View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0728_high_13 (Length: 301)

Name: NF0728_high_13
Description: NF0728
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0728_high_13
NF0728_high_13
[»] scaffold0057 (2 HSPs)
scaffold0057 (74-301)||(69842-70069)
scaffold0057 (239-298)||(72277-72336)
[»] scaffold0138 (2 HSPs)
scaffold0138 (68-301)||(20933-21166)
scaffold0138 (68-301)||(33949-34181)
[»] chr5 (34 HSPs)
chr5 (68-301)||(17011564-17011797)
chr5 (85-301)||(265874-266090)
chr5 (74-301)||(29448676-29448903)
chr5 (211-301)||(21503975-21504065)
chr5 (165-301)||(20313111-20313248)
chr5 (68-122)||(10774647-10774701)
chr5 (84-138)||(20469175-20469229)
chr5 (84-150)||(21617927-21617993)
chr5 (68-122)||(31456975-31457029)
chr5 (239-301)||(33472716-33472778)
chr5 (202-298)||(17875896-17875993)
chr5 (202-301)||(36508859-36508959)
chr5 (239-297)||(27868727-27868785)
chr5 (68-122)||(30616629-30616683)
chr5 (202-298)||(30138199-30138296)
chr5 (84-122)||(6551289-6551327)
chr5 (239-297)||(9776947-9777005)
chr5 (239-301)||(18419289-18419351)
chr5 (84-122)||(21300043-21300081)
chr5 (202-267)||(31456721-31456787)
chr5 (239-297)||(37804225-37804283)
chr5 (239-297)||(41875745-41875803)
chr5 (74-123)||(21554292-21554341)
chr5 (85-122)||(36508633-36508670)
chr5 (241-297)||(24594218-24594274)
chr5 (241-297)||(24668312-24668368)
chr5 (241-297)||(24738081-24738137)
chr5 (241-297)||(24750850-24750906)
chr5 (84-115)||(18744896-18744927)
chr5 (89-119)||(7485020-7485050)
chr5 (84-122)||(20566561-20566599)
chr5 (243-301)||(21398956-21399014)
chr5 (68-118)||(21556932-21556982)
chr5 (84-116)||(31622138-31622170)
[»] scaffold0034 (1 HSPs)
scaffold0034 (74-301)||(29205-29432)
[»] chr1 (34 HSPs)
chr1 (74-301)||(46197734-46197961)
chr1 (68-301)||(50001312-50001545)
chr1 (74-301)||(29763621-29763848)
chr1 (68-122)||(51336494-51336548)
chr1 (68-122)||(12327726-12327780)
chr1 (200-301)||(34392601-34392704)
chr1 (239-297)||(297197-297255)
chr1 (200-301)||(8306440-8306542)
chr1 (202-301)||(21188149-21188249)
chr1 (84-122)||(7051921-7051959)
chr1 (200-301)||(17901916-17902018)
chr1 (239-301)||(22130178-22130240)
chr1 (84-122)||(24723350-24723388)
chr1 (202-267)||(44822246-44822312)
chr1 (239-297)||(45574172-45574230)
chr1 (85-122)||(19676726-19676763)
chr1 (85-122)||(21046049-21046086)
chr1 (202-301)||(7052129-7052229)
chr1 (229-301)||(24723604-24723676)
chr1 (241-296)||(23194667-23194722)
chr1 (84-122)||(13302917-13302955)
chr1 (84-122)||(16058313-16058351)
chr1 (84-122)||(21239048-21239086)
chr1 (200-301)||(21239157-21239259)
chr1 (84-122)||(42913064-42913102)
chr1 (84-121)||(4595852-4595889)
chr1 (239-295)||(28313192-28313248)
chr1 (250-301)||(6834002-6834053)
chr1 (85-115)||(22145666-22145696)
chr1 (74-112)||(24007214-24007252)
chr1 (84-122)||(51324519-51324557)
chr1 (85-122)||(20633631-20633668)
chr1 (68-105)||(21995647-21995684)
chr1 (84-121)||(24727383-24727420)
[»] chr7 (77 HSPs)
chr7 (74-297)||(29052171-29052394)
chr7 (84-301)||(32160199-32160416)
chr7 (74-301)||(16549994-16550218)
chr7 (74-301)||(16615444-16615668)
chr7 (239-301)||(1856553-1856615)
chr7 (239-299)||(13917725-13917785)
chr7 (202-298)||(14274062-14274159)
chr7 (239-301)||(25926452-25926514)
chr7 (202-301)||(12754781-12754881)
chr7 (84-191)||(4071767-4071873)
chr7 (84-191)||(15289052-15289158)
chr7 (239-301)||(4325933-4325995)
chr7 (200-301)||(13315195-13315297)
chr7 (84-150)||(35771440-35771506)
chr7 (84-170)||(48807324-48807410)
chr7 (84-122)||(12127162-12127200)
chr7 (84-122)||(12754611-12754649)
chr7 (239-297)||(14105580-14105638)
chr7 (239-297)||(14415597-14415655)
chr7 (239-297)||(16108011-16108069)
chr7 (84-122)||(20586367-20586405)
chr7 (239-297)||(23664275-23664333)
chr7 (239-301)||(44190369-44190431)
chr7 (85-122)||(8851159-8851196)
chr7 (239-296)||(11304030-11304087)
chr7 (85-122)||(12372289-12372326)
chr7 (85-122)||(12465260-12465297)
chr7 (85-122)||(13147472-13147509)
chr7 (85-122)||(16078345-16078382)
chr7 (84-171)||(14218894-14218981)
chr7 (211-285)||(36300766-36300841)
chr7 (84-122)||(4690662-4690700)
chr7 (239-301)||(13648119-13648181)
chr7 (239-297)||(14188446-14188504)
chr7 (239-297)||(16462910-16462968)
chr7 (200-301)||(19282882-19282984)
chr7 (200-301)||(38295438-38295540)
chr7 (202-295)||(42565948-42566042)
chr7 (84-122)||(47974819-47974857)
chr7 (85-122)||(11067483-11067520)
chr7 (85-122)||(12322930-12322967)
chr7 (239-296)||(17505117-17505174)
chr7 (239-296)||(17548040-17548097)
chr7 (68-105)||(19485956-19485993)
chr7 (85-122)||(20620301-20620338)
chr7 (85-122)||(32433589-32433626)
chr7 (85-122)||(33002168-33002205)
chr7 (199-301)||(18570481-18570584)
chr7 (202-301)||(47975007-47975107)
chr7 (84-115)||(8488093-8488124)
chr7 (84-115)||(8513752-8513783)
chr7 (84-115)||(16250221-16250252)
chr7 (258-301)||(19195028-19195071)
chr7 (258-297)||(29797392-29797431)
chr7 (258-297)||(29801211-29801250)
chr7 (68-123)||(30820134-30820189)
chr7 (89-119)||(10277345-10277375)
chr7 (84-122)||(10658850-10658888)
chr7 (239-297)||(11661947-11662005)
chr7 (239-301)||(13256530-13256592)
chr7 (84-122)||(14180397-14180435)
chr7 (86-160)||(14928290-14928364)
chr7 (84-122)||(15095636-15095674)
chr7 (86-160)||(15351756-15351830)
chr7 (85-119)||(16999454-16999488)
chr7 (84-122)||(18955345-18955383)
chr7 (84-118)||(20214166-20214200)
chr7 (84-122)||(24269946-24269984)
chr7 (243-297)||(25942312-25942366)
chr7 (239-301)||(39431340-39431402)
chr7 (85-115)||(43276744-43276774)
chr7 (84-122)||(44374858-44374896)
chr7 (84-122)||(44383723-44383761)
chr7 (84-122)||(46386087-46386125)
chr7 (85-122)||(18074647-18074684)
chr7 (200-283)||(8930881-8930965)
chr7 (68-100)||(46579742-46579774)
[»] chr3 (66 HSPs)
chr3 (74-301)||(16979748-16979975)
chr3 (85-301)||(22652609-22652825)
chr3 (200-300)||(45803451-45803552)
chr3 (239-301)||(5224160-5224222)
chr3 (200-298)||(13522463-13522561)
chr3 (239-301)||(26054587-26054649)
chr3 (165-301)||(48043557-48043694)
chr3 (239-301)||(15465932-15465994)
chr3 (165-301)||(25201972-25202107)
chr3 (68-125)||(36528879-36528936)
chr3 (200-299)||(48631170-48631270)
chr3 (69-122)||(15446852-15446905)
chr3 (201-301)||(3527270-3527372)
chr3 (239-297)||(13437080-13437138)
chr3 (239-301)||(43549808-43549870)
chr3 (68-125)||(3263946-3264003)
chr3 (239-297)||(42369-42427)
chr3 (239-297)||(3803655-3803713)
chr3 (84-122)||(5200242-5200280)
chr3 (239-297)||(12305904-12305962)
chr3 (84-122)||(16050942-16050980)
chr3 (84-122)||(19568207-19568245)
chr3 (68-122)||(24177719-24177773)
chr3 (239-297)||(29544186-29544244)
chr3 (84-122)||(40808011-40808049)
chr3 (84-122)||(40812848-40812886)
chr3 (84-122)||(44274433-44274471)
chr3 (239-297)||(46722739-46722797)
chr3 (239-297)||(55291754-55291812)
