View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0727_high_2 (Length: 625)

Name: NF0727_high_2
Description: NF0727
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0727_high_2
NF0727_high_2
[»] chr8 (57 HSPs)
chr8 (353-598)||(38335998-38336243)
chr8 (34-313)||(38335714-38335986)
chr8 (76-238)||(32927920-32928083)
chr8 (136-236)||(16972019-16972119)
chr8 (132-238)||(35495018-35495124)
chr8 (87-187)||(10368044-10368145)
chr8 (118-238)||(26100082-26100203)
chr8 (98-238)||(4662823-4662960)
chr8 (136-236)||(32736492-32736592)
chr8 (158-238)||(37684433-37684513)
chr8 (138-238)||(32994197-32994299)
chr8 (180-238)||(13384653-13384711)
chr8 (75-224)||(18123268-18123418)
chr8 (247-333)||(42455834-42455920)
chr8 (130-191)||(3467560-3467621)
chr8 (136-238)||(32767415-32767519)
chr8 (155-224)||(38868785-38868854)
chr8 (160-237)||(40848046-40848123)
chr8 (95-194)||(9461452-9461551)
chr8 (158-209)||(32101130-32101181)
chr8 (250-333)||(35525334-35525417)
chr8 (160-238)||(6027028-6027106)
chr8 (136-178)||(15206736-15206778)
chr8 (86-237)||(18355753-18355904)
chr8 (130-176)||(22936814-22936860)
chr8 (247-353)||(26668454-26668560)
chr8 (130-176)||(43550933-43550979)
chr8 (291-356)||(32100972-32101037)
chr8 (130-174)||(4941802-4941846)
chr8 (165-225)||(5859047-5859107)
chr8 (247-307)||(5997360-5997420)
chr8 (158-238)||(7533826-7533905)
chr8 (415-481)||(30277254-30277317)
chr8 (135-175)||(31246341-31246381)
chr8 (67-174)||(36779435-36779543)
chr8 (176-238)||(15677810-15677873)
chr8 (130-180)||(440210-440260)
chr8 (130-176)||(28425493-28425539)
chr8 (137-238)||(30098938-30099037)
chr8 (155-233)||(35495293-35495371)
chr8 (130-176)||(40742166-40742212)
chr8 (134-176)||(41289083-41289125)
chr8 (390-441)||(11185256-11185304)
chr8 (291-356)||(15677919-15677984)
chr8 (415-448)||(25869275-25869308)
chr8 (130-175)||(26490976-26491021)
chr8 (415-448)||(28769348-28769381)
chr8 (130-191)||(42149032-42149093)
chr8 (136-176)||(1373081-1373121)
chr8 (168-236)||(8245394-8245462)
chr8 (130-166)||(9908813-9908849)
chr8 (247-307)||(11791811-11791871)
chr8 (136-227)||(18356044-18356133)
chr8 (137-189)||(32809784-32809836)
chr8 (268-356)||(32994322-32994410)
chr8 (135-191)||(42143390-42143446)
chr8 (158-194)||(43492214-43492250)
[»] chr7 (39 HSPs)
chr7 (71-247)||(40491597-40491774)
chr7 (136-238)||(45557393-45557495)
chr7 (136-238)||(12306749-12306853)
chr7 (136-227)||(38123621-38123712)
chr7 (136-360)||(27571757-27571992)
chr7 (136-236)||(25156230-25156330)
chr7 (137-227)||(40561714-40561804)
chr7 (160-217)||(9480588-9480645)
chr7 (136-307)||(40795944-40796113)
chr7 (71-187)||(42481779-42481896)
chr7 (130-222)||(17111889-17111981)
chr7 (162-238)||(32683589-32683665)
chr7 (130-178)||(38230121-38230169)
chr7 (158-237)||(42816445-42816524)
chr7 (159-237)||(22195893-22195971)
chr7 (130-176)||(48459765-48459811)
chr7 (244-289)||(23441304-23441349)
chr7 (265-358)||(45004882-45004975)
chr7 (140-188)||(33853443-33853491)
chr7 (135-191)||(37562610-37562666)
chr7 (135-175)||(42752204-42752244)
chr7 (130-176)||(3622468-3622514)
chr7 (130-176)||(3750741-3750787)
chr7 (130-176)||(10371966-10372012)
chr7 (130-176)||(39391145-39391191)
chr7 (130-176)||(44967407-44967453)
chr7 (130-176)||(47021974-47022020)
chr7 (118-186)||(1442651-1442720)
chr7 (37-66)||(3019902-3019931)
chr7 (130-191)||(3375530-3375591)
chr7 (96-180)||(15311189-15311274)
chr7 (244-273)||(23458041-23458070)
chr7 (177-238)||(41386811-41386872)
chr7 (259-307)||(12306925-12306973)
chr7 (161-221)||(24109504-24109564)
chr7 (158-210)||(32295240-32295292)
chr7 (130-178)||(33746442-33746490)
chr7 (130-174)||(39634173-39634217)
chr7 (247-307)||(41386892-41386952)
[»] chr4 (71 HSPs)
chr4 (158-356)||(35064962-35065171)
chr4 (163-238)||(32818352-32818427)
chr4 (158-238)||(21691189-21691269)
chr4 (254-352)||(46344915-46345013)
chr4 (149-238)||(8604590-8604679)
chr4 (247-356)||(41058825-41058934)
chr4 (136-233)||(47144247-47144344)
chr4 (95-243)||(4243410-4243560)
chr4 (262-356)||(49138927-49139021)
chr4 (95-207)||(43868195-43868308)
chr4 (161-238)||(45011902-45011979)
chr4 (88-191)||(22250301-22250405)
chr4 (167-238)||(10185222-10185293)
chr4 (162-237)||(45694643-45694718)
chr4 (250-356)||(2635062-2635168)
chr4 (158-227)||(16551996-16552063)
chr4 (130-236)||(41751221-41751327)
chr4 (254-307)||(22683811-22683864)
chr4 (158-227)||(26911784-26911853)
chr4 (251-356)||(54705472-54705577)
chr4 (130-191)||(56241856-56241917)
chr4 (268-356)||(21691318-21691406)
chr4 (158-238)||(43385363-43385443)
chr4 (130-177)||(16492945-16492992)
chr4 (132-224)||(29114755-29114853)
chr4 (136-194)||(1023873-1023931)
chr4 (130-176)||(16566324-16566370)
chr4 (137-191)||(29149335-29149389)
chr4 (130-176)||(39636804-39636850)
chr4 (250-332)||(53913657-53913739)
chr4 (137-191)||(54487248-54487302)
chr4 (130-191)||(13167529-13167590)
chr4 (247-356)||(43868035-43868144)
chr4 (296-356)||(33456273-33456333)
chr4 (247-283)||(38498235-38498271)
chr4 (158-238)||(55927747-55927827)
chr4 (252-335)||(26617709-26617792)
chr4 (161-236)||(34759468-34759542)
chr4 (161-238)||(37566204-37566278)
chr4 (94-176)||(38740286-38740369)
chr4 (130-176)||(6138641-6138687)
chr4 (121-187)||(7223104-7223170)
chr4 (130-176)||(19592252-19592298)
chr4 (130-176)||(25312734-25312780)
chr4 (130-176)||(26651869-26651915)
chr4 (136-194)||(33843783-33843841)
chr4 (124-238)||(46344778-46344889)
chr4 (130-176)||(46830090-46830136)
chr4 (130-176)||(51922959-51923005)
chr4 (160-194)||(53713540-53713574)
chr4 (130-176)||(54150545-54150591)
chr4 (161-238)||(1616418-1616495)
chr4 (137-194)||(2206598-2206655)
chr4 (415-448)||(7694019-7694052)
chr4 (197-238)||(30357540-30357581)
chr4 (197-238)||(42971918-42971959)
chr4 (130-191)||(46926052-46926113)
chr4 (132-224)||(7497620-7497711)
chr4 (136-184)||(20712769-20712817)
chr4 (135-207)||(22683923-22683995)
chr4 (247-307)||(25318995-25319055)
chr4 (247-307)||(33560648-33560708)
chr4 (130-170)||(33574203-33574243)
chr4 (416-448)||(35743310-35743342)
chr4 (130-174)||(36150625-36150669)
chr4 (135-175)||(38306031-38306071)
chr4 (130-174)||(42944919-42944963)
chr4 (155-231)||(47314975-47315051)
chr4 (130-174)||(48550448-48550492)
chr4 (135-191)||(49136526-49136582)
chr4 (135-175)||(54488625-54488665)
[»] chr3 (41 HSPs)
chr3 (74-238)||(32523226-32523397)
chr3 (142-238)||(41596110-41596206)
chr3 (136-238)||(31708194-31708296)
chr3 (158-236)||(33791982-33792061)
chr3 (91-227)||(31013057-31013194)
chr3 (90-238)||(35264319-35264468)
chr3 (174-237)||(4526161-4526224)
chr3 (139-238)||(46853492-46853591)
chr3 (130-176)||(31084241-31084287)
chr3 (136-238)||(51285598-51285700)
chr3 (130-187)||(49526690-49526747)
chr3 (139-207)||(7262873-7262941)
chr3 (136-191)||(1441362-1441417)
chr3 (136-227)||(35253422-35253513)
chr3 (249-356)||(48410891-48410998)
chr3 (136-238)||(3776550-3776652)
chr3 (137-191)||(26519683-26519737)
chr3 (136-238)||(37334989-37335091)
chr3 (130-176)||(50664792-50664838)
chr3 (130-175)||(23496352-23496397)
chr3 (130-178)||(34561140-34561188)
chr3 (135-227)||(42484454-42484545)
chr3 (140-234)||(1290758-1290853)
chr3 (94-176)||(31766159-31766242)
chr3 (169-236)||(36302213-36302280)
chr3 (310-356)||(1290680-1290726)
chr3 (158-224)||(25359551-25359617)
chr3 (172-230)||(29305922-29305980)
chr3 (130-176)||(30811553-30811598)
chr3 (130-176)||(35425368-35425413)
chr3 (144-225)||(584756-584837)
chr3 (130-191)||(4984600-4984661)
chr3 (389-448)||(9279312-9279368)
chr3 (384-443)||(37273167-37273223)
chr3 (136-189)||(41591308-41591361)
chr3 (136-192)||(14022047-14022103)
chr3 (416-448)||(26542565-26542597)
chr3 (415-443)||(29771871-29771899)
chr3 (130-174)||(38340841-38340885)
chr3 (130-178)||(44939437-44939484)
chr3 (185-237)||(50550603-50550655)
[»] chr1 (58 HSPs)
chr1 (71-238)||(7524141-7524309)
chr1 (160-356)||(28083867-28084074)
chr1 (160-236)||(3416110-3416186)
chr1 (152-238)||(1514371-1514458)
chr1 (158-236)||(30557534-30557610)
chr1 (136-238)||(34915094-34915196)
chr1 (71-178)||(3515895-3516003)
chr1 (250-307)||(646128-646185)
chr1 (165-238)||(3016190-3016263)
chr1 (158-231)||(6283225-6283298)
chr1 (169-238)||(11049278-11049347)
chr1 (139-238)||(27849167-27849267)
chr1 (158-236)||(32370008-32370086)
chr1 (136-194)||(35961440-35961498)
chr1 (149-238)||(10324906-10324995)
chr1 (175-236)||(30850393-30850454)
chr1 (166-238)||(213522-213594)
chr1 (95-234)||(11817230-11817369)
chr1 (160-223)||(52263626-52263689)
chr1 (130-176)||(1199885-1199931)
chr1 (136-194)||(5268291-5268349)
chr1 (130-176)||(20800299-20800345)
chr1 (130-176)||(35569224-35569270)
chr1 (167-205)||(47053465-47053503)
chr1 (130-176)||(48510966-48511012)
chr1 (142-238)||(48548975-48549069)
chr1 (158-207)||(49216784-49216833)
chr1 (71-194)||(213170-213294)
chr1 (158-226)||(38797607-38797674)
chr1 (250-318)||(49824826-49824894)
chr1 (142-221)||(1233350-1233429)
chr1 (158-236)||(2099664-2099743)
chr1 (150-238)||(6021832-6021916)
chr1 (158-299)||(34721817-34721966)
chr1 (414-448)||(11893601-11893635)
chr1 (310-356)||(15084733-15084779)
chr1 (136-190)||(15515024-15515078)
chr1 (130-176)||(15884285-15884331)
chr1 (247-329)||(24587835-24587917)
chr1 (130-176)||(31223432-31223478)
chr1 (130-176)||(40229492-40229538)
chr1 (130-176)||(42850241-42850287)
chr1 (130-176)||(47123444-47123490)
chr1 (247-288)||(6932262-6932303)
chr1 (415-448)||(11211146-11211179)
chr1 (247-332)||(15477826-15477911)
chr1 (291-356)||(30557415-30557480)
chr1 (415-448)||(33108631-33108664)
chr1 (415-448)||(35925718-35925751)
chr1 (130-175)||(43730066-43730111)
chr1 (259-356)||(44801387-44801483)
chr1 (160-236)||(3909891-3909967)
chr1 (182-238)||(28287337-28287393)
chr1 (135-183)||(33693085-33693133)
chr1 (34-66)||(34405029-34405061)
chr1 (135-191)||(44786872-44786928)
chr1 (176-236)||(47321902-47321962)
chr1 (158-230)||(47411682-47411754)
[»] chr2 (51 HSPs)
chr2 (136-217)||(16518827-16518908)
chr2 (86-235)||(11759763-11759913)
chr2 (136-275)||(33502227-33502364)
chr2 (158-238)||(33019133-33019213)
chr2 (158-238)||(22536026-22536106)
chr2 (130-187)||(3853932-3853989)
chr2 (158-238)||(42741005-42741084)
chr2 (167-238)||(42982572-42982643)
chr2 (142-358)||(680251-680471)
chr2 (158-236)||(11504039-11504116)
chr2 (158-236)||(13912817-13912895)
chr2 (130-176)||(34433325-34433371)
chr2 (137-194)||(15220817-15220874)
chr2 (158-238)||(43501153-43501231)
chr2 (139-244)||(44439276-44439381)
chr2 (142-218)||(1976825-1976901)
chr2 (158-238)||(33047559-33047639)
chr2 (247-331)||(33502926-33503010)
chr2 (130-174)||(42089547-42089591)
chr2 (268-331)||(15928532-15928595)
chr2 (162-237)||(32596020-32596095)
chr2 (130-176)||(1945058-1945104)
chr2 (137-191)||(2213534-2213588)
chr2 (137-191)||(28127313-28127367)
chr2 (136-229)||(36893443-36893536)
chr2 (135-191)||(9988525-9988581)
chr2 (247-355)||(30503109-30503217)
chr2 (249-301)||(32777924-32777976)
chr2 (247-330)||(10644529-10644611)
chr2 (415-446)||(32615951-32615982)
chr2 (130-176)||(2215295-2215341)
chr2 (144-238)||(4894120-4894214)
chr2 (132-178)||(7632545-7632591)
chr2 (247-297)||(11510911-11510961)
chr2 (130-176)||(25747901-25747946)
chr2 (424-466)||(29419871-29419913)
chr2 (130-176)||(30007572-30007618)
chr2 (136-194)||(40401598-40401656)
chr2 (416-450)||(41032965-41032999)
chr2 (130-191)||(2213675-2213736)
chr2 (415-448)||(3611365-3611398)
chr2 (262-307)||(4908737-4908782)
chr2 (130-191)||(7296183-7296244)
chr2 (160-209)||(8800677-8800726)
chr2 (415-448)||(16867767-16867800)
chr2 (130-191)||(27911434-27911495)
chr2 (130-175)||(30599923-30599968)
chr2 (92-207)||(37283314-37283431)
chr2 (185-237)||(31453412-31453464)
chr2 (247-307)||(36987189-36987249)
chr2 (247-283)||(44505898-44505934)
[»] chr6 (53 HSPs)
chr6 (136-238)||(434192-434294)
chr6 (158-357)||(25195343-25195551)
chr6 (158-356)||(4910807-4911016)
chr6 (91-356)||(5724541-5724816)
chr6 (135-224)||(882728-882817)
chr6 (158-235)||(3482077-3482154)
chr6 (136-358)||(1485101-1485335)
chr6 (92-210)||(8856363-8856482)
chr6 (158-238)||(17225880-17225960)
chr6 (142-238)||(34620914-34621010)
chr6 (142-238)||(34748351-34748447)
chr6 (136-238)||(34910975-34911072)
chr6 (247-352)||(7952786-7952891)
chr6 (132-332)||(26280528-26280738)
chr6 (137-236)||(8854950-8855048)
chr6 (136-243)||(31305802-31305909)
chr6 (158-237)||(6653843-6653924)
chr6 (161-238)||(25195878-25195953)
chr6 (161-238)||(16540135-16540212)
chr6 (91-194)||(46197-46301)
chr6 (138-210)||(3289801-3289872)
chr6 (167-235)||(25388108-25388175)
chr6 (166-233)||(852565-852632)
chr6 (158-220)||(957600-957662)
chr6 (88-193)||(1499973-1500079)
chr6 (160-226)||(8860544-8860610)
chr6 (130-176)||(16548173-16548219)
chr6 (136-238)||(34027372-34027474)
chr6 (415-448)||(17241261-17241294)
chr6 (130-191)||(33899026-33899087)
chr6 (136-238)||(2234543-2234644)
chr6 (132-192)||(3798974-3799034)
chr6 (384-442)||(5566158-5566213)
chr6 (268-356)||(6896030-6896118)
chr6 (139-191)||(16442380-16442432)
chr6 (128-176)||(21254898-21254945)
chr6 (255-330)||(2008423-2008498)
chr6 (130-176)||(6208084-6208129)
chr6 (136-206)||(25195132-25195201)
chr6 (130-176)||(29409272-29409318)
chr6 (170-238)||(947595-947661)
chr6 (142-236)||(2748024-2748118)
chr6 (417-458)||(7931800-7931841)
chr6 (130-191)||(10826110-10826171)
chr6 (166-231)||(24982328-24982393)
chr6 (135-188)||(33997274-33997327)
chr6 (130-178)||(1312460-1312508)
chr6 (415-443)||(2160946-2160974)
chr6 (135-191)||(7486505-7486561)
chr6 (134-190)||(25208702-25208758)
chr6 (136-184)||(29240407-29240455)
chr6 (415-443)||(31583712-31583740)
chr6 (247-307)||(35098535-35098595)
[»] scaffold0168 (2 HSPs)
scaffold0168 (250-356)||(31725-31831)
scaffold0168 (161-238)||(31854-31934)
[»] scaffold0361 (1 HSPs)
scaffold0361 (142-238)||(14075-14171)
[»] chr5 (40 HSPs)
chr5 (247-356)||(5468673-5468781)
chr5 (161-238)||(18851062-18851139)
chr5 (158-236)||(38845473-38845552)
chr5 (158-244)||(42858130-42858216)
chr5 (139-224)||(10898763-10898847)
chr5 (174-237)||(28110431-28110494)
chr5 (136-238)||(6951260-6951362)
chr5 (71-208)||(117387-117523)
chr5 (158-237)||(35108268-35108347)
chr5 (137-191)||(3667887-3667941)
chr5 (130-176)||(22482237-22482283)
chr5 (136-238)||(35073393-35073495)
chr5 (169-234)||(4909789-4909854)
chr5 (415-448)||(29590638-29590671)
chr5 (130-191)||(39987985-39988046)
chr5 (175-238)||(9818762-9818826)
chr5 (85-176)||(14299416-14299508)
chr5 (136-238)||(18637312-18637413)
chr5 (136-224)||(27374249-27374337)
chr5 (98-181)||(29922985-29923069)
chr5 (133-237)||(31906288-31906392)
chr5 (130-194)||(40885241-40885305)
chr5 (135-174)||(2483737-2483776)
chr5 (137-176)||(35760237-35760276)
chr5 (130-176)||(4292197-4292243)
chr5 (160-194)||(11577600-11577634)
chr5 (136-194)||(14671097-14671154)
chr5 (172-238)||(22226227-22226293)
chr5 (138-208)||(37877116-37877186)
chr5 (310-356)||(38845651-38845697)
chr5 (130-176)||(41834940-41834986)
chr5 (142-187)||(4306591-4306636)
chr5 (130-191)||(8049069-8049130)
chr5 (130-191)||(13253101-13253161)
chr5 (415-448)||(33533548-33533581)
chr5 (155-227)||(8591520-8591592)
chr5 (71-115)||(9818872-9818916)
chr5 (164-236)||(28031157-28031228)
chr5 (136-208)||(35138978-35139050)
chr5 (247-307)||(43012685-43012745)
[»] scaffold0314 (1 HSPs)
scaffold0314 (291-356)||(17325-17390)
[»] scaffold0286 (1 HSPs)
scaffold0286 (415-443)||(16143-16171)


