View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0726-Insertion-4 (Length: 313)
Name: NF0726-Insertion-4
Description: NF0726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0726-Insertion-4 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 7 - 313
Target Start/End: Original strand, 21937094 - 21937400
Alignment:
| Q |
7 |
acttttgtgtgtaaacaatacgaacgcttgaagattgtgacatctaaatgggagcaatttctttttaacgattttaacgtttctacatgtctaaaactcg |
106 |
Q |
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| T |
21937094 |
acttttgtgtgtaaataatacgaacgcttgaagattgtgacacttaaatgggagcatattcttcttaacaattttaacgtttctacatgtttaaaattca |
21937193 |
T |
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| Q |
107 |
agtttgaatttaaaatctttgttaagttagaagagattagagtaagaaaaataatttttccacacaatacaacgtcaacatcatttatttagagcttgtt |
206 |
Q |
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| T |
21937194 |
agtttgaatttaaaatctttgttaagttataagagattagagtaaggaaaatattttttccacacaatacaacgtcaacatcatatatttagaggttgtt |
21937293 |
T |
|
| Q |
207 |
tgacaaagtcaattttcgaacttataacacatatttataactcataaaacaaaaatagatttatttgacttattagctcatatgtcccgtttcgcgtgtc |
306 |
Q |
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||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
21937294 |
tgagaaagttaattttcgagcttataacacatatttataactcataaaacaaaaatagatttatttgacttattagctcatatgtcccgtttcgtgtgtc |
21937393 |
T |
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| Q |
307 |
caaataa |
313 |
Q |
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||||||| |
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| T |
21937394 |
caaataa |
21937400 |
T |
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