chr3 (85-122)||(17044981-17045018)
chr3 (85-122)||(17047141-17047178)
chr3 (85-122)||(17541449-17541486)
chr3 (85-122)||(22306583-22306620)
chr3 (239-298)||(6820010-6820069)
chr3 (239-297)||(10555148-10555206)
chr3 (84-122)||(11563740-11563778)
chr3 (88-122)||(11885560-11885594)
chr3 (84-122)||(13185910-13185948)
chr3 (84-122)||(15566759-15566797)
chr3 (84-122)||(17518872-17518910)
chr3 (84-122)||(17533734-17533772)
chr3 (239-297)||(18890265-18890323)
chr3 (84-122)||(33565102-33565140)
chr3 (84-122)||(49900745-49900783)
chr3 (239-297)||(54521604-54521662)
chr3 (85-122)||(11259446-11259483)
chr3 (68-105)||(37641487-37641524)
chr3 (202-297)||(6805043-6805139)
chr3 (166-213)||(21845732-21845778)
chr3 (84-119)||(35960927-35960962)
chr3 (202-267)||(3160742-3160808)
chr3 (84-122)||(9510915-9510953)
chr3 (84-122)||(9518890-9518928)
chr3 (89-119)||(10311545-10311575)
chr3 (84-122)||(10563723-10563761)
chr3 (88-122)||(14508862-14508896)
chr3 (68-118)||(14967203-14967253)
chr3 (239-297)||(16324693-16324751)
chr3 (239-301)||(43929228-43929290)
chr3 (85-122)||(15931508-15931545)
chr3 (85-122)||(17539121-17539158)
chr3 (89-122)||(17694082-17694115)
chr3 (85-122)||(41172371-41172408)
chr3 (68-105)||(52465354-52465391)
chr3 (74-123)||(52988847-52988896)
chr3 (200-267)||(12155141-12155209)
[»] chr2 (49 HSPs)
chr2 (68-301)||(21080952-21081185)
chr2 (68-301)||(25184025-25184258)
chr2 (68-301)||(21915460-21915693)
chr2 (93-301)||(18357975-18358183)
chr2 (200-300)||(12626546-12626647)
chr2 (68-122)||(357896-357950)
chr2 (200-301)||(19647070-19647172)
chr2 (239-301)||(31345957-31346019)
chr2 (74-122)||(40912335-40912383)
chr2 (165-297)||(36734530-36734664)
chr2 (202-297)||(1383768-1383864)
chr2 (84-152)||(22501956-22502024)
chr2 (84-152)||(22509890-22509958)
chr2 (202-301)||(45535762-45535862)
chr2 (200-301)||(149620-149722)
chr2 (84-158)||(14694305-14694379)
chr2 (239-297)||(23338552-23338610)
chr2 (84-122)||(17307501-17307539)
chr2 (84-122)||(24516201-24516239)
chr2 (84-122)||(25142219-25142257)
chr2 (84-122)||(27852683-27852721)
chr2 (239-301)||(41301082-41301144)
chr2 (85-122)||(2523747-2523784)
chr2 (85-122)||(5031129-5031166)
chr2 (85-122)||(24780840-24780877)
chr2 (211-267)||(45535666-45535722)
chr2 (84-122)||(3539852-3539890)
chr2 (239-297)||(10684085-10684143)
chr2 (239-297)||(13100887-13100945)
chr2 (239-297)||(20262001-20262059)
chr2 (239-297)||(21072841-21072899)
chr2 (202-267)||(24884231-24884297)
chr2 (211-297)||(28652677-28652763)
chr2 (239-297)||(43707200-43707258)
chr2 (85-122)||(9975944-9975981)
chr2 (68-105)||(34858175-34858212)
chr2 (68-105)||(34873237-34873274)
chr2 (74-110)||(27484478-27484514)
chr2 (87-122)||(1383545-1383580)
chr2 (258-301)||(28345209-28345252)
chr2 (68-103)||(34491223-34491258)
chr2 (84-122)||(19201199-19201237)
chr2 (239-297)||(20590435-20590493)
chr2 (84-122)||(25046133-25046171)
chr2 (89-119)||(37270717-37270747)
chr2 (84-122)||(44072572-44072610)
chr2 (85-122)||(24436663-24436700)
chr2 (211-267)||(22501730-22501786)
chr2 (211-267)||(22509664-22509720)
[»] chr8 (48 HSPs)
chr8 (74-301)||(16198672-16198899)
chr8 (68-301)||(23478918-23479151)
chr8 (68-297)||(19880663-19880891)
chr8 (69-297)||(26454546-26454776)
chr8 (84-301)||(25657513-25657730)
chr8 (74-224)||(17158952-17159102)
chr8 (211-297)||(22483620-22483706)
chr8 (239-296)||(14397063-14397120)
chr8 (200-299)||(20879311-20879411)
chr8 (200-285)||(22610380-22610466)
chr8 (200-285)||(23884021-23884107)
chr8 (200-301)||(36732598-36732700)
chr8 (74-115)||(12577901-12577942)
chr8 (84-122)||(4380616-4380654)
chr8 (84-122)||(5761548-5761586)
chr8 (239-297)||(8413901-8413959)
chr8 (84-122)||(17906848-17906886)
chr8 (84-122)||(20022039-20022077)
chr8 (84-122)||(22532131-22532169)
chr8 (84-122)||(22536816-22536854)
chr8 (84-150)||(23899986-23900052)
chr8 (202-298)||(20517172-20517269)
chr8 (211-267)||(21676717-21676773)
chr8 (239-298)||(25483594-25483653)
chr8 (84-122)||(6101752-6101790)
chr8 (243-297)||(19882789-19882843)
chr8 (84-122)||(20397509-20397547)
chr8 (84-122)||(22254781-22254819)
chr8 (84-122)||(31722492-31722530)
chr8 (84-122)||(36727037-36727075)
chr8 (84-122)||(45469218-45469256)
chr8 (85-122)||(18761463-18761500)
chr8 (85-122)||(20083638-20083675)
chr8 (202-294)||(22344966-22345059)
chr8 (202-294)||(22356626-22356719)
chr8 (85-122)||(39936007-39936044)
chr8 (85-122)||(42817907-42817944)
chr8 (84-115)||(22610266-22610297)
chr8 (68-115)||(41680116-41680163)
chr8 (85-123)||(17218716-17218754)
chr8 (84-122)||(19700176-19700214)
chr8 (84-122)||(22317910-22317948)
chr8 (84-122)||(23419456-23419494)
chr8 (89-119)||(34758885-34758915)
chr8 (89-119)||(37292723-37292753)
chr8 (89-122)||(6573060-6573093)
chr8 (85-122)||(19140780-19140816)
chr8 (68-100)||(22237033-22237065)
[»] chr6 (38 HSPs)
chr6 (68-301)||(15900637-15900870)
chr6 (68-301)||(15173436-15173669)
chr6 (145-301)||(15891629-15891785)
chr6 (239-301)||(23415742-23415804)
chr6 (243-301)||(27557500-27557558)
chr6 (200-301)||(29045100-29045202)
chr6 (200-285)||(1818804-1818890)
chr6 (68-119)||(27329964-27330015)
chr6 (68-119)||(27390704-27390755)
chr6 (239-297)||(13765188-13765246)
chr6 (84-122)||(15890711-15890749)
chr6 (239-297)||(23956704-23956762)
chr6 (239-297)||(28288659-28288717)
chr6 (239-297)||(31021874-31021932)
chr6 (85-122)||(7827987-7828024)
chr6 (85-122)||(23150287-23150324)
chr6 (239-295)||(23226010-23226066)
chr6 (86-122)||(24267864-24267900)
chr6 (239-297)||(12942971-12943029)
chr6 (84-122)||(15998904-15998942)
chr6 (202-267)||(18585549-18585615)
chr6 (88-122)||(18585820-18585854)
chr6 (84-122)||(18928696-18928734)
chr6 (84-122)||(28948590-28948628)
chr6 (84-122)||(31731903-31731941)
chr6 (85-122)||(18703583-18703620)
chr6 (85-122)||(18709518-18709555)
chr6 (85-122)||(19655231-19655268)
chr6 (85-122)||(27125477-27125514)
chr6 (85-122)||(27572122-27572159)
chr6 (74-123)||(27852220-27852269)
chr6 (68-104)||(28103431-28103467)
chr6 (239-298)||(20556185-20556244)
chr6 (215-301)||(10446048-10446134)
chr6 (84-122)||(12041619-12041657)
chr6 (89-119)||(29625201-29625231)
chr6 (85-122)||(19401109-19401146)
chr6 (84-116)||(30673401-30673433)
[»] chr4 (43 HSPs)
chr4 (85-301)||(10694245-10694461)
chr4 (68-301)||(40620368-40620601)
chr4 (85-295)||(10908011-10908221)
chr4 (68-301)||(15008804-15009032)
chr4 (165-301)||(35660724-35660862)
chr4 (200-294)||(9622330-9622425)
chr4 (68-122)||(14186973-14187027)
chr4 (200-301)||(16296707-16296809)
chr4 (202-301)||(19434775-19434875)
chr4 (84-122)||(15115237-15115275)
chr4 (84-122)||(19434558-19434596)
chr4 (84-122)||(21062656-21062694)
chr4 (239-297)||(28386085-28386143)
chr4 (239-297)||(33849584-33849642)
chr4 (239-297)||(36038652-36038710)