Alignment Details
Target: chr8 (Bit Score: 230; Significance: 1e-126; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 353 - 598
Target Start/End: Original strand, 38335998 - 38336243
Alignment:
Q  353 caaatacattgatataatcaattttcagaatagctaatggaaacagcttataacatgtagtacataagttgttttcaacttatttccataaactctatgg 452  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38335998 caaatacattgatataatcacttttcagaatagctgatggaaacagcttataacatgtagtacataagttgttttcaacttatttccataaactctatgg 38336097  T
Q  453 gatagcaaatgaaaccaacagcttatatagcttatgataaatacaatgcgaataacaacataactcaccgttattgacattgatgtcagcattatgagaa 552  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38336098 gatagcaaatgaaactaacagcttatatagcttatgataaatacaatgcgaataacaacataactcaccgttattgacattgatgtcagcattatgagaa 38336197  T
Q  553 tcatttttgggagaaattagttgagattctttgtgagtggttgatg 598  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  38336198 tcatttttgggagaaattagttgagattcttcgtgagtggttgatg 38336243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 34 - 313
Target Start/End: Original strand, 38335714 - 38335986
Alignment:
Q  34 atgtttgattgacttatttgagcttatctactatgtatatgtttggtccttcggtgacaagaattgattttgagttaattgacaatgtaaaattaatttg 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38335714 atgtttgattgacttatttgagcttatctactatgtatatgtttggttcttcggtgacaagaattgattttgagttaattgacaatgtaaaattaatttg 38335813  T
Q  134 attaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatca 233  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38335814 attaaaagtgagttgaaggtgaattgatttgtgttcggatacattcatgtaaaagtgagttagaatataaatttgtgcgtaaaaatcaattctaaaatca 38335913  T
Q  234 aaagcaccaaaact-agaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatcta 313  Q
    |||||| |||| || ||  |||| |     ||   |||||||||||||| ||||||||||||||||||| ||||| |||||    
T  38335914 aaagcaacaaatcttagcttcaact-----gg---aatcaattatactcgaaaacaaacaaacatgtcagaatcaaatcta 38335986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 76 - 238
Target Start/End: Complemental strand, 32928083 - 32927920
Alignment:
Q  76 ttggtccttcggtgacaagaattgattttgagttaattgacaatgtaaaattaatt-tgattaaaagtgagttgaaggtgaattgatttgtgtttggata 174  Q
    ||||| || |||| |||| |||||||||||||  ||||||  |||||||||| ||| | | ||||| |||||||||||  || |||||||||||||||||    
T  32928083 ttggttctgcggtaacaataattgattttgagggaattgattatgtaaaattgattcttactaaaattgagttgaaggcaaagtgatttgtgtttggata 32927984  T
Q  175 cattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    ||||||||||||||||||||  |||||||||||||| |||||||| ||||||| ||||||||||    
T  32927983 cattcatgtaaaagtgagttgaactataaatttgtgtgtaaaaatgaattctataatcaaaagc 32927920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 136 - 236
Target Start/End: Original strand, 16972019 - 16972119
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaa 235  Q
    |||||||||||||||||| || ||||||||||||| |||||||||||||||||||| ||  || |||||||||||  ||||||||||||||||||| |||    
T  16972019 taaaagtgagttgaaggtaaaatgatttgtgtttgaatacattcatgtaaaagtgatttgaacaataaatttgtgtttaaaaatcaattctaaaattaaa 16972118  T
Q  236 a 236  Q
    |    
T  16972119 a 16972119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 132 - 238
Target Start/End: Complemental strand, 35495124 - 35495018
Alignment:
Q  132 tgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaat 231  Q
    |||||||||||| ||||||  | || ||||||||||||||||| |||||||||||||| ||||  |||||| ||||||| ||||||| |||||||| |||    
T  35495124 tgattaaaagtgggttgaatataaagtgatttgtgtttggatatattcatgtaaaagtaagttgaactatagatttgtgtgtaaaaaacaattctagaat 35495025  T
Q  232 caaaagc 238  Q
    |||||||    
T  35495024 caaaagc 35495018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 10368145 - 10368044
Alignment:
Q  87 gtgacaagaattgattttgagttaattgacaatgtaaaattaattt-gattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaa 185  Q
    |||| ||||||||||||||||| |||||    ||||||||| |||| || |||||||||||||||||| || |||||||||||| |||||||||||||||    
T  10368145 gtgataagaattgattttgagtgaattgtttttgtaaaattgattttgagtaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaa 10368046  T
Q  186 aa 187  Q
    ||    
T  10368045 aa 10368044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 118 - 238
Target Start/End: Original strand, 26100082 - 26100203
Alignment:
Q  118 atgtaaaattaatt-tgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaa 216  Q
    |||||||||| ||| ||| |||||  ||||||||||| ||   |||||||||||||| |||| |||||||||||||||  || ||||||||||| |||||    
T  26100082 atgtaaaattgattctgactaaaaacgagttgaaggtaaagctatttgtgtttggatgcatttatgtaaaagtgagttgaaccataaatttgtgtgtaaa 26100181  T
Q  217 aatcaattctaaaatcaaaagc 238  Q
    |||||||| || ||||||||||    
T  26100182 aatcaattatagaatcaaaagc 26100203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 98 - 238
Target Start/End: Original strand, 4662823 - 4662960
Alignment:
Q  98 tgattttgagttaattgacaatgtaaaattaatt-tgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttag 196  Q
    ||||||||||| ||||||  |||||||||| ||| ||| ||||| |||||| || ||     |||||||||||||||||||||| | ||||| |||||      
T  4662823 tgattttgagtgaattgattatgtaaaattgattctgactaaaactgagttaaatgta----gatttgtgtttggatacattcacggaaaagcgagttga 4662918  T
Q  197 actataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    |||||| ||||||| |||||||||||||||| || |||||||    
T  4662919 actatacatttgtgtgtaaaaatcaattctagaaacaaaagc 4662960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 136 - 236
Target Start/End: Complemental strand, 32736592 - 32736492
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaa 235  Q
    |||||||||||  ||||| || | |||||| |||| |||||||||||||||||||| ||  |||||||||||||| |||||||| |||| |||||| |||    
T  32736592 taaaagtgagtcaaaggtaaaataatttgtatttgaatacattcatgtaaaagtgaattgaactataaatttgtgtgtaaaaattaattttaaaataaaa 32736493  T
Q  236 a 236  Q
    |    
T  32736492 a 32736492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 37684513 - 37684433
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    ||||||||||||||||||||| |||||||||||||||  | ||||||||| ||| | |||||||||| || ||||||||||    
T  37684513 tgatttgtgtttggatacatttatgtaaaagtgagttgaattataaatttttgcattaaaatcaattttagaatcaaaagc 37684433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 238
Target Start/End: Original strand, 32994197 - 32994299
Alignment:
Q  138 aaagtgagttgaaggtgaa--ttgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaa 235  Q
    |||||||||||||||| ||  ||||||| ||||||||  ||||||||||||||| | ||  ||||||||||||||  ||||||||||||||| | |||||    
T  32994197 aaagtgagttgaaggtaaaatttgatttatgtttggactcattcatgtaaaagtcatttgcactataaatttgtgtataaaaatcaattctagactcaaa 32994296  T
Q  236 agc 238  Q
    |||    
T  32994297 agc 32994299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 13384653 - 13384711
Alignment:
Q  180 atgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    |||||||||||||||  |||||||||||||| || ||||||||||||| ||||||||||    
T  13384653 atgtaaaagtgagttgaactataaatttgtgtgtgaaaatcaattctagaatcaaaagc 13384711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 75 - 224
Target Start/End: Complemental strand, 18123418 - 18123268
Alignment:
Q  75 tttggtccttcggtgacaagaattgattttgagttaattgacaatgtaaaattaatt-tgattaaaagtgagttgaaggtgaattgatttgtgtttggat 173  Q
    |||||| ||| | ||| |||||||||||| |||| ||||||  |||||||||  | | | | ||||||||| |||||||| || ||||||||||| | ||    
T  18123418 tttggttctttgttgataagaattgatttagagtgaattgatgatgtaaaatcgactctaactaaaagtgaattgaaggtaaaatgatttgtgttggaat 18123319  T
Q  174 acattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaatt 224  Q
    | ||| |||||||||||||||  ||||||| |||   ||||||||||||||    
T  18123318 atatttatgtaaaagtgagttgaactataactttaaacgtaaaaatcaatt 18123268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 247 - 333
Target Start/End: Complemental strand, 42455920 - 42455834
Alignment:
Q  247 tagaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaatttta 333  Q
    |||||||||||||||||||| |||||||  ||||||||| ||| ||||||||||| |||||  |||||  || || |||||||||||    
T  42455920 tagaatcaattatggaggcagaatcaatcctactcaaaagcaaccaaacatgtcaaaatcaattctactgctccataatcaatttta 42455834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 3467621 - 3467560
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtga 191  Q
    |||| |||||||||||||||| |||||||||||| |||||||||| ||| || |||||||||    
T  3467621 tttggttaaaagtgagttgaatgtgaattgatttctgtttggatatatttatttaaaagtga 3467560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 32767519 - 32767415
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattca--tgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatca 233  Q
    ||||||||||||| | || ||||||||| ||||||||||||||||  ||||||||||||||  || ||||||||  | |||||| ||| ||||  |||||    
T  32767519 taaaagtgagttggatgtaaattgatttatgtttggatacattcatgtgtaaaagtgagttgaacaataaatttaagtgtaaaagtcagttctcgaatca 32767420  T
Q  234 aaagc 238  Q
    |||||    
T  32767419 aaagc 32767415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 155 - 224
Target Start/End: Complemental strand, 38868854 - 38868785
Alignment:
Q  155 aattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaatt 224  Q
    ||||||||| | |||| |||| |||||||||||||||||   ||||||||||||||||| ||||||||||    
T  38868854 aattgatttatatttgaatacgttcatgtaaaagtgagtagaactataaatttgtgcgtgaaaatcaatt 38868785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 160 - 237
Target Start/End: Complemental strand, 40848123 - 40848046
Alignment:
Q  160 atttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaag 237  Q
    ||||||||||| ||| |||||| ||||| ||||||  | ||||| |||||| || |||||||||||||||||||||||    
T  40848123 atttgtgtttgaatatattcatataaaaatgagtttaattataagtttgtgtgtgaaaatcaattctaaaatcaaaag 40848046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 95 - 194
Target Start/End: Original strand, 9461452 - 9461551
Alignment:
Q  95 aattgattttgagttaattgacaatgtaaaattaatt-tgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagt 193  Q
    |||||||||||||||||||||  || ||||||| ||| ||| ||||| ||| ||| |  | || |||||||||||||||||||||||| |||||||||||    
T  9461452 aattgattttgagttaattgattatttaaaattgattctgactaaaa-tgaattgcaactaaagtgatttgtgtttggatacattcatataaaagtgagt 9461550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 32101181 - 32101130
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgt 209  Q
    |||||||||| |||||||||| |||||||||||||||  |||||||||||||    
T  32101181 tgatttgtgtgtggatacatttatgtaaaagtgagttgaactataaatttgt 32101130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 250 - 333
Target Start/End: Complemental strand, 35525417 - 35525334
Alignment:
Q  250 aatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaatttta 333  Q
    |||||||| ||| || | |||||||| ||||| | ||||| ||||||||||| ||| | |||||||| ||||||||||||||||    
T  35525417 aatcaattctggtggtagaatcaattctactcgacaacaatcaaacatgtcagaattaaatctacacattcagaatcaatttta 35525334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 6027028 - 6027106
Alignment:
Q  160 atttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    |||||||||||  ||||| ||||||||| ||||||| ||| |||||||||   | ||||||||||||| ||||||||||    
T  6027028 atttgtgtttgagtacatccatgtaaaaatgagttaaactgtaaatttgtatatgaaaatcaattctagaatcaaaagc 6027106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 178
Target Start/End: Complemental strand, 15206778 - 15206736
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacatt 178  Q
    ||||||||||||||| |||||||||||| ||||||||||||||    
T  15206778 taaaagtgagttgaatgtgaattgatttatgtttggatacatt 15206736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 237
Target Start/End: Original strand, 18355753 - 18355904
Alignment:
Q  86 ggtgacaagaattgattttgagttaattgacaatgtaaaattaatt-tgattaaaagtgagttgaaggtgaat-tgatttgtgtttggatacattcatgt 183  Q
    ||||| || |||||||||||||| ||||||   ||||||||| ||| ||||||||||||  ||| || | ||  |||||| | ||||||||||||  |||    
T  18355753 ggtgataaaaattgattttgagtgaattgattttgtaaaattgattatgattaaaagtggcttggagataaaagtgatttatatttggatacatttgtgt 18355852  T
Q  184 aaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaag 237  Q
    ||||| |||||  ||| |||||||||  ||||||||||||| || |||||||||    
T  18355853 aaaagggagttgaactttaaatttgt--gtaaaaatcaattttagaatcaaaag 18355904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 22936814 - 22936860
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||||||||||| |||||||||||| ||||||||||||    
T  22936814 tttggttaaaagtgagttgaatgtgaattgatttatgtttggataca 22936860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 353
Target Start/End: Complemental strand, 26668560 - 26668454
Alignment:
Q  247 tagaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaattttagcccctctagaag 346  Q
    |||||||||||||||||||| |||||||| ||||| | || || ||||||||| | |||||  |||||| || |||||| |||    |||||||||||||    
T  26668560 tagaatcaattatggaggcagaatcaattctactcgacaagaatcaaacatgttagaatcaattctacatctccagaattaataacggcccctctagaag 26668461  T
Q  347 tggaacc 353  Q
    | |||||    
T  26668460 ttgaacc 26668454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 43550979 - 43550933
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||||||||||| |||||||||||| ||||||||||||    
T  43550979 tttggttaaaagtgagttgaatgtgaattgatttatgtttggataca 43550933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 291 - 356
Target Start/End: Complemental strand, 32101037 - 32100972
Alignment:
Q  291 caaacatgtcacaatcagatctacaccttcagaatcaattttagcccctctagaagtggaaccaaa 356  Q
    ||||||||||| |||||  ||||||| ||||||||||| | ||| ||||||| |||||||||||||    
T  32101037 caaacatgtcagaatcaattctacacattcagaatcaactctagtccctctaaaagtggaaccaaa 32100972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 4941802 - 4941846
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggata 174  Q
    ||||||||||||||||||  |||||||||||||| ||||||||||    
T  4941802 tttgattaaaagtgagtttgaggtgaattgatttatgtttggata 4941846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 5859047 - 5859107
Alignment:
Q  165 tgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattc 225  Q
    |||||| || ||||||||||||||||||||  || ||||| ||||| ||||||||||||||    
T  5859047 tgtttgaatgcattcatgtaaaagtgagttgaaccataaaattgtgtgtaaaaatcaattc 5859107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 247 - 307
Target Start/End: Original strand, 5997360 - 5997420
Alignment:
Q  247 tagaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatca 307  Q
    |||||||| || | ||||||||||||||| ||||||||||||  ||||||||||| |||||    
T  5997360 tagaatcacttttagaggcaaaatcaattttactcaaaaacatccaaacatgtcaaaatca 5997420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 7533905 - 7533826
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    |||| ||||||||| ||||||||| ||||||||||||| | ||||| || ||  ||||||||||||| || ||||||||||    
T  7533905 tgatctgtgtttgggtacattcatataaaagtgagtta-attataagttcgtatgtaaaaatcaattttagaatcaaaagc 7533826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 415 - 481
Target Start/End: Original strand, 30277254 - 30277317
Alignment:
Q  415 cataagttgttttcaacttatttccataaactctatgggatagcaaatgaaaccaacagcttatata 481  Q
    ||||||||||||||| |||||||||||||||||| | |||||||  |||||   |||||||||||||    
T  30277254 cataagttgttttcagcttatttccataaactctctaggatagcttatgaa---aacagcttatata 30277317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 175
Target Start/End: Original strand, 31246341 - 31246381
Alignment:
Q  135 ttaaaagtgagttgaaggtgaattgatttgtgtttggatac 175  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  31246341 ttaaaagtgagttgaatgtgaattgatttatgtttggatac 31246381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 67 - 174
Target Start/End: Complemental strand, 36779543 - 36779435
Alignment:
Q  67 tgtatatgtttggtccttcggtgacaagaattgattttgagttaattgacaatgtaaaattaattt-gattaaaagtgagttgaaggtgaattgatttgt 165  Q
    ||||| ||||||||  | ||||||| ||||||||||||||  |||||||   |||| |||| |||| |||||||||||||||||| || || | |||| |    
T  36779543 tgtatgtgtttggttgtgcggtgacgagaattgattttgatataattgattttgtagaattgattttgattaaaagtgagttgaatgtaaagtaatttat 36779444  T
Q  166 gtttggata 174  Q
    |||||||||    
T  36779443 gtttggata 36779435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 238
Target Start/End: Original strand, 15677810 - 15677873
Alignment:
Q  176 attcatgtaaaagtgagttagactataaatttgtgcgt-aaaaatcaattctaaaatcaaaagc 238  Q
    |||||||||| | ||||||  |||||||||||||| || |||||||||||||| ||||||||||    
T  15677810 attcatgtaacaatgagttgaactataaatttgtgtgtaaaaaatcaattctataatcaaaagc 15677873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 440210 - 440260
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattca 180  Q
    |||| ||||| |||||||| | |||||||||||| ||||||||||||||||    
T  440210 tttggttaaatgtgagttggatgtgaattgatttatgtttggatacattca 440260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 28425493 - 28425539
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||||||||  |||||||||||||| ||||||||||||    
T  28425493 tttggttaaaagtgagtttgaggtgaattgatttatgtttggataca 28425539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 137 - 238
Target Start/End: Complemental strand, 30099037 - 30098938
Alignment:
Q  137 aaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaa 236  Q
    |||||||| | ||| || || |||||| || | ||||| ||| |||||||||||||||| ||||||||||| |  |||||||| ||||||| |||| |||    
T  30099037 aaaagtgaatagaatgtaaagtgatttatgatcggatatatttatgtaaaagtgagttaaactataaattttt--gtaaaaattaattctagaatcgaaa 30098940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 35495371 - 35495293
Alignment:
Q  155 aattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatca 233  Q
    ||||||||| ||||||||||||||||  ||||||||| ||  || ||||||||| |  |||||||||||| || |||||    
T  35495371 aattgatttatgtttggatacattcaaataaaagtgatttgaacaataaatttgagtataaaaatcaattatagaatca 35495293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 40742212 - 40742166
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||||||||| | |||||||||||| ||||||||||||    
T  40742212 tttggttaaaagtgagttggatgtgaattgatttatgtttggataca 40742166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 176
Target Start/End: Original strand, 41289083 - 41289125
Alignment:
Q  134 attaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    ||||||||||||||||  |||||||||||| ||||||||||||    
T  41289083 attaaaagtgagttgattgtgaattgatttatgtttggataca 41289125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 441
Target Start/End: Complemental strand, 11185304 - 11185256
Alignment:
Q  390 tggaaacagcttataacatgtagtacataagttgttttcaacttatttccat 441  Q
    |||||||| ||||||||||||    |||||||||||||||||||||||||||    
T  11185304 tggaaacatcttataacatgtt---cataagttgttttcaacttatttccat 11185256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 356
Target Start/End: Original strand, 15677919 - 15677984
Alignment:
Q  291 caaacatgtcacaatcagatctacaccttcagaatcaattttagcccctctagaagtggaaccaaa 356  Q
    ||||||||||| |||||  | |||| || || ||||||||||| ||||| ||||||||||||||||    
T  15677919 caaacatgtcagaatcaattgtacaactccacaatcaattttaacccctgtagaagtggaaccaaa 15677984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 448
Target Start/End: Original strand, 25869275 - 25869308
Alignment:
Q  415 cataagttgttttcaacttatttccataaactct 448  Q
    ||||||||||||||| ||||||||||||||||||    
T  25869275 cataagttgttttcagcttatttccataaactct 25869308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 175
Target Start/End: Complemental strand, 26491021 - 26490976
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatac 175  Q
    |||| |||||||||||||||  || |||||||||||||||||||||    
T  26491021 tttggttaaaagtgagttgagtgtaaattgatttgtgtttggatac 26490976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 448
Target Start/End: Original strand, 28769348 - 28769381
Alignment:
Q  415 cataagttgttttcaacttatttccataaactct 448  Q
    ||||||||||||||| ||||||||||||||||||    
T  28769348 cataagttgttttcagcttatttccataaactct 28769381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 42149093 - 42149032
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtga 191  Q
    |||| |||||||||||||  |||||||||||||| |||||||||| | | || |||||||||    
T  42149093 tttggttaaaagtgagtttgaggtgaattgatttatgtttggatagacttatttaaaagtga 42149032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 1373121 - 1373081
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||||||||||||||| |||| |||||| ||||||||||||    
T  1373121 taaaagtgagttgaagttgaagtgatttatgtttggataca 1373081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 8245462 - 8245394
Alignment:
Q  168 ttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaa 236  Q
    ||||||||||||||| ||||||   ||| ||||||||||||||  ||| | ||||||||| ||||||||    
T  8245462 ttggatacattcatgcaaaagttgattaaactataaatttgtgtataacagtcaattctagaatcaaaa 8245394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 9908813 - 9908849
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtg 166  Q
    ||||||||||||||||||||| || ||||||||||||    
T  9908813 tttgattaaaagtgagttgaacgttaattgatttgtg 9908849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 307
Target Start/End: Original strand, 11791811 - 11791871
Alignment:
Q  247 tagaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatca 307  Q
    |||||||| ||||||||||||| ||||||||| |||||  ||| |||||||| || |||||    
T  11791811 tagaatcagttatggaggcaaattcaattatattcaaaggcaaccaaacatgccaaaatca 11791871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 136 - 227
Target Start/End: Original strand, 18356044 - 18356133
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattcta 227  Q
    |||||||||||||||||| |   | ||| |||| ||||||||| || |||| |||||||  | |||||||||||  ||||||||||||||||    
T  18356044 taaaagtgagttgaaggtaagggggtttatgttcggatacatttatctaaacgtgagttgaattataaatttgt--gtaaaaatcaattcta 18356133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 32809836 - 32809784
Alignment:
Q  137 aaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagt 189  Q
    |||| |||||||||||| || |||||||||||||| |  ||||||||||||||    
T  32809836 aaaaatgagttgaaggtaaagtgatttgtgtttggttctattcatgtaaaagt 32809784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 268 - 356
Target Start/End: Original strand, 32994322 - 32994410
Alignment:
Q  268 aatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaattttagcccctctagaagtggaaccaaa 356  Q
    |||||||| ||| | ||| ||| ||||||| ||| |||||  ||||||| | |||||||||||  | || |||||||||||||||||||    
T  32994322 aatcaattctacacgaaagcaaccaaacatatcataatcaattctacacatccagaatcaattacaacctctctagaagtggaaccaaa 32994410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 135 - 191
Target Start/End: Original strand, 42143390 - 42143446
Alignment:
Q  135 ttaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtga 191  Q
    |||||||||||||  |||||||||||||| |||||||||| | | || |||||||||    
T  42143390 ttaaaagtgagtttgaggtgaattgatttatgtttggataaacttatttaaaagtga 42143446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 158 - 194
Target Start/End: Original strand, 43492214 - 43492250
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagtt 194  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  43492214 tgatttatgtttggatacattcatgtaaaagtaagtt 43492250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 1e-45; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 71 - 247
Target Start/End: Complemental strand, 40491774 - 40491597
Alignment:
Q  71 tatgtttggtccttcggtgacaagaattgattttgagttaattgacaatgtaaaattaattt-gattaaaagtgagttgaaggtgaattgatttgtgttt 169  Q
    |||||||||| || |||||||||||||||||||||||| ||||||   ||||||||| |||| || |||||||||||||||||| || |||||| | |||    
T  40491774 tatgtttggttctgcggtgacaagaattgattttgagtgaattgattctgtaaaattgattttgactaaaagtgagttgaaggtaaagtgatttattttt 40491675  T
Q  170 ggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagcaccaaaact 247  Q
    |||||||||||||||||||||||||| ||| |||||||||| |||||| ||||||||| ||||||||||  |||||||    
T  40491674 ggatacattcatgtaaaagtgagttaaactttaaatttgtgtgtaaaagtcaattctagaatcaaaagctacaaaact 40491597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 45557495 - 45557393
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaa 235  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||   ||| ||||||||| |||||||||||| ||| ||| |||    
T  45557495 taaaagtgagttgaaggtaaagtgatttgtgtttggatacattcatgtaaaagtgagttgagctacaaatttgtgtgtaaaaatcaatcctagaattaaa 45557396  T
Q  236 agc 238  Q
    |||    
T  45557395 agc 45557393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 12306853 - 12306749
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactata---aatttgtgcgtaaaaatcaattctaaaatc 232  Q
    |||||||||||||||| | || |||||| ||||||| || ||||||||||||||||||| || ||||   |||||| | |||||||||||||||||||||    
T  12306853 taaaagtgagttgaagataaagtgatttatgtttggctagattcatgtaaaagtgagtt-gaatatagtgaatttgagtgtaaaaatcaattctaaaatc 12306755  T
Q  233 aaaagc 238  Q
    ||||||    
T  12306754 aaaagc 12306749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 227
Target Start/End: Original strand, 38123621 - 38123712
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattcta 227  Q
    ||||| |||||||||||| || | ||||||||| ||| |||||||||||||||||||||   | ||||||||| | ||||||||||||||||    
T  38123621 taaaattgagttgaaggtaaagtaatttgtgttcggacacattcatgtaaaagtgagttgaccaataaatttgagtgtaaaaatcaattcta 38123712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 360
Target Start/End: Complemental strand, 27571992 - 27571757
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaa 235  Q
    |||||||||||| ||||| || |||||| || ||||||||||| ||||||| |||||||  |  ||||| ||| | || ||||||||||||| |||||||    
T  27571992 taaaagtgagttaaaggtaaaatgatttatggttggatacatttatgtaaatgtgagttgaataataaacttgagtgttaaaatcaattctagaatcaaa 27571893  T
Q  236 agcaccaa-----------aactagaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaa 324  Q
    ||| ||||           || ||||||||||| | |||| |||||||||||||||| | | ||| |||||||||   | |||  |||||||||   |||    
T  27571892 agctccaatttctaacttcaagtagaatcaattcttgaggtaaaatcaattatactcgagagcaatcaaacatgtaggagtcaattctacacctcttgaa 27571793  T
Q  325 tcaattttagcccctctagaagtggaaccaaataca 360  Q
    |||| ||| | ||||||||||||| ||||| |||||    
T  27571792 tcaaatttggtccctctagaagtgaaaccatataca 27571757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 136 - 236
Target Start/End: Complemental strand, 25156330 - 25156230
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaa 235  Q
    ||||| |||||||||| | || ||||||||||||| |||||||||| ||||||||||||    ||| ||||| || |||||||||||||||| ||| |||    
