View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0725_low_3 (Length: 389)

Name: NF0725_low_3
Description: NF0725
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0725_low_3
NF0725_low_3
[»] chr2 (23 HSPs)
chr2 (91-389)||(21141895-21142192)
chr2 (91-384)||(12728392-12728683)
chr2 (91-384)||(34824475-34824766)
chr2 (91-384)||(23778010-23778301)
chr2 (91-384)||(11231303-11231594)
chr2 (91-384)||(16935593-16935884)
chr2 (91-384)||(17006253-17006544)
chr2 (91-384)||(22513150-22513441)
chr2 (91-384)||(28775772-28776063)
chr2 (91-384)||(24685746-24686037)
chr2 (180-384)||(8943935-8944137)
chr2 (180-375)||(12635841-12636035)
chr2 (180-384)||(3798568-3798770)
chr2 (180-384)||(12641607-12641809)
chr2 (180-384)||(42177934-42178136)
chr2 (227-375)||(5888603-5888750)
chr2 (227-375)||(23774272-23774419)
chr2 (260-341)||(7507859-7507940)
chr2 (295-384)||(19886622-19886710)
chr2 (91-144)||(5888832-5888885)
chr2 (91-144)||(23774137-23774190)
chr2 (91-221)||(24341522-24341652)
chr2 (91-146)||(22138158-22138214)
[»] chr3 (25 HSPs)
chr3 (91-389)||(44228985-44229282)
chr3 (91-384)||(12264757-12265049)
chr3 (91-384)||(49232436-49232727)
chr3 (91-384)||(1467704-1467995)
chr3 (91-384)||(25058739-25059030)
chr3 (165-385)||(54651531-54651749)
chr3 (91-384)||(12902055-12902346)
chr3 (91-384)||(15468305-15468596)
chr3 (91-384)||(22275209-22275500)
chr3 (180-384)||(18911082-18911284)
chr3 (97-350)||(11986172-11986424)
chr3 (95-371)||(5228317-5228591)
chr3 (225-374)||(12811974-12812123)
chr3 (262-384)||(18897009-18897130)
chr3 (231-375)||(16821280-16821422)
chr3 (260-375)||(55316387-55316502)
chr3 (295-375)||(41270278-41270358)
chr3 (260-384)||(15615001-15615124)
chr3 (260-384)||(15936600-15936723)
chr3 (91-200)||(47984650-47984759)
chr3 (91-200)||(48003224-48003333)
chr3 (91-207)||(18897139-18897255)
chr3 (91-200)||(47993937-47994046)
chr3 (91-200)||(48012510-48012619)
chr3 (260-384)||(15938442-15938565)
[»] scaffold0191 (1 HSPs)
scaffold0191 (91-384)||(7421-7712)
[»] chr4 (21 HSPs)
chr4 (91-384)||(18248218-18248509)
chr4 (91-384)||(17145622-17145913)
chr4 (91-308)||(8374508-8374724)
chr4 (91-384)||(15287210-15287501)
chr4 (91-384)||(15294319-15294610)
chr4 (91-375)||(19020486-19020769)
chr4 (165-384)||(18169044-18169261)
chr4 (180-384)||(7132030-7132232)
chr4 (225-384)||(22738402-22738560)
chr4 (180-384)||(20000812-20001014)
chr4 (227-375)||(22352037-22352184)
chr4 (227-375)||(26339155-26339302)
chr4 (306-384)||(8378365-8378442)
chr4 (260-375)||(10644387-10644502)
chr4 (91-350)||(15675095-15675352)
chr4 (318-375)||(47357880-47357937)
chr4 (169-306)||(40885604-40885739)
chr4 (91-144)||(22352249-22352302)
chr4 (91-306)||(31115629-31115842)
chr4 (91-144)||(22738269-22738322)
chr4 (91-144)||(26339020-26339073)
[»] chr5 (33 HSPs)
chr5 (91-384)||(11212030-11212321)
chr5 (91-384)||(35791063-35791355)
chr5 (91-384)||(7425324-7425615)
chr5 (91-384)||(1219485-1219776)
chr5 (91-384)||(22883049-22883340)
chr5 (91-384)||(35582036-35582327)
chr5 (91-385)||(36989734-36990026)
chr5 (91-384)||(21932346-21932637)
chr5 (91-384)||(21938516-21938807)
chr5 (91-384)||(17471553-17471844)
chr5 (180-384)||(23514650-23514852)
chr5 (180-384)||(10777935-10778137)
chr5 (91-350)||(32950693-32950952)
chr5 (227-375)||(23328693-23328840)
chr5 (227-375)||(24616297-24616444)
chr5 (227-375)||(24712673-24712820)
chr5 (227-375)||(24745691-24745838)
chr5 (259-375)||(27010008-27010124)
chr5 (295-384)||(18777953-18778041)
chr5 (295-384)||(12577-12665)
chr5 (295-384)||(25426831-25426919)
chr5 (91-350)||(18531073-18531330)
chr5 (260-384)||(29188245-29188368)
chr5 (260-371)||(43443368-43443479)
chr5 (295-384)||(19500102-19500190)
chr5 (295-384)||(22366442-22366530)
chr5 (318-384)||(21073556-21073621)
chr5 (260-375)||(4199954-4200069)
chr5 (91-221)||(22053966-22054096)
chr5 (91-144)||(23328558-23328611)
chr5 (93-144)||(24616165-24616216)
chr5 (93-144)||(24712541-24712592)
chr5 (93-144)||(24745559-24745610)
[»] scaffold0066 (3 HSPs)
scaffold0066 (91-385)||(54416-54709)
scaffold0066 (136-385)||(45075-45323)
scaffold0066 (91-157)||(45011-45077)
[»] chr8 (17 HSPs)
chr8 (91-384)||(16195230-16195522)
chr8 (91-384)||(22006223-22006514)
chr8 (91-384)||(13662230-13662521)
chr8 (91-384)||(271325-271616)
chr8 (91-384)||(644304-644595)
chr8 (91-384)||(830039-830330)
chr8 (91-384)||(15319124-15319415)
chr8 (91-384)||(15499493-15499784)
chr8 (91-384)||(22088759-22089050)
chr8 (180-384)||(13720893-13721095)
chr8 (180-384)||(16873016-16873218)
chr8 (259-375)||(21844541-21844657)
chr8 (259-375)||(21851934-21852050)
chr8 (260-384)||(24549149-24549272)
chr8 (260-384)||(6774219-6774342)
chr8 (260-375)||(16674361-16674476)
chr8 (260-375)||(30120890-30121005)
[»] scaffold0012 (1 HSPs)
scaffold0012 (91-384)||(34123-34414)
[»] chr6 (27 HSPs)
chr6 (91-384)||(1556005-1556296)
chr6 (91-384)||(22225703-22225994)
chr6 (91-375)||(19610018-19610301)
chr6 (91-384)||(16376338-16376629)
chr6 (91-384)||(16383662-16383953)
chr6 (91-384)||(10488699-10488990)
chr6 (91-384)||(16556104-16556395)
chr6 (91-384)||(16632660-16632951)
chr6 (180-384)||(16231981-16232183)
chr6 (180-384)||(18086788-18086990)
chr6 (180-384)||(13620759-13620961)
chr6 (180-384)||(23977858-23978060)
chr6 (169-385)||(29665951-29666166)
chr6 (230-384)||(19299375-19299528)
chr6 (266-384)||(22251531-22251648)
chr6 (227-375)||(29869749-29869896)
chr6 (91-273)||(27740838-27741019)
chr6 (295-384)||(16825713-16825801)
chr6 (260-384)||(1650066-1650189)
chr6 (295-384)||(25175766-25175854)
chr6 (318-384)||(27653944-27654009)
chr6 (260-341)||(14626133-14626214)
chr6 (91-146)||(29665892-29665947)
chr6 (108-221)||(23153464-23153577)
chr6 (91-144)||(29869978-29870031)
chr6 (229-341)||(15862609-15862719)
chr6 (91-151)||(33314414-33314474)
[»] chr7 (26 HSPs)
chr7 (91-384)||(15760079-15760370)
chr7 (91-384)||(15950756-15951047)
chr7 (91-384)||(7822728-7823019)
chr7 (91-384)||(7830039-7830330)
chr7 (91-384)||(27101602-27101893)
chr7 (91-384)||(27108950-27109241)
chr7 (91-384)||(27176433-27176724)
chr7 (91-384)||(38783694-38783985)
chr7 (180-384)||(18979986-18980188)
chr7 (180-384)||(14250863-14251065)
chr7 (180-384)||(13758459-13758661)
chr7 (180-384)||(15927657-15927859)
chr7 (260-368)||(48622646-48622754)
chr7 (227-375)||(16418633-16418780)
chr7 (227-375)||(10000343-10000490)
chr7 (115-350)||(13321038-13321273)
chr7 (259-375)||(13572843-13572959)
chr7 (260-384)||(16478923-16479046)
chr7 (260-375)||(10989577-10989692)
chr7 (260-375)||(13910993-13911108)
chr7 (91-144)||(16418498-16418551)
chr7 (260-384)||(18253808-18253931)
chr7 (91-144)||(10000572-10000625)
chr7 (260-384)||(2437625-2437748)
chr7 (91-129)||(15852456-15852494)
chr7 (347-384)||(15862174-15862210)
[»] chr1 (17 HSPs)
chr1 (96-384)||(46523394-46523680)
chr1 (91-384)||(18059723-18060014)
chr1 (91-384)||(17004638-17004929)
chr1 (91-375)||(38055064-38055347)
chr1 (221-384)||(17148696-17148858)
chr1 (230-384)||(19962464-19962617)
chr1 (227-375)||(7640907-7641054)
chr1 (227-375)||(22035583-22035730)
chr1 (260-384)||(22227976-22228099)
chr1 (260-384)||(22232673-22232796)
chr1 (260-375)||(5072357-5072472)
chr1 (91-144)||(20254312-20254365)
chr1 (260-375)||(18601087-18601202)
chr1 (260-384)||(2116422-2116545)
chr1 (260-384)||(45051590-45051713)
chr1 (91-144)||(22035448-22035501)
chr1 (91-144)||(7641136-7641189)
[»] scaffold0467 (1 HSPs)
scaffold0467 (91-384)||(10304-10595)
[»] scaffold0383 (1 HSPs)
scaffold0383 (91-384)||(2392-2683)
[»] scaffold0023 (3 HSPs)
scaffold0023 (91-384)||(153972-154263)
scaffold0023 (318-384)||(169873-169938)
scaffold0023 (326-375)||(36327-36376)
[»] scaffold0107 (2 HSPs)
scaffold0107 (91-384)||(31309-31600)
scaffold0107 (91-375)||(39646-39929)
[»] scaffold0076 (2 HSPs)
scaffold0076 (91-384)||(39103-39394)
scaffold0076 (260-384)||(43165-43288)
[»] scaffold0761 (1 HSPs)
scaffold0761 (91-384)||(1540-1831)
[»] scaffold0213 (1 HSPs)
scaffold0213 (91-384)||(29162-29453)
[»] scaffold1500 (1 HSPs)
scaffold1500 (180-384)||(1479-1681)
[»] scaffold0084 (1 HSPs)
scaffold0084 (108-350)||(56105-56346)
[»] scaffold1666 (1 HSPs)
scaffold1666 (91-341)||(3-252)
[»] scaffold0017 (1 HSPs)
scaffold0017 (223-384)||(54006-54165)
[»] scaffold0183 (2 HSPs)
scaffold0183 (227-375)||(6733-6880)
scaffold0183 (91-144)||(6598-6651)
[»] scaffold0022 (1 HSPs)
scaffold0022 (260-375)||(5185-5300)
[»] scaffold0892 (1 HSPs)
scaffold0892 (223-384)||(3545-3704)
[»] scaffold0003 (2 HSPs)
scaffold0003 (227-375)||(7345-7492)
scaffold0003 (91-144)||(7210-7263)
[»] scaffold0369 (1 HSPs)
scaffold0369 (260-384)||(3890-4013)
[»] scaffold0155 (2 HSPs)
scaffold0155 (227-375)||(23722-23869)
scaffold0155 (91-144)||(23951-24004)
[»] scaffold0516 (1 HSPs)
scaffold0516 (326-389)||(12086-12149)
[»] scaffold0529 (1 HSPs)
scaffold0529 (170-384)||(3042-3253)
[»] scaffold0116 (1 HSPs)
scaffold0116 (259-371)||(202-314)
[»] scaffold0215 (2 HSPs)
scaffold0215 (260-375)||(9318-9433)
scaffold0215 (260-375)||(16216-16331)
[»] scaffold1711 (1 HSPs)
scaffold1711 (260-375)||(1273-1388)
[»] scaffold0025 (1 HSPs)
scaffold0025 (91-350)||(8849-9106)
[»] scaffold0420 (1 HSPs)
scaffold0420 (260-384)||(13286-13409)
[»] scaffold0026 (2 HSPs)
scaffold0026 (297-375)||(64492-64570)
scaffold0026 (260-384)||(107914-108037)
[»] scaffold0361 (1 HSPs)
scaffold0361 (192-350)||(3290-3447)
[»] scaffold0092 (1 HSPs)
scaffold0092 (318-384)||(10713-10778)
[»] scaffold0139 (2 HSPs)
scaffold0139 (318-384)||(21077-21142)
scaffold0139 (260-384)||(14023-14145)
[»] scaffold0125 (1 HSPs)
scaffold0125 (91-350)||(41648-41905)
[»] scaffold0008 (1 HSPs)
scaffold0008 (326-375)||(31644-31693)
[»] scaffold0195 (2 HSPs)
scaffold0195 (91-221)||(19206-19336)
scaffold0195 (91-221)||(21290-21420)
[»] scaffold0075 (1 HSPs)
scaffold0075 (260-341)||(34475-34556)
[»] scaffold0390 (1 HSPs)
scaffold0390 (91-146)||(16034-16090)