chr4 (239-297)||(49547096-49547154)
chr4 (85-122)||(11425958-11425995)
chr4 (85-122)||(25091668-25091705)
chr4 (85-122)||(35811376-35811413)
chr4 (85-122)||(53630474-53630511)
chr4 (202-301)||(14549486-14549586)
chr4 (68-123)||(10057675-10057730)
chr4 (239-298)||(15344775-15344834)
chr4 (84-122)||(2424386-2424424)
chr4 (84-122)||(9924169-9924207)
chr4 (84-122)||(14549775-14549813)
chr4 (239-297)||(15534963-15535021)
chr4 (239-297)||(16277440-16277498)
chr4 (239-301)||(18230578-18230640)
chr4 (239-297)||(53387050-53387108)
chr4 (85-122)||(10356436-10356473)
chr4 (84-160)||(11478652-11478728)
chr4 (202-301)||(18462859-18462959)
chr4 (239-298)||(12611751-12611810)
chr4 (89-119)||(6633541-6633571)
chr4 (84-122)||(14186067-14186105)
chr4 (202-267)||(14477502-14477568)
chr4 (84-122)||(15613105-15613143)
chr4 (84-122)||(37019685-37019723)
chr4 (84-122)||(51993576-51993614)
chr4 (85-122)||(16998540-16998577)
chr4 (85-122)||(19610339-19610376)
chr4 (85-122)||(42875812-42875849)
[»] scaffold0436 (1 HSPs)
scaffold0436 (74-301)||(8796-9023)
[»] scaffold0083 (3 HSPs)
scaffold0083 (74-301)||(1773-2000)
scaffold0083 (84-122)||(5044-5082)
scaffold0083 (84-122)||(10754-10792)
[»] scaffold0046 (1 HSPs)
scaffold0046 (74-301)||(21766-21993)
[»] scaffold0515 (1 HSPs)
scaffold0515 (74-296)||(4877-5092)
[»] scaffold0306 (1 HSPs)
scaffold0306 (74-296)||(4877-5092)
[»] scaffold0462 (1 HSPs)
scaffold0462 (68-301)||(11059-11292)
[»] scaffold0061 (2 HSPs)
scaffold0061 (166-297)||(14667-14798)
scaffold0061 (166-297)||(23725-23856)
[»] scaffold0058 (3 HSPs)
scaffold0058 (68-217)||(6288-6437)
scaffold0058 (239-301)||(39965-40027)
scaffold0058 (202-267)||(59771-59837)
[»] scaffold0439 (1 HSPs)
scaffold0439 (200-298)||(12080-12178)
[»] scaffold0035 (2 HSPs)
scaffold0035 (165-301)||(43866-44003)
scaffold0035 (165-301)||(39174-39311)
[»] scaffold0200 (1 HSPs)
scaffold0200 (239-301)||(18431-18493)
[»] scaffold0113 (2 HSPs)
scaffold0113 (211-301)||(35328-35418)
scaffold0113 (84-122)||(35505-35543)
[»] scaffold0293 (1 HSPs)
scaffold0293 (239-299)||(19452-19512)
[»] scaffold0117 (1 HSPs)
scaffold0117 (239-301)||(42509-42571)
[»] scaffold0205 (1 HSPs)
scaffold0205 (165-301)||(5695-5832)
[»] scaffold0086 (1 HSPs)
scaffold0086 (165-301)||(35565-35702)
[»] scaffold0026 (2 HSPs)
scaffold0026 (202-301)||(21958-22058)
scaffold0026 (84-122)||(146738-146776)
[»] scaffold0453 (1 HSPs)
scaffold0453 (239-297)||(7163-7221)
[»] scaffold0051 (1 HSPs)
scaffold0051 (239-301)||(31981-32042)
[»] scaffold0071 (1 HSPs)
scaffold0071 (69-122)||(15287-15340)
[»] scaffold0555 (1 HSPs)
scaffold0555 (213-297)||(8925-9009)
[»] scaffold0037 (2 HSPs)
scaffold0037 (83-170)||(117805-117893)
scaffold0037 (84-170)||(112965-113052)
[»] scaffold0802 (1 HSPs)
scaffold0802 (84-150)||(4708-4774)
[»] scaffold0031 (1 HSPs)
scaffold0031 (200-301)||(127459-127561)
[»] scaffold0001 (5 HSPs)
scaffold0001 (239-297)||(169281-169339)
scaffold0001 (239-297)||(176634-176692)
scaffold0001 (84-122)||(77702-77740)
scaffold0001 (85-122)||(32009-32046)
scaffold0001 (85-122)||(37316-37353)
[»] scaffold1941 (1 HSPs)
scaffold1941 (84-122)||(153-191)
[»] scaffold0956 (2 HSPs)
scaffold0956 (239-301)||(2248-2310)
scaffold0956 (88-122)||(2570-2604)
[»] scaffold0594 (1 HSPs)
scaffold0594 (200-301)||(2076-2178)
[»] scaffold0422 (1 HSPs)
scaffold0422 (239-297)||(3805-3863)
[»] scaffold0364 (1 HSPs)
scaffold0364 (239-297)||(8005-8063)
[»] scaffold0220 (1 HSPs)
scaffold0220 (84-122)||(19969-20007)
[»] scaffold0203 (1 HSPs)
scaffold0203 (84-122)||(17939-17977)
[»] scaffold0151 (1 HSPs)
scaffold0151 (239-301)||(9932-9994)
[»] scaffold0021 (2 HSPs)
scaffold0021 (202-267)||(16977-17043)
scaffold0021 (202-267)||(26508-26574)
[»] scaffold1633 (1 HSPs)
scaffold1633 (85-122)||(1220-1257)
[»] scaffold1283 (1 HSPs)
scaffold1283 (85-122)||(468-505)
[»] scaffold0601 (1 HSPs)
scaffold0601 (85-122)||(196-233)
[»] scaffold0064 (1 HSPs)
scaffold0064 (85-122)||(58761-58798)
[»] scaffold0036 (1 HSPs)
scaffold0036 (85-122)||(78185-78222)
[»] scaffold0019 (1 HSPs)
scaffold0019 (85-122)||(24131-24168)
[»] scaffold0004 (4 HSPs)
scaffold0004 (200-301)||(66194-66294)
scaffold0004 (84-118)||(328287-328321)
scaffold0004 (89-150)||(110161-110222)
scaffold0004 (85-115)||(73109-73139)
[»] scaffold1939 (1 HSPs)
scaffold1939 (200-263)||(1-65)
[»] scaffold0217 (1 HSPs)
scaffold0217 (202-301)||(28550-28650)
[»] scaffold0577 (1 HSPs)
scaffold0577 (68-123)||(9073-9128)
[»] scaffold0077 (2 HSPs)
scaffold0077 (85-120)||(34356-34391)
scaffold0077 (84-122)||(5965-6003)
[»] scaffold1766 (1 HSPs)
scaffold1766 (84-122)||(695-733)
[»] scaffold1276 (1 HSPs)
scaffold1276 (239-301)||(977-1039)
[»] scaffold1256 (1 HSPs)
scaffold1256 (84-122)||(2199-2237)
[»] scaffold0819 (1 HSPs)
scaffold0819 (68-122)||(5381-5435)
[»] scaffold0676 (1 HSPs)
scaffold0676 (200-301)||(2650-2752)
[»] scaffold0632 (1 HSPs)
scaffold0632 (68-122)||(1180-1234)
[»] scaffold0628 (1 HSPs)
scaffold0628 (84-122)||(1057-1095)
[»] scaffold0516 (1 HSPs)
scaffold0516 (84-122)||(5304-5342)
[»] scaffold0334 (2 HSPs)
scaffold0334 (84-122)||(533-571)
scaffold0334 (239-301)||(1962-2024)
[»] scaffold0241 (1 HSPs)
scaffold0241 (84-122)||(3197-3235)
[»] scaffold0230 (2 HSPs)
scaffold0230 (88-122)||(6688-6722)
scaffold0230 (202-267)||(6910-6976)
[»] scaffold0213 (1 HSPs)
scaffold0213 (84-122)||(19222-19260)
[»] scaffold0207 (1 HSPs)
scaffold0207 (84-122)||(13391-13429)
[»] scaffold0149 (3 HSPs)
scaffold0149 (211-301)||(21376-21466)
scaffold0149 (84-122)||(21626-21664)
scaffold0149 (84-122)||(29572-29610)
[»] scaffold0148 (1 HSPs)
scaffold0148 (200-301)||(8677-8779)
[»] scaffold0111 (2 HSPs)
scaffold0111 (88-122)||(5398-5432)
scaffold0111 (86-122)||(12534-12570)
[»] scaffold0070 (1 HSPs)
scaffold0070 (239-297)||(8932-8990)
[»] scaffold0040 (1 HSPs)
scaffold0040 (84-122)||(106050-106088)
[»] scaffold0032 (1 HSPs)
scaffold0032 (84-122)||(61847-61885)
[»] scaffold0020 (2 HSPs)
scaffold0020 (84-122)||(168998-169036)
scaffold0020 (85-122)||(143626-143663)
[»] scaffold0737 (1 HSPs)
scaffold0737 (85-122)||(4714-4751)
[»] scaffold0407 (1 HSPs)
scaffold0407 (85-122)||(11274-11311)
[»] scaffold0153 (2 HSPs)
scaffold0153 (68-105)||(5329-5366)
scaffold0153 (68-105)||(12349-12386)
[»] scaffold0139 (1 HSPs)
scaffold0139 (74-115)||(23556-23597)
[»] scaffold0047 (1 HSPs)
scaffold0047 (85-122)||(79064-79101)
[»] scaffold0007 (1 HSPs)
scaffold0007 (202-298)||(18976-19073)
[»] scaffold0156 (1 HSPs)
scaffold0156 (74-122)||(16619-16667)
[»] scaffold0041 (1 HSPs)
scaffold0041 (90-122)||(5712-5744)
[»] scaffold1439 (1 HSPs)
scaffold1439 (239-298)||(916-975)
[»] scaffold0256 (1 HSPs)
scaffold0256 (83-122)||(1845-1884)