T  25156330 taaaaatgagttgaagataaaatgatttgtgtttgaatacattcatataaaagtgagttgatttattaatttatgtgtaaaaatcaattctagaataaaa 25156231  T
Q  236 a 236  Q
    |    
T  25156230 a 25156230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 137 - 227
Target Start/End: Original strand, 40561714 - 40561804
Alignment:
Q  137 aaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattcta 227  Q
    |||| ||||||||| || || |||||| ||||||||||||||||||||||||||||||  || ||| ||||| | ||| |||| |||||||    
T  40561714 aaaattgagttgaaagtaaagtgatttatgtttggatacattcatgtaaaagtgagttgaacaatatatttgagtgtataaattaattcta 40561804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 9480588 - 9480645
Alignment:
Q  160 atttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaa 217  Q
    ||||||| ||| |||||||||| ||||||||||||| | |||||||||||||||||||    
T  9480588 atttgtgattgaatacattcatttaaaagtgagttaaattataaatttgtgcgtaaaa 9480645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 136 - 307
Target Start/End: Original strand, 40795944 - 40796113
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagacta-taaatttgtgcgtaaaaatcaattctaaaatcaa 234  Q
    ||||| ||| |||||||| || || ||| || |||||||||||||||||||||||| || || || |||||||| | || ||||||||||||| |||| |    
T  40795944 taaaaatgaattgaaggtaaagtggtttatgattggatacattcatgtaaaagtga-tttgaatagtaaatttgagtgttaaaatcaattctacaatcga 40796042  T
Q  235 aagcaccaaaactagaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatca 307  Q
    ||||  |  || |||||| |||  ||||||||||||||||| | ||| | | ||| ||||||||||| |||||    
T  40796043 aagcttc--aagtagaataaatactggaggcaaaatcaattttgctcgagagcaaccaaacatgtcagaatca 40796113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 71 - 187
Target Start/End: Original strand, 42481779 - 42481896
Alignment:
Q  71 tatgtttggtccttcggtgacaagaattgattttgagttaattgacaatgtaaaattaatt-tgattaaaagtgagttgaaggtgaattgatttgtgttt 169  Q
    |||||||| |||| |||||| ||||||||||||| ||| ||||||  |||||||||| ||| |||  |||||||||||||| || || |||||| ||||     
T  42481779 tatgtttgctcctgcggtgaaaagaattgattttaagtgaattgattatgtaaaattgattctgaaaaaaagtgagttgaatgtaaaatgatttatgttc 42481878  T
Q  170 ggatacattcatgtaaaa 187  Q
    |||| |||| || |||||    
T  42481879 ggatgcatttatctaaaa 42481896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 222
Target Start/End: Complemental strand, 17111981 - 17111889
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaa 222  Q
    ||||| ||||| ||| ||| |||| || |||||||||||||||| ||||||||||||| |||||   | |||||||||||| |||| ||||||    
T  17111981 tttgactaaaattgaattgtaggtaaagtgatttgtgtttggatgcattcatgtaaaaatgagtagaattataaatttgtgtgtaagaatcaa 17111889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 32683665 - 32683589
Alignment:
Q  162 ttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    |||||||| ||||||| | ||||||||||||||| | ||||||||| || |  |||||||||||||| |||||||||    
T  32683665 ttgtgtttagatacatccgtgtaaaagtgagttaaattataaatttatgtgggaaaatcaattctaatatcaaaagc 32683589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 178
Target Start/End: Complemental strand, 38230169 - 38230121
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacatt 178  Q
    |||| |||||||||||||||| |||||||||||| ||||||||||||||    
T  38230169 tttggttaaaagtgagttgaatgtgaattgatttatgtttggatacatt 38230121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 42816445 - 42816524
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaag 237  Q
    |||| |||||||| ||||||||||||| |||||| ||  | |||||||||||| || ||||||||||||| ||| |||||    
T  42816445 tgatatgtgtttgcatacattcatgtagaagtgaattgaattataaatttgtgtgtgaaaatcaattctagaattaaaag 42816524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 237
Target Start/End: Complemental strand, 22195971 - 22195893
Alignment:
Q  159 gatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaag 237  Q
    |||||||||||||||||||  |||||||||||| ||| ||||||||| ||   || |||||||||| || |||||||||    
T  22195971 gatttgtgtttggatacatgaatgtaaaagtgaattaaactataaatatgcatgtgaaaatcaattttagaatcaaaag 22195893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 48459811 - 48459765
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||||||||||| |||||||||||| ||||||||||||    
T  48459811 tttggttaaaagtgagttgaatgtgaattgatttatgtttggataca 48459765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 23441304 - 23441349
Alignment:
Q  244 aactagaatcaattatggaggcaaaatcaattatactcaaaaacaa 289  Q
    |||||||||||||||||||||||||||||||| ||||  |||||||    
T  23441304 aactagaatcaattatggaggcaaaatcaattgtacttgaaaacaa 23441349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 265 - 358
Target Start/End: Complemental strand, 45004975 - 45004882
Alignment:
Q  265 caaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaattttagcccctctagaagtggaaccaaata 358  Q
    ||||||||||||||||  | |  || ||||||||||| |||||  |||||||||  |||||||||||| |||| | |||||||| |||||||||    
T  45004975 caaaatcaattatactagagagtaaccaaacatgtcaaaatcaattctacacctctagaatcaattttggcccttttagaagtgaaaccaaata 45004882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 188
Target Start/End: Original strand, 33853443 - 33853491
Alignment:
Q  140 agtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaag 188  Q
    |||||||||||| | || |||||| ||||||||||||||||||||||||    
T  33853443 agtgagttgaagctaaagtgatttatgtttggatacattcatgtaaaag 33853491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 191
Target Start/End: Complemental strand, 37562666 - 37562610
Alignment:
Q  135 ttaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtga 191  Q
    |||||||||||||| | |||||||||||| |||||||||||| | || |||||||||    
T  37562666 ttaaaagtgagttggatgtgaattgatttatgtttggatacacttatttaaaagtga 37562610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 175
Target Start/End: Original strand, 42752204 - 42752244
Alignment:
Q  135 ttaaaagtgagttgaaggtgaattgatttgtgtttggatac 175  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  42752204 ttaaaagtgagttgaatgtgaattgatttatgtttggatac 42752244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 3622468 - 3622514
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||||||||| | |||||||||||| ||||||||||||    
T  3622468 tttggttaaaagtgagttggatgtgaattgatttatgtttggataca 3622514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 3750787 - 3750741
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||||||||| | |||||||||||| ||||||||||||    
T  3750787 tttggttaaaagtgagttggatgtgaattgatttatgtttggataca 3750741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 10371966 - 10372012
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||||||||||| |||||||||||| ||||||| ||||    
T  10371966 tttggttaaaagtgagttgaatgtgaattgatttatgtttggttaca 10372012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 39391145 - 39391191
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||||||||  |||||||||||||| ||||||||||||    
T  39391145 tttggttaaaagtgagtttgaggtgaattgatttatgtttggataca 39391191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 44967407 - 44967453
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||||||||||| |||||||||||| |||||| |||||    
T  44967407 tttggttaaaagtgagttgaatgtgaattgatttatgtttgaataca 44967453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 47022020 - 47021974
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||| ||||||| |||||||||||| ||||||||||||    
T  47022020 tttggttaaaagtaagttgaaagtgaattgatttatgtttggataca 47021974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 186
Target Start/End: Complemental strand, 1442720 - 1442651
Alignment:
Q  118 atgtaaaattaatt-tgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaa 186  Q
    |||||||||| ||| ||| ||||||||||||| |||| || || ||| ||| ||||||||||||||||||    
T  1442720 atgtaaaattgattctgactaaaagtgagttgcaggtaaagtggtttatgtatggatacattcatgtaaa 1442651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 66
Target Start/End: Complemental strand, 3019931 - 3019902
Alignment:
Q  37 tttgattgacttatttgagcttatctacta 66  Q
    ||||||||||||||||||||||||||||||    
T  3019931 tttgattgacttatttgagcttatctacta 3019902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 3375591 - 3375530
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtga 191  Q
    |||| |||||||||||||    ||||||||||||||||||||||||| |||  |||||||||    
T  3375591 tttggttaaaagtgagtttggtgtgaattgatttgtgtttggatacactcacttaaaagtga 3375530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 180
Target Start/End: Original strand, 15311189 - 15311274
Alignment:
Q  96 attgattttgagttaattgacaatgtaaaatt-aatttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattca 180  Q
    |||||||||||  |||||||   ||||||||| ||| || |||||||||||||||| ||  | |||||| ||||||||||||||||    
T  15311189 attgattttgaactaattgattgtgtaaaattgaatatggttaaaagtgagttgaatgtatagtgatttatgtttggatacattca 15311274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 273
Target Start/End: Complemental strand, 23458070 - 23458041
Alignment:
Q  244 aactagaatcaattatggaggcaaaatcaa 273  Q
    ||||||||||||||||||||||||||||||    
T  23458070 aactagaatcaattatggaggcaaaatcaa 23458041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 41386811 - 41386872
Alignment:
Q  177 ttcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    |||||| |||||||||||  | |||||||||||| ||||| |||||||||| ||| ||||||    
T  41386811 ttcatgcaaaagtgagttgaattataaatttgtgtgtaaatatcaattctagaattaaaagc 41386872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 259 - 307
Target Start/End: Complemental strand, 12306973 - 12306925
Alignment:
Q  259 tggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatca 307  Q
    ||||||||||||||||| ||||||| | ||| ||||||||||| |||||    
T  12306973 tggaggcaaaatcaattctactcaagagcaaccaaacatgtcaaaatca 12306925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 24109564 - 24109504
Alignment:
Q  161 tttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatca 221  Q
    ||||||||| ||||  |||||||||||||||| | ||||||| ||||||| || |||||||    
T  24109564 tttgtgttttgatatgttcatgtaaaagtgagctggactatagatttgtgtgtgaaaatca 24109504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 32295292 - 32295240
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtg 210  Q
    ||||||||||||  ||||||| |||||||||||||||  | ||||||||||||    
T  32295292 tgatttgtgttttaatacatttatgtaaaagtgagttgaattataaatttgtg 32295240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 130 - 178
Target Start/End: Complemental strand, 33746490 - 33746442
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacatt 178  Q
    |||||||||||||||||||||  | ||||||||| ||||||| ||||||    
T  33746490 tttgattaaaagtgagttgaatataaattgatttttgtttggttacatt 33746442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 39634173 - 39634217
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggata 174  Q
    |||| ||||||||||||||||  ||||||||||| ||||||||||    
T  39634173 tttggttaaaagtgagttgaatatgaattgatttatgtttggata 39634217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 307
Target Start/End: Original strand, 41386892 - 41386952
Alignment:
Q  247 tagaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatca 307  Q
    ||||||||||| || |||  ||||||||||||||| ||| ||| ||||||||||| |||||    
T  41386892 tagaatcaattctgaaggtgaaatcaattatactcgaaagcaatcaaacatgtcagaatca 41386952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 8e-35; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 158 - 356
Target Start/End: Complemental strand, 35065171 - 35064962
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagt-tagactataaatttgtgcgtaaaaatcaattctaaaatcaaaag-caccaaaactag------ 249  Q
    ||||||||||||||||||||||||||||||||||||  ||| |||||||||||| |||||||||||||||| ||||||||| ||| || |||||          
T  35065171 tgatttgtgtttggatacattcatgtaaaagtgagtggaga-tataaatttgtgtgtaaaaatcaattctagaatcaaaagtcacaaatactagcttcaa 35065073  T
Q  250 ----aatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaattttagcccctctagaa 345  Q
        |||||||||| ||||||||||||||| ||||| ||| ||| |||| |||||| |||||  ||||||||| || ||||||||||  |||||| ||||    
T  35065072 gtaaaatcaattattgaggcaaaatcaattctactcgaaagcaaccaaaaatgtcataatcaattctacacctccataatcaattttgacccctcgagaa 35064973  T
Q  346 gtggaaccaaa 356  Q
    |||||||||||    
T  35064972 gtggaaccaaa 35064962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 32818352 - 32818427
Alignment:
Q  163 tgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    ||||||||||||||||||||||||||| ||||  |||||||||||||| | |||||||||||||| ||||||||||    
T  32818352 tgtgtttggatacattcatgtaaaagttagttgaactataaatttgtgtgcaaaaatcaattctagaatcaaaagc 32818427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 21691189 - 21691269
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    ||||||||||||||||| ||||||||||||||| |||  |||||||||||||| || ||||||||||||| || |||||||    
T  21691189 tgatttgtgtttggatatattcatgtaaaagtgtgttgaactataaatttgtgtgtgaaaatcaattctacaaccaaaagc 21691269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 254 - 352
Target Start/End: Original strand, 46344915 - 46345013
Alignment:
Q  254 aattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaattttagcccctctagaagtggaac 352  Q
    |||||||||||||||||||||||||||  ||| ||| ||||||||||| ||| |  | ||||||| || |||||||||| | |||||||||||||||||    
T  46344915 aattatggaggcaaaatcaattatacttgaaagcaaccaaacatgtcagaattaattatacacctccataatcaattttgggccctctagaagtggaac 46345013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 149 - 238
Target Start/End: Original strand, 8604590 - 8604679
Alignment:
Q  149 aaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    ||||| || |||||| ||||||||||||||||||||||||||  ||  |||||||||||||| || ||||||||||||| |||| |||||    
T  8604590 aaggtaaagtgatttatgtttggatacattcatgtaaaagtgcattcaactataaatttgtgtgtgaaaatcaattctagaatcgaaagc 8604679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 247 - 356
Target Start/End: Complemental strand, 41058934 - 41058825
Alignment:
Q  247 tagaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaattttagcccctctagaag 346  Q
    ||||| ||||| |||| |||||||||||| ||||| ||||||  |||||||||||||||||  ||||| |||| |||||||||||  || | |||| |||    
T  41058934 tagaaacaattttggaagcaaaatcaattttactcgaaaacatccaaacatgtcacaatcaattctactcctttagaatcaatttaggctcatctaaaag 41058835  T
Q  347 tggaaccaaa 356  Q
    ||||||||||    
T  41058834 tggaaccaaa 41058825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 136 - 233
Target Start/End: Complemental strand, 47144344 - 47144247
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatca 233  Q
    ||||| |||||||||| |  |||||||| ||||||||||||||||| ||||||| |||| ||| ||||||||  ||||||||||||||| || |||||    
T  47144344 taaaattgagttgaagatatattgatttatgtttggatacattcatctaaaagttagttggacaataaattttagcgtaaaaatcaattatagaatca 47144247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 95 - 243
Target Start/End: Complemental strand, 4243560 - 4243410
Alignment:
Q  95 aattgattttgagttaattgacaatgtaaaattaattt-gattaaaagtgagttgaaggtgaattgatttgtgttt-ggatacattcatgtaaaagtgag 192  Q
    ||||||||||||||| || ||  |||||||||| |||  || ||||||| || || |||| || |||||| ||||| ||| ||||| |||||||||||||    
T  4243560 aattgattttgagttgatagattatgtaaaattgattccgactaaaagtaagatgtaggtaaagtgatttttgttttggagacattgatgtaaaagtgag 4243461  T
Q  193 ttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagcaccaa 243  Q
    |   || ||||||||| | |||||||||||||||| |||||||||| ||||    
T  4243460 tagaacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaa 4243410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 262 - 356
Target Start/End: Original strand, 49138927 - 49139021
Alignment:
Q  262 aggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaattttagcccctctagaagtggaaccaaa 356  Q
    ||||| |||||||| ||||  ||||||| ||||||||||| |||||  |||||||||  |||||||||||| ||| || ||||||||||||||||    
T  49138927 aggcacaatcaattttacttgaaaacaaccaaacatgtcagaatcaattctacacctctagaatcaattttggccactttagaagtggaaccaaa 49139021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 207
Target Start/End: Complemental strand, 43868308 - 43868195
Alignment:
Q  95 aattgattttgagttaattgacaatgtaaaattaatttga-ttaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagt 193  Q
    |||||||||||| | ||||||   |||||||||||||  | |||||||| ||||||| || || |||||||| |||||||||||| |||||||||||| |    
T  43868308 aattgattttgaatgaattgattttgtaaaattaattctagttaaaagtaagttgaaagtaaagtgatttgtctttggatacatttatgtaaaagtgact 43868209  T
Q  194 tagactataaattt 207  Q
    || | |||||||||    
T  43868208 taaattataaattt 43868195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 238
Target Start/End: Complemental strand, 45011979 - 45011902
Alignment:
Q  161 tttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    |||| ||||| |||||||||| ||||||||||| | | |||||||||||| || ||||||||||||| ||||||||||    
T  45011979 tttgggtttgaatacattcatataaaagtgagtaaaattataaatttgtgtgtgaaaatcaattctagaatcaaaagc 45011902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 88 - 191
Target Start/End: Complemental strand, 22250405 - 22250301
Alignment:
Q  88 tgacaagaattgattttgagttaattgacaatgtaaaattaatt-tgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaa 186  Q
    |||||| |||||||||||||  ||||||   ||||||||| ||| ||| |||||| |||||||| ||||| ||||||   ||||||||||||||||||||    
T  22250405 tgacaacaattgattttgagggaattgattctgtaaaattgattatgactaaaagcgagttgaatgtgaagtgatttacatttggatacattcatgtaaa 22250306  T
Q  187 agtga 191  Q
    |||||    
T  22250305 agtga 22250301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 10185293 - 10185222
Alignment:
Q  167 tttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    |||||||||||| |||||||||||||||| || ||||||||| | ||||| ||||||| || ||||||||||    
T  10185293 tttggatacattaatgtaaaagtgagttaaacaataaatttgagtgtaaagatcaattttagaatcaaaagc 10185222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 45694718 - 45694643
Alignment:
Q  162 ttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaag 237  Q
    |||||||||||||||||||||||||| ||||||  ||||||||| |||| || | ||||||||||| ||| |||||    
T  45694718 ttgtgtttggatacattcatgtaaaaatgagttcaactataaatgtgtgtgttagaatcaattctagaattaaaag 45694643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 250 - 356
Target Start/End: Complemental strand, 2635168 - 2635062
Alignment:
Q  250 aatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaattttagcccctctagaagtgg 349  Q
    |||||||| |||||||||||||| || |||| |||| ||| ||||||||||| |||||  | ||||| |  |||||||||||| | ||||||| |||||     
T  2635168 aatcaattctggaggcaaaatcagttctacttaaaagcaatcaaacatgtcaaaatcaattttacacttctagaatcaattttggtccctctaaaagtga 2635069  T
Q  350 aaccaaa 356  Q
    |||||||    
T  2635068 aaccaaa 2635062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 16552063 - 16551996
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattcta 227  Q
    ||||||| | |||||||||||||||||||||||||||  |||||||||||||  || |||||||||||||    
T  16552063 tgatttgagattggatacattcatgtaaaagtgagttgaactataaatttgt--gtgaaaatcaattcta 16551996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 41751221 - 41751327
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaa 229  Q
    |||| ||||||||||||| ||| | || |||||  |||||| |||||||||||||||| ||| ||| || ||||||||  |  ||||||||||||||| |    
T  41751221 tttgtttaaaagtgagttcaagataaagtgattaatgtttgaatacattcatgtaaaactgaattaaacaataaatttaagtttaaaaatcaattctaga 41751320  T
Q  230 atcaaaa 236  Q
    |||||||    
T  41751321 atcaaaa 41751327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 254 - 307
Target Start/End: Complemental strand, 22683864 - 22683811
Alignment:
Q  254 aattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatca 307  Q
    |||| ||||||||||||||||| ||||||||||||||| ||||||||| |||||    
T  22683864 aattctggaggcaaaatcaattttactcaaaaacaaaccaacatgtcaaaatca 22683811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 26911784 - 26911853
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattcta 227  Q
    |||||||||| || |||||||||||||||||||| ||| |||||||||||||  ||  ||||||||||||    
T  26911784 tgatttgtgtgtgtatacattcatgtaaaagtgaattaaactataaatttgtatgtggaaatcaattcta 26911853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 251 - 356
Target Start/End: Original strand, 54705472 - 54705577
Alignment:
Q  251 atcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaattttagcccctctagaagtgga 350  Q
    ||||||||| ||||||||||||||||||||    | ||| ||||||||||  |||||  | || ||||||| |  ||||||| |||||||||||||||||    
T  54705472 atcaattattgaggcaaaatcaattatacttgtgagcaaccaaacatgtctgaatcaattatataccttcatagccaattttggcccctctagaagtgga 54705571  T
Q  351 accaaa 356  Q
    ||||||    
T  54705572 accaaa 54705577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 56241856 - 56241917
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtga 191  Q
    ||||||||||||||||||  |  ||||||||||| |||||||||||||| ||||||||||||    
T  56241856 tttgattaaaagtgagtttgatatgaattgatttatgtttggatacattaatgtaaaagtga 56241917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 356
Target Start/End: Original strand, 21691318 - 21691406
Alignment:
Q  268 aatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaattttagcccctctagaagtggaaccaaa 356  Q
    |||||||  ||||| | ||||| |||| |||||| |||||  ||||||||| ||||||||||| | | |||||||||||||||||||||    
T  21691318 aatcaatactactcgacaacaaccaaatatgtcagaatcaattctacacctccagaatcaattctggtccctctagaagtggaaccaaa 21691406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 43385363 - 43385443
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    |||||||||||||||||  || |||||||||||||||   |||| ||  |||| || ||||||||||||||||||||||||    
T  43385363 tgatttgtgtttggatatttttatgtaaaagtgagttttgctattaacatgtgtgtgaaaatcaattctaaaatcaaaagc 43385443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 16492992 - 16492945
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacat 177  Q
    ||||||||||||||||||||| ||||||| |||| |||||||||||||    
T  16492992 tttgattaaaagtgagttgaatgtgaatttatttatgtttggatacat 16492945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 132 - 224
Target Start/End: Complemental strand, 29114853 - 29114755
Alignment:
Q  132 tgattaaaagtgagttgaaggtgaattgatttgtgtttggatacat------tcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaatt 224  Q
    ||||||||||||||||||||||    | ||||||||||||||||||      |||||||||||||||||| ||| || ||||||  |||||||||||||    
T  29114853 tgattaaaagtgagttgaaggtatggtaatttgtgtttggatacattcatattcatgtaaaagtgagttaaactttatatttgtatgtaaaaatcaatt 29114755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 1023873 - 1023931
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagtt 194  Q
    |||||||||||||||||| || |||||| |||||||||| ||| |||| ||||||||||    
T  1023873 taaaagtgagttgaaggtaaagtgatttttgtttggatatattgatgtgaaagtgagtt 1023931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 16566370 - 16566324
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||||||||||| |||||||||||| ||||||||||||    
T  16566370 tttggttaaaagtgagttgaatgtgaattgatttatgtttggataca 16566324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 191
Target Start/End: Original strand, 29149335 - 29149389
Alignment:
Q  137 aaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtga 191  Q
    |||||||||||||| |||||||||||| |||||||||||| |||  |||||||||    
T  29149335 aaaagtgagttgaatgtgaattgatttatgtttggatacactcaattaaaagtga 29149389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 39636850 - 39636804
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    ||||||||||||||||||| | |||||||||||| ||||||||||||    
T  39636850 tttgattaaaagtgagttggatgtgaattgatttatgtttggataca 39636804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 332
Target Start/End: Original strand, 53913657 - 53913739
Alignment:
Q  250 aatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaatttt 332  Q
    ||||||||||  |||||||||||||| ||||| | ||||||||||||||||  |||||  || |||| |||||||| ||||||    
T  53913657 aatcaattataaaggcaaaatcaattctactcgacaacaaacaaacatgtcggaatcaattcaacactttcagaatgaatttt 53913739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 191
Target Start/End: Original strand, 54487248 - 54487302
Alignment:
Q  137 aaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtga 191  Q
    |||||||||||||| || ||||||||| |||||||||||||| |||| |||||||    
T  54487248 aaaagtgagttgaatgtaaattgatttatgtttggatacattgatgtgaaagtga 54487302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 13167590 - 13167529
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtga 191  Q
    |||| |||||||||||||||| |||||||||||| | ||||||||||  ||| |||||||||    
T  13167590 tttggttaaaagtgagttgaatgtgaattgatttatatttggatacacccatttaaaagtga 13167529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 247 - 356
Target Start/End: Complemental strand, 43868144 - 43868035
Alignment:
Q  247 tagaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaattttagcccctctagaag 346  Q
    ||||||||||| ||||| |||||| |||| ||||  ||| ||| ||||||||| | ||| || | |||| ||||| |||||||||||||| ||||| |||    
T  43868144 tagaatcaattgtggagacaaaattaattctactagaaagcaaccaaacatgttagaattagttttacaacttcataatcaattttagccactctaaaag 43868045  T
Q  347 tggaaccaaa 356  Q
    | || |||||    
T  43868044 tagagccaaa 43868035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 296 - 356
Target Start/End: Complemental strand, 33456333 - 33456273
Alignment:
Q  296 atgtcacaatcagatctacaccttcagaatcaattttagcccctctagaagtggaaccaaa 356  Q
    |||||| |||||  ||||||| |||| |||||||| ||| |||||||||||||||||||||    
T  33456333 atgtcataatcaattctacacattcaaaatcaattatagtccctctagaagtggaaccaaa 33456273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 247 - 283
Target Start/End: Complemental strand, 38498271 - 38498235
Alignment:
Q  247 tagaatcaattatggaggcaaaatcaattatactcaa 283  Q
    |||||||||||||||||||||||| ||||||||||||    
T  38498271 tagaatcaattatggaggcaaaataaattatactcaa 38498235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 55927747 - 55927827
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    |||||| ||||||||||||||||||||||||||| ||  || ||||||||| | || |  |||||||||| ||||| ||||    
T  55927747 tgatttatgtttggatacattcatgtaaaagtgacttgaacaataaatttgagtgtgacgatcaattctagaatcagaagc 55927827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 335
Target Start/End: Original strand, 26617709 - 26617792
Alignment:
Q  252 tcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaattttagc 335  Q
    |||||||||||||||||||||||| || | |||| ||  ||||||||||| |||||  | ||||| |  |||||||||||||||    
T  26617709 tcaattatggaggcaaaatcaattctattgaaaagcatccaaacatgtcaaaatcaattttacacatctagaatcaattttagc 26617792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 34759468 - 34759542