Alignment Details
Target: chr2 (Bit Score: 275; Significance: 1e-154; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 91 - 389
Target Start/End: Original strand, 21141895 - 21142192
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
21141895 catcatcaatccataattatgtatacccaagtcgtaattcacccacaacaacatcagttaatagcaataaccttaatggaacatgaatcacatctcattt 21141994  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
21141995 taacaacaacatatcaagattcactaattga-gtataatttcatagcttgacatttatacatactttgaaacatgtaatttcatccacaaacataccata 21142093  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaatgaaa 389  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
21142094 atcctcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaatgaaa 21142192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 91 - 384
Target Start/End: Original strand, 12728392 - 12728683
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||| |||||| ||||| | |||||||||| |  ||  |  | ||||||| ||||||||||||||||||    
12728392 catcatcaatccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataaccacatcaatggaatatgaatcacatctcattt 12728491  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     || || ||||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||    
12728492 caataaaaacatatcaaatttcatcaatt-aagaataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccata 12728590  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||    
12728591 atcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 12728683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 91 - 384
Target Start/End: Original strand, 34824475 - 34824766
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||| |||||| ||||| | |||||||||| |  ||  |  | ||||||| ||||||||||||||||||    
34824475 catcatcaatccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataaccacatcaatggaatatgaatcacatctcattt 34824574  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     || || ||||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||    
34824575 caataaaaacatatcaaatttcatcaatt-aagaataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccata 34824673  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||    
34824674 atcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 34824766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 23778301 - 23778010
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||| |||||| ||||| | |||||||||| |  || ||  | ||||||| |||||| |||||||||||    
23778301 catcatcaatccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataacaacatcaatggaatatgaattacatctcattt 23778202  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | | ||||||||  ||||  |||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
23778201 caatcaaatcatatcaaatttcatcaatt-aagtataatttcataacttaacatttatacatactttgaaacatgtaatttcatccacaaacataccata 23778103  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||| |||||||||    
23778102 atcatcaattcatgcataagaaaatagcatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaa-catgagaaa 23778010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 11231594 - 11231303
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||||| |  ||  |  ||||||||| |||||||||||||| |||    
11231594 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 11231495  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
11231494 caatcaaaacatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccata 11231396  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||    
11231395 atcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 11231303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 91 - 384
Target Start/End: Original strand, 16935593 - 16935884
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||| |||||| ||||| | ||||| |||| |  ||  |  | ||||||| ||||||||||||||||||    
16935593 catcatcaatccacaattaagtatacccaaatcatgattcactcacaatagcatcatttaacaataaccacatcaatggaatatgaatcacatctcattt 16935692  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  |||  ||||||||||||||| ||| ||||||||||||||||| |||||||||||||||  |||||||||||||||    
16935693 caatcaaaacatatcaaatttcatcaata-aagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacgcacaaacataccata 16935791  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||    
16935792 atcatcaattcatgcacaagaaaatagcatcacagcaagagcatgaatttaacaacaattgttcatcaacccattttcatacaa-catgagaaa 16935884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 91 - 384
Target Start/End: Original strand, 17006253 - 17006544
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||| |||||| ||||| | ||||| |||| |  ||  |  | ||||||| ||||||||||||||||||    
17006253 catcatcaatccacaattaagtatacccaaatcatgattcactcacaatagcatcatttaacaataaccacatcaatggaatatgaatcacatctcattt 17006352  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  |||  ||||||||||||||| ||| ||||||||||||||||| |||||||||||||||  |||||||||||||||    
17006353 caatcaaaacatatcaaatttcatcaata-aagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacgcacaaacataccata 17006451  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||    
17006452 atcatcaattcatgcacaagaaaatagcatcacagcaagagcatgaatttaacaacaattgttcatcaacccattttcatacaa-catgagaaa 17006544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 22513441 - 22513150
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||||| |  ||  |  ||||||||| |||||||||||||| |||    
22513441 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 22513342  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | | ||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
22513341 caatcaaagcatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccata 22513243  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||    
22513242 atcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 22513150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 28776063 - 28775772
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||||| |  ||  |  ||||||||| |||||||||||||| |||    
28776063 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 28775964  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | | ||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
28775963 caatcaaagcatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccata 28775865  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||    
28775864 atcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 28775772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 24686037 - 24685746
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| ||||||| || |||||||||||  |||| | |||||||||| |  ||  |  ||||||||| |||||||||||||| |||    
24686037 catcatcaatccacaattaagtatacctaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 24685938  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | |||| |||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
24685937 caatcaaaacacatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccata 24685839  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||    
24685838 atcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 24685746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 180 - 384
Target Start/End: Original strand, 8943935 - 8944137
Alignment:
180 acatctcattttaacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccaca 279  Q
    ||||||||||| ||  | ||||||||||  ||||  |||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| |||||    
8943935 acatctcatttcaatcaaaacatatcaaatttcatcaatt-aagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccaca 8944033  T
280 aacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatg 379  Q
    || ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||| ||||    
8944034 aatataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catg 8944132  T
380 agaaa 384  Q
    |||||    
8944133 agaaa 8944137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 180 - 375
Target Start/End: Complemental strand, 12636035 - 12635841
Alignment:
180 acatctcattttaacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccaca 279  Q
    ||||||||||| ||  | ||||||||||  ||||  |||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| |||||    
12636035 acatctcatttcaatcaaaacatatcaaatttcatcaatt-aagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccaca 12635937  T
280 aacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaac 375  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||| |||||||||||||    
12635936 aacataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacctattttcatacaac 12635841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 180 - 384
Target Start/End: Complemental strand, 3798770 - 3798568
Alignment:
180 acatctcattttaacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccaca 279  Q
    ||||||||||| ||| | ||||||||||  ||||  |||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| |||||    
3798770 acatctcatttcaaccaaaacatatcaaatttcatcaatt-aagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccaca 3798672  T
280 aacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatg 379  Q
    |||||||||||||| |||||||||||||||||||||| ||| ||| |||||||||||||||| |  ||||||||||||||||||||||||||||| ||||    
3798671 aacataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaa-catg 3798573  T
380 agaaa 384  Q
    |||||    
3798572 agaaa 3798568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 180 - 384
Target Start/End: Complemental strand, 12641809 - 12641607
Alignment:
180 acatctcattttaacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccaca 279  Q
    ||||||||||| ||| | ||||||||||  ||||  |||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| |||||    
12641809 acatctcatttcaaccaaaacatatcaaatttcatcaatt-aagtataatttcataacttaacatttatacatactttgaaacatgtaatttcagccaca 12641711  T
280 aacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatg 379  Q
    |||||||||||||| |||||||||||||||||||||| ||| ||| |||||||||||||||| |  ||||||||||||||||||||||||||||| ||||    
12641710 aacataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaa-catg 12641612  T
380 agaaa 384  Q
    |||||    
12641611 agaaa 12641607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 180 - 384
Target Start/End: Complemental strand, 42178136 - 42177934
Alignment:
180 acatctcattttaacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccaca 279  Q
    ||||||||||| ||  | ||||||||||  ||||  |||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| |    
42178136 acatctcatttcaatcaaaacatatcaaatttcatcaatt-aagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccaaa 42178038  T
280 aacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatg 379  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||| || ||||||||||||||||||||||||||||| ||||    
42178037 aacataccataatcatcaattcatgcacaagaaaatagcattacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catg 42177939  T
380 agaaa 384  Q
    |||||    
42177938 agaaa 42177934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 227 - 375
Target Start/End: Complemental strand, 5888750 - 5888603
Alignment:
227 aatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagc 326  Q
    ||||||| | |||||||||||||||||| || || |||||||||||||||||||||||||||||||| |||||||||| | |||  || |||| || | |    
5888750 aatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag-caacagcaacataac 5888652  T
327 aagagcacgaatttaacatcaattgttcatcaacccattttcatacaac 375  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||    
5888651 aagagcacgaatttgacatgaattgttcatcaacccattttcatacaac 5888603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 227 - 375
Target Start/End: Original strand, 23774272 - 23774419
Alignment:
227 aatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagc 326  Q
    ||||||| | |||||||||||||||||| || || |||||||||||||||||||||||||||||||| |||||||| | | ||| ||| |||| || | |    
23774272 aatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcaagtataag-aaacagcaacataac 23774370  T
327 aagagcacgaatttaacatcaattgttcatcaacccattttcatacaac 375  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||    
23774371 aagagcacgaatttgacatgaattgttcatcaacccattttcatacaac 23774419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 260 - 341
Target Start/End: Complemental strand, 7507940 - 7507859
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaattta 341  Q
    |||||||||||||| | |||| ||||| || ||| |||||||||||||||||||||||||||||| ||||||||||||||||    
7507940 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaattta 7507859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 295 - 384
Target Start/End: Complemental strand, 19886710 - 19886622
Alignment:
295 tcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    |||||||||||| |  || ||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||    
19886710 tcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaa-catgagaaa 19886622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 5888885 - 5888832
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacat 144  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
5888885 catcatcaatccataattatgtatacccaagtcataattcactcacaacaacat 5888832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 23774137 - 23774190
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacat 144  Q
    ||||||||||||||||||| |||||||||||| ||||||||| |||||||||||    
23774137 catcatcaatccataattaagtatacccaagttataattcactcacaacaacat 23774190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 221
Target Start/End: Complemental strand, 24341652 - 24341522
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    |||||||||| ||| | ||||||||||||||  || ||||| | |||  ||||||| |||| | ||||||  | ||| |||||||||||| |||||| ||    
24341652 catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaggaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaatt 24341553  T
191 taacaacaacatatcaagattcactaattga 221  Q
     ||||||||| || ||| |||||| ||||||    
24341552 caacaacaacttagcaaaattcaccaattga 24341522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 146
Target Start/End: Original strand, 22138158 - 22138214
Alignment:
91 catcatcaatccat-aattatgtatacccaagtcataattcacccacaacaacatca 146  Q
    |||||||||| ||| ||||||| ||||||||||||||| ||||| ||||||| ||||    
22138158 catcatcaattcatgaattatgaatacccaagtcataaatcaccaacaacaatatca 22138214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 271; Significance: 1e-151; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 91 - 389
Target Start/End: Original strand, 44228985 - 44229282
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
44228985 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataaccttaatggaacatgaatcacatctcattt 44229084  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
44229085 taacaacaacatatcaagattcactaattga-gtataatttcatagcttgacatttatacatactttgaaacatgtaatttcatccacaaacataccata 44229183  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaatgaaa 389  Q
    ||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
44229184 atcatcaattcatgcacaagaaaatagcatcacaacaagagcacggatttaacatcaattgttcatcaacccattttcatacaaccatgagaaatgaaa 44229282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 12265049 - 12264757
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  | ||||||||||||||||||||||||||    
12265049 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcattt 12264950  T
191 taacaacaacatatcaagatt-cactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccat 289  Q
     |||||||||||||||| ||| ||  |||| ||||||||| ||||| ||| ||||||||||||||||| ||||||||||||||| |||||||||||||||    
12264949 caacaacaacatatcaaaatttcatcaatt-aagtataatctcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccat 12264851  T
290 aatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||    
12264850 aatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 12264757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 91 - 384
Target Start/End: Original strand, 49232436 - 49232727
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||||| |  ||  |  | ||||||| ||||||||||||||||||    
49232436 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacatcaatggaatatgaatcacatctcattt 49232535  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||    
49232536 caatcaaaacatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccata 49232634  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||    
49232635 atcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 49232727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 1467995 - 1467704
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||||| |  ||  |  ||||||||| |||||||||||||| |||    
1467995 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 1467896  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
1467895 caatcaaaacatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccata 1467797  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||    
1467796 atcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 1467704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 91 - 384
Target Start/End: Original strand, 25058739 - 25059030
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    |||||||||| || ||||| |||||| ||| |||| |||||| ||||| | ||| |||||| |  || ||  | ||||||| |||||| |||||||||||    
25058739 catcatcaattcacaattaagtatactcaaatcatgattcactcacaatagcataagttaacaataacaacatcaatggaatatgaattacatctcattt 25058838  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||    
25058839 caatcaaaacatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccata 25058937  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||    
25058938 atcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 25059030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 165 - 385
Target Start/End: Original strand, 54651531 - 54651749
Alignment:
165 aatggaacatgaatcacatctcattttaacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacat 264  Q
    |||||||||||||| ||||||||||| |||||||||||||||| |||||| |||||| ||||||||||||| ||| |||||||||||||||||  |||||    
54651531 aatggaacatgaattacatctcatttcaacaacaacatatcaaaattcaccaattga-gtataatttcataacttaacatttatacatactttgcaacat 54651629  T
265 gtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccat 364  Q
    | |||||||  ||||| ||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||    
54651630 gcaatttcactcacaatcatacaattatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattattcatcaacccat 54651729  T
365 tttcatacaaccatgagaaat 385  Q
    |||||||||| ||||||||||    
54651730 tttcatacaa-catgagaaat 54651749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 12902346 - 12902055
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    |||||| |||||| ||||| ||||| |||| |||| |||||| ||||| |  |||||||||||  || ||  | ||||||| |||||| |||||||||||    
12902346 catcattaatccacaattaagtatatccaaatcatgattcactcacaatagtatcagttaataataacaacatcaatggaatatgaattacatctcattt 12902247  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  || |  |||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||    
12902246 caatcaaaacatatcaaatttaatcaatt-aagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccata 12902148  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||||||||||||||||| |||||||||||||||||||||||| ||  |||| ||||||||||||||||||||||| |||||||||    
12902147 atcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaaaaattattcatcaacccattttcatacaa-catgagaaa 12902055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 15468596 - 15468305
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    |||||||||| ||| | |||| |||||||||  || |||||  ||||| |||||||||||| |  || ||  | ||||||| |||||| |||||||||||    
15468596 catcatcaattcatgaatatgcatacccaagcaatgattcattcacaataacatcagttaacaataacaacatcaatggaatatgaattacatctcattt 15468497  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  |||| ||||||||||||||  ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||    
15468496 caatcaaaacatatcaaatttcatcaatt-aagtataatttcatgacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccata 15468398  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||| ||||||||||||||||||| |||||||||    
15468397 atcatcaattcatgcacaagaaaatagcatcatagcaagagcacgaatttagcaacaattgttcctcaacccattttcatacaa-catgagaaa 15468305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 91 - 384
Target Start/End: Original strand, 22275209 - 22275500
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    |||||||||| ||| | |||| ||||| |||  || |||||  ||||| |||||||||||| |  || ||  | ||||||| |||||| |||||||||||    
22275209 catcatcaattcatgaatatgcatacctaagcaatgattcattcacaataacatcagttaacaataacaacatcaatggaatatgaattacatctcattt 22275308  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  |||| ||||||||||||||  ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||    
22275309 caatcaaaacatatcaaatttcatcaatt-aagtataatttcatgacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccata 22275407  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| ||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||    
22275408 atcatcaattcatgcacaagaaaatggcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 22275500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 180 - 384
Target Start/End: Original strand, 18911082 - 18911284
Alignment:
180 acatctcattttaacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccaca 279  Q
    ||||||||||| ||  | ||||||||||  ||||  |||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| |||||    
18911082 acatctcatttcaatcaaaacatatcaaatttcatcaatt-aagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccaca 18911180  T
280 aacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatg 379  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||| ||||    
18911181 aacataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catg 18911279  T
380 agaaa 384  Q
    |||||    
18911280 agaaa 18911284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 97 - 350
Target Start/End: Complemental strand, 11986424 - 11986172
Alignment:
97 caatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattttaacaa 196  Q
    |||||||| | |||| ||||||||||||| ||||||||||||||||||||||||||||||  ||  | ||||||||||||||||||| || ||| |||||    
11986424 caatccatgaatatgcatacccaagtcatgattcacccacaacaacatcagttaatagcatcaacatcaatggaacatgaatcacatatcttttcaacaa 11986325  T
197 caacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcctc 296  Q
    |||| || ||| |||||||| |||| | | ||||||||| ||||||||| ||||||||||||||||||||||||||| |||||| ||||| || ||| |     
11986324 caacttagcaaaattcactatttga-gcacaatttcataacttgacattaatacatactttaaaacatgtaatttcaaccacaatcatacaattatcatt 11986226  T
297 aattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaatt 350  Q
    || ||||||||| ||||||| ||||||||  ||||||||||||||||| |||||    
11986225 aaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaatt 11986172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 95 - 371
Target Start/End: Original strand, 5228317 - 5228591
Alignment:
95 atcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattttaac 194  Q
    |||||| || ||||| |||||||||| |||| |||||| ||||| | |||||||||| |  || ||  | ||||||| |||||| ||| ||||||| ||     
5228317 atcaattcacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataacaacatcaatggaatatgaattacacctcatttcaat 5228416  T
195 aacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcc 294  Q
     | ||||||||||  ||||  |||| ||||||||| ||||| ||| ||||||||||||| ||| ||||||||||||||| |||||||||||||||||||     
5228417 caaaacatatcaaatttcatcaatt-aagtataatctcataacttaacatttatacatattttgaaacatgtaatttcacccacaaacataccataatca 5228515  T
295 tcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcata 371  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||| || ||| ||||||||||||||||||||||    
5228516 tcaattcatgcacaaggaaataacatcacagcaagagcacgaatttagcaacaa-tgttcatcaacccattttcata 5228591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 225 - 374
Target Start/End: Original strand, 12811974 - 12812123
Alignment:
225 ataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcaca 324  Q
    |||| |||||| ||| ||||||||||||||||| |||||||||||| || ||| ||||||||||||||| |||||||| ||||||||||||||||| |||    
12811974 ataaattcataacttaacatttatacatactttgaaacatgtaattccacccataaacataccataatcatcaattcaagcacaagaaaatagcattaca 12812073  T
325 gcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaa 374  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||    
12812074 gcaagagcacgaatttaacaacaattgtccatcaacccattttcatacaa 12812123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 262 - 384
Target Start/End: Complemental strand, 18897130 - 18897009
Alignment:
262 catgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacc 361  Q
    ||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
18897130 catgtaattccacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttatcaacaattgttcatcaacc 18897031  T
362 cattttcatacaaccatgagaaa 384  Q
    ||||||||||||| |||||||||    
18897030 cattttcatacaa-catgagaaa 18897009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 231 - 375
Target Start/End: Original strand, 16821280 - 16821422
Alignment:
231 tcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaaga 330  Q
    ||||||||| |||||| |||||| || ||  |||||||||||| | |||| ||||| || ||| |||||| ||||| |  || ||| |||||||||||||    
16821280 tcatagcttaacatttttacatatttgaa--catgtaatttcaccaacaatcatacaattatcatcaatttatgcatacaaacataacatcacagcaaga 16821377  T
331 gcacgaatttaacatcaattgttcatcaacccattttcatacaac 375  Q
    ||||| |||| |||| |||||||||||||||||||||||||||||    
16821378 gcacggatttgacataaattgttcatcaacccattttcatacaac 16821422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 375
Target Start/End: Original strand, 55316387 - 55316502
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    |||||||||||||| | |||| ||||| |  | | |||||||||||| |  || ||| |||||||||||||||||||||||| ||| |||||||||||||    
55316387 aacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaa 55316486  T
360 cccattttcatacaac 375  Q
    ||||||||||||||||    
55316487 cccattttcatacaac 55316502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 295 - 375
Target Start/End: Original strand, 41270278 - 41270358
Alignment:
295 tcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaac 375  Q
    |||||||||||| |  || ||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
41270278 tcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaac 41270358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 384
Target Start/End: Original strand, 15615001 - 15615124
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    |||||||||||||| | |||| | ||| || ||| |||||||||||| |  || ||| || ||||| |||||||| ||| || ||| |||||||||||||    
15615001 aacatgtaatttcaccaacaatcctacaattatcatcaattcatgcatacaaatataacaccacagtaagagcacaaatctagcatgaattgttcatcaa 15615100  T
360 cccattttcatacaaccatgagaaa 384  Q
    ||||||||||||||| |||||||||    
15615101 cccattttcatacaa-catgagaaa 15615124  T