[»] scaffold0671 (1 HSPs)
scaffold0671 (84-122)||(4955-4993)
[»] scaffold0285 (1 HSPs)
scaffold0285 (84-122)||(19768-19806)
[»] scaffold0175 (1 HSPs)
scaffold0175 (84-122)||(8657-8695)
[»] scaffold0106 (1 HSPs)
scaffold0106 (243-301)||(21821-21879)
[»] scaffold0092 (1 HSPs)
scaffold0092 (202-267)||(38558-38624)
[»] scaffold0056 (1 HSPs)
scaffold0056 (84-122)||(67136-67174)
[»] scaffold0016 (1 HSPs)
scaffold0016 (239-301)||(174261-174323)
[»] scaffold0010 (1 HSPs)
scaffold0010 (84-122)||(126304-126341)
[»] scaffold0008 (1 HSPs)
scaffold0008 (84-122)||(135503-135541)
[»] scaffold0080 (1 HSPs)
scaffold0080 (85-122)||(21793-21830)
[»] scaffold0686 (1 HSPs)
scaffold0686 (68-100)||(1475-1507)
[»] scaffold0174 (1 HSPs)
scaffold0174 (71-115)||(5476-5520)
[»] scaffold0112 (1 HSPs)
scaffold0112 (84-116)||(2910-2942)
[»] scaffold0104 (2 HSPs)
scaffold0104 (74-122)||(14972-15020)
scaffold0104 (74-122)||(16992-17040)


Alignment Details
Target: scaffold0057 (Bit Score: 196; Significance: 1e-107; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 74 - 301
Target Start/End: Original strand, 69842 - 70069
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaattttgatg 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||| ||||||||||||||    
T  69842 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatg 69941  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagag 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| | ||    
T  69942 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaaaaaaaatag 70041  T
Q  274 gttgagtttcctatcaaatttgggattt 301  Q
    ||||||||||||||||||||||||||||    
T  70042 gttgagtttcctatcaaatttgggattt 70069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 72336 - 72277
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||| ||| |||||||||||    
T  72336 taagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggga 72277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 194; Significance: 1e-105; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 68 - 301
Target Start/End: Complemental strand, 21166 - 20933
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaatt 167  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||| | |||||||||||||||| ||||||||    
T  21166 ccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaatt 21067  T
Q  168 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  21066 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 20967  T
Q  268 acagaggttgagtttcctatcaaatttgggattt 301  Q
    ||| ||||||||||||||||||||||||||||||    
T  20966 acataggttgagtttcctatcaaatttgggattt 20933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 68 - 301
Target Start/End: Complemental strand, 34181 - 33949
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaatt 167  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||| | |||||||||||||||| ||||||||    
T  34181 ccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaatt 34082  T
Q  168 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||| | |||||||||    
T  34081 ttgatgattagagaaattaggttttggtttggaattgattgttaaacagtaggtaattcaatgaattaacataagaattgaagttcagaccgtagaataa 33982  T
Q  268 acagaggttgagtttcctatcaaatttgggattt 301  Q
    ||| ||||||||||||||| |||||||| |||||    
T  33981 acataggttgagtttccta-caaatttgagattt 33949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 194; Significance: 1e-105; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 68 - 301
Target Start/End: Complemental strand, 17011797 - 17011564
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaatt 167  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||| | |||||||||||||||| ||||||||    
T  17011797 ccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaatt 17011698  T
Q  168 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  17011697 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 17011598  T
Q  268 acagaggttgagtttcctatcaaatttgggattt 301  Q
    ||| ||||||||||||||||||||||||||||||    
T  17011597 acataggttgagtttcctatcaaatttgggattt 17011564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 85 - 301
Target Start/End: Complemental strand, 266090 - 265874
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaattttgatgattagagaaat 184  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | |||||||||||||||| |||||||||||||||||||||||||    
T  266090 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactggatttaacatgatgtaggtggtaattttgatgattagagaaat 265991  T
Q  185 taggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcc 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  265990 taggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcc 265891  T
Q  285 tatcaaatttgggattt 301  Q
    |||||||||||||||||    
T  265890 tatcaaatttgggattt 265874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 74 - 301
Target Start/End: Complemental strand, 29448903 - 29448676
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaattttgatg 173  Q
    ||||||||||||||||||| | || ||||||||||||||||||||||||||||| | ||||||||| | |||||||||||||||| ||||||||||||||    
T  29448903 atcatcaatactaaggtaatgatgagactaactttctctaattctaagtaatttaattctgaaaactggatttaacatgatgtaggtggtaattttgatg 29448804  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagag 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  29448803 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaaaccaatgaattaacataagaattgaagttcaggctgtagaataaacatag 29448704  T
Q  274 gttgagtttcctatcaaatttgggattt 301  Q
    |||||||||||||||||||||| |||||    
T  29448703 gttgagtttcctatcaaatttgagattt 29448676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 211 - 301
Target Start/End: Complemental strand, 21504065 - 21503975
Alignment:
Q  211 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    ||||||||||| ||||| |||||||||||||||| ||| ||||||| |||||||||| || ||||||||||||||||  ||||||||||||    
T  21504065 aaagagtaggtgatccaatgaattaacataagaactgatgttcaggttgtagaataatcataggttgagtttcctattgaatttgggattt 21503975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 301
Target Start/End: Complemental strand, 20313248 - 20313111
Alignment:
Q  165 attttgatgattagagaaattaggttttggtttggaattgattg-ttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtaga 263  Q
    ||||||||||||||||||||||| ||||| |||||||||||||| | ||| |||||  ||| || |||||||   ||  |||||| ||||| | | ||||    
T  20313248 attttgatgattagagaaattagattttgatttggaattgattgctaaaaaagtagagaattcaatgaattagtgtacaaattgatgttcaagttataga 20313149  T
Q  264 ataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    ||||||| || |||||||||||||  ||||||||||||    
T  20313148 ataaacatagattgagtttcctattgaatttgggattt 20313111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 122
Target Start/End: Original strand, 10774647 - 10774701