Alignment:
Q  161 tttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaa 236  Q
    ||||||||| ||||||||||| | ||||||||||| || |||||||  || ||||||||||||| || ||||||||    
T  34759468 tttgtgtttagatacattcattttaaagtgagtta-acaataaattaatgtgtaaaaatcaattatagaatcaaaa 34759542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 238
Target Start/End: Original strand, 37566204 - 37566278
Alignment:
Q  161 tttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    ||||||||| ||||||||||| ||||| | || || ||||   ||||||| || ||||||||||||||||||||||||    
T  37566204 tttgtgtttagatacattcatataaaaataaggtaaacta---atttgtgtgtgaaaatcaattctaaaatcaaaagc 37566278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 38740286 - 38740369
Alignment:
Q  94 gaattgattttgagttaattgacaatgtaaaattaattt-gattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    ||||||||||||| | ||||||   ||||||||| |||| |  |||||||||||||||| |||| |||||| ||||||||||||    
T  38740286 gaattgattttgaatgaattgattttgtaaaattgattttggataaaagtgagttgaagttgaagtgatttatgtttggataca 38740369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 6138641 - 6138687
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||||||||| | |||||||||||| ||||||||||||    
T  6138641 tttggttaaaagtgagttggatgtgaattgatttatgtttggataca 6138687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 7223170 - 7223104
Alignment:
Q  121 taaaattaatttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaa 187  Q
    |||||||||||| ||| |||||||||| ||| | || |||||| ||||| ||||||||||| |||||    
T  7223170 taaaattaattttattgaaagtgagtttaagataaaatgatttatgtttagatacattcatttaaaa 7223104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 19592252 - 19592298
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||||||||| | |||||||||||| ||||||||||||    
T  19592252 tttggttaaaagtgagttggaagtgaattgatttatgtttggataca 19592298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 25312780 - 25312734
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    ||||||||||||||||||  | |||||||||||| ||||||||||||    
T  25312780 tttgattaaaagtgagttagatgtgaattgatttttgtttggataca 25312734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 26651869 - 26651915
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||||||||||| |||||||||||| ||||| ||||||    
T  26651869 tttggttaaaagtgagttgaatgtgaattgatttatgtttagataca 26651915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 33843841 - 33843783
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagtt 194  Q
    ||||||||||||| | || || |||||| |||||||||| |||||||||| ||||||||    
T  33843841 taaaagtgagttggatgtaaagtgatttatgtttggatatattcatgtaatagtgagtt 33843783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 124 - 238
Target Start/End: Original strand, 46344778 - 46344889
Alignment:
Q  124 aattaatttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaat 223  Q
    |||| |||||| |||| ||||||| ||| | || |||||| |||||||||||||| ||||||||||||||   ||| ||||||||||  ||||||||| |    
T  46344778 aattgatttgactaaatgtgagtttaag-taaagtgatttttgtttggatacatt-atgtaaaagtgagtcgaactttaaatttgtg-ttaaaaatcact 46344874  T
Q  224 tctaaaatcaaaagc 238  Q
    || | ||||||||||    
T  46344875 tccagaatcaaaagc 46344889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 46830090 - 46830136
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||||||||| | |||||||||||| ||||||||||||    
T  46830090 tttggttaaaagtgagttggatgtgaattgatttatgtttggataca 46830136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 51923005 - 51922959
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| ||||||||||||||||  ||||||||||| ||||||||||||    
T  51923005 tttggttaaaagtgagttgaatctgaattgatttatgtttggataca 51922959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 160 - 194
Target Start/End: Original strand, 53713540 - 53713574
Alignment:
Q  160 atttgtgtttggatacattcatgtaaaagtgagtt 194  Q
    ||||||||||||| |||||||||||||||||||||    
T  53713540 atttgtgtttggacacattcatgtaaaagtgagtt 53713574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 54150591 - 54150545
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    ||||||||||||||||||  | |||||||||||| ||||||||||||    
T  54150591 tttgattaaaagtgagttagatgtgaattgatttttgtttggataca 54150545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 238
Target Start/End: Complemental strand, 1616495 - 1616418
Alignment:
Q  161 tttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    |||||||||| |||||||||||||||| ||||||  ||| ||||  |||| ||   ||||||||||| ||||||||||    
T  1616495 tttgtgtttgaatacattcatgtaaaaatgagttgaactttaaacatgtgtgtgggaatcaattctagaatcaaaagc 1616418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 2206655 - 2206598
Alignment:
Q  137 aaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagtt 194  Q
    |||| ||||||||||||||| |||||| | ||||||| |||| |||| ||||||||||    
T  2206655 aaaattgagttgaaggtgaagtgatttatttttggatgcattaatgtgaaagtgagtt 2206598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 448
Target Start/End: Original strand, 7694019 - 7694052
Alignment:
Q  415 cataagttgttttcaacttatttccataaactct 448  Q
    ||||||||||||||| ||||||||||||||||||    
T  7694019 cataagttgttttcagcttatttccataaactct 7694052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 238
Target Start/End: Complemental strand, 30357581 - 30357540
Alignment:
Q  197 actataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    |||||||||||||| ||||||||||||| || ||||||||||    
T  30357581 actataaatttgtgtgtaaaaatcaattatataatcaaaagc 30357540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 238
Target Start/End: Original strand, 42971918 - 42971959
Alignment:
Q  197 actataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    |||||||||||||  ||||||||||||||||||| |||||||    
T  42971918 actataaatttgtatgtaaaaatcaattctaaaagcaaaagc 42971959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 46926113 - 46926052
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtga 191  Q
    |||| |||||||||||||  | |||||||||||| |||||||||||| || | |||||||||    
T  46926113 tttggttaaaagtgagttagatgtgaattgatttatgtttggatacactcgtttaaaagtga 46926052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 132 - 224
Target Start/End: Original strand, 7497620 - 7497711
Alignment:
Q  132 tgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaatt 224  Q
    ||||||||||||| |||||||| |||||| ||||||||||| | | |||| ||||| ||| ||| || |||||| |||| || ||| ||||||    
T  7497620 tgattaaaagtgaattgaaggtaaattga-ttgtgtttggacataatcatataaaaatgatttacacaataaatatgtgtgttaaattcaatt 7497711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 20712769 - 20712817
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgta 184  Q
    ||||| |||||||||||| || | ||||||||||||||||| |||||||    
T  20712769 taaaaatgagttgaaggtaaagttatttgtgtttggatacaatcatgta 20712817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 135 - 207
Target Start/End: Complemental strand, 22683995 - 22683923
Alignment:
Q  135 ttaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaattt 207  Q
    |||||||||||||||| || || || ||| |||||||| ||||| ||||||||| |||||  || ||||||||    
T  22683995 ttaaaagtgagttgaaagtaaaatggtttatgtttggacacatttatgtaaaagcgagttgaacaataaattt 22683923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 307
Target Start/End: Complemental strand, 25319055 - 25318995
Alignment:
Q  247 tagaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatca 307  Q
    ||||||||||| ||||| ||||||||||| ||||| | | ||| ||||||||||| |||||    
T  25319055 tagaatcaattctggagacaaaatcaattctactcgagagcaaccaaacatgtcaaaatca 25318995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 307
Target Start/End: Original strand, 33560648 - 33560708
Alignment:
Q  247 tagaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatca 307  Q
    ||||||||||| | ||||||||||||||| ||||| | | ||| ||||||||||| |||||    
T  33560648 tagaatcaattctagaggcaaaatcaattctactcgagagcaaccaaacatgtcaaaatca 33560708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 130 - 170
Target Start/End: Complemental strand, 33574243 - 33574203
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttg 170  Q
    |||| |||||||||||||||| |||||||||||| ||||||    
T  33574243 tttggttaaaagtgagttgaatgtgaattgatttatgtttg 33574203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 416 - 448
Target Start/End: Complemental strand, 35743342 - 35743310
Alignment:
Q  416 ataagttgttttcaacttatttccataaactct 448  Q
    ||||||||||| |||||||||||||||||||||    
T  35743342 ataagttgtttccaacttatttccataaactct 35743310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 36150669 - 36150625
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggata 174  Q
    ||||||||||||||||||||| || || |||||| ||||||||||    
T  36150669 tttgattaaaagtgagttgaatgtaaagtgatttatgtttggata 36150625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 38306071 - 38306031
Alignment:
Q  135 ttaaaagtgagttgaaggtgaattgatttgtgtttggatac 175  Q
    |||||||||||||||| | |||||||||| |||||||||||    
T  38306071 ttaaaagtgagttgaatgcgaattgatttatgtttggatac 38306031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 42944919 - 42944963
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggata 174  Q
    |||| |||||||||||||||| |||||||||||| ||||| ||||    
T  42944919 tttggttaaaagtgagttgaatgtgaattgatttatgtttagata 42944963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 47314975 - 47315051
Alignment:
Q  155 aattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaat 231  Q
    |||||||||  |||||||| ||| ||||||||||| |||| ||  |||||||||   |||| |||||||||||||||    
T  47314975 aattgatttaggtttggatgcatacatgtaaaagtaagttggaaaataaatttgactgtaataatcaattctaaaat 47315051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 48550448 - 48550492
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggata 174  Q
    |||| |||||||||||||| | |||||||||||| ||||||||||    
T  48550448 tttggttaaaagtgagttggatgtgaattgatttatgtttggata 48550492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 135 - 191
Target Start/End: Complemental strand, 49136582 - 49136526
Alignment:
Q  135 ttaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtga 191  Q
    |||||||||||||  | |||||||||||| |||||||||||| |||  |||||||||    
T  49136582 ttaaaagtgagtttgatgtgaattgatttatgtttggatacactcacttaaaagtga 49136526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 54488665 - 54488625
Alignment:
Q  135 ttaaaagtgagttgaaggtgaattgatttgtgtttggatac 175  Q
    |||||||||||||||| |||||||||||| |||||| ||||    
T  54488665 ttaaaagtgagttgaatgtgaattgatttatgtttgaatac 54488625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 3e-28; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 74 - 238
Target Start/End: Original strand, 32523226 - 32523397
Alignment:
Q  74 gtttggtccttcggtgacaagaattgattttgagttaattgacaatgtaaaattaattt-gattaaaagtgagttgaaggtgaattgatttgtgtttgga 172  Q
    ||||||| |||||||||||||||||||||||  || ||||||  | |||||||| |||| |||||||||| |||||||| | || |||||||||||||||    
T  32523226 gtttggttcttcggtgacaagaattgattttaggtgaattgattaggtaaaattgattttgattaaaagttagttgaagataaagtgatttgtgtttgga 32523325  T
Q  173 taca------ttcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    | ||      |||||||| |||||||||| ||| |||||||||| ||||||||||||| || ||||||||||    
T  32523326 tgcattcatgttcatgtataagtgagttaaactctaaatttgtgtgtaaaaatcaattttagaatcaaaagc 32523397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 142 - 238
Target Start/End: Original strand, 41596110 - 41596206
Alignment:
Q  142 tgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    ||||||||| || || |||||| |||||||||||||||||| |||||||||| | |||||||| ||||| |||||||||||||||  ||||||||||    
T  41596110 tgagttgaatgtaaagtgatttctgtttggatacattcatggaaaagtgagtcaaactataaacttgtgtgtaaaaatcaattctttaatcaaaagc 41596206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 31708194 - 31708296
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaa 235  Q
    |||||||||||||  | | || || ||||||||||||||||||||||||||||||||||  | |||||||||||| || | ||||||||||| |||||||    
T  31708194 taaaagtgagttgctgataaagtggtttgtgtttggatacattcatgtaaaagtgagttgaattataaatttgtgtgttagaatcaattctagaatcaaa 31708293  T
Q  236 agc 238  Q
    |||    
T  31708294 agc 31708296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 33791982 - 33792061
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgag-ttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaa 236  Q
    ||||||||||||||||| ||||||||||||||||| ||| || |||||||| || ||||||||||||| |||||||||||    
T  33791982 tgatttgtgtttggatagattcatgtaaaagtgagtttaaacaataaatttatgtgtaaaaatcaattataaaatcaaaa 33792061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 227
Target Start/End: Complemental strand, 31013194 - 31013057
Alignment:
Q  91 caagaattgattttgagttaattgacaatgtaaaattaattt-gattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagt 189  Q
    |||||||||||||||||| ||||||     ||||||| |||  || ||||||||||||| || | || |||||||||||||||| |||||||||| ||||    
T  31013194 caagaattgattttgagtgaattgattccataaaattgattccgactaaaagtgagttgtagataaagtgatttgtgtttggatgcattcatgtacaagt 31013095  T
Q  190 gagttagactataaatttgtgcgtaaaaatcaattcta 227  Q
    |||||  | | |||||||||| || | |||||||||||    
T  31013094 gagttgaattctaaatttgtgtgttagaatcaattcta 31013057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 238
Target Start/End: Original strand, 35264319 - 35264468
Alignment:
Q  90 acaagaattgattttgagttaattgacaatgtaaaattaatt-tgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaag 188  Q
    |||| |||||||||||||| ||||||   ||||||||| ||| | |  |||||||||||||| || || ||| || ||||||| |||||||||||||||     
T  35264319 acaataattgattttgagtgaattgattctgtaaaattgattgtaaccaaaagtgagttgaaagtaaagtgagttatgtttgggtacattcatgtaaaaa 35264418  T
Q  189 tgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    ||| ||  || ||||||||  | || ||||||||||||| ||||||||||    
T  35264419 tgacttgaacaataaatttaagtgttaaaatcaattctagaatcaaaagc 35264468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 4526224 - 4526161
Alignment:
Q  174 acattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaag 237  Q
    ||||| ||||||||||| |||  |||||||||||||| ||||||||||||| ||||||||||||    
T  4526224 acatttatgtaaaagtgtgttgaactataaatttgtgtgtaaaaatcaattttaaaatcaaaag 4526161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 139 - 238
Target Start/End: Original strand, 46853492 - 46853591
Alignment:
Q  139 aagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    |||| |||||||||| || |||||| |||  ||||| ||| |||||||||||||||  || ||||||||| | || ||||||||||||| ||||||||||    
T  46853492 aagtaagttgaaggtaaagtgatttatgtcaggatatatttatgtaaaagtgagttgaacaataaatttgagtgttaaaatcaattctagaatcaaaagc 46853591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 31084287 - 31084241
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||    
T  31084287 tttgattaaaagtgagttgaatgtgaattgatttatgtttggataca 31084241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 51285700 - 51285598
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaa 235  Q
    ||||||||||||||| || || | |||  || ||||||||||||||||||||| | |||| || | ||||||| | | |||||||||||||| |||||||    
T  51285700 taaaagtgagttgaatgtaaagtaattcatgcttggatacattcatgtaaaagcgggttaaacaacaaatttgagtgcaaaaatcaattctagaatcaaa 51285601  T
Q  236 agc 238  Q
    |||    
T  51285600 agc 51285598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 49526690 - 49526747
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaa 187  Q
    ||||||||||||||| ||||  || ||||||||| |||||||||||||||||||||||    
T  49526690 tttgattaaaagtgaattgattgtaaattgatttatgtttggatacattcatgtaaaa 49526747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 7262941 - 7262873
Alignment:
Q  139 aagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaattt 207  Q
    |||||||||||||||  | || ||| ||||| |||||||||||||||||||||||| ||| ||||||||    
T  7262941 aagtgagttgaaggtataatgttttatgttttgatacattcatgtaaaagtgagttggacgataaattt 7262873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 136 - 191
Target Start/End: Original strand, 1441362 - 1441417
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtga 191  Q
    ||||||||||||||| || || |||||||||||| |||||||||| ||||||||||    
T  1441362 taaaagtgagttgaacgtaaagtgatttgtgtttagatacattcacgtaaaagtga 1441417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 136 - 227
Target Start/End: Original strand, 35253422 - 35253513
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattcta 227  Q
    ||||| |||||| ||||| || |||||| | |||||| ||| |||||||||||||||||  |  ||||||||| | ||||||||||||||||    
T  35253422 taaaattgagtttaaggtaaagtgatttatatttggaaacaatcatgtaaaagtgagttgaatgataaatttgagtgtaaaaatcaattcta 35253513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 249 - 356
Target Start/End: Original strand, 48410891 - 48410998
Alignment:
Q  249 gaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaattttagcccctctagaagtg 348  Q
    ||||||||| ||||||||||||||||| ||||| ||| ||| ||||||| ||| |||||  || |||| |  |||||||||| |  |||||||| |||||    
T  48410891 gaatcaattttggaggcaaaatcaattctactcgaaagcaatcaaacatctcagaatcaattccacacttatagaatcaattctgacccctctaaaagtg 48410990  T
Q  349 gaaccaaa 356  Q
     |||||||    
T  48410991 taaccaaa 48410998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 3776652 - 3776550
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaa 235  Q
    ||||| ||||||||| || || |||||| || ||||||||||| |||||||||||||||   | | ||||||| | |||||||| ||||||| ||||| |    
T  3776652 taaaattgagttgaatgtaaagtgatttatgcttggatacattgatgtaaaagtgagttcagcaacaaatttgagtgtaaaaattaattctagaatcaga 3776553  T
Q  236 agc 238  Q
    |||    
T  3776552 agc 3776550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 191
Target Start/End: Complemental strand, 26519737 - 26519683
Alignment:
Q  137 aaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtga 191  Q
    |||||||||||||| |||||||||||| |||||||||||| |||  |||||||||    
T  26519737 aaaagtgagttgaatgtgaattgatttatgtttggatacactcaattaaaagtga 26519683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 37334989 - 37335091
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaa 235  Q
    ||||| |||||||||||| || |||||| ||| || |||||||||| ||||| ||||||  || || ||||   | |||||||||||||||| |||||||    
T  37334989 taaaattgagttgaaggtaaagtgatttatgtctgaatacattcatataaaaatgagttgaacaatgaattcaagtgtaaaaatcaattctagaatcaaa 37335088  T
Q  236 agc 238  Q
    |||    
T  37335089 agc 37335091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 50664838 - 50664792
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||||||||||| |||||||||||| ||||||||||||    
T  50664838 tttggttaaaagtgagttgaatgtgaattgatttatgtttggataca 50664792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 130 - 175
Target Start/End: Complemental strand, 23496397 - 23496352
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatac 175  Q
    |||| |||||||||||||||| |||||||||||| |||||||||||    
T  23496397 tttggttaaaagtgagttgaatgtgaattgatttatgtttggatac 23496352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 130 - 178
Target Start/End: Complemental strand, 34561188 - 34561140
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacatt 178  Q
    |||| |||||||||||||||| | |||||||||| ||||||||||||||    
T  34561188 tttggttaaaagtgagttgaatgcgaattgatttatgtttggatacatt 34561140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 42484454 - 42484545
Alignment:
Q  135 ttaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattcta 227  Q
    ||||||||| |||| |||| || |||||||||||| ||| ||| | |||||||||||||| || |||||||||||| ||   |||||||||||    
T  42484454 ttaaaagtgggttgcaggtaaagtgatttgtgtttagatgcatac-tgtaaaagtgagttggattataaatttgtgtgttttaatcaattcta 42484545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 234
Target Start/End: Complemental strand, 1290853 - 1290758
Alignment:
Q  140 agtgagttgaaggtgaattgatttg-tgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaa 234  Q
    |||||||||||||| || ||||||| |||||| |||||||||||||||||  ||||  ||  ||||| |||| || ||||| ||||||| ||||||    
T  1290853 agtgagttgaaggtaaaatgatttggtgtttgaatacattcatgtaaaagccagttgaaccgtaaatgtgtgtgttaaaatgaattctagaatcaa 1290758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 31766159 - 31766242
Alignment:
Q  94 gaattgattttgagttaattgacaatgtaaaattaattt-gattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    ||||||||||||| | ||||||   |||||||||||||| |  |||||||||||||||| | || |||||| ||||||||||||    
T  31766159 gaattgattttgaatgaattgattttgtaaaattaattttggataaaagtgagttgaagttaaagtgatttatgtttggataca 31766242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 236
Target Start/End: Complemental strand, 36302280 - 36302213
Alignment:
Q  169 tggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaa 236  Q
    ||||| ||||||||||||||||||||  || ||||||||  | |  ||||||||||||||||||||||    
T  36302280 tggattcattcatgtaaaagtgagttgaacaataaatttaagtgctaaaatcaattctaaaatcaaaa 36302213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 1290726 - 1290680
Alignment:
Q  310 tctacaccttcagaatcaattttagcccctctagaagtggaaccaaa 356  Q
    |||||||||  ||||||||||||||  ||||||||||||||||||||    
T  1290726 tctacacctctagaatcaattttagttcctctagaagtggaaccaaa 1290680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 158 - 224
Target Start/End: Original strand, 25359551 - 25359617
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaatt 224  Q
    |||||||||||||||||||||||| || |||||| ||  || |||||| |||| || ||||||||||    
T  25359551 tgatttgtgtttggatacattcatatagaagtgattttaacaataaatatgtgtgtgaaaatcaatt 25359617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 29305980 - 29305922
Alignment:
Q  172 atacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaa 230  Q
    |||||||||||||||||| |  || ||||||||||| ||  ||||||||||||||||||    
T  29305980 atacattcatgtaaaagtaaaataaactataaatttatgtctaaaaatcaattctaaaa 29305922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 30811553 - 30811598
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    ||||||||||||||||||||| ||||||||| || ||||||||||||    
T  30811553 tttgattaaaagtgagttgaatgtgaattga-ttatgtttggataca 30811598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 35425413 - 35425368
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    ||||||||||||||||||||| ||||||||| || ||||||||||||    
T  35425413 tttgattaaaagtgagttgaatgtgaattga-ttatgtttggataca 35425368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 584756 - 584837
Alignment:
Q  144 agttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattc 225  Q
    |||||||| | ||| ||||| |||||||||||||| ||||||||||||| || || || ||||||   | ||||||||||||    
T  584756 agttgaagctaaatggatttctgtttggatacatttatgtaaaagtgagctaaacaattaatttgactgcaaaaatcaattc 584837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 4984661 - 4984600
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtga 191  Q
    |||| |||||||||||||  | |||||||||||| |||||||||||| || | |||||||||    
T  4984661 tttggttaaaagtgagttagatgtgaattgatttatgtttggatacactcgtttaaaagtga 4984600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 448
Target Start/End: Original strand, 9279312 - 9279368
Alignment:
Q  389 atggaaacagcttataacatgtagtacataagttgttttcaacttatttccataaactct 448  Q
    ||||||||||||||||||||   ||| ||||| |||||||| ||||||||| ||||||||    
T  9279312 atggaaacagcttataacat---gtatataagctgttttcagcttatttccttaaactct 9279368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 443
Target Start/End: Complemental strand, 37273223 - 37273167
Alignment:
Q  384 agctaatggaaacagcttataacatgtagtacataagttgttttcaacttatttccataa 443  Q
    |||| ||||||||| ||||| ||||||    |||||||||||||||||||||||||||||    
T  37273223 agcttatggaaacaacttatgacatgtc---cataagttgttttcaacttatttccataa 37273167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 41591308 - 41591361
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagt 189  Q
    ||||| |||||||||  | || |||||| |||||||||||||||||||||||||    
T  41591308 taaaaatgagttgaatttaaagtgatttatgtttggatacattcatgtaaaagt 41591361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 14022103 - 14022047
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgag 192  Q
    ||||||||||||| || | || | |||||||||||||||||||||| ||||| ||||    
T  14022103 taaaagtgagttgcagataaagtaatttgtgtttggatacattcatttaaaattgag 14022047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 416 - 448
Target Start/End: Complemental strand, 26542597 - 26542565
Alignment:
Q  416 ataagttgttttcaacttatttccataaactct 448  Q
    |||| ||||||||||||||||||||||||||||    
T  26542597 ataacttgttttcaacttatttccataaactct 26542565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 415 - 443
Target Start/End: Complemental strand, 29771899 - 29771871
Alignment:
Q  415 cataagttgttttcaacttatttccataa 443  Q
    |||||||||||||||||||||||||||||    
T  29771899 cataagttgttttcaacttatttccataa 29771871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 38340885 - 38340841
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggata 174  Q
    |||| |||||||||||||| | |||||||||||| ||||||||||    
T  38340885 tttggttaaaagtgagttggatgtgaattgatttatgtttggata 38340841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 130 - 178
Target Start/End: Original strand, 44939437 - 44939484
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacatt 178  Q
    |||||||||||||||||||||  |||||||| || ||||||||||||||    
T  44939437 tttgattaaaagtgagttgaatatgaattga-ttatgtttggatacatt 44939484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 50550655 - 50550603
Alignment:
Q  185 aaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaag 237  Q
    ||||||||| | |||||||||||||| || |||||||||| || |||||||||    
T  50550655 aaagtgagtcaaactataaatttgtgtgtgaaaatcaattttagaatcaaaag 50550603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 3e-28; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 71 - 238
Target Start/End: Complemental strand, 7524309 - 7524141
Alignment:
Q  71 tatgtttggtccttcggtgacaagaattgattttgagttaattgacaatgtaaaattaatt-tgattaaaagtgagttgaaggtgaattgatttgtgttt 169  Q
    |||||||||| ||  |||||||| ||||||||||| || || |||   | ||||||| ||| | | |||||||||| | ||||| || ||||||||||||    
T  7524309 tatgtttggttctgtggtgacaataattgattttgggtgaactgattctataaaattgattctaactaaaagtgagctcaaggtaaagtgatttgtgttt 7524210  T
Q  170 ggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    ||| ||||| |||||||||||||||  |||||||||||||| |||||||||||||||| ||||||||||    
T  7524209 ggacacatttatgtaaaagtgagttgaactataaatttgtgtgtaaaaatcaattctataatcaaaagc 7524141  T