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Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 384
Target Start/End: Complemental strand, 15936723 - 15936600
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    |||||||||||||| | |||| ||||| || ||| |||||||||||| |  || ||| ||| ||||   |||||||||||||  | ||||||||||||||    
15936723 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaattgttcatcaa 15936624  T
360 cccattttcatacaaccatgagaaa 384  Q
    ||||||||||||||| |||||||||    
15936623 cccattttcatacaa-catgagaaa 15936600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 47984650 - 47984759
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    |||||||||| ||| | |||| ||||||||||||| ||||| | |||||||||||| |||| | ||| ||  | ||| ||||||||||||||||||| |     
47984650 catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc 47984749  T
191 taacaacaac 200  Q
     |||||||||    
47984750 caacaacaac 47984759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 48003224 - 48003333
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    |||||||||| ||| | |||| ||||||||||||| ||||| | |||||||||||| |||| | ||| ||  | ||| ||||||||||||||||||| |     
48003224 catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc 48003323  T
191 taacaacaac 200  Q
     |||||||||    
48003324 caacaacaac 48003333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 91 - 207
Target Start/End: Complemental strand, 18897255 - 18897139
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||| |||||| ||||| | |||||||||| |  || ||  | ||||||| |||||| |||||||||||    
18897255 catcatcaatccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataacaacatcaatggaatatgaattacatctcattt 18897156  T
191 taacaacaacatatcaa 207  Q
     ||  | ||||||||||    
18897155 caatcaaaacatatcaa 18897139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 47993937 - 47994046
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    |||||||||| ||| | |||| ||||||||||||| ||||| | ||||||| |||| |||| | ||| ||  | ||| ||||||||||||||||||| |     
47993937 catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc 47994036  T
191 taacaacaac 200  Q
     |||||||||    
47994037 caacaacaac 47994046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 48012510 - 48012619
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    |||||||||| ||| | |||| ||||||||||||| ||||| | ||||||| |||| |||| | ||| ||  | ||| ||||||||||||||||||| |     
48012510 catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc 48012609  T
191 taacaacaac 200  Q
     |||||||||    
48012610 caacaacaac 48012619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 384
Target Start/End: Complemental strand, 15938565 - 15938442
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    |||||||||||||| | |||| ||||| || ||| ||||||||||   |  || ||| ||| ||||   ||||||| |||||  | ||||||||||||||    
15938565 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgattacaaacatatcattacagttggagcacgtatttagtaacaattgttcatcaa 15938466  T
360 cccattttcatacaaccatgagaaa 384  Q
    ||||||||||||||| |||||||||    
15938465 cccattttcatacaa-catgagaaa 15938442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 238; Significance: 1e-131; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 7712 - 7421
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
7712 catcatcaatccataattatgtatacccaagtcataattcactcacaacaacatcagttaataacaataaccttaatggaacatgaatcacatctcattt 7613  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
7612 taacaacaacatatcaagattcactaattga-gtataatttcatagcttgacatttatacatactttgaaacatgtaatttcatccacaaacataccata 7514  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||||||||||||||||||||||||| ||||||||||||||||  |  |||||||||||||||||||||||||||| |||||||||    
7513 atcttcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagtaataattgttcatcaacccattttcatacaa-catgagaaa 7421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 230; Significance: 1e-127; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 91 - 384
Target Start/End: Original strand, 18248218 - 18248509
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||  | ||||||||||||||||||||||||||    
18248218 catcatcaatcgataattatgtataccaaagtcataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcattt 18248317  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||||||||||||| || ||||||||||||| ||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
18248318 caacaacaacatattaaaattcactaattga-gtataatttcatatcttaacatttatacatactttgaaacatgtaatttcatccacaaacataccata 18248416  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
18248417 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaa-catgagaaa 18248509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 17145913 - 17145622
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  | ||||||||||||||||||||||||||    
17145913 catcatcaatccgtaattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcattt 17145814  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     |||||||||||||||| ||||||||||||| ||||||||||| | ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||    
17145813 caacaacaacatatcaaaattcactaattga-gtataatttcacaacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccata 17145715  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
17145714 atcatcaattcatgtacaagaaaatagcatcacagtaagagcacgaatttaacatcaattgttcatcaactcattttcatacaa-catgagaaa 17145622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 91 - 308
Target Start/End: Original strand, 8374508 - 8374724
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||  | ||||||||||||||||||||||||||    
8374508 catcatcaatcgataattatgtatacccaagccataattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcattt 8374607  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||||||||||||| || |||||||||||| |||||||||||||| ||| ||||||||||||||||| || |||||||||||| ||||||||||||||||    
8374608 caacaacaacatattaaaattcactaattg-agtataatttcataacttaacatttatacatactttgaagcatgtaatttcacccacaaacataccata 8374706  T
291 atcctcaattcatgcaca 308  Q
    ||| ||||||||||||||    
8374707 atcatcaattcatgcaca 8374724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 15287501 - 15287210
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||||||||| ||||||||||||||| |||||| ||||||| |||||||||| |  || ||  | ||||||| |||||| |||||||||||    
15287501 catcatcaatccataattaagtatacccaagtcatgattcactcacaacagcatcagttaacaataacaacatcaatggaatatgaattacatctcattt 15287402  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  ||| || ||||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||    
15287401 caatcaaaacatatcaaatttcatcaatgga-gtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccata 15287303  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    | | || |||||||||||||||||||||||||||||||||||||||||||| |   |||||||||||| ||||||||||||||| |||||||||    
15287302 accatcgattcatgcacaagaaaatagcatcacagcaagagcacgaatttagctataattgttcatcatcccattttcatacaa-catgagaaa 15287210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 15294610 - 15294319
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||||||||| ||||||||||||||| |||||| ||||||| |||||||||| |  || ||  | ||||||| |||||| |||||||||||    
15294610 catcatcaatccataattaagtatacccaagtcatgattcactcacaacagcatcagttaacaataacaacatcaatggaatatgaattacatctcattt 15294511  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  ||| || ||||||||||||| ||| ||||||||| ||||||| ||||||||||||||| ||||||||||||||||    
15294510 caatcaaaacatatcaaatttcatcaatgga-gtataatttcataacttaacatttatatatactttgaaacatgtaatttcacccacaaacataccata 15294412  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    | | || |||||||||||||||||||||||||||||||||||||||||||| |   |||||||||||| ||||||||||||||| |||||||||    
15294411 accatcgattcatgcacaagaaaatagcatcacagcaagagcacgaatttagctataattgttcatcatcccattttcatacaa-catgagaaa 15294319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 91 - 375
Target Start/End: Original strand, 19020486 - 19020769
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||| ||| |||| |||||| ||||| | |||||||||| |  || ||  | ||||||| |||||| |||||||||||    
19020486 catcatcaatccacaattaagtatactcaaatcatgattcactcacaatagcatcagttaacaataacaacatcaatggaatatgaattacatctcattt 19020585  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||   ||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||    
19020586 caatcaaaacatatcaaatttcatccatt-aaggataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccata 19020684  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaac 375  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||    
19020685 atcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaac 19020769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 165 - 384
Target Start/End: Original strand, 18169044 - 18169261
Alignment:
165 aatggaacatgaatcacatctcattttaacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacat 264  Q
    ||||||| |||||||||||||||||| ||  | ||||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||    
18169044 aatggaatatgaatcacatctcatttcaatcaaaacatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacat 18169142  T
265 gtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccat 364  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
18169143 gtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccat 18169242  T
365 tttcatacaaccatgagaaa 384  Q
    |||||||||| |||||||||    
18169243 tttcatacaa-catgagaaa 18169261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 180 - 384
Target Start/End: Complemental strand, 7132232 - 7132030
Alignment:
180 acatctcattttaacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccaca 279  Q
    ||||||||||| ||  | ||||||||||  ||||  |||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| |||||    
7132232 acatctcatttcaatcaaaacatatcaaatttcatcaatt-aagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccaca 7132134  T
280 aacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatg 379  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||| || ||||    
7132133 aacataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatataa-catg 7132035  T
380 agaaa 384  Q
    |||||    
7132034 agaaa 7132030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 225 - 384
Target Start/End: Original strand, 22738402 - 22738560
Alignment:
225 ataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcaca 324  Q
    ||||||||| | ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
22738402 ataatttcacaacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatagcatcaca 22738501  T
325 gcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    |||||| ||||||||||||||||||||||| ||| ||||||||||||||| |||||||||    
22738502 gcaagaacacgaatttaacatcaattgttcctcagcccattttcatacaa-catgagaaa 22738560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 180 - 384
Target Start/End: Original strand, 20000812 - 20001014
Alignment:
180 acatctcattttaacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccaca 279  Q
    ||||||||||| ||| | ||||||||||  ||||  |||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| |    
20000812 acatctcatttcaaccaaaacatatcaaatttcatcaatt-aagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccaga 20000910  T
280 aacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatg 379  Q
    |||||||||||||| |||||||||||||||||||||| ||| ||| |||||||||||||||| |  ||||||||||||||||||||||||||||| ||||    
20000911 aacataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaa-catg 20001009  T
380 agaaa 384  Q
    |||||    
20001010 agaaa 20001014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 227 - 375
Target Start/End: Complemental strand, 22352184 - 22352037
Alignment:
227 aatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagc 326  Q
    ||||||| | |||||||||||||||||| || || |||||||||||||||||||||||||||||||| |||||||||| | ||| ||| |||| || | |    
22352184 aatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag-aaacagcaacataac 22352086  T
327 aagagcacgaatttaacatcaattgttcatcaacccattttcatacaac 375  Q
    ||||||| |||||| |||| |||||||||||||||||||||||||||||    
22352085 aagagcatgaatttgacatgaattgttcatcaacccattttcatacaac 22352037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 227 - 375
Target Start/End: Original strand, 26339155 - 26339302
Alignment:
227 aatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagc 326  Q
    ||||||| | |||||||||||||||||  || || |||||||||||||||||||||||||||||||| |||||||| | | ||| ||| |||| || | |    
26339155 aatttcacaacttgacatttatacatagattgaaccatgtaatttcatccacaaacataccataatcatcaattcaagtataag-aaacagcaacataac 26339253  T
327 aagagcacgaatttaacatcaattgttcatcaacccattttcatacaac 375  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||    
26339254 aagagcacgaatttgacatgaattgttcatcaacccattttcatacaac 26339302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 306 - 384
Target Start/End: Original strand, 8378365 - 8378442
Alignment:
306 acaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||    
8378365 acaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 8378442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 375
Target Start/End: Original strand, 10644387 - 10644502
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    ||||||||||||||   |||| ||||| || ||| |||||||||||| |  || ||| ||||||||||||||||||||||| |||| |||||||||||||    
10644387 aacatgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaa 10644486  T
360 cccattttcatacaac 375  Q
    ||||||||||||||||    
10644487 cccattttcatacaac 10644502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 91 - 350
Target Start/End: Complemental strand, 15675352 - 15675095
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    |||||||||| ||| | ||||||||||||||  || ||||| | |||||||||||| |||| | ||||||  | ||| |||||||||||| |||||| ||    
15675352 catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaatt 15675253  T
191 taacaacaacatatcaagattcactaattgaagtataa-tttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccat 289  Q
     ||||||||| || ||| |||||| ||||| || | || ||||| | ||| |||||| |||||| ||   |||||||||||||| | |||| ||||| ||    
15675252 caacaacaacttagcaaaattcaccaattg-agcacaattttcacaacttcacatttttacataatt--gaacatgtaatttcaccaacaatcatacaat 15675156  T
290 aatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaatt 350  Q
     ||| |||||||||||| |  || ||| ||||||||   ||||||||||||| || |||||    
15675155 tatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaatt 15675095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 375
Target Start/End: Original strand, 47357880 - 47357937
Alignment:
318 catcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaac 375  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
47357880 catcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaac 47357937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 169 - 306
Target Start/End: Complemental strand, 40885739 - 40885604
Alignment:
169 gaacatgaatcacatctcattttaacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaa 268  Q
    |||||||||||| |||||| || ||||| ||| || |||  ||||| |||||| | ||||||||||| |||||||||||||||||||||  |||||||||    
40885739 gaacatgaatcatatctcaattcaacaataacttagcaaagttcaccaattga-gcataatttcataacttgacatttatacatacttt-gaacatgtaa 40885642  T
269 tttcatccacaaacataccataatcctcaattcatgca 306  Q
    ||||| | |||||||| | || |||  |||||||||||    
40885641 tttcaccaacaaacattcaattatcaccaattcatgca 40885604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 22352302 - 22352249
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacat 144  Q
    ||||||||||||||||||| |||||||||||| ||||||||| |||||||||||    
22352302 catcatcaatccataattaagtatacccaagttataattcactcacaacaacat 22352249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 91 - 306
Target Start/End: Original strand, 31115629 - 31115842
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    |||||||||| ||| | ||||||||||||||  || ||||| | |||||||||||| |||| | ||||||  | ||| |||||||||||| |||||| ||    
31115629 catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaatt 31115728  T
191 taacaacaacatatcaagattcactaattgaagtataa-tttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccat 289  Q
     ||||||||| ||  || |||||| ||||| || |||| ||||| | ||| |||||| ||||||   |  |||||||||||||| | |||| ||||| ||    
31115729 caacaacaacttaggaaaattcaccaattg-agcataattttcacaacttcacatttttacata--atggaacatgtaatttcaccaacaatcatacaat 31115825  T
290 aatcctcaattcatgca 306  Q
     ||| ||||||||||||    
31115826 tatcatcaattcatgca 31115842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 22738269 - 22738322
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacat 144  Q
    |||||| |||||| ||||| |||||||||||||||||||||||| |||||||||    
22738269 catcattaatccacaattaagtatacccaagtcataattcaccctcaacaacat 22738322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 26339020 - 26339073
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacat 144  Q
    |||||| |||||||||||| |||||||||||| ||||||||| |||||||||||    
26339020 catcattaatccataattaagtatacccaagttataattcactcacaacaacat 26339073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 206; Significance: 1e-112; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 11212321 - 11212030
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||  | ||||||||||||||||||||||||||    
11212321 catcatcaatccataattatgtatacccaagtcataatccacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcattt 11212222  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||||||||||||| || |||||||| |||| ||||||||||||| ||| ||||||||||| ||||| ||||||||||||||| ||||||||||||||||    
11212221 caacaacaacatattaaaattcactacttga-gtataatttcataacttaacatttatacacactttgaaacatgtaatttcacccacaaacataccata 11212123  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||| |||||||||    
11212122 atcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaa-catgagaaa 11212030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 35791355 - 35791063
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||  | ||||||||||||||||||||||||||    
35791355 catcatcaatccataattatgtatacccaagtcataattcaccctcaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcattt 35791256  T
191 taacaacaacatatcaagatt-cactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccat 289  Q
     |||||||||||||||| ||| ||  |||| ||||||||| ||||| ||| ||||||||||||||||| |||||||||||||||  ||||||||||||||    
35791255 caacaacaacatatcaaaatttcatcaatt-aagtataatctcataacttaacatttatacatactttgaaacatgtaatttcactcacaaacataccat 35791157  T
290 aatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||    
35791156 aatcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 35791063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 91 - 384
Target Start/End: Original strand, 7425324 - 7425615
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||||||||| ||||| ||||||||| |||||| ||||||| |||||||||| |  || ||  | ||||||| |||||| |||||||||||    
7425324 catcatcaatccataattaagtatatccaagtcatgattcactcacaacagcatcagttaacaataacaacatcaatggaatatgaattacatctcattt 7425423  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  ||| |||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||    
7425424 caatcaaaacatatcaaatttcatcaat-gaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccata 7425522  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    | | || ||||||||||||||||||| |||||||||||||||||||||||| ||  |||||||||||||||||||||||||||| |||||||||    
7425523 accatcgattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaataattgttcatcaacccattttcatacaa-catgagaaa 7425615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 1219776 - 1219485
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||| |||||| ||||| | |||||||||| |  ||  |  | |||| || ||||||||||||||||||    
1219776 catcatcaatccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataaccacatcaatgaaatatgaatcacatctcattt 1219677  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||    
1219676 caatcaaaacatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccata 1219578  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||    
1219577 atcatcaattaatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 1219485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 22883340 - 22883049
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||||| |  ||  |  ||||||||| |||||||||||||| |||    
22883340 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 22883241  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||    
22883240 caatcaaaacatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcatccataaacataccata 22883142  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||| |||||||||    
22883141 atcatcaattcaagcacaagaaaatagcatcacagcaagagcacaaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 22883049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 91 - 384
Target Start/End: Original strand, 35582036 - 35582327
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||||| |  ||  |  ||||||||| |||||||||||||| |||    
35582036 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 35582135  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | | ||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
35582136 caatcaaagcatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccata 35582234  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||    
35582235 atcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 35582327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 91 - 385
Target Start/End: Complemental strand, 36990026 - 36989734
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||||| |  ||  |  ||||||||| |||||||||||||| |||    
36990026 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 36989927  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | | ||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
36989926 caatcaaagcatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccata 36989828  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaat 385  Q
    ||| |||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||    
36989827 atcatcaattcaagcacaagaaaatagcatcacagctagagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaat 36989734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 21932637 - 21932346
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  ||||   |||||||||| |  ||  |  ||||||||| |||||||||||||| |||    
21932637 catcatcaatccacaattaagtatacccaaatcataattcacttacaatggcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 21932538  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | | ||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
21932537 caatcaaagcatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccata 21932439  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||    
21932438 atcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 21932346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 21938807 - 21938516
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  ||||   |||||||||| |  ||  |  ||||||||| |||||||||||||| |||    
21938807 catcatcaatccacaattaagtatacccaaatcataattcacttacaatggcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 21938708  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | | ||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
21938707 caatcaaagcatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccata 21938609  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||    
21938608 atcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 21938516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 17471844 - 17471553
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    |||||||||| ||| | ||||  ||||||||  || |||||  ||||| |||||||||||| |  || ||  | ||||||| |||||| |||||| ||||    
17471844 catcatcaattcatgaatatgcgtacccaagcaatgattcattcacaataacatcagttaacaataacaacatcaatggaatatgaattacatcttattt 17471745  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  |||| ||||||||||||||  ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||    
17471744 caatcaaaacatatcaaatttcatcaatt-aagtataatttcattacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccata 17471646  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||    
17471645 atcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttatcaacaattgttcatcaacccattttcatacaa-catgagaaa 17471553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 180 - 384
Target Start/End: Original strand, 23514650 - 23514852
Alignment:
180 acatctcattttaacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccaca 279  Q
    ||||||||||| ||  | ||||||||||  ||||  |||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| |||||    
23514650 acatctcatttcaatcaaaacatatcaaatttcatcaatt-aagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccaca 23514748  T
280 aacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatg 379  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||    
23514749 aacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catg 23514847  T
380 agaaa 384  Q
    |||||    
23514848 agaaa 23514852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 180 - 384
Target Start/End: Complemental strand, 10778137 - 10777935
Alignment:
180 acatctcattttaacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccaca 279  Q
    ||||||||||| ||  | ||||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| |||||    
10778137 acatctcatttcaatcaaaacatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccaca 10778039  T
280 aacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatg 379  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||    
10778038 aacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catg 10777940  T
380 agaaa 384  Q
    |||||    
10777939 agaaa 10777935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 91 - 350
Target Start/End: Original strand, 32950693 - 32950952
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    |||| ||||||||| | |||| | ||||||||||| ||||||||||||||||||||||||||||||  ||  | |||||||||||||||||||||| |||    
32950693 catcttcaatccatgaatatgcagacccaagtcatgattcacccacaacaacatcagttaatagcatcaacatcaatggaacatgaatcacatctctttt 32950792  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagctt-gacatttatacatactttaaaacatgtaatttcatccacaaacataccat 289  Q
     ||||||||||||  || |||||| | |||| | | ||||||||| ||| ||| |||||||||||||| ||||||||||||||| |||||| ||||| ||    
32950793 caacaacaacatagtaaaattcaccatttga-gcacaatttcataactttgacctttatacatactttgaaacatgtaatttcaaccacaatcatacaat 32950891  T
290 aatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaatt 350  Q
     ||| |||| |||| |||| ||||||| ||||||||  ||||||||||||||||| |||||    
32950892 tatcatcaaatcatacacacgaaaataacatcacagttagagcacgaatttaacaacaatt 32950952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 227 - 375
Target Start/End: Original strand, 23328693 - 23328840
Alignment:
227 aatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagc 326  Q
    ||||||| | |||||||||||||||||| || || |||||||||||||||||||||||||||||||| |||||||| | | ||| ||| |||| || | |    
23328693 aatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcaagtataag-aaacagcaacataac 23328791  T
327 aagagcacgaatttaacatcaattgttcatcaacccattttcatacaac 375  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||    
23328792 aagagcacgaatttgacatgaattgttcatcaacccattttcatacaac 23328840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 227 - 375
Target Start/End: Original strand, 24616297 - 24616444
Alignment:
227 aatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagc 326  Q
    ||||||| | |||||||||||||||||| || || |||||||||||||||||||||||||||||||  |||||||| | | ||| ||| |||| || | |    
24616297 aatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataattatcaattcaagtataag-aaacagcaacataac 24616395  T
327 aagagcacgaatttaacatcaattgttcatcaacccattttcatacaac 375  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||    
24616396 aagagcacgaatttgacatgaattgttcatcaacccattttcatacaac 24616444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 227 - 375
Target Start/End: Original strand, 24712673 - 24712820
Alignment:
227 aatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagc 326  Q
    ||||||| | |||||||||||||||||| || || |||||||||||||||||||||||||||||||  |||||||| | | ||| ||| |||| || | |    
24712673 aatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataattatcaattcaagtataag-aaacagcaacataac 24712771  T
327 aagagcacgaatttaacatcaattgttcatcaacccattttcatacaac 375  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||    
24712772 aagagcacgaatttgacatgaattgttcatcaacccattttcatacaac 24712820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 227 - 375
Target Start/End: Original strand, 24745691 - 24745838
Alignment:
227 aatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagc 326  Q
    ||||||| | |||||||||||||||||| || || |||||||||||||||||||||||||||||||  |||||||| | | ||| ||| |||| || | |    
24745691 aatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataattatcaattcaagtataag-aaacagcaacataac 24745789  T
327 aagagcacgaatttaacatcaattgttcatcaacccattttcatacaac 375  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||    
24745790 aagagcacgaatttgacatgaattgttcatcaacccattttcatacaac 24745838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 259 - 375
Target Start/End: Original strand, 27010008 - 27010124
Alignment:
259 aaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatca 358  Q
    ||||||||||||||| | |||  ||||| || ||| |||||||||||| |  || ||| ||||||||||||||||||||||| |||| ||||||||||||    
27010008 aaacatgtaatttcaccaacactcatacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatca 27010107  T
359 acccattttcatacaac 375  Q
    |||||||||||||||||    
27010108 acccattttcatacaac 27010124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 295 - 384
Target Start/End: Complemental strand, 18778041 - 18777953
Alignment:
295 tcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    |||||||||||| |  || ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
18778041 tcaattcatgcatacaaacataacatcacagcaagagcacgaatttaacatgaattgttcatcaacccattttcatacaa-catgagaaa 18777953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 295 - 384
Target Start/End: Original strand, 12577 - 12665
Alignment:
295 tcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    |||||||||||| |  || ||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||    
12577 tcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaa-catgagaaa 12665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 295 - 384
Target Start/End: Original strand, 25426831 - 25426919
Alignment:
295 tcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    |||||||||||| |  || ||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||    
25426831 tcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaa-catgagaaa 25426919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 91 - 350
Target Start/End: Complemental strand, 18531330 - 18531073
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    |||||||||| ||| | ||||||||||| ||  || ||||| | |||||||||||| |||| ||||||||  | ||| |||||||||||| |||||| ||    
18531330 catcatcaattcatgaatatgtatacccgagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacatgaatcatatctcaatt 18531231  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||||||||| || ||| |||||| |||||||    | ||||| | ||| |||||| |||||| ||   |||||||||||||| | |||| ||||| ||     
18531230 caacaacaacttagcaaaattcaccaattgaacacaattttcacaacttcacatttttacataatt--gaacatgtaatttcaccaacaatcatacaatt 18531133  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaatt 350  Q
    ||| |||||||||||| |  || ||| ||||||||   ||||||||||||| || |||||    
18531132 atcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaatt 18531073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 260 - 384
Target Start/End: Complemental strand, 29188368 - 29188245
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    |||||||||||||| | |||| ||||| || ||| |||||||||||| |  || ||| |||||||| |||||||||||| || ||| ||||||||||| |    
29188368 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaagagcacgaatctagcatgaattgttcatcga 29188269  T
360 cccattttcatacaaccatgagaaa 384  Q
    ||||||||||||||| |||||||||    
29188268 cccattttcatacaa-catgagaaa 29188245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 260 - 371
Target Start/End: Complemental strand, 43443479 - 43443368
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    |||||||||||||| | |||| ||||| |  | | |||||||||||| |  || ||| |||||||||||||||||||||||||||| |||||||||||||    
43443479 aacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttaacatgaattgttcatcaa 43443380  T
360 cccattttcata 371  Q
     |||||||||||    
43443379 tccattttcata 43443368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 384
Target Start/End: Original strand, 19500102 - 19500190
Alignment:
295 tcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    |||||||||||| |  || ||| |||||||||||||||||||||||| ||| || ||||||||||||||||||||||||| |||||||||    
19500102 tcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaagtgttcatcaacccattttcatacaa-catgagaaa 19500190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 384
Target Start/End: Complemental strand, 22366530 - 22366442
Alignment:
295 tcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    |||||||||||| |  || ||| |||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||| |||||||||    
22366530 tcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgctcatcaacccattttcatacaa-catgagaaa 22366442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 384
Target Start/End: Complemental strand, 21073621 - 21073556
Alignment:
318 catcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    |||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||| |||||||||    
21073621 catcacagcaagagcacgaatttagcatgaattgttcattaacccattttcatacaa-catgagaaa 21073556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 4200069 - 4199954
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    |||||||||||||| | |||| ||||| |  | | |||||||||||| |  || ||| ||||||| |||||||||||||||| ||| |||| ||||||||    
4200069 aacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagcatgaattattcatcaa 4199970  T
360 cccattttcatacaac 375  Q
    | ||||||||||||||    
4199969 ctcattttcatacaac 4199954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 221
Target Start/End: Complemental strand, 22054096 - 22053966
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    |||||||||| ||| | |||||| |||||||  || ||||| | |||||||||||| |||| ||||||||  | ||| |||||||||||| |||||| ||    
22054096 catcatcaattcatgaatatgtagacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacatgaatcatatctcaatt 22053997  T
191 taacaacaacatatcaagattcactaattga 221  Q
     ||||||||| || ||| |||||| ||||||    
22053996 caacaacaacttagcaaaattcaccaattga 22053966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 23328558 - 23328611
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacat 144  Q
    ||||||||||||| ||||| |||||||||||| ||||||||| |||||||||||    
23328558 catcatcaatccacaattaagtatacccaagttataattcactcacaacaacat 23328611  T