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  10774647 ccgccgatcatcaatactaaggtaagggtgggactaaccttcactaattctaagt 10774701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 20469175 - 20469229
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaa 138  Q
    ||||||||||||||||||||||||||||||||||||||| || | ||||||||||    
T  20469175 ctaaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaa 20469229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 21617927 - 21617993
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaaca 150  Q
    ||||||||||||||||||||||||||||||||||||||| || | ||||| ||||  ||||||||||    
T  21617927 ctaaggtaagggtgggactaactttctctaattctaagtgatataactctaaaaattgaatttaaca 21617993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 122
Target Start/End: Complemental strand, 31457029 - 31456975
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||| |||||    
T  31457029 ccgccgatcatcaatactaaggtaagggtgagactaactttctctaattttaagt 31456975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 33472716 - 33472778
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||||||    
T  33472716 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggattt 33472778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 202 - 298
Target Start/End: Complemental strand, 17875993 - 17875896
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||| |||| |||||||||||| |||||||||||| ||||||| ||||||| ||||||||||  | ||||   ||||| ||||||||||||||    
T  17875993 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaggttgtagaataacaataggtgatgtttcttatcaaatttggga 17875896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 36508859 - 36508959
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 300  Q
    ||||||||| |||||||||||||||   ||||||||  ||| |||||  ||| ||| |||||||||| || ||||| |||||||||||||||||||||||    
T  36508859 ttgattgttgaaagagtaggtaatctgatgaattaaggtaataattggtgtttaggttgtagaataatcataggttaagtttcctatcaaatttgggatt 36508958  T
Q  301 t 301  Q
    |    
T  36508959 t 36508959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 27868727 - 27868785
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  27868727 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 27868785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 122
Target Start/End: Complemental strand, 30616683 - 30616629
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||| |||||||||| || ||||||||||||||| |||||||||||||||||||    
T  30616683 ccgccgatcatcaatattatggtaagggtgggactgactttctctaattctaagt 30616629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 298
Target Start/End: Original strand, 30138199 - 30138296
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||| |||| ||||| |||||| |||||||||||| ||  ||| ||||||| |||||||||| || ||||| ||||||| | |||||||||||    
T  30138199 ttgattgttgaaagtgtaggcaatccaatgaattaacatatgatatgatgttcaggttgtagaataatcataggttaagtttccaaacaaatttggga 30138296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 6551289 - 6551327
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  6551289 ctaaggtaagggtgagactaactttctctaattctaagt 6551327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 9777005 - 9776947
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||  ||||||||||||| ||||| ||||||||||||||||||||    
T  9777005 taagaatcgatgttcagattgtagaataaacataggttaagtttcctatcaaatttggg 9776947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 18419351 - 18419289
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| ||||||| |||||||||| || || || |||||||||||||||||| |||||    
T  18419351 taagaattgatgttcaggttgtagaataatcatagattaagtttcctatcaaatttgagattt 18419289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 21300043 - 21300081
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  21300043 ctaaggtaagggtgggactaactttctctaattttaagt 21300081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 31456787 - 31456721
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||| |||| ||||||||| || |||||||||||| ||||||| ||||||| ||||||||||    
T  31456787 ttgattgttgaaagtgtaggtaattcaatgaattaacatatgaattgatgttcaggttgtagaataa 31456721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 37804225 - 37804283
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||  ||||||||||||| | ||||||||||||||||||||||||    
T  37804225 taagaatcgatgttcagattgtagaataaacatatgttgagtttcctatcaaatttggg 37804283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 41875745 - 41875803
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || |||||| ||||||||||| || ||||| ||||||||||||||||||||    
T  41875745 taagaatcgatgttcagactgtagaataatcataggttaagtttcctatcaaatttggg 41875803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 123
Target Start/End: Original strand, 21554292 - 21554341
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagta 123  Q
    |||||||||||||||||||||||||||||||| |||  ||||||| ||||    
T  21554292 atcatcaatactaaggtaagggtgggactaaccttcagtaattctgagta 21554341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 36508633 - 36508670
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  36508633 taaggtaagggtgagactaactttctctaattctaagt 36508670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 297
Target Start/End: Original strand, 24594218 - 24594274
Alignment:
Q  241 agaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||| |||||||  ||||||||| || ||||| ||||||||||||||||||||    
T  24594218 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 24594274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 297
Target Start/End: Original strand, 24668312 - 24668368
Alignment:
Q  241 agaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||| |||||||  ||||||||| || ||||| ||||||||||||||||||||    
T  24668312 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 24668368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 297
Target Start/End: Original strand, 24738081 - 24738137
Alignment:
Q  241 agaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||| |||||||  ||||||||| || ||||| ||||||||||||||||||||    
T  24738081 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 24738137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 297
Target Start/End: Original strand, 24750850 - 24750906
Alignment:
Q  241 agaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||| |||||||  ||||||||| || ||||| ||||||||||||||||||||    
T  24750850 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 24750906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 115
Target Start/End: Complemental strand, 18744927 - 18744896
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaat 115  Q
    ||||||||||||||||||||||||||||||||    
T  18744927 ctaaggtaagggtgggactaactttctctaat 18744896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 119