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Target: chr1; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 160 - 356
Target Start/End: Original strand, 28083867 - 28084074
Alignment:
Q  160 atttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagcaccaaa-----------acta 248  Q
    ||||||||||||||| ||||||||||||||||| |  |||  ||||||||| |||||||| |||| || ||||||||||  ||||           | ||    
T  28083867 atttgtgtttggatatattcatgtaaaagtgagctgaacttgaaatttgtgtgtaaaaattaattatagaatcaaaagctacaaattctagcttcaagta 28083966  T
Q  249 gaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaattttagcccctctagaagtg 348  Q
    |||||||||| | || ||||||||||| ||||| ||||||| |||| |||||| |||||  |||||||   |||| |||||||| || ||||||||||||    
T  28083967 gaatcaattacgaagacaaaatcaattctactcgaaaacaaccaaatatgtcagaatcaattctacactaccagagtcaattttggctcctctagaagtg 28084066  T
Q  349 gaaccaaa 356  Q
    ||| ||||    
T  28084067 gaatcaaa 28084074  T

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Target: chr1; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 160 - 236
Target Start/End: Complemental strand, 3416186 - 3416110
Alignment:
Q  160 atttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaa 236  Q
    |||||| ||||||||||| ||| ||||| ||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  3416186 atttgtctttggatacatccatataaaattgagttaaactataaatttgtgtgtaaaaatcaattctaaaataaaaa 3416110  T

