View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0727_low_45 (Length: 251)
Name: NF0727_low_45
Description: NF0727
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0727_low_45 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 12 - 251
Target Start/End: Complemental strand, 29053213 - 29052974
Alignment:
| Q |
12 |
agagaagaaagcaaccctgcaaaaagcaaagtatccttcccctgaaaaacattagcaacaagaattcccttctgcattgtacttgtcacatgagttccca |
111 |
Q |
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| T |
29053213 |
agagaagaaagcaaccctgcaaaaagcaaagtatccttcccctgaaaaacattagcaacaagaattcccttctgcattgtactagtcacatgagttccca |
29053114 |
T |
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| Q |
112 |
tcaacaatgccccagaaaactccaacactgcagctgttaacacagcttgcctaagtgacaatgcaccagatccaacagaagttcccattgcatttgcaac |
211 |
Q |
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||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
29053113 |
tcaacaatgcccctgaaaactccaacactgcagctgtcaacacagcttgcctaagtgacaatgcaccagatccaactgaagttcccattgcatttgcaac |
29053014 |
T |
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| Q |
212 |
atcattagcaccaatgttccaagccatgtaaaatccaaac |
251 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
29053013 |
atcattagcaccaatgttccaagccatgtaaaatccaaac |
29052974 |
T |
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