Target Start/End: Complemental strand, 7485050 - 7485020
Alignment:
Q  89 gtaagggtgggactaactttctctaattcta 119  Q
    |||||||||||||||||||||||||||||||    
T  7485050 gtaagggtgggactaactttctctaattcta 7485020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 20566599 - 20566561
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  20566599 ctaaggtaagggtgagactaactttctctaattcaaagt 20566561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 21398956 - 21399014
Alignment:
Q  243 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||| ||||||| ||||||||||||| |||  |||||| |||| |||||||||||||    
T  21398956 aattgatgttcaggttgtagaataaacataggaagagttttctataaaatttgggattt 21399014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 21556932 - 21556982
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattct 118  Q
    ||||| |||||||||||||||||||||||| ||||||| |||  |||||||    
T  21556932 ccgccgatcatcaatactaaggtaagggtgagactaaccttcagtaattct 21556982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 116
Target Start/End: Complemental strand, 31622170 - 31622138
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaatt 116  Q
    ||||||||||||||||| |||||||||||||||    
T  31622170 ctaaggtaagggtgggattaactttctctaatt 31622138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 74 - 301
Target Start/End: Original strand, 29205 - 29432
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaattttgatg 173  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||| | ||||||||| | |||||||||||||||||||||||||||||||    
T  29205 atcatcaatactaaggtaagagtgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtagatggtaattttgatg 29304  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagag 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||    
T  29305 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacatag 29404  T
Q  274 gttgagtttcctatcaaatttgggattt 301  Q
    ||||||||||||||||||||||||||||    
T  29405 gttgagtttcctatcaaatttgggattt 29432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 74 - 301
Target Start/End: Original strand, 46197734 - 46197961
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaattttgatg 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | |||||||||||| ||| ||||||||||||||    
T  46197734 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactggatttaacatgatttaggtggtaattttgatg 46197833  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagag 273  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  46197834 attagagaaattatgttttggtttggaattgattgttaaagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaataaacatag 46197933  T
Q  274 gttgagtttcctatcaaatttgggattt 301  Q
    ||||||||||||||||||||||||||||    
T  46197934 gttgagtttcctatcaaatttgggattt 46197961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 68 - 301
Target Start/End: Complemental strand, 50001545 - 50001312
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaatt 167  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | ||||||||| | |||||||||||||||| ||||||||    
T  50001545 ccgccgatcatcaatactaaggtaagggtgggactaactttctttaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaatt 50001446  T
Q  168 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  50001445 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 50001346  T
Q  268 acagaggttgagtttcctatcaaatttgggattt 301  Q
    ||| | ||||||||||||||||||||| ||||||    
T  50001345 acatatgttgagtttcctatcaaattttggattt 50001312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 74 - 301
Target Start/End: Original strand, 29763621 - 29763848
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaattttgatg 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||| | |||||||||||||||| ||||||||||||||    
T  29763621 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaattttgatg 29763720  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagag 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| || |||||||||||||| |     
T  29763721 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatacaatgaattaacataagaattgaagtttagactgtagaataaacataa 29763820  T
Q  274 gttgagtttcctatcaaatttgggattt 301  Q
    ||||||||||||||||||||||||||||    
T  29763821 gttgagtttcctatcaaatttgggattt 29763848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 122
Target Start/End: Complemental strand, 51336548 - 51336494
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  51336548 ccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagt 51336494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 68 - 122
Target Start/End: Original strand, 12327726 - 12327780
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12327726 ccgccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagt 12327780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 200 - 301
Target Start/End: Complemental strand, 34392704 - 34392601
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggct-gtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||||||| ||||||||||||||||| ||||||||| |||| | ||| ||||||  | |||||||||||| |||||||||||||| |  ||||||||    
T  34392704 aattgattgttgaaagagtaggtaatccattgaattaacgtaaggaatgaggttcagaattgtagaataaacataggttgagtttccttttgaatttggg 34392605  T
Q  298 attt 301  Q
    ||||    
T  34392604 attt 34392601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 297255 - 297197
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  297255 taagaatcgatgttcaggttgtagaataaacataggttgagtttcctatcaaatttggg 297197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 301
Target Start/End: Complemental strand, 8306542 - 8306440
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| ||||||||||||||||  ||||||||  ||| |||||  ||||||  ||| |||||| || ||||| |||||||||||||||||||||    
T  8306542 aattgattgttgaaagagtaggtaatccgatgaattaaggtaataattggtgttcagattgttgaataatcataggttaagtttcctatcaaatttggga 8306443  T
Q  299 ttt 301  Q
    |||    
T  8306442 ttt 8306440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 21188149 - 21188249
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 300  Q
    ||||||||| |||| |||||||||||| |||||||| |||| |||||| ||||||| ||||||||||  | | ||   ||||||||||||||||||||||    
T  21188149 ttgattgttgaaagtgtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataagaatatgtaatgtttcctatcaaatttgggatt 21188248  T
Q  301 t 301  Q
    |    
T  21188249 t 21188249  T

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Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 7051921 - 7051959
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7051921 ctaaggtaagggtgggactaactttctctaattctaagt 7051959  T

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Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 301
Target Start/End: Original strand, 17901916 - 17902018