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Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 24616165 - 24616216
Alignment:
93 tcatcaatccataattatgtatacccaagtcataattcacccacaacaacat 144  Q
    ||||||||||| ||||| |||||||||||| ||||||||| |||||||||||    
24616165 tcatcaatccacaattaagtatacccaagttataattcactcacaacaacat 24616216  T

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Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 24712541 - 24712592
Alignment:
93 tcatcaatccataattatgtatacccaagtcataattcacccacaacaacat 144  Q
    ||||||||||| ||||| |||||||||||| ||||||||| |||||||||||    
24712541 tcatcaatccacaattaagtatacccaagttataattcactcacaacaacat 24712592  T

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Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 24745559 - 24745610
Alignment:
93 tcatcaatccataattatgtatacccaagtcataattcacccacaacaacat 144  Q
    ||||||||||| ||||| |||||||||||| ||||||||| |||||||||||    
24745559 tcatcaatccacaattaagtatacccaagttataattcactcacaacaacat 24745610  T

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Target: scaffold0066 (Bit Score: 191; Significance: 1e-103; HSPs: 3)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 91 - 385
Target Start/End: Original strand, 54416 - 54709
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    |||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||  | ||||||||||||||||||||||||||    
54416 catcatcaatccataaatatgtatacccaactcatgattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcattt 54515  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     |||||||||||||||| |||||| |||||| ||| ||||||||| ||||||||||||||||||||| ||||||| ||||||| |||||| ||||| ||     
54516 caacaacaacatatcaaaattcaccaattga-gtacaatttcataacttgacatttatacatactttgaaacatgcaatttcacccacaatcatacaatt 54614  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaat 385  Q
    ||| |||||||||||||||||||||||||||||||||||  ||||||||||||| ||||| |||||||||||||||||||||||| |||||||||    
54615 atcatcaattcatgcacaagaaaatagcatcacagcaaggacacgaatttaacaacaattattcatcaacccattttcatacaacaatgagaaat 54709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 136 - 385
Target Start/End: Original strand, 45075 - 45323
Alignment:
136 caacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattttaacaacaacatatcaagattcactaattgaagtataatttcata 235  Q
    |||||||||||||||||||||| ||  | |||||||||||||||||||||||||| |||||||||||||||| |||||| |||||| ||| ||||||| |    
45075 caacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcatttcaacaacaacatatcaaaattcaccaattga-gtacaatttcaaa 45173  T
236 gcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacg 335  Q
     ||||||||||||||||||||| ||||||||||||||| |||||| ||||| || ||| ||||||||||||||  |||||||||||||| |||| |||||    
45174 acttgacatttatacatactttgaaacatgtaatttcacccacaatcatacaattatcatcaattcatgcacatcaaaatagcatcacaacaagggcacg 45273  T
336 aatttaacatcaattgttcatcaacccattttcatacaaccatgagaaat 385  Q
    ||||||||| ||||| |||||||||||||||||||||||| |||||||||    
45274 aatttaacaacaattattcatcaacccattttcatacaacaatgagaaat 45323  T

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Target: scaffold0066; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 91 - 157
Target Start/End: Original strand, 45011 - 45077
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaa 157  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
45011 catcatcaatccataaatatgtatacccaagtcatgattcacccacaacaacatcagttaatagcaa 45077  T

