View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0727_high_10 (Length: 437)
Name: NF0727_high_10
Description: NF0727
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0727_high_10 |
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Alignment Details
Target: chr2 (Bit Score: 347; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 8 - 406
Target Start/End: Original strand, 26711146 - 26711544
Alignment:
| Q |
8 |
cgaataatattaaaaaactagttccaccaaaacatgtgaaatgagtttcatcaaaagcattagaaacagtacttggacatcgattctctaaaagctctgt |
107 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
26711146 |
cgaataatattaaaaaactagtcccaccaaaacatgtgaaatgagtttcatcaaaagcattagagacagtacttggacatcgattctctaaaagctctgt |
26711245 |
T |
|
| Q |
108 |
gtatcgatttgccgcacacttttcaggtgaagcatattcctcagtgcaacaatgctttggctctctagtggtataacatggactcttgcaagcaattttt |
207 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
26711246 |
gtatcgatttggcgcacacttttcaggtgaagcatattcctcagtgcaacaatgctttggctctctagtggtataacatggactcttgcaagcaatcttt |
26711345 |
T |
|
| Q |
208 |
ctcccttcatcgctatacacacccaaccaatcaggacatcgatccaacaaattcatatcgcacataattttctggcatttggattctaaaggtgttaaag |
307 |
Q |
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||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||| | |
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| T |
26711346 |
ctcccttcatcgctatacacagccaaccaattaggacattgatccaacaaattcatatcgcacatgattttcttgcatttggattctaaaggggttaatg |
26711445 |
T |
|
| Q |
308 |
taacaggtaaactaaaaccatctttaaggtccactttataggaactactaccaccaccttttggaactaaattgagtttcacttgagtcgcaggtgggt |
406 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |
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| T |
26711446 |
taacaggtaaactaaaaccatctttaaggtccactttataggaactactaccaccaccttttggaactaaattgaatttcacttgagtcacaggtgggt |
26711544 |
T |
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