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| ||||||||| ||||||  |||| |||  ||| |||||  ||||||| |||||||||| || |||| |||||| |||||||||||||||    
T  17901916 aattgattgttgaaagagtagataatccgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaatttggga 17902015  T
Q  299 ttt 301  Q
    |||    
T  17902016 ttt 17902018  T

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Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 22130178 - 22130240
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| ||| ||| |||||||||| || ||||| ||||||||||||||||||||||||    
T  22130178 taagaattgatgttaaggttgtagaataatcataggttaagtttcctatcaaatttgggattt 22130240  T

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Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 24723350 - 24723388
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24723350 ctaaggtaagggtgggactaactttctctaattctaagt 24723388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 267
Target Start/End: Original strand, 44822246 - 44822312
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||| |||| |||||||||||| |||||||||||| ||||||| ||||||| ||||||||||    
T  44822246 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaggttgtagaataa 44822312  T

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Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 45574172 - 45574230
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  45574172 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 45574230  T

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Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 19676763 - 19676726
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19676763 taaggtaagggtgggactaactttctctaattctaagt 19676726  T

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Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 21046049 - 21046086
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21046049 taaggtaagggtgggactaactttctctaattctaagt 21046086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 7052129 - 7052229
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 300  Q
    ||||||||| |||||||||||||||   ||||||||  ||| |||||  ||||||| |||| ||||| || ||||| |||||||||||| ||||||||||    
T  7052129 ttgattgttgaaagagtaggtaatctgatgaattaaggtaataattggtgttcaggttgtaaaataatcataggttaagtttcctatcatatttgggatt 7052228  T
Q  301 t 301  Q
    |    
T  7052229 t 7052229  T

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Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 229 - 301
Target Start/End: Original strand, 24723604 - 24723676
Alignment:
Q  229 tgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    ||||||||  ||| |||||  ||||||| |||||||||| || ||||| ||||||||||||||||||||||||    
T  24723604 tgaattaaggtaataattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggattt 24723676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 296
Target Start/End: Original strand, 23194667 - 23194722
Alignment:
Q  241 agaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgg 296  Q
    |||||||| ||||||| |||||||||| || ||||| |||||||||||||||||||    
T  23194667 agaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 23194722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 13302955 - 13302917
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  13302955 ctaaggtaagggtgagactaactttctctaattctaagt 13302917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 16058313 - 16058351
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  16058313 ctaaggtaagggtgggactaaatttctctaattctaagt 16058351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 21239048 - 21239086
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  21239048 ctaaggtatgggtgggactaactttctctaattctaagt 21239086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 301
Target Start/End: Original strand, 21239157 - 21239259
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| ||||||||||||||||  |||| |||  ||| |||||  ||||||  |||||||||| || |||| |||||| ||||||||||| |||    
T  21239157 aattgattgttgaaagagtaggtaatccgatgaactaaggtaataattggtgttcagtttgtagaataatcataggtagagttttctatcaaatttagga 21239256  T
Q  299 ttt 301  Q
    |||    
T  21239257 ttt 21239259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 42913102 - 42913064
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  42913102 ctaaggtaagggtgagactaactttctctaattctaagt 42913064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 121
Target Start/End: Original strand, 4595852 - 4595889
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaag 121  Q
    |||||||||||||| |||||||||||||||||||||||    
T  4595852 ctaaggtaagggtgagactaactttctctaattctaag 4595889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 28313248 - 28313192
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttg 295  Q
    |||||||||| ||||||| ||| |||||| || ||||| ||||||||||||||||||    
T  28313248 taagaattgatgttcaggttgtggaataatcataggttaagtttcctatcaaatttg 28313192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 301
Target Start/End: Complemental strand, 6834053 - 6834002
Alignment:
Q  250 gttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    ||||||| |||||||||| || |||| |||||| ||||||||||||||||||    
T  6834053 gttcaggttgtagaataatcataggtagagttttctatcaaatttgggattt 6834002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 115
Target Start/End: Original strand, 22145666 - 22145696
Alignment:
Q  85 taaggtaagggtgggactaactttctctaat 115  Q
    |||||||||||||||||||||||||||||||    
T  22145666 taaggtaagggtgggactaactttctctaat 22145696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 112
Target Start/End: Original strand, 24007214 - 24007252
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctct 112  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  24007214 atcatctatactaaggtaagggtgggactagctttctct 24007252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 51324557 - 51324519
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  51324557 ctaaggtaagggtgagactaactttccctaattctaagt 51324519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 20633631 - 20633668
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  20633631 taagataagggtgggactaacttgctctaattctaagt 20633668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 105
Target Start/End: Original strand, 21995647 - 21995684
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaac 105  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  21995647 ccgccgatcatcaatactaagataagggtgggactaac 21995684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 121
Target Start/End: Complemental strand, 24727420 - 24727383