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Target: chr8 (Bit Score: 186; Significance: 1e-100; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 91 - 384
Target Start/End: Original strand, 16195230 - 16195522
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    |||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||| ||  | ||||||||||||||||||||||||||    
16195230 catcatcaatccataattatatatacctaagtcataattcaccctcaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcattt 16195329  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     |||||||||||||||| |||   ||| | ||||||||| ||||| ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||    
16195330 caacaacaacatatcaaaatttcataaattaagtataatctcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccata 16195429  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||||||||||||| |||||||||||||| ||| ||||||||| || ||||||||||||||||||||||||||||| |||||||||    
16195430 atcatcaattcatgcacaagaacatagcatcacagcacgagaacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 16195522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 22006514 - 22006223
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    |||||||| |||| ||||| |||||||||| |||| |||||| ||||| |||||||||||| |  ||  |  | ||||||| ||||||||||||||||||    
22006514 catcatcagtccacaattaagtatacccaaatcatgattcactcacaataacatcagttaacaataaccacatcaatggaatatgaatcacatctcattt 22006415  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||    
22006414 caatcaaaacatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccata 22006316  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||    
22006315 atcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 22006223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 13662521 - 13662230
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    |||||||||||||||||||||||||||||| |||| |||||| ||||| | |||||||||| |  ||  |  | ||||||| ||||||||||||||||||    
13662521 catcatcaatccataattatgtatacccaaatcatgattcactcacaatagcatcagttaacaataaccacatcaatggaatatgaatcacatctcattt 13662422  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||    
13662421 caatcaaaacatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccata 13662323  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |  |||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||| |||||||||    
13662322 atcatncattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgtttatcaacccattttcatacaa-catgagaaa 13662230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 271616 - 271325
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||||| |  ||  |  ||||||||| |||||||||||||| |||    
271616 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 271517  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | | ||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
271516 caatcaaagcatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccata 271418  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||    
271417 atcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 271325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 91 - 384
Target Start/End: Original strand, 644304 - 644595
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||||| |  ||  |  ||||||||| |||||||||||||| |||    
644304 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 644403  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | | ||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
644404 caatcaaagcatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccata 644502  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||    
644503 atcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 644595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 91 - 384
Target Start/End: Original strand, 830039 - 830330
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||||| |  ||  |  ||||||||| |||||||||||||| |||    
830039 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 830138  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | | ||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
830139 caatcaaagcatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccata 830237  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||    
830238 atcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 830330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 15319415 - 15319124
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||||| |  ||  |  |||||||||||||||||||||||| |||    
15319415 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaacatgaatcacatctctttt 15319316  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  |||| ||| ||||||||||| ||  ||||||||||||||||  ||||||||||||||| ||| ||||||||||||    
15319315 caatcaaaacatatcaaatttcatcaatt-aagcataatttcataactcaacatttatacatacttagaaacatgtaatttcacccataaacataccata 15319217  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||    
15319216 atcatcaattcaagcacaagaaaatagtatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 15319124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 15499784 - 15499493
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||||| |  ||  |  |||||||||||||||||||||||| |||    
15499784 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaacatgaatcacatctctttt 15499685  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  |||| ||| ||||||||||| ||  ||||||||||||||||  ||||||||||||||| ||| ||||||||||||    
15499684 caatcaaaacatatcaaatttcatcaatt-aagcataatttcataactcaacatttatacatacttagaaacatgtaatttcacccataaacataccata 15499586  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||    
15499585 atcatcaattcaagcacaagaaaatagtatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 15499493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 22089050 - 22088759
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||||| |  ||  |  ||||||||| |||||||||||||| |||    
22089050 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 22088951  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| | | ||||||||||||    
22088950 caatcaaaacatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacctataaacataccata 22088852  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||| |||||||||    
22088851 atcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacacattttcatacaa-catgagaaa 22088759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 180 - 384
Target Start/End: Complemental strand, 13721095 - 13720893
Alignment:
180 acatctcattttaacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccaca 279  Q
    ||||||||||| ||  | ||||||||||  ||||  |||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| |||||    
13721095 acatctcatttcaatcaaaacatatcaaatttcatcaatt-aagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccaca 13720997  T
280 aacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatg 379  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||| ||||    
13720996 aacataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catg 13720898  T
380 agaaa 384  Q
    |||||    
13720897 agaaa 13720893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 180 - 384
Target Start/End: Complemental strand, 16873218 - 16873016
Alignment:
180 acatctcattttaacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccaca 279  Q
    ||||||||||| ||| | ||||||||||  ||||  |||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| |||||    
16873218 acatctcatttcaaccaaaacatatcaaatttcatcaatt-aagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccaca 16873120  T
280 aacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatg 379  Q
    |||||||||||||| |||||||||||||||||||||| ||| ||| |||||||||||||||| |  ||||||||||||||||||||||||||||| ||||    
16873119 aacataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaa-catg 16873021  T
380 agaaa 384  Q
    |||||    
16873020 agaaa 16873016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 259 - 375
Target Start/End: Complemental strand, 21844657 - 21844541
Alignment:
259 aaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatca 358  Q
    ||||||||||||||| | |||| ||||| || ||| |||||||||||| |  || ||| ||||||||||||||||||||||| |||| ||||||||||||    
21844657 aaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatca 21844558  T
359 acccattttcatacaac 375  Q
    ||||| |||||||||||    
21844557 acccaatttcatacaac 21844541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 259 - 375
Target Start/End: Complemental strand, 21852050 - 21851934
Alignment:
259 aaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatca 358  Q
    |||||| |||||||| | |||| ||||| || ||| |||||||||||| |  || ||| ||||||||||||||||||||||| |||| ||||||||||||    
21852050 aaacatttaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatca 21851951  T
359 acccattttcatacaac 375  Q
    ||||| |||||||||||    
21851950 acccaatttcatacaac 21851934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 260 - 384
Target Start/End: Original strand, 24549149 - 24549272
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    |||||||||||||| | |||| ||||| || ||| |||||||||||| |  || ||| |||||||| |||||||||||| || ||| |||||||||||||    
24549149 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaagagcacgaatctagcatgaattgttcatcaa 24549248  T
360 cccattttcatacaaccatgagaaa 384  Q
    ||||||||||||||| |||||||||    
24549249 cccattttcatacaa-catgagaaa 24549272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 260 - 384
Target Start/End: Complemental strand, 6774342 - 6774219
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    |||||||||||||| | |||| ||||| || ||| |||||||||||| |  || ||| |||||||| |||||||||||| || ||| |||||||||||||    
6774342 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaagagcacgaatctagcatgaattgttcatcaa 6774243  T
360 cccattttcatacaaccatgagaaa 384  Q
    |||||||||||| || |||||||||    
6774242 cccattttcatataa-catgagaaa 6774219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 16674476 - 16674361
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    |||||||||||||| | |||| ||||| |  | | | |||||||||| || || ||| |||||||| ||||||||||||||| ||| ||||||||| |||    
16674476 aacatgtaatttcaccaacaatcatacaactaacataaattcatgcataaaaacataacatcacagaaagagcacgaatttagcatgaattgttcaacaa 16674377  T
360 cccattttcatacaac 375  Q
    ||||||||||||||||    
16674376 cccattttcatacaac 16674361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 375
Target Start/End: Original strand, 30120890 - 30121005
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    |||||||||||||| | |||| ||||| |  | | | |||||||||| |  || ||| |||||||||||||||||||||||| ||| |||||||||||||    
30120890 aacatgtaatttcaccaacaatcatacaactaacataaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaa 30120989  T
360 cccattttcatacaac 375  Q
    | ||||||||||||||    
30120990 ctcattttcatacaac 30121005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 174; Significance: 2e-93; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 34414 - 34123
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||||||||  ||||||||||||||| |||||| ||||| | |||||||||||||||| ||  |||||||||||||||||| |||||||||    
34414 catcatcaatccataatttagtatacccaagtcatgattcactcacaatagcatcagttaatagcaacaacattaatggaacatgaatcatatctcattt 34315  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     |||||||||||||| | |||||  |||| |||||||| |||||| ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||    
34314 caacaacaacatatccaaattcatcaatt-aagtataacttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccata 34216  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||||||||||||||||||| |||||||||||||||||||||| || ||||| |||||||||||| ||||||||||| ||||||||    
34215 atcatcaattcatgcacaagaaaatagcttcacagcaagagcacgaatttagcaacaatttttcatcaaccca-tttcatacaacaatgagaaa 34123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 162; Significance: 2e-86; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 91 - 384
Target Start/End: Original strand, 1556005 - 1556296
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| ||||||||||| ||||| |||||||||||| |  || ||  | ||||||| |||||| |||||||||||    
1556005 catcatcaatccacaattaagtatacccaattcataattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattacatctcattt 1556104  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  |||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||    
1556105 caattaaaacatatcaaatttcatcaatt-aagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccata 1556203  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||    
1556204 atcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 1556296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 22225994 - 22225703
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||||| |  ||  |  ||||||||| ||||||||||||||||||    
22225994 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctcattt 22225895  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||| ||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
22225894 caatcaaaacatttcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccata 22225796  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
22225795 atcatcaattcatgcacaagaaaatagcatcacagaaagagcacgaatttaacaacaattgttcatcaacccattttcatacaa-catgagaaa 22225703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 91 - 375
Target Start/End: Original strand, 19610018 - 19610301
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||||||||| ||||||||||||||| |||||| ||||||| |||||||||| |  || ||  | ||||||| |||||  |||||||||||    
19610018 catcatcaatccataattaagtatacccaagtcatgattcactcacaacagcatcagttaacaataacaacatcaatggaatatgaactacatctcattt 19610117  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  ||| |||||||||||| ||| ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||    
19610118 caatcaaaacatatcaaatttcatcaat-gaagtataattttataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccata 19610216  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaac 375  Q
    | | || |||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||    
19610217 accatcgattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaataattgttcatcaacccattttcatacaac 19610301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 16376629 - 16376338
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||||| |  ||  |  ||||||||| |||||||||||||| |||    
16376629 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 16376530  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
16376529 caatcaaaacatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccata 16376431  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||    
16376430 atcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 16376338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 16383953 - 16383662
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||||| |  ||  |  ||||||||| |||||||||||||| |||    
16383953 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 16383854  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
16383853 caatcaaaacatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccata 16383755  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||    
16383754 atcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 16383662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 91 - 384
Target Start/End: Original strand, 10488699 - 10488990
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||||| |  ||  |  ||||||||| |||||||||||||| |||    
10488699 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 10488798  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | | ||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
10488799 caatcaaagcatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccata 10488897  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||    
10488898 atcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 10488990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 16556395 - 16556104
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||||| |  ||  |  ||||||||| |||||||||||||| |||    
16556395 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 16556296  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
16556295 caatcaaaacatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccata 16556197  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||| |||||||||    
16556196 atcatcaattcaagcacaagaaaatagcatcacagcaggagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 16556104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 16632951 - 16632660
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||||| |  ||  |  ||||||||| |||||||||||||| |||    
16632951 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 16632852  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
16632851 caatcaaaacatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccata 16632753  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||| |||||||||    
16632752 atcatcaattcaagcacaagaaaatagcatcacagcaggagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 16632660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 180 - 384
Target Start/End: Original strand, 16231981 - 16232183
Alignment:
180 acatctcattttaacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccaca 279  Q
    ||||||||||| ||  | ||||||||||  ||||  |||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| |||||    
16231981 acatctcatttcaatcaaaacatatcaaatttcatcaatt-aagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccaca 16232079  T
280 aacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatg 379  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||    
16232080 aacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catg 16232178  T
380 agaaa 384  Q
    |||||    
16232179 agaaa 16232183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 180 - 384
Target Start/End: Complemental strand, 18086990 - 18086788
Alignment:
180 acatctcattttaacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccaca 279  Q
    ||||||||||| ||  | ||||||||||  ||||  |||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| |||||    
18086990 acatctcatttcaatcaaaacatatcaaatttcatcaatt-aagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccaca 18086892  T
280 aacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatg 379  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||| ||||    
18086891 aacataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catg 18086793  T
380 agaaa 384  Q
    |||||    
18086792 agaaa 18086788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 180 - 384
Target Start/End: Complemental strand, 13620961 - 13620759
Alignment:
180 acatctcattttaacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccaca 279  Q
    ||||||||||| ||  | ||||||||||  ||||  |||| ||||||||||||||| ||| ||||||||||||||||| ||||||| ||||||| |||||    
13620961 acatctcatttcaatcaaaacatatcaaatttcatcaatt-aagtataatttcataacttaacatttatacatactttgaaacatgcaatttcacccaca 13620863  T
280 aacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatg 379  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||| || ||||||||||||||||||||||||||||| ||||    
13620862 aacataccataatcatcaattcatgcacaagaaaatagcattacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catg 13620764  T
380 agaaa 384  Q
    |||||    
13620763 agaaa 13620759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 180 - 384
Target Start/End: Original strand, 23977858 - 23978060
Alignment:
180 acatctcattttaacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccaca 279  Q
    ||||||||||| ||| | ||||||||||  ||||  |||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| |||||    
23977858 acatctcatttcaaccaaaacatatcaaatttcatcaatt-aagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccaca 23977956  T
280 aacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatg 379  Q
    |||||||||||||| |||||||||||||||||||||| ||| ||| |||||||||||||||| |  ||||||||||||||||||||||||||||| ||||    
23977957 aacataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaa-catg 23978055  T
380 agaaa 384  Q
    |||||    
23978056 agaaa 23978060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 169 - 385
Target Start/End: Original strand, 29665951 - 29666166
Alignment:
169 gaacatgaatcacatctcattttaacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaa 268  Q
    |||||||||||| ||||||||| ||||||||| || ||| |||||| |||||| ||| ||||||||| |||||||||||| |||||||| ||||||||||    
29665951 gaacatgaatcatatctcatttcaacaacaacttagcaaaattcaccaattga-gtacaatttcataacttgacatttatgcatactttgaaacatgtaa 29666049  T
269 tttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttc 368  Q
    ||||| |||||| ||||| || ||| ||||||||| || ||||||||| ||||||||| ||||||||||||||||| ||||| | ||||| |||||||||    
29666050 tttcacccacaatcatacaattatcatcaattcatacataagaaaataacatcacagctagagcacgaatttaacaacaattatccatcaccccattttc 29666149  T
369 atacaaccatgagaaat 385  Q
    ||||||| |||||||||    
29666150 atacaacaatgagaaat 29666166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 230 - 384
Target Start/End: Original strand, 19299375 - 19299528
Alignment:
230 ttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaag 329  Q
    |||||| ||| ||||||||||||||||| |||||||||||| || ||| ||||||||||||||| ||||||||  |||||||||||||||| ||||||||    
19299375 ttcataacttaacatttatacatactttgaaacatgtaattccacccataaacataccataatcatcaattcaaacacaagaaaatagcattacagcaag 19299474  T
330 agcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||    
19299475 agcacgaatttaacaacaattgtccatcaacccattttcatacaa-catgagaaa 19299528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 266 - 384
