||||||||||| ||| ||||||||||    
T  10487 taatcctgaaaaagggtttaacattgtagttgttaataggttttgatgttgtag-aattagggtt 10550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 8129 - 8085
Alignment:
Q  33 tgaaaaagggtttaaccttgtagttgttgtta-gttttgatgtta 76  Q
    ||||||||||||||||||||||||||||  || ||||||||||||    
T  8129 tgaaaaagggtttaaccttgtagttgttaataggttttgatgtta 8085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 62729 - 62666
Alignment:
Q  27 taattctgaaaaagggtttaaccttgtagttgttgtta-gttttgatgttatagaaattagggtt 90  Q
    |||| |||||||||||||||||||||| ||||||  || ||||||||||| ||| ||||||||||    
T  62729 taatcctgaaaaagggtttaaccttgtggttgttaataggttttgatgttgtag-aattagggtt 62666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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