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Target: chr1; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 1514458 - 1514371
Alignment:
Q  152 gtgaattga-tttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||  || ||||||||||| ||||||||||||| || ||| ||||||    
T  1514458 gtgaattgaatttgtgtttggatacattcatgtaaaaatgagttgaacaataaatttgtgtgtaaaaatcaattatataataaaaagc 1514371  T

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Target: chr1; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 158 - 236
Target Start/End: Complemental strand, 30557610 - 30557534
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaa 236  Q
    |||||||||||||||||||||||| ||||||||||||  |||||||||||||  || ||||||||||||| ||||||||    
T  30557610 tgatttgtgtttggatacattcatataaaagtgagttgaactataaatttgt--gtgaaaatcaattctagaatcaaaa 30557534  T

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Target: chr1; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 34915196 - 34915094
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaa 235  Q
    ||||||||||||| |||| || |||||| |||||| |||||||||||||||||||||||  | |||||| | ||| || | ||||||||||| |||||||    
T  34915196 taaaagtgagttgcaggtaaaatgatttatgtttgaatacattcatgtaaaagtgagttgaattataaaatggtgtgttagaatcaattctagaatcaaa 34915097  T
Q  236 agc 238  Q
    |||    
T  34915096 agc 34915094  T

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Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 178
Target Start/End: Complemental strand, 3516003 - 3515895
Alignment:
Q  71 tatgtttggtccttcggtgacaagaattgattttgagttaattgacaatgtaaaattaatt-tgattaaaagtgagttgaaggtgaattgatttgtgttt 169  Q
    ||||||||||  | ||||||  ||||||| |||||||| ||||||  |||||||||| ||| || | |||| ||||||||||||||| ||||||||||||    
T  3516003 tatgtttggttatgcggtgattagaattggttttgagtgaattgattatgtaaaattgattctggtgaaaattgagttgaaggtgaagtgatttgtgttt 3515904  T
Q  170 ggatacatt 178  Q
    |||||||||    
T  3515903 ggatacatt 3515895  T

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Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 646185 - 646128
Alignment:
Q  250 aatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatca 307  Q
    |||||||| ||||||||||||||||| ||||||||||||| ||||||||||| |||||    
T  646185 aatcaattctggaggcaaaatcaattctactcaaaaacaaccaaacatgtcataatca 646128  T

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Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 3016263 - 3016190
Alignment:
Q  165 tgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    ||||||||||||||||||||||||||||||  ||  ||||||| || ||||| |||||||||| ||||||||||    
T  3016263 tgtttggatacattcatgtaaaagtgagttgaaccgtaaatttatgtgtaaacatcaattctagaatcaaaagc 3016190  T

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Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 6283225 - 6283298
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaat 231  Q
    ||||||||||||||||||||||||  ||||  || ||| |||||||||||||| |||||||| |||||||||||    
T  6283225 tgatttgtgtttggatacattcataaaaaaacgaattaaactataaatttgtgtgtaaaaataaattctaaaat 6283298  T

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Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 238
Target Start/End: Complemental strand, 11049347 - 11049278
Alignment:
Q  169 tggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    |||||||||||| |||||||||| ||  |||||||||||||| ||||||||||||| || ||||||||||    
T  11049347 tggatacattcacgtaaaagtgacttgaactataaatttgtgtgtaaaaatcaattttagaatcaaaagc 11049278  T

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Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 139 - 238
Target Start/End: Complemental strand, 27849267 - 27849167
Alignment:
Q  139 aagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagac-tataaatttgtgcgtaaaaatcaattctaaaatcaaaag 237  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||||||  ||||  || | ||| |||||  ||||||||||||||||  ||||||||    
T  27849267 aagtgagttgaaggtaaaatgatttgtgttaggatacattcatgtaaaagaaagttgaacttttaagtttgtttgtaaaaatcaattctagtatcaaaag 27849168  T
Q  238 c 238  Q
    |    
T  27849167 c 27849167  T

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Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 32370008 - 32370086
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaa 236  Q
    |||||||||||||||||||||||||||||||  ||||  | |||||||||||| |||||||  ||||||| ||| ||||    
T  32370008 tgatttgtgtttggatacattcatgtaaaagcaagttcaattataaatttgtgtgtaaaaaataattctagaataaaaa 32370086  T

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Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 35961498 - 35961440
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagtt 194  Q
    |||||||||||||||||| || |||||| |||||  |||||||||||||||||||||||    
T  35961498 taaaagtgagttgaaggtaaaatgatttatgtttctatacattcatgtaaaagtgagtt 35961440  T

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Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 149 - 238
Target Start/End: Original strand, 10324906 - 10324995
Alignment:
Q  149 aaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    ||||| || |||| ||||| |||||||||| ||||||||||||||   || ||||||||| | ||||||||||||| || ||||||||||    
T  10324906 aaggtaaagtgatatgtgtatggatacattaatgtaaaagtgagtataacaataaatttgagtgtaaaaatcaattatagaatcaaaagc 10324995  T

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Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 30850393 - 30850454
Alignment:
Q  175 cattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaa 236  Q
    ||||||||||||||||||||  |||||||||||||  || ||||||||||||||||| ||||    
T  30850393 cattcatgtaaaagtgagttgaactataaatttgtatgttaaaatcaattctaaaattaaaa 30850454  T

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Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 213522 - 213594
Alignment:
Q  166 gtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    |||||||| ||||||||||||||||||||  || | ||||||| |  ||||||||||||||| ||||||||||    
T  213522 gtttggatgcattcatgtaaaagtgagttgaacaacaaatttgagtttaaaaatcaattctagaatcaaaagc 213594  T

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Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 95 - 234
Target Start/End: Original strand, 11817230 - 11817369
Alignment:
Q  95 aattgattttgagttaattgacaatgtaaaattaatt-tgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagt 193  Q
    |||||| ||||||| ||||||   ||||||||| ||| | | |||||| ||||||||| | || |||||| | |||| ||||||| |||||||||| |||    
T  11817230 aattgagtttgagtgaattgattttgtaaaattgattctaactaaaagcgagttgaagataaaatgatttttatttgaatacattaatgtaaaagttagt 11817329  T
Q  194 tagactataaatttgtgcgtaaaaatcaattctaaaatcaa 234  Q
    |  ||||||||||||||   ||||||||||| |||||||||    
T  11817330 tgaactataaatttgtg-taaaaaatcaattttaaaatcaa 11817369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 160 - 223
Target Start/End: Original strand, 52263626 - 52263689
Alignment:
Q  160 atttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaat 223  Q
    |||| |||||||||||||| |||||||| ||||||| || ||||||||| | ||||||||||||    
T  52263626 atttatgtttggatacattaatgtaaaactgagttaaacaataaatttgagtgtaaaaatcaat 52263689  T

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Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 1199931 - 1199885
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||||||||||| |||||||||||| ||||||||||||    
T  1199931 tttggttaaaagtgagttgaatgtgaattgatttatgtttggataca 1199885  T

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Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 5268349 - 5268291
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagtt 194  Q
    ||||||||||||||| || || |||||| |||||| ||| |||||||||||||||||||    
T  5268349 taaaagtgagttgaatgtaaagtgatttttgtttgaatatattcatgtaaaagtgagtt 5268291  T