Target Start/End: Complemental strand, 22251648 - 22251531
Alignment:
266 taatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccatt 365  Q
    |||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
22251648 taatttcacccataaacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcatcaacccatt 22251549  T
366 ttcatacaaccatgagaaa 384  Q
    ||||||||| |||||||||    
22251548 ttcatacaa-catgagaaa 22251531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 227 - 375
Target Start/End: Complemental strand, 29869896 - 29869749
Alignment:
227 aatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagc 326  Q
    ||||||| | ||||||| |||||||||| || || |||||||||||||||||||||||||||||||| |||||||||| | ||| ||| |||| || | |    
29869896 aatttcacaacttgacacttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag-aaacagcaacataac 29869798  T
327 aagagcacgaatttaacatcaattgttcatcaacccattttcatacaac 375  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||    
29869797 aagagcacgaatttgacatgaattgttcatcaacccattttcatacaac 29869749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 91 - 273
Target Start/End: Original strand, 27740838 - 27741019
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    |||||||||| ||| | |||| ||||||||  ||| ||||| ||||||||||||||| |||||||||  |  | ||| |||||||||||| |||||| ||    
27740838 catcatcaattcatgaatatgcatacccaaaccatgattcatccacaacaacatcagataatagcaaccacatcaattgaacatgaatcatatctcaatt 27740937  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttca 273  Q
     |||||| || || ||| |||||| |||||| | | ||||||||| ||||||||||||||||||||  |||||||||||||||    
27740938 caacaacgacttagcaaaattcaccaattga-gcacaatttcataacttgacatttatacatacttcgaaacatgtaatttca 27741019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 295 - 384
Target Start/End: Complemental strand, 16825801 - 16825713
Alignment:
295 tcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    |||||||||||| |  || ||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||    
16825801 tcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaa-catgagaaa 16825713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 260 - 384
Target Start/End: Complemental strand, 1650189 - 1650066
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    |||||||||||||| | |||| ||||| || ||| |||||||||||| |  ||  || |||||||| |||||||||||| || ||| |||||||||||||    
1650189 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcacagtaagagcacgaatctagcatgaattgttcatcaa 1650090  T
360 cccattttcatacaaccatgagaaa 384  Q
    ||||||||||||||| |||||||||    
1650089 cccattttcatacaa-catgagaaa 1650066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 295 - 384
Target Start/End: Original strand, 25175766 - 25175854
Alignment:
295 tcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    |||||||||||| |  || ||| || ||||||||||||||||||||| ||| ||||||||||||| |||||||||||||| |||||||||    
25175766 tcaattcatgcatacaaacataacaacacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaa-catgagaaa 25175854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 318 - 384
Target Start/End: Complemental strand, 27654009 - 27653944
Alignment:
318 catcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    |||||||||||||||||||||||| ||| | ||||||||||| |||||||||||||| |||||||||    
27654009 catcacagcaagagcacgaatttagcatgatttgttcatcaatccattttcatacaa-catgagaaa 27653944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 341
Target Start/End: Complemental strand, 14626214 - 14626133
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaattta 341  Q
    |||||||||||||| | |||| ||||| || ||| |||||||||||| |  || ||| ||||||||||||||||||||||||    
14626214 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattta 14626133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 91 - 146
Target Start/End: Original strand, 29665892 - 29665947
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatca 146  Q
    ||||| |||||||| | |||| ||||||||||||| ||||||||||||||||||||    
29665892 catcaccaatccatgaatatgcatacccaagtcatgattcacccacaacaacatca 29665947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 108 - 221
Target Start/End: Original strand, 23153464 - 23153577
Alignment:
108 tatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattttaacaacaacatatcaa 207  Q
    ||||||||||||||| || ||||| | || ||||||||| |||| ||| ||||| | ||| ||||| |||||| | |||| | |||||||||| || |||    
23153464 tatgtatacccaagtaatgattcatcaaccacaacatcaattaacagccataatatcaattgaacaagaatcataactcaatctaacaacaacttagcaa 23153563  T
208 gattcactaattga 221  Q
     |||||| ||||||    
23153564 aattcaccaattga 23153577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 29870031 - 29869978
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacat 144  Q
    |||||||||||||| |||| ||| |||||||| ||||||||| |||||||||||    
29870031 catcatcaatccatcattaagtacacccaagttataattcactcacaacaacat 29869978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 341
Target Start/End: Original strand, 15862609 - 15862719
Alignment:
229 tttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaa 328  Q
    ||||||| ||| ||||||||||||| || ||  ||||| |||||| | |||| ||||| || ||| |||||||||||| |  || ||| ||||||||  |    
15862609 tttcataacttcacatttatacataattgaa--catgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtta 15862706  T
329 gagcacgaattta 341  Q
    |||||||||||||    
15862707 gagcacgaattta 15862719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 151
Target Start/End: Complemental strand, 33314474 - 33314414
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaa 151  Q
    ||||||||||||| ||||| |||||||||| |||| ||||||  |||| | ||||||||||    
33314474 catcatcaatccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaa 33314414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 150; Significance: 3e-79; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 15760370 - 15760079
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||| |||||| ||||| |||||||||||| |  || ||  | ||||||| |||||| |||||||||||    
15760370 catcatcaatccacaattaagtatacccaattcattattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattacatctcattt 15760271  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  |||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||||||| ||||    
15760270 caattaaaacatatcaaatttcatcaatt-aagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacatatcata 15760172  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||| |||||||||    
15760171 atcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaataattgttcatcaacccattttcatacaa-catgagaaa 15760079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 15951047 - 15950756
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||| ||||||  |||| | |||||||||| |  ||| |  | ||||||| ||||||||||||||||||    
15951047 catcatcaatccacaattaagtatacccaaatcatgattcacttacaatagcatcagttaacaataatcacatcaatggaatatgaatcacatctcattt 15950948  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||    
15950947 caatcaaaacatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccata 15950849  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||    
15950848 atcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 15950756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 91 - 384
Target Start/End: Original strand, 7822728 - 7823019
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||||| |  ||  |  ||||||||| |||||||||||||| |||    
7822728 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 7822827  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | | ||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
7822828 caatcaaagcatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccata 7822926  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||    
7822927 atcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 7823019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 91 - 384
Target Start/End: Original strand, 7830039 - 7830330
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||||| |  ||  |  ||||||||| |||||||||||||| |||    
7830039 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 7830138  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | | ||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
7830139 caatcaaagcatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccata 7830237  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||    
7830238 atcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 7830330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 27101893 - 27101602
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||||| |  ||  |  ||||||||| |||||||||||||| |||    
27101893 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 27101794  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | | ||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
27101793 caatcaaagcatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccata 27101695  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||    
27101694 atcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 27101602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 27109241 - 27108950
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||||| |  ||  |  ||||||||| |||||||||||||| |||    
27109241 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 27109142  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | | ||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
27109141 caatcaaagcatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccata 27109043  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||    
27109042 atcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 27108950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 91 - 384
Target Start/End: Original strand, 27176433 - 27176724
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||||| |  ||  |  ||||||||| |||||||||||||| |||    
27176433 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 27176532  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | | ||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
27176533 caatcaaagcatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccata 27176631  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||    
27176632 atcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 27176724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 38783985 - 38783694
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||||| |  ||  |  ||||||||| |||||||||||||| |||    
38783985 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 38783886  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | | ||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
38783885 caatcaaagcatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccata 38783787  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||    
38783786 atcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 38783694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 180 - 384
Target Start/End: Complemental strand, 18980188 - 18979986
Alignment:
180 acatctcattttaacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccaca 279  Q
    ||||||||||| ||  | ||||||||||  ||||  |||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| |||||    
18980188 acatctcatttcaatcaaaacatatcaaatttcatcaatt-aagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccaca 18980090  T
280 aacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatg 379  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||    
18980089 aacataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catg 18979991  T
380 agaaa 384  Q
    |||||    
18979990 agaaa 18979986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 180 - 384
Target Start/End: Complemental strand, 14251065 - 14250863
Alignment:
180 acatctcattttaacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccaca 279  Q
    ||||||||||| ||  | ||||||||||  ||||  |||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| |    
14251065 acatctcatttcaatcaaaacatatcaaatttcatcaatt-aagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccaaa 14250967  T
280 aacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatg 379  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
14250966 aacataccataatcatcaattcatgcacaagaaaatagcattacaacaagagcacgaatttaacaacaattgttcatcaacccattttcatacaa-catg 14250868  T
380 agaaa 384  Q
    |||||    
14250867 agaaa 14250863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 180 - 384
Target Start/End: Original strand, 13758459 - 13758661
Alignment:
180 acatctcattttaacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccaca 279  Q
    ||||||||||| ||| | ||||||||||  ||||  |||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| |||||    
13758459 acatctcatttcaaccaaaacatatcaaatttcatcaatt-aagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccaca 13758557  T
280 aacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatg 379  Q
    |||||||||||||| |||||||||||||||||||||| ||| ||| |||||||||||||||| |  ||||||||||||||||||||||||||||| ||||    
13758558 aacataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaa-catg 13758656  T
380 agaaa 384  Q
    |||||    
13758657 agaaa 13758661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 180 - 384
Target Start/End: Original strand, 15927657 - 15927859
Alignment:
180 acatctcattttaacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccaca 279  Q
    ||||||||||| ||  | ||||||||||  ||||  |||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| |||||    
15927657 acatctcatttcaatcaaaacatatcaaatttcatcaatt-aagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccaca 15927755  T
280 aacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatg 379  Q
    | |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| || |||||| ||||||| |||||||||||||| ||||    
15927756 agcataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgatcatcaatccattttcatacaa-catg 15927854  T
380 agaaa 384  Q
    |||||    
15927855 agaaa 15927859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 260 - 368
Target Start/End: Complemental strand, 48622754 - 48622646
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||    
48622754 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatatcatcacagtaagagcacgaatttagcatcaattgttcatcaa 48622655  T
360 cccattttc 368  Q
    |||||||||    
48622654 cccattttc 48622646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 227 - 375
Target Start/End: Original strand, 16418633 - 16418780
Alignment:
227 aatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagc 326  Q
    ||||||| | |||||||||||||||||| || || |||||||||||||||||||||||||||||||| |||||||||| | |||  || |||| || | |    
16418633 aatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag-caacagcaacataac 16418731  T
327 aagagcacgaatttaacatcaattgttcatcaacccattttcatacaac 375  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||    
16418732 aagagcacgaatttgacatgaattgttcatcaacccattttcatacaac 16418780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 227 - 375
Target Start/End: Complemental strand, 10000490 - 10000343
Alignment:
227 aatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagc 326  Q
    ||||||| | |||||||||||||||||| || || |||||||||||||||||||||||||||||||| |||||||||| | ||||||  | || || | |    
10000490 aatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataagaaacaa-caacataac 10000392  T
327 aagagcacgaatttaacatcaattgttcatcaacccattttcatacaac 375  Q
    |||||||||||||| |||| ||||||||||||||||||||| |||||||    
10000391 aagagcacgaatttgacataaattgttcatcaacccatttttatacaac 10000343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 115 - 350
Target Start/End: Original strand, 13321038 - 13321273
Alignment:
115 acccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattttaacaa-caacatatcaagattca 213  Q
    ||||||||||| ||||| | |||||||||||| |||| | ||||||  | ||| |||||||||||| |||||| || ||||| |||| || ||| |||||    
13321038 acccaagtcatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaattcaacaatcaacttagcaaaattca 13321137  T
214 ctaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaa 313  Q
    | |||||| | | ||||||||| ||||||||||||||||||||| ||||||||||||||| | |||| ||||| || ||| |||||||||||| |  ||     
13321138 ccaattga-gcacaatttcataacttgacatttatacatactttgaaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaac 13321236  T
314 atagcatcacagcaagagcacgaatttaacatcaatt 350  Q
    ||| ||||||||  |||||||||||||| || |||||    
13321237 ataacatcacagttagagcacgaatttagcaacaatt 13321273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 259 - 375
Target Start/End: Original strand, 13572843 - 13572959
Alignment:
259 aaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatca 358  Q
    ||||||||||||||| | |||| || || || ||| |||||||||||| |  || ||| ||||||||||||||||||||||| |||| ||||||||||||    
13572843 aaacatgtaatttcaccaacaatcacacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatca 13572942  T
359 acccattttcatacaac 375  Q
    |||||||||||||||||    
13572943 acccattttcatacaac 13572959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 260 - 384
Target Start/End: Complemental strand, 16479046 - 16478923
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    |||||||||||||| | |||| ||||| || ||| |||||||||||| |  || ||| |||| ||| |||||||||||| |||||| |||||||||||||    
16479046 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcgcagtaagagcacgaatctaacatgaattgttcatcaa 16478947  T
360 cccattttcatacaaccatgagaaa 384  Q
    ||||||||||||||| |||||||||    
16478946 cccattttcatacaa-catgagaaa 16478923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 260 - 375
Target Start/End: Original strand, 10989577 - 10989692
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    |||||||||||||| | |||| ||||| |  | | |||||||||||| |  || ||| |||||||||||||||||||||||| ||| | |||||||||||    
10989577 aacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgatttgttcatcaa 10989676  T
360 cccattttcatacaac 375  Q
    ||||||||||||||||    
10989677 cccattttcatacaac 10989692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 13911108 - 13910993
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    |||||||||||||| | |||| ||||| || | | |||||||||||| |  || ||| ||||||| |||||||||||||||| ||| |||||||||||||    
13911108 aacatgtaatttcaccaacaatcatacaattaacatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagcatgaattgttcatcaa 13911009  T
360 cccattttcatacaac 375  Q
    | ||||||||||||||    
13911008 ctcattttcatacaac 13910993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 16418498 - 16418551
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacat 144  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
16418498 catcatcaatccataattatgtatacccaagtcataattcactcacaacaacat 16418551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 384
Target Start/End: Complemental strand, 18253931 - 18253808
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    |||||||||||||| | |||| ||||| || ||| |||||||||||| |  || ||| ||| ||||   |||||||||||||  | ||||||||||||||    
18253931 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaattgttcatcaa 18253832  T
360 cccattttcatacaaccatgagaaa 384  Q
    ||||||||||||||| |||||||||    
18253831 cccattttcatacaa-catgagaaa 18253808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 10000625 - 10000572
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacat 144  Q
    ||||||||||||||||||| |||||||||||| ||||||||| |||||||||||    
10000625 catcatcaatccataattaagtatacccaagttataattcactcacaacaacat 10000572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 384
Target Start/End: Original strand, 2437625 - 2437748
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    |||||||||||||| | |||| ||||| |  | | |||||||||||| |  || ||| ||||||| |||||||||||||||| ||  |||||||||| |     
2437625 aacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagcaagaattgttcattat 2437724  T
360 cccattttcatacaaccatgagaaa 384  Q
    ||||||||||||||| |||||||||    
2437725 cccattttcatacaa-catgagaaa 2437748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 91 - 129
Target Start/End: Original strand, 15852456 - 15852494
Alignment:
91 catcatcaatccataattatgtatacccaagtcataatt 129  Q
    |||||||||||||||||||||||||||||||||||||||    
15852456 catcatcaatccataattatgtatacccaagtcataatt 15852494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 384
Target Start/End: Original strand, 15862174 - 15862210
Alignment:
347 aattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    |||||||||||||||||||||||||||| |||||||||    
15862174 aattgttcatcaacccattttcatacaa-catgagaaa 15862210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 149; Significance: 1e-78; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 96 - 384
Target Start/End: Original strand, 46523394 - 46523680
Alignment:
96 tcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattttaaca 195  Q
    |||||||||||||| ||||||||||||||| |||||| ||||||| |||||||||| |  || ||  | ||||||| |||||| ||||||||||| ||      
46523394 tcaatccataattaagtatacccaagtcatgattcactcacaacagcatcagttaacaataacaacatcaatggaatatgaattacatctcatttcaatc 46523493  T
196 acaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcct 295  Q
    | ||||||||||  ||||  ||| |||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||||||| ||||| | |    
46523494 aaaacatatcaaatttcatcaat-gaagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataacataaacat 46523592  T
296 caattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||    
46523593 caattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 46523680  T