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Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 20800299 - 20800345
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||||||||||| |||||||||||| ||||||||||||    
T  20800299 tttggttaaaagtgagttgaatgtgaattgatttatgtttggataca 20800345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 35569224 - 35569270
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||||||||||| |||||||||||| ||||||||||||    
T  35569224 tttggttaaaagtgagttgaatgtgaattgatttatgtttggataca 35569270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 47053503 - 47053465
Alignment:
Q  167 tttggatacattcatgtaaaagtgagttagactataaat 205  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  47053503 tttggatacattcatgtaaaagtgagttaaactataaat 47053465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 48511012 - 48510966
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||||||||||| |||||||||||| ||||||||||||    
T  48511012 tttggttaaaagtgagttgaatgtgaattgatttatgtttggataca 48510966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 142 - 238
Target Start/End: Original strand, 48548975 - 48549069
Alignment:
Q  142 tgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    |||||||||||| || |||||| ||||| |||||||| |||||||||||||||  || |||||  || |  ||||||||||||||| ||||| ||||    
T  48548975 tgagttgaaggtaaaatgatttatgttttgatacatttatgtaaaagtgagttgaacaataaa--tgagtttaaaaatcaattctagaatcagaagc 48549069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 49216784 - 49216833
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaattt 207  Q
    |||||||||||| |||||||||| ||||||||||||||||  ||||||||    
T  49216784 tgatttgtgtttagatacattcaagtaaaagtgagttagagcataaattt 49216833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 194
Target Start/End: Original strand, 213170 - 213294
Alignment:
Q  71 tatgtttggtccttcggtgacaagaattgattttgagttaattgacaatgtaaaattaattt-gattaaaagtgagttgaaggtgaattgatttgtgttt 169  Q
    |||||||||| || ||||||||| |||||||||||| | ||||||   | |||||||||||| || | |    || ||||| || || |||||| |||||    
T  213170 tatgtttggttctgcggtgacaaaaattgattttgattaaattgattctataaaattaattttgactgattaagaattgaatgtaaagtgatttatgttt 213269  T
Q  170 ggatacattcatgtaaaagtgagtt 194  Q
    |||||||| ||||||||||||||||    
T  213270 ggatacatgcatgtaaaagtgagtt 213294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 38797607 - 38797674
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattct 226  Q
    |||||| |||||| ||||||| || ||||||||||||  |||||||||||||| || ||||||||||||    
T  38797607 tgatttatgtttgcatacatt-atttaaaagtgagttgaactataaatttgtgtgtgaaaatcaattct 38797674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 318
Target Start/End: Complemental strand, 49824894 - 49824826
Alignment:
Q  250 aatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacacct 318  Q
    |||||||| ||||| ||||||||||| ||||| ||| |||||||| |||||| |||||  |||||||||    
T  49824894 aatcaattttggagccaaaatcaattgtactcgaaagcaaacaaagatgtcaaaatcaattctacacct 49824826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 1233429 - 1233350
Alignment:
Q  142 tgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatca 221  Q
    |||||| ||||| || | |||| ||||| ||||||||||||| ||||||||||  || ||||||||| | ||||||||||    
T  1233429 tgagtttaaggtaaaataatttatgtttagatacattcatgtgaaagtgagttcaacaataaatttgagtgtaaaaatca 1233350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 2099664 - 2099743
Alignment:
Q  158 tgatttgtgtttggatacattcatgt-aaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaa 236  Q
    |||||||||||||||||||||||| | |||| ||||||   |||||||||| || || ||||||||||||| || |||||    
T  2099664 tgatttgtgtttggatacattcatataaaaaatgagttgagctataaatttatgtgtgaaaatcaattctataaccaaaa 2099743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 238
Target Start/End: Complemental strand, 6021916 - 6021832
Alignment:
Q  150 aggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    |||| |||||||||||||||||||||||    |||||||||||||  || ||||| ||| | ||||||||| ||| || ||||||||||    
T  6021916 aggtaaattgatttgtgtttggatacat----gtaaaagtgagttgaaccataaacttgagtgtaaaaatctattatagaatcaaaagc 6021832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 299
Target Start/End: Original strand, 34721817 - 34721966
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagcaccaa-----aact---ag 249  Q
    |||||||| |||| ||||||| |||||||||| |||   |||||||||||||| || |||||||||| || ||| |||| || |||     ||||   ||    
T  34721817 tgatttgtatttgaatacattgatgtaaaagtaagtcgaactataaatttgtgtgtgaaaatcaattatagaataaaaaacaacaaatcctaacttcaag 34721916  T
Q  250 aatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgt 299  Q
    |||||||| |  ||||||||||||||||| | || ||||| |||||||||    
T  34721917 aatcaattctaaaggcaaaatcaattatatttaacaacaatcaaacatgt 34721966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 414 - 448
Target Start/End: Original strand, 11893601 - 11893635
Alignment:
Q  414 acataagttgttttcaacttatttccataaactct 448  Q
    |||||||||||||||| ||||||||||||||||||    
T  11893601 acataagttgttttcagcttatttccataaactct 11893635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 15084733 - 15084779
Alignment:
Q  310 tctacaccttcagaatcaattttagcccctctagaagtggaaccaaa 356  Q
    |||||||||||||||||||| ||  ||||||||||||| ||||||||    
T  15084733 tctacaccttcagaatcaatattgacccctctagaagtagaaccaaa 15084779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 15515024 - 15515078
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtg 190  Q
    |||||||||||||||||| ||  ||||| || ||||||| |||||||||||||||    
T  15515024 taaaagtgagttgaaggtaaagcgatttatgattggataaattcatgtaaaagtg 15515078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 15884331 - 15884285
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||||||||| | |||||||||||| ||||||||||||    
T  15884331 tttggttaaaagtgagttggatgtgaattgatttatgtttggataca 15884285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 329
Target Start/End: Complemental strand, 24587917 - 24587835
Alignment:
Q  247 tagaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaat 329  Q
    |||||||| || ||| | |||| |||||| ||||||| | ||| |||||||||||||||||  |||||||||  |||||||||    
T  24587917 tagaatcagttctggcgtcaaagtcaattctactcaagagcaaccaaacatgtcacaatcaattctacacctctagaatcaat 24587835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 31223478 - 31223432
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||||||||| | |||||||||||| ||||||||||||    
T  31223478 tttggttaaaagtgagttggatgtgaattgatttatgtttggataca 31223432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 40229492 - 40229538
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||||||||  |||||||||||||| ||||||||||||    
T  40229492 tttggttaaaagtgagtttgaggtgaattgatttatgtttggataca 40229538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 42850241 - 42850287
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||||||||| | |||||||||||| ||||||||||||    
T  42850241 tttggttaaaagtgagttggatgtgaattgatttatgtttggataca 42850287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 47123490 - 47123444
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    ||||||||||||||||||  | |||||||||||| ||||||||||||    
T  47123490 tttgattaaaagtgagttagatgtgaattgatttttgtttggataca 47123444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 288
Target Start/End: Original strand, 6932262 - 6932303
Alignment:
Q  247 tagaatcaattatggaggcaaaatcaattatactcaaaaaca 288  Q
    |||||||||||||||| |||||||||||| ||||| ||||||    
T  6932262 tagaatcaattatggatgcaaaatcaattttactcgaaaaca 6932303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 448
Target Start/End: Complemental strand, 11211179 - 11211146
Alignment:
Q  415 cataagttgttttcaacttatttccataaactct 448  Q
    ||||||||||||| ||||||||||||||||||||    
T  11211179 cataagttgtttttaacttatttccataaactct 11211146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 332
Target Start/End: Original strand, 15477826 - 15477911
Alignment:
Q  247 tagaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaatttt 332  Q
    |||||||||||||||||| ||||| |||||||||| | |  || ||||||| ||  |||||  | ||||||| |||||||||||||    
T  15477826 tagaatcaattatggaggaaaaattaattatactcgagagtaatcaaacatatctaaatcaattgtacacctccagaatcaatttt 15477911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 356
Target Start/End: Complemental strand, 30557480 - 30557415
Alignment:
Q  291 caaacatgtcacaatcagatctacaccttcagaatcaattttagcccctctagaagtggaaccaaa 356  Q
    ||||||||||| |||||  ||||||||| ||||||||||| ||| || | ||||||||| ||||||    
T  30557480 caaacatgtcagaatcaattctacacctccagaatcaattctagtccttgtagaagtgggaccaaa 30557415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 448
Target Start/End: Original strand, 33108631 - 33108664
Alignment:
Q  415 cataagttgttttcaacttatttccataaactct 448  Q
    ||||||||||||||||||||||||||||| ||||    
T  33108631 cataagttgttttcaacttatttccataagctct 33108664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 448
Target Start/End: Complemental strand, 35925751 - 35925718
Alignment:
Q  415 cataagttgttttcaacttatttccataaactct 448  Q
    |||||| |||||||||||||||||||||||||||    
T  35925751 cataagctgttttcaacttatttccataaactct 35925718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 43730066 - 43730111
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatac 175  Q
    |||| |||||||||||||||  || |||||||||||||||||||||    
T  43730066 tttggttaaaagtgagttgagtgtcaattgatttgtgtttggatac 43730111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 356
Target Start/End: Complemental strand, 44801483 - 44801387
Alignment:
Q  259 tggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaattttagcccctctagaagtggaaccaaa 356  Q
    ||||| ||||||||||||||||| | | ||| |||| |||||  |||||  |||||||||||| |||||||| ||  ||||||| || ||||||||||    
T  44801483 tggagacaaaatcaattatactcgacatcaatcaaatatgtccgaatcaattctacaccttcataatcaattataatccctcta-aaatggaaccaaa 44801387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 160 - 236
Target Start/End: Complemental strand, 3909967 - 3909891
Alignment:
Q  160 atttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaa 236  Q
    |||||| |||| ||| |||| |||||| |||||||| | ||| |||||||| || ||||||||||||| ||| ||||    
T  3909967 atttgtatttgaatagattcgtgtaaacgtgagttaaagtatgaatttgtgtgtgaaaatcaattctataatgaaaa 3909891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 28287337 - 28287393
Alignment:
Q  182 gtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    |||||||| ||||  || ||||||||| | || ||||||||||||||||||||||||    
T  28287337 gtaaaagttagttgaacaataaatttgagtgttaaaatcaattctaaaatcaaaagc 28287393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 33693133 - 33693085
Alignment:
Q  135 ttaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgt 183  Q
    ||||||| |||||||| || || |||||| |||||||||||||||||||    
T  33693133 ttaaaagcgagttgaacgtaaagtgatttatgtttggatacattcatgt 33693085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 34405061 - 34405029
Alignment:
Q  34 atgtttgattgacttatttgagcttatctacta 66  Q
    |||||||||||||||||||||| ||||||||||    
T  34405061 atgtttgattgacttatttgagtttatctacta 34405029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 135 - 191
Target Start/End: Original strand, 44786872 - 44786928
Alignment:
Q  135 ttaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtga 191  Q
    |||||| ||||||||| || || |||||| |||| | ||||||||||||||||||||    
T  44786872 ttaaaaatgagttgaatgtaaaatgatttatgttcgaatacattcatgtaaaagtga 44786928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 47321902 - 47321962
Alignment:
Q  176 attcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaa 236  Q
    |||||||||||||||| ||  ||||||||||||||  | ||||||||||||| ||| ||||    
T  47321902 attcatgtaaaagtgaattgaactataaatttgtgtatgaaaatcaattctagaattaaaa 47321962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 47411682 - 47411754
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaa 230  Q
    |||||||||||| |||| ||| || | ||| ||||||  |||||||||||||  ||||||||||||| |||||    
T  47411682 tgatttgtgtttcgataaatttattttaaaatgagtttaactataaatttgtttgtaaaaatcaattataaaa 47411754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 2e-26; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 16518908 - 16518827
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaa 217  Q
    |||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  16518908 taaaagtgagttgagggtaaaatgatttgtgtttggatacattcatgtaaaagtgagttgaactataaatttgtgcgtaaaa 16518827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 86 - 235
Target Start/End: Original strand, 11759763 - 11759913
Alignment:
Q  86 ggtgacaagaattgattttgagttaattgacaatgtaaaattaattt-gattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgta 184  Q
    ||||| || |||||| ||||||| ||||||   ||||||||| |||| ||||||||||||||||||||| ||||| |||||||||| ||||| | |||||    
T  11759763 ggtgaaaaaaattgagtttgagtgaattgattttgtaaaattgattttgattaaaagtgagttgaaggtaaattggtttgtgtttgtatacacttatgta 11759862  T
Q  185 aaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaa 235  Q
    |  |||| ||  |||||||||||||  |||||||||||||||| |||||||    
T  11759863 agcgtgatttgaactataaatttgtatgtaaaaatcaattctagaatcaaa 11759913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 136 - 275
Target Start/End: Complemental strand, 33502364 - 33502227
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaa 235  Q
    ||||||| ||||||| || || |||||||||||||||||||||   |||||||||||||  ||||||||| |||| ||||||||||||| || |||||||    
T  33502364 taaaagtaagttgaatgtaaagtgatttgtgtttggatacatt---gtaaaagtgagttgaactataaatatgtgtgtaaaaatcaattttagaatcaaa 33502268  T
Q  236 ag-caccaaaactagaatcaattatggaggcaaaatcaatt 275  Q
    ||  || || | ||||||||||| |||||||||||||||||    
T  33502267 agttacaaatagtagaatcaattctggaggcaaaatcaatt 33502227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 33019133 - 33019213
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||||||| || || |||||||||||||||| |||||||    
T  33019133 tgatttgtgtttggatgcattcatgtaaaagtgagttgaactataaatttatgtgtgaaaatcaattctaaaaccaaaagc 33019213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 22536106 - 22536026
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    ||||||||||||||||||||| |||||||| ||||||  ||||||||| |||| | |||||| ||||||||||||||||||    
T  22536106 tgatttgtgtttggatacatttatgtaaaaatgagtttaactataaatatgtgtgcaaaaattaattctaaaatcaaaagc 22536026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 3853989 - 3853932
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaa 187  Q
    ||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||    
T  3853989 tttgattaaaagtgagttgaatgtaaattgatttatgtttggatacattcatgtaaaa 3853932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 42741084 - 42741005
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    ||||||||||||| ||||||| ||||||||||||||| |||  |||||||| | |||||||||||||||| ||||||||||    
T  42741084 tgatttgtgtttgaatacatt-atgtaaaagtgagttggacagtaaatttgagtgtaaaaatcaattctagaatcaaaagc 42741005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 42982643 - 42982572
Alignment:
Q  167 tttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    ||||||||||||||||||||||||||||  |  ||||||||||| |||||||||||||||  ||||||||||    
T  42982643 tttggatacattcatgtaaaagtgagttgtaaaataaatttgtgtgtaaaaatcaattctggaatcaaaagc 42982572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 142 - 358
Target Start/End: Original strand, 680251 - 680471
Alignment:
Q  142 tgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagcacc 241  Q
    |||||||||||| || || |||||||||| |||||||||||||||||||||||  | | |||||||  | ||||||||  ||| || ||||   |||  |    
T  680251 tgagttgaaggtaaagtgttttgtgtttgcatacattcatgtaaaagtgagttgaattctaaattttagtgtaaaaattgattgtataatcgttagcttc 680350  T
Q  242 aaaactagaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcaga------tctacaccttcagaatcaattttagc 335  Q
      || ||||||||||| |||||||||||||| || || || ||| |||  |||||||||| ||| | |      |||||||||  |||||||||||||||    
T  680351 --aagtagaatcaattctggaggcaaaatcagttctattcgaaagcaactaaacatgtcaaaataaaataaaattctacacctctagaatcaattttagc 680448  T
Q  336 ccctctagaagtggaaccaaata 358  Q
     |||| | |||||||||||||||    
T  680449 tcctccaaaagtggaaccaaata 680471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 11504039 - 11504116
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaa 236  Q
    ||||||||||||  |||||||||||||||||||||||  ||||||| |||||| || |||| |||||||| ||||||||    
T  11504039 tgatttgtgttttaatacattcatgtaaaagtgagttgaactataactttgtgtgtgaaaa-caattctataatcaaaa 11504116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 158 - 236
Target Start/End: Complemental strand, 13912895 - 13912817
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaa 236  Q
    ||||||||||||||||||| |||||||||| ||||||  ||  |||||||||| |||||||| ||||||| ||| ||||    
T  13912895 tgatttgtgtttggatacaatcatgtaaaaatgagttgaacggtaaatttgtgtgtaaaaattaattctagaataaaaa 13912817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 34433325 - 34433371
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||    
T  34433325 tttgattaaaagtgagttgaatgtgaattgatttatgtttggataca 34433371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 137 - 194
Target Start/End: Original strand, 15220817 - 15220874
Alignment:
Q  137 aaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagtt 194  Q
    |||||||||||||| || || |||||| ||||||||||||||||||| ||||||||||    
T  15220817 aaaagtgagttgaatgtaaagtgatttatgtttggatacattcatgttaaagtgagtt 15220874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 43501231 - 43501153
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    ||||||||||||| |||||||||||||||| ||||||  | ||||| |||||  || | ||||||||||||||||||||||    
T  43501231 tgatttgtgtttgtatacattcatgtaaaactgagttgaattataattttgt--gttagaatcaattctaaaatcaaaagc 43501153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 44439381 - 44439276
Alignment:
Q  139 aagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    ||||||||| || || || |||||| ||||||||||  || |||||||||||||||  || ||||||||| | || |||||||||| || ||||||||||    
T  44439381 aagtgagttaaatgtaaagtgatttatgtttggatatgtttatgtaaaagtgagttgaacaataaatttgagtgttaaaatcaattttagaatcaaaagc 44439282  T
Q  239 accaaa 244  Q
     |||||    
T  44439281 tccaaa 44439276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 1976825 - 1976901
Alignment:
Q  142 tgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaa 218  Q
    |||||||||||| ||  || || ||||||||||||||||||||||||||||||  || ||||||||| | |||||||    
T  1976825 tgagttgaaggtaaagcgacttatgtttggatacattcatgtaaaagtgagttcaacaataaatttgagtgtaaaaa 1976901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 33047559 - 33047639
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    ||||||||||||||||||||| ||||||||||||| |  ||  ||||||| |  || ||||||| ||||||||||||||||    
T  33047559 tgatttgtgtttggatacatttatgtaaaagtgaggtgaaccgtaaatttttctgtgaaaatcatttctaaaatcaaaagc 33047639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 331
Target Start/End: Original strand, 33502926 - 33503010
Alignment:
Q  247 tagaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaattt 331  Q
    ||||||||||| |||| ||||||||| || ||||| | | ||| ||||||||||| |||||  | ||||||||||||||||||||    
T  33502926 tagaatcaattctggatgcaaaatcagttttactcgagagcaaccaaacatgtcaaaatcaattttacaccttcagaatcaattt 33503010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 174
Target Start/End: Original strand, 42089547 - 42089591
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggata 174  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||    
T  42089547 tttgattaaaagtgagttgaatgtgaattgatttatgtttggata 42089591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 268 - 331
Target Start/End: Original strand, 15928532 - 15928595
Alignment:
Q  268 aatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaattt 331  Q
    |||||||| ||||||| ||||| ||||||||||| |||||  ||||||||| ||||||||||||    
T  15928532 aatcaattctactcaacaacaaccaaacatgtcaaaatcaattctacacctccagaatcaattt 15928595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 32596095 - 32596020
Alignment:
Q  162 ttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaag 237  Q
    ||||||||||||| ||| |||||||||||||||  | ||| |||||||  ||||||||||||| || |||||||||    
T  32596095 ttgtgtttggatatatttatgtaaaagtgagttgaattatgaatttgtatgtaaaaatcaattttagaatcaaaag 32596020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 1945058 - 1945104
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||||||||||| |||||||||||| ||||||||||||    
T  1945058 tttggttaaaagtgagttgaatgtgaattgatttatgtttggataca 1945104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 191
Target Start/End: Complemental strand, 2213588 - 2213534
Alignment:
Q  137 aaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtga 191  Q
    |||||||||||||| |||||||||||| |||||||||||| |||  |||||||||    
T  2213588 aaaagtgagttgaatgtgaattgatttatgtttggatacactcaattaaaagtga 2213534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 191
Target Start/End: Original strand, 28127313 - 28127367
Alignment:
Q  137 aaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtga 191  Q
    |||||||||||||| |||||||||||| |||||||||||| |||  |||||||||    
T  28127313 aaaagtgagttgaatgtgaattgatttatgtttggatacactcaattaaaagtga 28127367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 136 - 229
Target Start/End: Original strand, 36893443 - 36893536
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaa 229  Q
    ||||| ||| ||||| || || |||||||||||| | ||||||| | |||||||| ||| |||| ||||||| |  ||||||||||||||||||    
T  36893443 taaaaatgaattgaaagtaaaatgatttgtgtttagttacattcgtataaaagtgggttggactttaaatttatttgtaaaaatcaattctaaa 36893536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 191
Target Start/End: Original strand, 9988525 - 9988581
Alignment:
Q  135 ttaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtga 191  Q
    |||||||||||||| | |||||||||||| |||||||||||| | || |||||||||    
T  9988525 ttaaaagtgagttggatgtgaattgatttatgtttggatacacttatttaaaagtga 9988581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 247 - 355
Target Start/End: Complemental strand, 30503217 - 30503109
Alignment:
Q  247 tagaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaattttagcccctctagaag 346  Q
    ||||||||||| |||||||||||||| || | ||  ||| ||| | ||||||| | |||||  ||||||| | || ||||||||||  ||||| ||||||    
T  30503217 tagaatcaattttggaggcaaaatcatttcttcttgaaatcaatcgaacatgttagaatcaattctacacttccaaaatcaattttgacccctttagaag 30503118  T
Q  347 tggaaccaa 355  Q
    |||||||||    
T  30503117 tggaaccaa 30503109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 32777976 - 32777924
Alignment:
Q  249 gaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtca 301  Q
    |||| |||||||||||||||||||||| ||| | ||||||| |||||||||||    
T  32777976 gaataaattatggaggcaaaatcaattctacacgaaaacaaccaaacatgtca 32777924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 330
Target Start/End: Complemental strand, 10644611 - 10644529
Alignment:
Q  247 tagaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaatt 330  Q
    |||||| |||| |||||||| |||||||| ||||| ||| || |||||||||||| | |||  |||||||||||||| ||||||    
T  10644611 tagaataaattttggaggcagaatcaattctactcgaaa-cagacaaacatgtcagagtcaattctacaccttcagagtcaatt 10644529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 446
Target Start/End: Complemental strand, 32615982 - 32615951
Alignment:
Q  415 cataagttgttttcaacttatttccataaact 446  Q
    ||||||||||||||||||||||||||||||||    
T  32615982 cataagttgttttcaacttatttccataaact 32615951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 2215341 - 2215295
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||||||||  |||||||||||||| ||||||||||||    
T  2215341 tttggttaaaagtgagtttgaggtgaattgatttatgtttggataca 2215295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 4894120 - 4894214
Alignment:
Q  144 agttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    |||||||||| || |||||| ||||| ||||||||||| ||||||||| ||  |  ||||||||| |  ||| |||||||| || ||||||||||    
T  4894120 agttgaaggtaaagtgatttatgtttagatacattcatttaaaagtgacttgaataataaatttgagtataataatcaattatagaatcaaaagc 4894214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 7632545 - 7632591
Alignment:
Q  132 tgattaaaagtgagttgaaggtgaattgatttgtgtttggatacatt 178  Q
    ||||||||||||| |||||||| || |||| ||||||||||||||||    
T  7632545 tgattaaaagtgaattgaaggtaaagtgatatgtgtttggatacatt 7632591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 297
Target Start/End: Complemental strand, 11510961 - 11510911
Alignment:
Q  247 tagaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacat 297  Q
    ||||||||| ||||||||||||||||||| ||||| ||||||  |||||||    
T  11510961 tagaatcaaatatggaggcaaaatcaattctactcgaaaacatccaaacat 11510911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 25747901 - 25747946
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    ||||||||||||||||||||| || ||||||||| ||||||||||||    
T  25747901 tttgattaaaagtgagttgaatgt-aattgatttatgtttggataca 25747946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 29419913 - 29419871
Alignment:
Q  424 ttttcaacttatttccataaactctatgggatagcaaatgaaa 466  Q
    ||||||||||||||||||||||||| | |||||||| ||||||    
T  29419913 ttttcaacttatttccataaactctctaggatagcatatgaaa 29419871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 30007572 - 30007618
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||||||||||| |||||||||||| ||||||| ||||    
T  30007572 tttggttaaaagtgagttgaatgtgaattgatttatgtttggttaca 30007618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 136 - 194
Target Start/End: Original strand, 40401598 - 40401656
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagtt 194  Q
    ||||| ||||||||||||  | | |||| ||||||||||||||||||||||||| ||||    
T  40401598 taaaaatgagttgaaggtagactaatttatgtttggatacattcatgtaaaagtcagtt 40401656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 416 - 450
Target Start/End: Original strand, 41032965 - 41032999
Alignment:
Q  416 ataagttgttttcaacttatttccataaactctat 450  Q
    |||||||||||||| ||||||||||||||||||||    
T  41032965 ataagttgttttcagcttatttccataaactctat 41032999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 2213736 - 2213675
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtga 191  Q
    |||| |||||||||||||  | |||||||||||||| |||||||||| | || |||||||||    
T  2213736 tttggttaaaagtgagtttgatgtgaattgatttgtctttggatacacttatttaaaagtga 2213675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 448
Target Start/End: Complemental strand, 3611398 - 3611365
Alignment:
Q  415 cataagttgttttcaacttatttccataaactct 448  Q
    |||||||||||||||||||||||||| |||||||    
T  3611398 cataagttgttttcaacttatttccacaaactct 3611365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 307
Target Start/End: Complemental strand, 4908782 - 4908737
Alignment:
Q  262 aggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatca 307  Q
    |||||||||||||| ||||| |||||| |||||||||||| |||||    
T  4908782 aggcaaaatcaattctactcgaaaacatacaaacatgtcaaaatca 4908737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 7296244 - 7296183
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtga 191  Q
    |||| |||||| ||||||  | |||||||||||| |||||||||||| |||| |||||||||    
T  7296244 tttggttaaaaatgagtttgatgtgaattgatttatgtttggatacactcatataaaagtga 7296183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 8800677 - 8800726
Alignment:
Q  160 atttgtgtttggatacattcatgtaaaagtgagttagactataaatttgt 209  Q
    |||| ||||||||||| ||||||||||||||||||  | |||||||||||    
T  8800677 atttatgtttggatacgttcatgtaaaagtgagttgaattataaatttgt 8800726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 448
Target Start/End: Complemental strand, 16867800 - 16867767
Alignment:
Q  415 cataagttgttttcaacttatttccataaactct 448  Q
    ||||||||||||||||||||||||||||| ||||    
T  16867800 cataagttgttttcaacttatttccataagctct 16867767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 27911495 - 27911434
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtga 191  Q
    |||| |||||||||||||  | |||||||||||| |||||||||| | |||| |||||||||    
T  27911495 tttggttaaaagtgagtttgatgtgaattgatttatgtttggatatactcatttaaaagtga 27911434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 30599923 - 30599968
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatac 175  Q
    |||| |||||||||||||||  || |||||||||||||||||||||    
T  30599923 tttggttaaaagtgagttgagtgtcaattgatttgtgtttggatac 30599968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 207
Target Start/End: Complemental strand, 37283431 - 37283314
Alignment:
Q  92 aagaattgattttgagttaattgacaatgtaaaattaattt-gattaaaagtgagttgaaggtgaattgatttgtgtttg-gatacattcatgtaaaagt 189  Q
    ||||||||||||||| | ||||||  || ||||||| |||| ||||||||||||||||||  | || | |||||| |||| |||| ||||| ||||||||    
T  37283431 aagaattgattttgactaaattgattatataaaattgatttagattaaaagtgagttgaaaataaaattatttgtatttgagatatattcaggtaaaagt 37283332  T
Q  190 gagttagactataaattt 207  Q
     ||||  |||||| ||||    
T  37283331 aagttgaactatatattt 37283314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 31453464 - 31453412
Alignment:
Q  185 aaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaag 237  Q
    ||||||||||| ||| ||||||||||||| ||||||||||  | |||||||||    
T  31453464 aaagtgagttaaactctaaatttgtgcgtgaaaatcaatttcagaatcaaaag 31453412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 307
Target Start/End: Original strand, 36987189 - 36987249
Alignment:
Q  247 tagaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatca 307  Q
    |||||||| || |||| ||||||||||||||||||||||  |  ||||||||||| |||||    
T  36987189 tagaatcatttctggaagcaaaatcaattatactcaaaagaatccaaacatgtcaaaatca 36987249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 283
Target Start/End: Complemental strand, 44505934 - 44505898
Alignment:
Q  247 tagaatcaattatggaggcaaaatcaattatactcaa 283  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  44505934 tagaaacaattatggaggcaaaatcaattttactcaa 44505898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 3e-22; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 434192 - 434294
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaa 235  Q
    ||||||||||||| |||| || ||||||||||||||||| |||| ||||||||||||||  | | ||||||| ||  |||||||||||||||||||||||    
T  434192 taaaagtgagttgcaggtaaaatgatttgtgtttggatatattcgtgtaaaagtgagttgaaatttaaatttatgtataaaaatcaattctaaaatcaaa 434291  T
Q  236 agc 238  Q
    |||    
T  434292 agc 434294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 158 - 357
Target Start/End: Original strand, 25195343 - 25195551
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagcaccaaaac---------ta 248  Q
    ||||||||||||||||||||| |||||||||||||||  | | ||||||||||  | |||||||||| || ||| |||| |  |||| |         ||    
T  25195343 tgatttgtgtttggatacatttatgtaaaagtgagttgaattgtaaatttgtgtatgaaaatcaattatagaatgaaaaactacaaatccgcttcaagta 25195442  T
Q  249 gaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaattttagcccctctagaagtg 348  Q
    |||||||||  ||||||| |||||||||||||| | | ||| ||||||||||| |||||  | ||||| | ||||||||||||| |  ||||||||||||    
T  25195443 gaatcaattccggaggcagaatcaattatactcgatagcaaccaaacatgtcagaatcaattatacacatccagaatcaattttggttcctctagaagtg 25195542  T
Q  349 gaaccaaat 357  Q
    |||||||||    
T  25195543 gaaccaaat 25195551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 158 - 356
Target Start/End: Complemental strand, 4911016 - 4910807
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagcaccaa-----------aac 246  Q
    |||||| |||||||||||||| ||||||||||||||   |||||||||||||  || ||||||||||||| ||||||||||  |||           ||     
T  4911016 tgatttatgtttggatacatttatgtaaaagtgagtcgaactataaatttgtatgtgaaaatcaattctagaatcaaaagctacaaatcatagcttcaag 4910917  T
Q  247 tagaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaattttagcccctctagaag 346  Q
    ||||||||||| | |||||| |||||||| || |  |  |||| ||||||||||| |||||  ||||||| ||||||||||||| ||| | ||||| |||    
T  4910916 tagaatcaatttttgaggcagaatcaattctaattgacgacaaccaaacatgtcagaatcaattctacacattcagaatcaattatagtctctctaaaag 4910817  T
Q  347 tggaaccaaa 356  Q
    ||||||||||    
T  4910816 tggaaccaaa 4910807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 91 - 356
Target Start/End: Original strand, 5724541 - 5724816
Alignment:
Q  91 caagaattgattttgagttaattgacaatgtaaaattaatttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtg 190  Q
    |||||||||||| ||||  ||||||   ||||||||| |||  ||| ||||| | |||||||| || ||||||||||||| |||  ||||| ||||||||    
T  5724541 caagaattgattctgagagaattgatcctgtaaaattgattc-attgaaagttaattgaaggtaaagtgatttgtgtttgaatatgttcatataaaagtg 5724639  T
Q  191 agttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagcaccaaaac-----------tagaatcaattatggaggcaaaatcaattatac 279  Q
    ||||| |  ||| ||||||| ||||||||||||| || ||| |||||   |||| |           ||||||||||| ||||||||||||||||| |||    
T  5724640 agttaaatgatatatttgtgtgtaaaaatcaattatagaataaaaagttacaaatcctagcttcaagtagaatcaattttggaggcaaaatcaattctac 5724739  T
Q  280 tcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaattttagcccctctagaagtggaaccaaa 356  Q
       ||| ||  ||||||||||| |||||  ||||||| |  ||||| |||||| |||||||||||||||||||||||    
T  5724740 ctgaaagcatccaaacatgtcagaatcaattctacacttctagaattaattttggcccctctagaagtggaaccaaa 5724816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 882817 - 882728
Alignment:
Q  135 ttaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaatt 224  Q
    |||||| |||||||||||| || |||||| |||||||||||||||||| |||||||||||| || |||||||||   |||||||||||||    
T  882817 ttaaaattgagttgaaggtaaaatgatttatgtttggatacattcatgcaaaagtgagttaaacaataaatttgaatgtaaaaatcaatt 882728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 3482154 - 3482077
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaa 235  Q
    ||||||||||||| |||||||||||||||||| ||||  |||||||| ||||| || |||||||||||||||||||||    
T  3482154 tgatttgtgtttgaatacattcatgtaaaagtaagttgaactataaacttgtgtgtgaaaatcaattctaaaatcaaa 3482077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 136 - 358
Target Start/End: Original strand, 1485101 - 1485335
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaa 235  Q
    |||||||||||| || ||  | ||||||  ||||||||||| | |||||||||||||||  || ||||||||| | || ||||||||||||| |||||||    
T  1485101 taaaagtgagtttaaagttgagtgatttacgtttggatacacttatgtaaaagtgagttgaacaataaatttgagtgttaaaatcaattctagaatcaaa 1485200  T