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Target: chr1; HSP #2
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 18060014 - 18059723
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||| | |  ||  |  | ||||||| ||||||||||||||||||    
18060014 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttgacaataaccacatcaatggaatatgaatcacatctcattt 18059915  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
18059914 caatcaaaacatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccata 18059816  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
18059815 atcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatacaa-catgagaaa 18059723  T

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Target: chr1; HSP #3
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 91 - 384
Target Start/End: Original strand, 17004638 - 17004929
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||||| |  ||  |  ||||||||| |||||||||||||| |||    
17004638 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 17004737  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | | ||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
17004738 caatcaaagcatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccata 17004836  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||    
17004837 atcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 17004929  T

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Target: chr1; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 91 - 375
Target Start/End: Complemental strand, 38055347 - 38055064
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||||| |  ||  |  ||||||||| |||||||||||||| |||    
38055347 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 38055248  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
38055247 caatcaaaacatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccata 38055149  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaac 375  Q
    ||| |||||||| ||||||||||||| |||||||| || ||||||||||||||| |||||||||| |||||||||||||||||||    
38055148 atcatcaattcaagcacaagaaaataacatcacagtaaaagcacgaatttaacaacaattgttcaccaacccattttcatacaac 38055064  T

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Target: chr1; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 221 - 384
Target Start/End: Original strand, 17148696 - 17148858
Alignment:
221 aagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcat 320  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||    
17148696 aagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaataacat 17148795  T
321 cacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
     ||| |||||||||||||||| |  ||||||||||||||||||||||||||||| |||||||||    
17148796 tacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaa-catgagaaa 17148858  T

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Target: chr1; HSP #6
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 230 - 384
Target Start/End: Complemental strand, 19962617 - 19962464
Alignment:
230 ttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaag 329  Q
    |||||| ||| ||||||||||||||||| |||||||||||| || ||| ||||||||||||||| ||||||||  |||||||||||||||| ||||||||    
19962617 ttcataacttaacatttatacatactttgaaacatgtaattccacccataaacataccataatcatcaattcaaacacaagaaaatagcattacagcaag 19962518  T
330 agcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||    
19962517 agcacgaatttaacaacaattgtccatcaacccattttcatacaa-catgagaaa 19962464  T

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Target: chr1; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 227 - 375
Target Start/End: Complemental strand, 7641054 - 7640907
Alignment:
227 aatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagc 326  Q
    ||||||| | |||||||||||||||||| || || |||||||||||||||||||||||||||||||| |||||||| | | ||| ||| |||| || | |    
7641054 aatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcaagtataag-aaacagcaacataac 7640956  T
327 aagagcacgaatttaacatcaattgttcatcaacccattttcatacaac 375  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||    
7640955 aagagcacgaatttgacatgaattgttcatcaacccattttcatacaac 7640907  T

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Target: chr1; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 227 - 375
Target Start/End: Original strand, 22035583 - 22035730
Alignment:
227 aatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagc 326  Q
    ||||||| | |||||||||||||||||| || || |||||||||||||||||||||||||||||||| |||||||| | | ||| ||| |||| || | |    
22035583 aatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcaagtataag-aaacagcaacataac 22035681  T
327 aagagcacgaatttaacatcaattgttcatcaacccattttcatacaac 375  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||    
22035682 aagagcacgaatttgacatgaattgttcatcaacccattttcatacaac 22035730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 260 - 384
Target Start/End: Original strand, 22227976 - 22228099
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    ||||||||||||||   |||| ||||| || ||| |||||||||||||||||||||| |||||||||||||||||||||||| ||  |||||||||||||    
22227976 aacatgtaatttcactaacaatcatacaattatcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaagaattgttcatcaa 22228075  T
360 cccattttcatacaaccatgagaaa 384  Q
    ||||||||||||||| |||||||||    
22228076 cccattttcatacaa-catgagaaa 22228099  T

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Target: chr1; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 260 - 384
Target Start/End: Original strand, 22232673 - 22232796
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    ||||||||||||||   |||| ||||| || ||| |||||||||||||||||||||| |||||||||||||||||||||||| ||  |||||||||||||    
22232673 aacatgtaatttcactaacaatcatacaattatcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaagaattgttcatcaa 22232772  T
360 cccattttcatacaaccatgagaaa 384  Q
    ||||||||||||||| |||||||||    
22232773 cccattttcatacaa-catgagaaa 22232796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 5072472 - 5072357
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    |||||||||||||| | |||| ||||| |  | | |||||||||||| |  || ||| |||||||||||||||||||||||| ||| |||||||||||||    
5072472 aacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatataaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaa 5072373  T
360 cccattttcatacaac 375  Q
    ||||||||||||||||    
5072372 cccattttcatacaac 5072357  T

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Target: chr1; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 20254312 - 20254365
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacat 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
20254312 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacat 20254365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 18601202 - 18601087
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    |||||||||||||| | |||| ||||| |  | | |||||||||||| |  || ||| |||||||||||||||| ||||||| ||| |||||||||||||    
18601202 aacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcatgaatttagcatgaattgttcatcaa 18601103  T
360 cccattttcatacaac 375  Q
    ||||||||||||||||    
18601102 cccattttcatacaac 18601087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 260 - 384
Target Start/End: Original strand, 2116422 - 2116545
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    |||||||||||||| | |||| ||||| || ||| |||||||||||| |  || ||| |||||||| || ||||||||| || ||| |||||||||||||    
2116422 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagtaaaagcacgaatctagcatgaattgttcatcaa 2116521  T
360 cccattttcatacaaccatgagaaa 384  Q
    |||||||| |||||| |||||||||    
2116522 cccatttttatacaa-catgagaaa 2116545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 260 - 384
Target Start/End: Original strand, 45051590 - 45051713
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    |||||||||||||| | |||| ||||| || ||| |||||||||||| |  ||  || |||||||| |||| ||||||| || ||| |||||||||||||    
45051590 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcacagtaagaacacgaatctagcatgaattgttcatcaa 45051689  T
360 cccattttcatacaaccatgagaaa 384  Q
    ||||||||||||||| |||||||||    
45051690 cccattttcatacaa-catgagaaa 45051713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 22035448 - 22035501
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacat 144  Q
    ||||||||||||||||||| |||||||||||| ||||||||| |||||||||||    
22035448 catcatcaatccataattaagtatacccaagttataattcactcacaacaacat 22035501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 7641189 - 7641136
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacat 144  Q
    ||||||||||||||||||| ||| |||||||| ||||||||| |||||||||||    
7641189 catcatcaatccataattaagtacacccaagttataattcactcacaacaacat 7641136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 146; Significance: 8e-77; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 10595 - 10304
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| ||||||||||||||| |||| | ||||| | |||||||||| | ||| ||  | ||||||| |||||| |||||||||||    
10595 catcatcaatccacaattaagtatacccaagtcatgattccctcacaatagcatcagttaacaacaacaacatcaatggaatatgaattacatctcattt 10496  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  |||| ||||||||||||||| |||  |||||||||||||||| ||||||||||||||| ||||||||||||||||    
10495 caatcaaaacatatcaaatttcatcaatt-aagtataatttcataacttagcatttatacatactttgaaacatgtaatttcacccacaaacataccata 10397  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||||||||||||||||| |||||||||||||||||||||||| || ||||| ||||||||||||||||||||||| |||||||||    
10396 atcatcaattcatgcacaagaaaatatcatcacagcaagagcacgaatttagcaacaattattcatcaacccattttcatacaa-catgagaaa 10304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 91 - 384
Target Start/End: Original strand, 2392 - 2683
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| ||||||||||  ||| |||||| ||||| |||||||||||| |  || ||  | ||||||| |||||| |||||||||||    
2392 catcatcaatccacaattaagtatacccaaaccatgattcactcacaataacatcagttaacaataacaacatcaatggaatatgaattacatctcattt 2491  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     || || ||||||||||  ||||  |||| ||||||||||||||  ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||    
2492 caataaaaacatatcaaatttcatcaatt-aagtataatttcatgacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccata 2590  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    | | ||||||||||||||||||||||||||||| ||||||||||||||| | || ||||||||||||||||||||||||||||| |||||||||    
2591 agcatcaattcatgcacaagaaaatagcatcacggcaagagcacgaattgagcaacaattgttcatcaacccattttcatacaa-catgagaaa 2683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 142; Significance: 2e-74; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 154263 - 153972
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||| |||||||||||| | ||| |||||| |  ||  |  | ||||||| |||| |||||||||||||    
154263 catcatcaatccacaattaagtatacccaaatcatgattcacccacaatagcataagttaacaataaccacatcaatggaatatgattcacatctcattt 154164  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| |||||||||| |||| ||||||||||||||||    
154163 caatcaaaacatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaacttcacccacaaacataccata 154065  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||    
154064 atcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 153972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 318 - 384
Target Start/End: Complemental strand, 169938 - 169873
Alignment:
318 catcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||    
169938 catcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaa-catgagaaa 169873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 326 - 375
Target Start/End: Original strand, 36327 - 36376
Alignment:
326 caagagcacgaatttaacatcaattgttcatcaacccattttcatacaac 375  Q
    |||||||||||||||| ||| ||||||||||||||||| |||||||||||    
36327 caagagcacgaatttagcatgaattgttcatcaacccagtttcatacaac 36376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 138; Significance: 5e-72; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 91 - 384
Target Start/End: Original strand, 31309 - 31600
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||||| |  ||  |  ||||||||| |||||||||||||| |||    
31309 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 31408  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | | ||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
31409 caatcaaagcatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccata 31507  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||    
31508 atcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 31600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 91 - 375
Target Start/End: Original strand, 39646 - 39929
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||| |||||| ||||| | |||||||||| |  || ||  | |||| || |||||| |||||||||||    
39646 catcatcaatccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataacaacatcaatgaaatatgaataacatctcattt 39745  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     || || ||||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||    
39746 caaaaaaaacatatcaaatttcatcaatt-aagaataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaaaataccata 39844  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaac 375  Q
    ||| |||||||||||||| |||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
39845 atcatcaattcatgcacaggaaaatagaatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaac 39929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 138; Significance: 5e-72; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 91 - 384
Target Start/End: Original strand, 39103 - 39394
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||||||||||  |||| | |||||||||| |  ||  |  ||||||||| |||||||||||||| |||    
39103 catcatcaatccacaattaagtatacccaaatcataattcacttacaatagcatcagttaacaataaccacattaatggaatatgaatcacatctctttt 39202  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | | ||||||||  ||||  |||| ||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
39203 caatcaaagcatatcaaatttcatcaatt-aagcataatttcataacttaacatttatacatactttgaaacatgtaatttcacccataaacataccata 39301  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||    
39302 atcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaa-catgagaaa 39394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 260 - 384
Target Start/End: Original strand, 43165 - 43288
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    |||||||||||||| | |||| ||||| || ||| |||||||||||| |  || ||| |||| |||||||||||||||||| |||| ||||| |||||||    
43165 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatagaaacataacatcccagcaagagcacgaatttgacatgaattgctcatcaa 43264  T
360 cccattttcatacaaccatgagaaa 384  Q
    ||||||||||||||| |||||||||    
43265 cccattttcatacaa-catgagaaa 43288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 91 - 384
Target Start/End: Complemental strand, 1831 - 1540
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||| |||||| ||||| | |||||||||| |  || ||  | |||   | |||| | |||||||||||    
1831 catcatcaatccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataacaacatcaattttatatgatttacatctcattt 1732  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  |||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||    
1731 caatcaaaacatatcaaatttcatcaatt-aagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccacaaacataccata 1633  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| ||||||||||||||||||||||||||||||||||| |||||| |||| || ||||||||||||||||||||||||||||| |||||||||    
1632 atcatcaattcatgcacaagaaaatagcatcacagcaagtgcacgattttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 1540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 122; Significance: 2e-62; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 91 - 384
Target Start/End: Original strand, 29162 - 29453
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    |||||||||| || ||||| ||||| |||| |||||||||||  |||| ||||| | |||| |  ||  |  | ||||||| ||||||||||||||||||    
29162 catcatcaatacacaattaagtataaccaaatcataattcactaacaataacataaattaacaataaccacatcaatggaatatgaatcacatctcattt 29261  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  |||| ||| ||||||||||| ||| ||||||| ||||||||| ||||||||||||||| ||| ||||||| ||||    
29262 caatcaaaacatatcaaatttcatcaatt-aagcataatttcataacttaacatttacacatactttgaaacatgtaatttcacccataaacataacata 29360  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    |||  ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
29361 atcaacaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatacaa-catgagaaa 29453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 180 - 384
Target Start/End: Complemental strand, 1681 - 1479
Alignment:
180 acatctcattttaacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccaca 279  Q
    ||||||||||| ||  | ||||||||||  ||||  |||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||| |    
1681 acatctcatttcaatcaaaacatatcaaatttcatcaatt-aagtataatttcataacttaacatttatacatactttgaaacatgtaatttcacccata 1583  T
280 aacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatg 379  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||| || ||||||||||||||||||||||||||||| ||||    
1582 aacataccataatcatcaattcatgcacaagaaaatagcattacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catg 1484  T
380 agaaa 384  Q
    |||||    
1483 agaaa 1479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 115; Significance: 3e-58; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 108 - 350
Target Start/End: Complemental strand, 56346 - 56105
Alignment:
108 tatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattttaacaacaacatatcaa 207  Q
    |||| ||||||||||||| |||||||||||||||||||| |||||||||  ||  | ||||||||||||||||||| || ||| ||||||||| || |||    
56346 tatgcatacccaagtcatgattcacccacaacaacatcaattaatagcatcaacatcaatggaacatgaatcacatatcttttcaacaacaacttagcaa 56247  T
208 gattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcctcaattcatgcac 307  Q
     |||||| | |||| | | ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||| || ||| |||| ||||||||    
56246 aattcaccatttga-gcacaatttcataacttgacatttatacatactttaaaacatgtaatttcagccacaatcatacaattatcatcaaatcatgcac 56148  T
308 aagaaaatagcatcacagcaagagcacgaatttaacatcaatt 350  Q
    | ||||||| ||||||||  ||||||||||||||||| |||||    
56147 acgaaaataacatcacagttagagcacgaatttaacaacaatt 56105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1666 (Bit Score: 111; Significance: 6e-56; HSPs: 1)
Name: scaffold1666
Description:

Target: scaffold1666; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 91 - 341
Target Start/End: Complemental strand, 252 - 3
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    ||||||||||||| ||||| |||||||||| |||| |||||| ||||| | |||||||||| |  ||  |  | |||| || |||||| |||||||||||    
252 catcatcaatccacaattaagtatacccaaatcatgattcactcacaatagcatcagttaacaataactacatcaatgtaatatgaattacatctcattt 153  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     ||  | ||||||||||  ||||  |||| ||||||||||||||| ||| ||||||| ||||||||| ||||||||||||||| ||||||||||||||||    
152 caattaaaacatatcaaatttcatcaatt-aagtataatttcataacttaacatttacacatactttgaaacatgtaatttcacccacaaacataccata 54  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaattta 341  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||||||||    
53 atcatcaattcatgcacaagaaaatagcctcacagcaagagcacgaattta 3  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 98; Significance: 4e-48; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 223 - 384
Target Start/End: Original strand, 54006 - 54165
Alignment:
223 gtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatca 322  Q
    ||||||||||| | ||| ||| |||||||| |||| || |||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
54006 gtataatttcacaacttaacaattatacatgctttgaa-catgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaacagcatca 54104  T
323 cagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| ||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||    
54105 cagtaagagcacgaatttagcatcaattgttcatcaacccattttcata-aaacatgagaaa 54165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 227 - 375
Target Start/End: Original strand, 6733 - 6880
Alignment:
227 aatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagc 326  Q
    ||||||| | |||||||||||||||||| || || |||||||||||||||||||||||||||||||| |||||||||| | ||| ||| |||| || | |    
6733 aatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag-aaacagcaacataac 6831  T
327 aagagcacgaatttaacatcaattgttcatcaacccattttcatacaac 375  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||    
6832 aagagcacgaatttgacatgaattgttcatcaacccattttcatacaac 6880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 6598 - 6651
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacat 144  Q
    ||||||||||||| ||||| |||||||||||| ||||||||| |||||||||||    
6598 catcatcaatccacaattaagtatacccaagttataattcactcacaacaacat 6651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 5300 - 5185
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    |||||||||||||| | |||| ||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
5300 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacaagaattgttcatcaa 5201  T
360 cccattttcatacaac 375  Q
    ||||||||||||||||    
5200 cccattttcatacaac 5185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 223 - 384
Target Start/End: Original strand, 3545 - 3704
Alignment:
223 gtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatca 322  Q
    ||||||||||| | ||| ||| |||||||| |||| || |||||||||||| |||||| |||||||||||| |||||||||| ||||||||| | |||||    
3545 gtataatttcacaacttaacaattatacatgctttgaa-catgtaatttcacccacaatcataccataatcatcaattcatggacaagaaaacaacatca 3643  T
323 cagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||| |||||||| |||||| ||||||||||||||||||||||||||||| || |||||||||    
3644 cagtaagagcactaatttagcatcaattgttcatcaacccattttcata-aaacatgagaaa 3704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 81; Significance: 5e-38; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 227 - 375
Target Start/End: Original strand, 7345 - 7492
Alignment:
227 aatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagc 326  Q
    ||||||| | |||||||||||||||||| || || |||||||||||||||||||||||||||||||| |||||||||| | |||  || |||| || | |    
7345 aatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaattcatgtataag-caacagcaacataac 7443  T
327 aagagcacgaatttaacatcaattgttcatcaacccattttcatacaac 375  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||    
7444 aagagcacgaatttgacatgaattgttcatcaacccattttcatacaac 7492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 7210 - 7263
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacat 144  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
7210 catcatcaatccataattatgtatacccaagtcataattcactcacaacaacat 7263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 260 - 384
Target Start/End: Original strand, 3890 - 4013
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    |||||||||||||| | |||| ||||| || ||| |||||||||||||||||||||||||||||| |||||||||||||||| ||  |||||||||||||    
3890 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaagaattgttcatcaa 3989  T
360 cccattttcatacaaccatgagaaa 384  Q
    ||||||||||||||| |||||||||    
3990 cccattttcatacaa-catgagaaa 4013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 227 - 375
Target Start/End: Complemental strand, 23869 - 23722
Alignment:
227 aatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagc 326  Q
    ||||||| | |||||||||||||||||| || || |||||||||||||||||||||||||||||||| ||||| |||| | ||| ||| | || || | |    
23869 aatttcacaacttgacatttatacatacattgaaccatgtaatttcatccacaaacataccataatcatcaatccatgtataag-aaacaacaacataac 23771  T
327 aagagcacgaatttaacatcaattgttcatcaacccattttcatacaac 375  Q
     ||||||||||||| |||| | |||||||||||||||||||||||||||    
23770 cagagcacgaatttgacatgagttgttcatcaacccattttcatacaac 23722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 24004 - 23951
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacat 144  Q
    ||||||||||||||||||| ||| |||||||| ||||||||| |||||||||||    
24004 catcatcaatccataattaagtacacccaagttataattcactcacaacaacat 23951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 326 - 389
Target Start/End: Complemental strand, 12149 - 12086
Alignment:
326 caagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaatgaaa 389  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
12149 caagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaatgaaa 12086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 170 - 384
Target Start/End: Original strand, 3042 - 3253
Alignment:
170 aacatgaatcacatctcattttaacaacaacatatcaagattcactaattgaagtataattt-catagcttgacatttatacatactttaaaacatgtaa 268  Q
    ||||||||||| |||||| || ||||||||| || ||| |||||| |||||| | | ||||| || | ||| |||||| |||||| || ||  |||||||    
3042 aacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattga-gcacaattttcacaacttcacatttttacataattgaa--catgtaa 3138  T
269 tttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttc 368  Q
    ||||| | |||| ||||| || ||| |||||||||| | |  || ||| |||||||||||||||||||||||| ||  ||||||||||||||||||||||    
3139 tttcaccaacaatcatacaattatcatcaattcatggatacaaacataacatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttc 3238  T
369 atacaaccatgagaaa 384  Q
    |||||| |||||||||    
3239 atacaa-catgagaaa 3253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 259 - 371
Target Start/End: Original strand, 202 - 314
Alignment:
259 aaacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatca 358  Q
    ||||||||||||||| | |||| ||||| || ||| |||||||||||| |  || ||| ||||||||||||||||||||||| |||| ||||||||||||    
202 aaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatca 301  T
359 acccattttcata 371  Q
    |||||||||||||    
302 acccattttcata 314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 9433 - 9318
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    |||||||||||||| | |||| ||||| || ||| |||||||||||| |  || ||| ||||||||||| ||||||||||| |||| |||||||||||||    
9433 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagcaaaagcacgaatttgacatgaattgttcatcaa 9334  T
360 cccattttcatacaac 375  Q
    ||||||||||||||||    
9333 cccattttcatacaac 9318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 16331 - 16216
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    |||||||||||||| | |||| ||||| || ||| |||||||||||| |  || ||| ||||||||||| ||||||||||| |||| |||||||||||||    
16331 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagcaaaagcacgaatttgacatgaattgttcatcaa 16232  T
360 cccattttcatacaac 375  Q
    ||||||||||||||||    
16231 cccattttcatacaac 16216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 375
Target Start/End: Complemental strand, 1388 - 1273
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    |||||||||||||| | |||| ||||| |  | | |||||||||||| |  || ||| |||||||||||||||||||||||| ||| |||||||||||||    
1388 aacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaa 1289  T
360 cccattttcatacaac 375  Q
    ||||||||||||||||    
1288 cccattttcatacaac 1273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 91 - 350
Target Start/End: Original strand, 8849 - 9106
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    |||||||||| ||| | ||||||||||||||  || ||||| | |||||||||||| |||||||||||||  | ||| |||||| ||||| |||||| ||    
8849 catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaatagcaataacatcaattgaacattaatcatatctcaatt 8948  T
191 taacaacaacatatcaagattcactaattgaagtataa-tttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccat 289  Q
     ||||||||| || ||| |||||| ||||| || | || ||||| | ||| |||||| |||||| ||   |||||||||||||| | |||| ||||| ||    
8949 caacaacaacttagcaaaattcaccaattg-agcacaattttcacaacttcacatttttacataatt--gaacatgtaatttcaccaacaatcatacaat 9045  T
290 aatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaatt 350  Q
     ||| |||||||||||| |  || ||| ||||||||   ||||||||||||| || |||||    
9046 tatcatcaattcatgcatacaaacatatcatcacagatggagcacgaatttagcaacaatt 9106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 260 - 384
Target Start/End: Complemental strand, 13409 - 13286
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    |||||||||||||| | |||| ||||| || ||| |||||||||||| |  || ||| |||||||  |||||||||||| || ||| |||||||||||||    
13409 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacactaagagcacgaatctagcatgaattgttcatcaa 13310  T
360 cccattttcatacaaccatgagaaa 384  Q
    ||||||||||||||| |||||||||    
13309 cccattttcatacaa-catgagaaa 13286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 297 - 375
Target Start/End: Complemental strand, 64570 - 64492
Alignment:
297 aattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaac 375  Q
    |||||||||| |  || ||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
64570 aattcatgcatataaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaac 64492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 384
Target Start/End: Original strand, 107914 - 108037
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    |||||||||||||| | |||| ||||| || ||| |||||||||||| |  || ||| ||| ||||   |||||||||||||  | ||||||||||||||    
107914 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaattgttcatcaa 108013  T
360 cccattttcatacaaccatgagaaa 384  Q
    ||||||||||||||| |||||||||    
108014 cccattttcatacaa-catgagaaa 108037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 192 - 350
Target Start/End: Original strand, 3290 - 3447
Alignment:
192 aacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccataa 291  Q
    ||||||||| || ||| |||||| | |||| ||| ||||||||| ||||| ||||||||||||||| ||| ||||||||||| | |||| ||||| |  |    
3290 aacaacaacttagcaaaattcaccatttga-gtacaatttcataacttgatatttatacatactttgaaatatgtaatttcaccaacaatcatacaaata 3388  T
292 tcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaatt 350  Q
    || | |||||||||| |  ||  || ||||||||| |||||||||||||| ||||||||    
3389 tcattaattcatgcatacaaacttaacatcacagctagagcacgaatttagcatcaatt 3447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 384
Target Start/End: Complemental strand, 10778 - 10713
Alignment:
318 catcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||||||| |||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||    
10778 catcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaa-catgagaaa 10713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 318 - 384
Target Start/End: Complemental strand, 21142 - 21077
Alignment:
318 catcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 384  Q
    ||||||| |||||||||||||||| ||  |||||||||||||||||||||||||||| |||||||||    
21142 catcacaacaagagcacgaatttagcaagaattgttcatcaacccattttcatacaa-catgagaaa 21077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 260 - 384
Target Start/End: Complemental strand, 14145 - 14023
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaa 359  Q
    ||||||||||||||   |||| ||||  || ||| |||||||||||| |   | ||| ||||||||||||||||||| |||| ||  |||||| ||||||    
14145 aacatgtaatttcactaacaatcatataattatcatcaattcatgcatacagacataacatcacagcaagagcacga-tttagcaagaattgtgcatcaa 14047  T
360 cccattttcatacaaccatgagaaa 384  Q
    ||||||||||||||| |||||||||    
14046 cccattttcatacaa-catgagaaa 14023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 91 - 350
Target Start/End: Original strand, 41648 - 41905
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    |||||||||| ||| | |||| |||||||||  || ||||| | |||||||||||| |||| | ||| ||  | ||| |||||||  || ||||  | ||    
41648 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcatttaacaacaacaacatcaattgaacatggttctcatcataatt 41747  T
191 taacaacaacatatcaagattcactaattgaagtataatttcatagcttgacatttatacatactttaaaacatgtaatttcatccacaaacataccata 290  Q
     |||||||||||| ||| |||||| |||||||    | ||||| | ||| |||||| |||||| || ||  |||||||||||| | |||| ||||| ||     
41748 caacaacaacatagcaaaattcaccaattgaacacaattttcacaacttcacatttttacataattgaa--catgtaatttcaccaacaatcatacaatt 41845  T
291 atcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaatt 350  Q
    ||| |||||||||||| |  || ||| ||||||||  ||||||||||||||||| |||||    
41846 atcatcaattcatgcatacaaacataacatcacagttagagcacgaatttaacaacaatt 41905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 326 - 375
Target Start/End: Complemental strand, 31693 - 31644
Alignment:
326 caagagcacgaatttaacatcaattgttcatcaacccattttcatacaac 375  Q
    |||||||||||||||| ||| |||||||||||||| ||||||||||||||    
31693 caagagcacgaatttagcatgaattgttcatcaactcattttcatacaac 31644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 221
Target Start/End: Original strand, 19206 - 19336
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    |||||||||| ||| | |||| |||||||||  || ||||| | |||||||||||| |||| ||||||||  | ||| ||||| |||||| | |||| ||    
19206 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacaggaatcataactcaatt 19305  T
191 taacaacaacatatcaagattcactaattga 221  Q
     ||||||||| || ||| |||||| ||||||    
19306 caacaacaacttagcaaaattcaccaattga 19336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 221
Target Start/End: Original strand, 21290 - 21420
Alignment:
91 catcatcaatccataattatgtatacccaagtcataattcacccacaacaacatcagttaatagcaataatcttaatggaacatgaatcacatctcattt 190  Q
    |||||||||| ||| | |||| |||||||||  || ||||| | |||||||||||| |||| ||||||||  | ||| ||||| |||||| | |||| ||    
21290 catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacaggaatcataactcaatt 21389  T
191 taacaacaacatatcaagattcactaattga 221  Q
     ||||||||| || ||| |||||| ||||||    
21390 caacaacaacttagcaaaattcaccaattga 21420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 341
Target Start/End: Complemental strand, 34556 - 34475
Alignment:
260 aacatgtaatttcatccacaaacataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaattta 341  Q
    |||||||||||||| | |||| ||||| || ||| |||||||||||| |  || ||| ||||||||  ||||||||||||||    
34556 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaattta 34475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 146
Target Start/End: Complemental strand, 16090 - 16034
Alignment:
91 catcatcaatccat-aattatgtatacccaagtcataattcacccacaacaacatca 146  Q
    |||||||||| ||| ||||||| ||||||||||||||| ||||| ||||||| ||||    
16090 catcatcaattcatgaattatgaatacccaagtcataaatcaccaacaacaatatca 16034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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