Q  236 agcaccaa-----------aactagaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtc-acaatcagatctacaccttcaga 323  Q
    ||| ||||           || ||||||||||| |  ||||||||| |||| ||||||| | |||||||||||||| | |||||  |||||||||  |||    
T  1485201 agctccaatttctagattcaagtagaatcaattctaaaggcaaaattaattctactcaagagcaaacaaacatgtcaagaatcaattctacacctctaga 1485300  T
Q  324 atcaattttagcccctctagaagtggaaccaaata 358  Q
    ||| || ||  |||||||||||||| |||||||||    
T  1485301 atccatattgacccctctagaagtgaaaccaaata 1485335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 92 - 210
Target Start/End: Complemental strand, 8856482 - 8856363
Alignment:
Q  92 aagaattgattttgagttaattgacaatgtaaaatt-aatttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtg 190  Q
    |||||||||||||||   ||||||  |||| ||||| ||||| |||||||||  ||||||||| || |||||||||||||||||||||||||| ||||||    
T  8856482 aagaattgattttgaaaaaattgatcatgtcaaattgaattttattaaaagttggttgaaggtaaaatgatttgtgtttggatacattcatgtgaaagtg 8856383  T
Q  191 agttagactataaatttgtg 210  Q
    ||||  |  |||||||||||    
T  8856382 agttgaaacataaatttgtg 8856363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 17225960 - 17225880
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    |||| |||| || ||||||||||||||||| ||||||  |||||||||||||  |||||||||||||||| ||||||||||    
T  17225960 tgatatgtggtttgatacattcatgtaaaactgagttgaactataaatttgtatgtaaaaatcaattctagaatcaaaagc 17225880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 238
Target Start/End: Complemental strand, 34621010 - 34620914
Alignment:
Q  142 tgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    |||||||||||| || |||||| |||||||||||||| |||||||||||||||  |  ||||||||  | |||||||||||||||| ||||| ||||    
T  34621010 tgagttgaaggtaaagtgatttatgtttggatacatttatgtaaaagtgagttgaaaaataaattttagtgtaaaaatcaattctagaatcagaagc 34620914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 238
Target Start/End: Complemental strand, 34748447 - 34748351
Alignment:
Q  142 tgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    |||||||||||| || |||||| |||||||||||||| |||||||||||||||  |  ||||||||  | |||||||||||||||| ||||| ||||    
T  34748447 tgagttgaaggtaaagtgatttatgtttggatacatttatgtaaaagtgagttgaaaaataaattttagtgtaaaaatcaattctagaatcagaagc 34748351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 34911072 - 34910975
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaa 235  Q
    |||||||||||||||||| || |||||| ||||||||||  ||||||||||||| ||||| |||||||  ||||| || ||||||||||||| |||||||    
T  34911072 taaaagtgagttgaaggt-aagtgatttatgtttggata--ttcatgtaaaagttagttaaactataa--ttgtgtgtcaaaatcaattctagaatcaaa 34910978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 247 - 352
Target Start/End: Original strand, 7952786 - 7952891
Alignment:
Q  247 tagaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaattttagcccctctagaag 346  Q
    |||||| |||| |||||||||||| || |  |||||||| ||| ||||||||||| |||||  | ||||||| || ||| |||||||||| |||||||||    
T  7952786 tagaataaattttggaggcaaaattaaatcaactcaaaaccaatcaaacatgtcataatcaattttacacctccataattaattttagcctctctagaag 7952885  T
Q  347 tggaac 352  Q
    ||||||    
T  7952886 tggaac 7952891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 332
Target Start/End: Complemental strand, 26280738 - 26280528
Alignment:
Q  132 tgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaat 231  Q
    |||||||||||| ||||||||| || | |||| ||||| ||||  || |||||||||||||||  ||||||||||||| |||||||||||||| |  |||    
T  26280738 tgattaaaagtgggttgaaggtaaaataatttatgtttagatatgtt-atgtaaaagtgagtttaactataaatttgtacgtaaaaatcaattttggaat 26280640  T
Q  232 caaaagcaccaa-----------aactagaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttc 320  Q
    ||||| |  |||           || | ||||||||| | ||||||||||||||| |||  |||||||| ||||||||||| |||||  ||||||||||     
T  26280639 caaaaactacaaattctagcttcaagtggaatcaattcttgaggcaaaatcaattctaccaaaaaacaatcaaacatgtcaaaatcaattctacaccttt 26280540  T
Q  321 agaatcaatttt 332  Q
    | ||||| ||||    
T  26280539 aaaatcattttt 26280528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 236
Target Start/End: Complemental strand, 8855048 - 8854950
Alignment:
Q  137 aaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaa 236  Q
    |||||| |||||||||| || | ||||||||||| ||||||| |||||||||| ||||  || ||||||||||  |||||||||||||||| | ||||||    
T  8855048 aaaagttagttgaaggtaaaataatttgtgtttg-atacattaatgtaaaagtaagttcaaccataaatttgtatgtaaaaatcaattctatagtcaaaa 8854950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 243
Target Start/End: Original strand, 31305802 - 31305909
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaa 235  Q
    |||||| | ||||||||| || | |||| |||||||||| ||| |||||||||||||||   | ||||||||| | ||| |||||||||||| |||||||    
T  31305802 taaaagggtgttgaaggtaaaatcatttatgtttggatatattaatgtaaaagtgagttgatcaataaatttgagtgtataaatcaattctagaatcaaa 31305901  T
Q  236 agcaccaa 243  Q
    ||| ||||    
T  31305902 agctccaa 31305909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 6653924 - 6653843
Alignment:
Q  158 tgatttgtgtttggatacattcat--gtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaag 237  Q
    ||||||||||||||||||| ||||  |||||||||||||| ||||||||||||   || ||| ||||||||| |||||||||    
T  6653924 tgatttgtgtttggatacaatcatatgtaaaagtgagttaaactataaatttgcatgtgaaactcaattctagaatcaaaag 6653843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 161 - 238
Target Start/End: Complemental strand, 25195953 - 25195878
Alignment:
Q  161 tttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    |||||||||||||||||| ||||||  |||||||  |||||||||||||| ||| || ||||||||| ||||||||||    
T  25195953 tttgtgtttggatacatttatgtaa--gtgagttgaactataaatttgtgtgtacaattcaattctagaatcaaaagc 25195878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 161 - 238
Target Start/End: Complemental strand, 16540212 - 16540135
Alignment:
Q  161 tttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    |||||||||||||||||| |||||||||||||||  ||||||||| |||  || ||| ||||||| | ||||||||||    
T  16540212 tttgtgtttggatacattgatgtaaaagtgagtttaactataaatatgtaagtgaaactcaattcaataatcaaaagc 16540135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 91 - 194
Target Start/End: Original strand, 46197 - 46301
Alignment:
Q  91 caagaattgattttgagttaattgacaatgtaaaattaatt-tgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagt 189  Q
    |||||||||||||||||| ||||||   ||||||||| ||| | | ||||||||||||| |  | || | |||||||||||||||||||| || ||||||    
T  46197 caagaattgattttgagtgaattgattctgtaaaattgattctaactaaaagtgagttgcaattaaagttatttgtgtttggatacattcgtggaaaagt 46296  T
Q  190 gagtt 194  Q
    |||||    
T  46297 gagtt 46301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 3289872 - 3289801
Alignment:
Q  138 aaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtg 210  Q
    ||||||||||| || | || ||||||||||||||||||||| |||||||||||||||  | ||||||||||||    
T  3289872 aaagtgagttgcagataaagtgatttgtgtttggatacatt-atgtaaaagtgagttgaattataaatttgtg 3289801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 25388175 - 25388108
Alignment:
Q  167 tttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaa 235  Q
    |||||||| ||| ||||||||||||||| ||| ||||||||| | || |||||||||||||||||||||    
T  25388175 tttggatatatttatgtaaaagtgagtt-gacaataaatttgagtgtcaaaatcaattctaaaatcaaa 25388108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 166 - 233
Target Start/End: Complemental strand, 852632 - 852565
Alignment:
Q  166 gtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatca 233  Q
    ||||| || ||||||||||||||||||||| || ||| ||||| | |||||||||||||||| |||||    
T  852632 gtttgtatgcattcatgtaaaagtgagttaaacaatacatttgggtgtaaaaatcaattctagaatca 852565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Original strand, 957600 - 957662
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatc 220  Q
    |||||| ||||||||||||||||||||||| ||||||| | | ||| |||||| |||||||||    
T  957600 tgatttatgtttggatacattcatgtaaaaatgagttaaattttaagtttgtgtgtaaaaatc 957662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 193
Target Start/End: Complemental strand, 1500079 - 1499973
Alignment:
Q  88 tgacaagaattgattttgagttaattgacaatgtaaaattaattt-gattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaa 186  Q
    |||||| |||||||||||| | ||||||   ||||||||| |||| |  |||||| |||||||  || ||||||||| |||||| ||||||| |||||||    
T  1500079 tgacaaaaattgattttgactgaattgattttgtaaaattgattttggctaaaagcgagttgagtgtaaattgatttatgtttgaatacatttatgtaaa 1499980  T
Q  187 agtgagt 193  Q
    |||||||    
T  1499979 agtgagt 1499973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 8860610 - 8860544
Alignment:
Q  160 atttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattct 226  Q
    |||||||||| |||||||||||| |||||||||||  || |||||||| || || ||||||||||||    
T  8860610 atttgtgtttagatacattcatgcaaaagtgagttgaaccataaatttatgtgtcaaaatcaattct 8860544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 16548219 - 16548173
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||||||||||| |||||||||||| ||||||||||||    
T  16548219 tttggttaaaagtgagttgaatgtgaattgatttatgtttggataca 16548173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 34027372 - 34027474
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaa 235  Q
    ||||||||||||||| ||||   | ||| || || |||| |||||||||| ||||||||  |  ||||||||| | |||||||||||||||| |||||||    
T  34027372 taaaagtgagttgaaagtgagacggtttatggttagatatattcatgtaagagtgagttgaataataaatttgagtgtaaaaatcaattctagaatcaaa 34027471  T
Q  236 agc 238  Q
    |||    
T  34027472 agc 34027474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 415 - 448
Target Start/End: Original strand, 17241261 - 17241294
Alignment:
Q  415 cataagttgttttcaacttatttccataaactct 448  Q
    ||||||||||||||||||||||||||||||||||    
T  17241261 cataagttgttttcaacttatttccataaactct 17241294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 33899026 - 33899087
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtga 191  Q
    ||||||||||||||||||  |  ||||||||||| |||||||||||| | ||||||||||||    
T  33899026 tttgattaaaagtgagtttgatatgaattgatttatgtttggatacactaatgtaaaagtga 33899087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 2234644 - 2234543
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagacta-taaatttgtgcgtaaaaatcaattctaaaatcaa 234  Q
    |||||||||| ||||||| || |||||||   ||||||||||| |||||| ||||||||  || | |||||||| | || ||||||||||||| ||||||    
T  2234644 taaaagtgagatgaaggtaaaatgatttgc--ttggatacatttatgtaatagtgagttgaacaaataaatttgagtgttaaaatcaattctagaatcaa 2234547  T
Q  235 aagc 238  Q
    ||||    
T  2234546 aagc 2234543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 3799034 - 3798974
Alignment:
Q  132 tgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgag 192  Q
    |||||||||||||||||||| | || |||||| |||||  |||||||||||||||| ||||    
T  3799034 tgattaaaagtgagttgaagataaaatgatttatgtttttatacattcatgtaaaaatgag 3798974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 442
Target Start/End: Original strand, 5566158 - 5566213
Alignment:
Q  384 agctaatggaaacagcttataacatgtagtacataagttgttttcaacttatttccata 442  Q
    |||||||| ||||||||||| ||||||    ||||||||||||||||||||||||||||    
T  5566158 agctaatgaaaacagcttattacatgtc---cataagttgttttcaacttatttccata 5566213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 268 - 356
Target Start/End: Original strand, 6896030 - 6896118
Alignment:
Q  268 aatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaattttagcccctctagaagtggaaccaaa 356  Q
    |||||||| ||||| | ||||| ||||||||||| |||||  |||||| || |||||||| |||| | | || ||||||||||||||||    
T  6896030 aatcaattgtactcgacaacaaccaaacatgtcataatcaattctacatctccagaatcattttttgtcactttagaagtggaaccaaa 6896118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 16442380 - 16442432
Alignment:
Q  139 aagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtga 191  Q
    |||||||||||| |||||||||||| |||||||||||| | || |||||||||    
T  16442380 aagtgagttgaatgtgaattgatttatgtttggatacacttatttaaaagtga 16442432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 21254898 - 21254945
Alignment:
Q  128 aatttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    ||||||||||||||||||||||| || ||||||||| ||||||||||||    
T  21254898 aatttgattaaaagtgagttgaatgt-aattgatttatgtttggataca 21254945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 330
Target Start/End: Original strand, 2008423 - 2008498
Alignment:
Q  255 attatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaatt 330  Q
    ||||||||| |||||| |||| ||||| ||||||| ||||||||||| || ||  ||||||||| || ||||||||    
T  2008423 attatggagacaaaatgaattctactcgaaaacaatcaaacatgtcagaaacaattctacacctccaaaatcaatt 2008498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 6208084 - 6208129
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    ||||||||||||||||||||| ||||||||| || ||||||||||||    
T  6208084 tttgattaaaagtgagttgaatgtgaattga-ttatgtttggataca 6208129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 25195132 - 25195201
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatt 206  Q
    |||||||||||||||||| || || ||| |||| ||||||||||||||||| |||| ||| || |||||||    
T  25195132 taaaagtgagttgaaggtaaagtgttttatgtt-ggatacattcatgtaaatgtgatttaaacaataaatt 25195201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 29409272 - 29409318
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    ||||||||||||||||||  | |||||||||||| ||||||||||||    
T  29409272 tttgattaaaagtgagtttgatgtgaattgatttatgtttggataca 29409318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 947661 - 947595
Alignment:
Q  170 ggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    |||||||||||||||||||||||||  | |||||  |||||  ||| ||||||||||| ||||||||||    
T  947661 ggatacattcatgtaaaagtgagttgaattataa--ttgtgtttaagaatcaattctagaatcaaaagc 947595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 236
Target Start/End: Complemental strand, 2748118 - 2748024
Alignment:
Q  142 tgagttgaa-ggtgaattgatttgtgtttggatacattcatgta-aaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaa 236  Q
    ||||||||| ||| || ||||||||||||||||| |||  |||| ||||||| ||  |||||||||||||| |||||||| ||||| ||||| ||||    
T  2748118 tgagttgaatggtaaagtgatttgtgtttggatagatt--tgtataaagtgaattgaactataaatttgtgtgtaaaaattaattcaaaaataaaaa 2748024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 458
Target Start/End: Original strand, 7931800 - 7931841
Alignment:
Q  417 taagttgttttcaacttatttccataaactctatgggatagc 458  Q
    ||||||||||||| ||||||||||||| |||||| |||||||    
T  7931800 taagttgttttcagcttatttccataagctctataggatagc 7931841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 10826171 - 10826110
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtga 191  Q
    |||| ||||||||||||||||  ||||||||||| |||||||||| | | || |||||||||    
T  10826171 tttggttaaaagtgagttgaatttgaattgatttttgtttggatatacttatttaaaagtga 10826110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 24982393 - 24982328
Alignment:
Q  166 gtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaat 231  Q
    ||||| |||||||||||||||||| ||||  || | ||||||| | |||||||||| |||||||||    
T  24982393 gtttgtatacattcatgtaaaagtaagttgaacaaaaaatttgagtgtaaaaatcagttctaaaat 24982328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 33997327 - 33997274
Alignment:
Q  135 ttaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaag 188  Q
    ||||||||||| |||| || | ||| ||| ||||||||||||||||||||||||    
T  33997327 ttaaaagtgagatgaatgtaatttggtttatgtttggatacattcatgtaaaag 33997274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 130 - 178
Target Start/End: Original strand, 1312460 - 1312508
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacatt 178  Q
    |||| |||||||||||||||| | |||||||||| |||| |||||||||    
T  1312460 tttggttaaaagtgagttgaatgcgaattgatttatgttcggatacatt 1312508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 415 - 443
Target Start/End: Original strand, 2160946 - 2160974
Alignment:
Q  415 cataagttgttttcaacttatttccataa 443  Q
    |||||||||||||||||||||||||||||    
T  2160946 cataagttgttttcaacttatttccataa 2160974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 135 - 191
Target Start/End: Complemental strand, 7486561 - 7486505
Alignment:
Q  135 ttaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtga 191  Q
    ||||||||||||| ||||| || |||||| ||||||||||  ||||||| |||||||    
T  7486561 ttaaaagtgagtttaaggtaaaatgatttatgtttggataagttcatgtgaaagtga 7486505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 190
Target Start/End: Complemental strand, 25208758 - 25208702
Alignment:
Q  134 attaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtg 190  Q
    ||||||||||||||||| || || |||||| ||||| |||| ||| |||||||||||    
T  25208758 attaaaagtgagttgaatgtaaaatgatttatgtttcgatagatttatgtaaaagtg 25208702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 29240407 - 29240455
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgta 184  Q
    ||||||||||||||| || |||| |||| ||||||||| ||||||||||    
T  29240407 taaaagtgagttgaatgtaaattcatttatgtttggatgcattcatgta 29240455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 415 - 443
Target Start/End: Complemental strand, 31583740 - 31583712
Alignment:
Q  415 cataagttgttttcaacttatttccataa 443  Q
    |||||||||||||||||||||||||||||    
T  31583740 cataagttgttttcaacttatttccataa 31583712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 307
Target Start/End: Original strand, 35098535 - 35098595
Alignment:
Q  247 tagaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatca 307  Q
    ||||||||||  |||| |||||||||||| |||||||||  || ||||||||||| |||||    
T  35098535 tagaatcaatcctggaagcaaaatcaattctactcaaaagtaaccaaacatgtcaaaatca 35098595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 51; Significance: 7e-20; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 250 - 356
Target Start/End: Complemental strand, 31831 - 31725
Alignment:
Q  250 aatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaattttagcccctctagaagtgg 349  Q
    |||||||| |||||||| |||||||| ||||| | ||||| ||||||||||| |||||  |||||||||  |||||||||||| | | ||||||||||||    
T  31831 aatcaattttggaggcagaatcaattttactcgacaacaaccaaacatgtcagaatcaattctacacctctagaatcaattttggtcactctagaagtgg 31732  T
Q  350 aaccaaa 356  Q
    |||||||    
T  31731 aaccaaa 31725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 161 - 238
Target Start/End: Complemental strand, 31934 - 31854
Alignment:
Q  161 tttgtgtttggatacattcatgtaaaagtgagttag---actataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    |||||||||||||||||| |||||||||||||||     ||||||||| |||  || ||||||||||| | ||||||||||    
T  31934 tttgtgtttggatacatttatgtaaaagtgagttgtttaactataaatatgtatgtgaaaatcaattcaataatcaaaagc 31854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 142 - 238
Target Start/End: Original strand, 14075 - 14171
Alignment:
Q  142 tgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    |||||||||||| || |||||| ||||||||||||||||||| ||||||||||  |  ||||||||| | |||||||||||||||| ||||| ||||    
T  14075 tgagttgaaggtaaagtgatttatgtttggatacattcatgtgaaagtgagttgaaaaataaatttgagtgtaaaaatcaattctagaatcataagc 14171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 6e-17; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 247 - 356
Target Start/End: Complemental strand, 5468781 - 5468673
Alignment:
Q  247 tagaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatcagatctacaccttcagaatcaattttagcccctctagaag 346  Q
    ||||||||| |||||||||| ||||||||||| || | ||||| ||||||||||| ||||| ||||||||||  |||||||||| |  ||||| || |||    
T  5468781 tagaatcaaatatggaggcagaatcaattataatcgacaacaatcaaacatgtcataatca-atctacacctctagaatcaattatgacccctttaaaag 5468683  T
Q  347 tggaaccaaa 356  Q
    ||||||||||    
T  5468682 tggaaccaaa 5468673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 161 - 238
Target Start/End: Original strand, 18851062 - 18851139
Alignment:
Q  161 tttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    ||||||||||||||  ||||||||||||||||||  ||||||||| |||| || ||||||||||||| ||||||||||    
T  18851062 tttgtgtttggataacttcatgtaaaagtgagtttaactataaatatgtgtgtgaaaatcaattctataatcaaaagc 18851139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 236
Target Start/End: Complemental strand, 38845552 - 38845473
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaa-gtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaa 236  Q
    ||||||||||||||||| |||||||||||| |||||||  |||||| ||||||| || ||||||||||||| ||||||||    
T  38845552 tgatttgtgtttggatatattcatgtaaaaagtgagtttaactatatatttgtgtgtgaaaatcaattctagaatcaaaa 38845473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 158 - 244
Target Start/End: Complemental strand, 42858216 - 42858130
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagcaccaaa 244  Q
    |||| |||||||| ||| |||||||||||||||||||  |||||||||||||| || |||||||||| || ||| |||||| |||||    
T  42858216 tgatctgtgtttgaataaattcatgtaaaagtgagttgaactataaatttgtgtgtgaaaatcaattatagaattaaaagctccaaa 42858130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 10898847 - 10898763
Alignment:
Q  139 aagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaatt 224  Q
    ||||||||||||||  ||||| ||| ||||||||||  ||||||||||||||||||  || ||||||||||| |||||||||||||    
T  10898847 aagtgagttgaaggcaaattgctttatgtttggatag-ttcatgtaaaagtgagttgaacaataaatttgtgtgtaaaaatcaatt 10898763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 28110431 - 28110494
Alignment:
Q  174 acattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaag 237  Q
    ||||| || ||||||||||||  |||||||||||||| || |||||||||||||||||||||||    
T  28110431 acatttatataaaagtgagttcaactataaatttgtgtgtgaaaatcaattctaaaatcaaaag 28110494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 6951260 - 6951362
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaa 235  Q
    ||||||||||| ||| || || ||| |||| |||||||| |||||||||||||||| ||  | ||||||||| || ||| ||||||||| || |||||||    
T  6951260 taaaagtgagtcgaaagtaaaatgacttgtatttggataaattcatgtaaaagtgaattgaattataaatttatgtgtacaaatcaattatagaatcaaa 6951359  T
Q  236 agc 238  Q
    |||    
T  6951360 agc 6951362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 71 - 208
Target Start/End: Original strand, 117387 - 117523
Alignment:
Q  71 tatgtttggtccttcggtgacaagaattgattttgagttaattgacaatgtaaaattaatt-tgattaaaagtgagttgaaggtgaattgatttgtgttt 169  Q
    |||||||||| ||  | |||||| ||||||||  |||| ||||||  |||||| ||| ||| ||| || ||||||||||||||| || |||||  |||||    
T  117387 tatgtttggttctgtgttgacaaaaattgatt--gagtgaattgattatgtaatattgattctgactagaagtgagttgaaggtaaaatgattcatgttt 117484  T
Q  170 ggatacattcatgtaaaagtgagttagactataaatttg 208  Q
    ||||||||  |||||||||||||||| || ||| |||||    
T  117485 ggatacatctatgtaaaagtgagttaaacaatacatttg 117523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 35108347 - 35108268
Alignment:
Q  158 tgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaag 237  Q
    ||||||||||||| ||| | ||||||||| ||| |||  |||||||||||| | |||||||||| || ||||||||||||    
T  35108347 tgatttgtgtttgaataaactcatgtaaatgtgtgttgaactataaatttgcgtgtaaaaatcagttttaaaatcaaaag 35108268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 191
Target Start/End: Complemental strand, 3667941 - 3667887
Alignment:
Q  137 aaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtga 191  Q
    |||||||||||||| |||||||||||| |||||||||||| |||  |||||||||    
T  3667941 aaaagtgagttgaatgtgaattgatttatgtttggatacactcaattaaaagtga 3667887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 22482283 - 22482237
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||||||||||| |||||||||||| ||||||||||||    
T  22482283 tttggttaaaagtgagttgaatgtgaattgatttatgtttggataca 22482237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 35073393 - 35073495
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaa 235  Q
    ||||||||| || ||||| || | |||| |||||  ||||||| || ||||||||||||| ||| |||||||| | || ||||||||||||| ||||| |    
T  35073393 taaaagtgaatttaaggtcaaataatttatgtttttatacatttatataaaagtgagttaaactttaaatttgagtgtcaaaatcaattctataatcata 35073492  T
Q  236 agc 238  Q
    |||    
T  35073493 agc 35073495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 4909854 - 4909789
Alignment:
Q  169 tggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaa 234  Q
    |||||| |||| ||||||||| ||||| ||| |||| |||||||||||||||||||| | ||||||    
T  4909854 tggatatattcgtgtaaaagttagttaaactttaaacttgtgcgtaaaaatcaattcaataatcaa 4909789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 415 - 448
Target Start/End: Original strand, 29590638 - 29590671
Alignment:
Q  415 cataagttgttttcaacttatttccataaactct 448  Q
    ||||||||||||||||||||||||||||||||||    
T  29590638 cataagttgttttcaacttatttccataaactct 29590671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 39987985 - 39988046
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtga 191  Q
    |||| |||||||||||||  |||||||||||||| |||||||||||| | || |||||||||    
T  39987985 tttggttaaaagtgagtttgaggtgaattgatttatgtttggatacacttatttaaaagtga 39988046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 175 - 238
Target Start/End: Complemental strand, 9818826 - 9818762
Alignment:
Q  175 cattcatgtaaaagtgagttagactataaatttgtgcgt-aaaaatcaattctaaaatcaaaagc 238  Q
    ||||||| ||||||||||||  ||||||||||||||  | |||||||||||||| ||||||||||    
T  9818826 cattcatataaaagtgagttgaactataaatttgtgtttaaaaaatcaattctagaatcaaaagc 9818762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 85 - 176
Target Start/End: Complemental strand, 14299508 - 14299416
Alignment:
Q  85 cggtgacaagaattgattttgagttaattgacaatgtaaaattaatttgat-taaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    ||||| |||||||| ||||||||| ||||||   ||||||||| |||  |  |||||||||||||||||| || ||||||||||||| |||||    
T  14299508 cggtggcaagaatttattttgagtgaattgattgtgtaaaattgattctagataaaagtgagttgaaggtaaagtgatttgtgtttgaataca 14299416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 18637413 - 18637312
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgt-aaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaa 234  Q
    ||||||||||||||  ||  | ||||||||||||||||| |||| | | |||| ||||||  ||||||||| ||||  ||||||||||||||| ||||||    
T  18637413 taaaagtgagttgagagtacagtgatttgtgtttggatagattctttttaaaattgagttgaactataaatgtgtg--taaaaatcaattctagaatcaa 18637316  T
Q  235 aagc 238  Q
    ||||    
T  18637315 aagc 18637312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 224
Target Start/End: Original strand, 27374249 - 27374337
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaatt 224  Q
    ||||||| |||| || || || ||||||||| ||| |||| |||||||||| |||||||| ||  |||||||||  |||||||||||||    
T  27374249 taaaagtaagttaaaagtaaagtgatttgtgattgaatactttcatgtaaatgtgagttaaaccgtaaatttgtatgtaaaaatcaatt 27374337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 98 - 181
Target Start/End: Complemental strand, 29923069 - 29922985
Alignment:
Q  98 tgattttgagttaattgacaatgtaaaattaattt-gattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcat 181  Q
    ||||||||| | ||||||  |||||||||| |||| || || |||||||||||| ||||| | |||| |||||||||||||||||    
T  29923069 tgattttgaatgaattgattatgtaaaattgattttgactataagtgagttgaatgtgaagtaatttatgtttggatacattcat 29922985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 31906392 - 31906288
Alignment:
Q  133 gattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatc 232  Q
    |||||||| |||||| ||||| || | |||||| || ||||  |||||||||||||||||||  ||||||||||| |  | ||| ||||||| || ||||    
T  31906392 gattaaaattgagttaaaggtaaaataatttgttttcggatgaattcatgtaaaagtgagttgaactataaatttatatgaaaatatcaattatataatc 31906293  T
Q  233 aaaag 237  Q
    |||||    
T  31906292 aaaag 31906288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 40885305 - 40885241
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagtt 194  Q
    ||||||||||||||||||| | |||||||||||| |||||||| ||| |  | ||||||||||||    
T  40885305 tttgattaaaagtgagttggatgtgaattgatttatgtttggacacacttgtttaaaagtgagtt 40885241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 174
Target Start/End: Original strand, 2483737 - 2483776
Alignment:
Q  135 ttaaaagtgagttgaaggtgaattgatttgtgtttggata 174  Q
    |||||||||||||||| |||||||||||| ||||||||||    
T  2483737 ttaaaagtgagttgaatgtgaattgatttatgtttggata 2483776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 176
Target Start/End: Complemental strand, 35760276 - 35760237
Alignment:
Q  137 aaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||||||||||||| |||||||||||| ||||||||||||    
T  35760276 aaaagtgagttgaatgtgaattgatttatgtttggataca 35760237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 4292243 - 4292197
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    ||||||||||| | ||||||| |||||||||||| ||||||||||||    
T  4292243 tttgattaaaaataagttgaatgtgaattgatttatgtttggataca 4292197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 160 - 194
Target Start/End: Original strand, 11577600 - 11577634
Alignment:
Q  160 atttgtgtttggatacattcatgtaaaagtgagtt 194  Q
    |||||||||||||| ||||||||||||||||||||    
T  11577600 atttgtgtttggatgcattcatgtaaaagtgagtt 11577634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 14671154 - 14671097
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagtt 194  Q
    ||||||||| ||||| ||||| | |||| ||||||||| ||||||||||||||||||||    
T  14671154 taaaagtgaattgaatgtgaagt-atttatgtttggatgcattcatgtaaaagtgagtt 14671097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 22226227 - 22226293
Alignment:
Q  172 atacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaagc 238  Q
    ||||||| |||||||||| |||   ||| |||||||||| |||||| | ||||||||||||||||||    
T  22226227 atacattaatgtaaaagttagtcgaactctaaatttgtgtgtaaaagttaattctaaaatcaaaagc 22226293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 208
Target Start/End: Complemental strand, 37877186 - 37877116
Alignment:
Q  138 aaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttg 208  Q
    ||||| ||||||||||  | || ||| ||||||||| ||||||| ||||||||||||| || |||||||||    
T  37877186 aaagtcagttgaaggtagagtggtttatgtttggattcattcatataaaagtgagttaaacaataaatttg 37877116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 38845651 - 38845697
Alignment:
Q  310 tctacaccttcagaatcaattttagcccctctagaagtggaaccaaa 356  Q
    ||||||||| ||||||||||||| | | |||||||||||||||||||    
T  38845651 tctacacctccagaatcaattttggtctctctagaagtggaaccaaa 38845697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 41834986 - 41834940
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggataca 176  Q
    |||| |||||||||||||| | |||||||||||| ||||||||||||    
T  41834986 tttggttaaaagtgagttggaagtgaattgatttatgtttggataca 41834940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 4306636 - 4306591
Alignment:
Q  142 tgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaa 187  Q
    ||||||||| || || |||||| |||||||||||||||||||||||    
T  4306636 tgagttgaatgtaaaatgatttatgtttggatacattcatgtaaaa 4306591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 8049069 - 8049130
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtga 191  Q
    |||| |||||||||||||  |||| ||||||||| |||||||||||| | || |||||||||    
T  8049069 tttggttaaaagtgagtttgaggttaattgatttatgtttggatacacttatttaaaagtga 8049130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 13253101 - 13253161
Alignment:
Q  130 tttgattaaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtga 191  Q
    |||| ||||||||||||||||  |||||||| || |||||||||||| |||| |||||||||    
T  13253101 tttggttaaaagtgagttgaatatgaattga-ttatgtttggatacactcatttaaaagtga 13253161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 448
Target Start/End: Original strand, 33533548 - 33533581
Alignment:
Q  415 cataagttgttttcaacttatttccataaactct 448  Q
    ||||||||||||||||||||||||||||| ||||    
T  33533548 cataagttgttttcaacttatttccataagctct 33533581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 8591592 - 8591520
Alignment:
Q  155 aattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattcta 227  Q
    ||||||||| | ||||||||||||| | ||||||||||||  || | ||||||| | | ||||||||||||||    
T  8591592 aattgatttatatttggatacattcctataaaagtgagttgaacaacaaatttgagtgaaaaaatcaattcta 8591520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 9818916 - 9818872
Alignment:
Q  71 tatgtttggtccttcggtgacaagaattgattttgagttaattga 115  Q
    |||||||||| || |||||||||||||| ||||||||| ||||||    
T  9818916 tatgtttggttctgcggtgacaagaatttattttgagtgaattga 9818872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 28031157 - 28031228
Alignment:
Q  164 gtgtttggatacattcatgtaaaagtgagttagactataaatttgtgcgtaaaaatcaattctaaaatcaaaa 236  Q
    ||||||| |||||||||||||||||| ||||   |||||||||||||  ||||| |||||| || ||||||||    
T  28031157 gtgtttgaatacattcatgtaaaagtaagttgatctataaatttgtg-ttaaaagtcaattatataatcaaaa 28031228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 136 - 208
Target Start/End: Original strand, 35138978 - 35139050
Alignment:
Q  136 taaaagtgagttgaaggtgaattgatttgtgtttggatacattcatgtaaaagtgagttagactataaatttg 208  Q
    ||||| |||||||||||| || |||||| ||||  ||||||||||| | ||||||||||  || |||||||||    
T  35138978 taaaattgagttgaaggtaaaatgatttatgttcagatacattcatatgaaagtgagttgaacaataaatttg 35139050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 307
Target Start/End: Complemental strand, 43012745 - 43012685
Alignment:
Q  247 tagaatcaattatggaggcaaaatcaattatactcaaaaacaaacaaacatgtcacaatca 307  Q
    |||||||||||  | | |||||||||||| ||||| ||| ||||||||||||||| |||||    
T  43012745 tagaatcaattcagaaagcaaaatcaattctactctaaatcaaacaaacatgtcaaaatca 43012685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0314 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0314
Description:

Target: scaffold0314; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 356
Target Start/End: Complemental strand, 17390 - 17325
Alignment:
Q  291 caaacatgtcacaatcagatctacaccttcagaatcaattttagcccctctagaagtggaaccaaa 356  Q
    |||| |||||| |||||  ||||||||| ||||||||||||| |   |||||||||||||||||||    
T  17390 caaatatgtcataatcaattctacacctccagaatcaattttggttactctagaagtggaaccaaa 17325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 415 - 443
Target Start/End: Complemental strand, 16171 - 16143
Alignment:
Q  415 cataagttgttttcaacttatttccataa 443  Q
    |||||||||||||||||||||||||||||    
T  16171 cataagttgttttcaacttatttccataa 16143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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