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaag 121  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  24727420 ctaaggtaagggtgggactaaccttctttaattctaag 24727383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 184; Significance: 1e-99; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 74 - 297
Target Start/End: Original strand, 29052171 - 29052394
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaattttgatg 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||| | |||||||||||||||| ||||||||||||||    
T  29052171 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaattttgatg 29052270  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagag 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||| ||    
T  29052271 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaattaattaacataagaattgaagttcaggctgtagaataaacatag 29052370  T
Q  274 gttgagtttcctatcaaatttggg 297  Q
    ||||||||||||||||||||||||    
T  29052371 gttgagtttcctatcaaatttggg 29052394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 84 - 301
Target Start/End: Original strand, 32160199 - 32160416
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaattttgatgattagagaaa 183  Q
    |||||||||||||  ||||||||||||||||||||||||||||| | ||||||||| | |||||||||||||||| || |||||||||||||||||||||    
T  32160199 ctaaggtaagggtaagactaactttctctaattctaagtaatttaattctgaaaactggatttaacatgatgtaggtgataattttgatgattagagaaa 32160298  T
Q  184 ttaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttc 283  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  32160299 ttaggttttggtttggaattgattgttaaagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttc 32160398  T
Q  284 ctatcaaatttgggattt 301  Q
    |||||||||||| |||||    
T  32160399 ctatcaaatttgagattt 32160416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 74 - 301
Target Start/End: Original strand, 16549994 - 16550218
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaattttgatg 173  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||| | ||||||||| | |||||||||||||||| |||||||||||||     
T  16549994 atcatcaatactaaggtaaggttgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaattttgat- 16550092  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagag 273  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||    
T  16550093 --tagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacatag 16550190  T
Q  274 gttgagtttcctatcaaatttgggattt 301  Q
    ||||||||| ||||||||||||||||||    
T  16550191 gttgagttttctatcaaatttgggattt 16550218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 74 - 301
Target Start/End: Complemental strand, 16615668 - 16615444
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaattttgatg 173  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||| | ||||||||| | |||||||||||||||| |||||||||||||     
T  16615668 atcatcaatactaaggtaaggttgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaattttgat- 16615570  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagag 273  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||    
T  16615569 --tagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacatag 16615472  T
Q  274 gttgagtttcctatcaaatttgggattt 301  Q
    ||||||||| ||||||||||||||||||    
T  16615471 gttgagttttctatcaaatttgggattt 16615444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 1856553 - 1856615
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1856553 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggattt 1856615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 239 - 299
Target Start/End: Original strand, 13917725 - 13917785
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggat 299  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13917725 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggat 13917785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 202 - 298
Target Start/End: Complemental strand, 14274159 - 14274062
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||| |||| |||||||||||| |||||||||||| ||||||| ||||||| |||||||||| || ||||| ||||||||| |||||||||||    
T  14274159 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttggga 14274062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 25926452 - 25926514
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||    
T  25926452 taagaattgaagttcaggctgtagaataaacataggttcagtttcctataaaatttgggattt 25926514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 12754781 - 12754881
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 300  Q
    ||||||||| |||||||||||||||   ||||||||  ||| |||||  ||||||| |||||||||| || ||||| |||||||||||||||||||||||    
T  12754781 ttgattgttgaaagagtaggtaatctgatgaattaaagtaataattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatt 12754880  T
Q  301 t 301  Q
    |    
T  12754881 t 12754881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 84 - 191
Target Start/End: Complemental strand, 4071873 - 4071767
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaattttgatgattagagaaa 183  Q
    ||||||||||||||||||||||||||||||||||||||| || | ||||||||||  | |||||||| | ||||| | ||| |||||  |||| ||| ||    
T  4071873 ctaaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggttgtagttttggggatttgag-aa 4071775  T
Q  184 ttaggttt 191  Q
    ||||||||    
T  4071774 ttaggttt 4071767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 84 - 191
Target Start/End: Complemental strand, 15289158 - 15289052
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaattttgatgattagagaaa 183  Q
    |||||||||||||||||| ||||||||||||||||||||| | | ||||||||||  | |||||||| | ||||| | ||| |||||| |||| ||| ||    
T  15289158 ctaaggtaagggtgggaccaactttctctaattctaagtattataactctgaaaattggatttaacaagttgtaggttgtagttttgaggatttgag-aa 15289060  T
Q  184 ttaggttt 191  Q
    ||||||||    
T  15289059 ttaggttt 15289052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 4325995 - 4325933
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||||||    
T  4325995 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggattt 4325933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 301
Target Start/End: Original strand, 13315195 - 13315297
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| ||||||||||||| ||| ||||||||   || |||||  ||||||| |||||||||| || |||| |||||| |||||||||||||||    
T  13315195 aattgattgttgaaagagtaggtaacccaatgaattaaggaaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaatttggga 13315294  T
Q  299 ttt 301  Q
    |||    
T  13315295 ttt 13315297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 35771440 - 35771506
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaaca 150  Q
    ||||||||||||||||||||||||||||||||||||||| || | | ||||||||  ||||||||||    
T  35771440 ctaaggtaagggtgggactaactttctctaattctaagtgatataattctgaaaatcgaatttaaca 35771506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 48807324 - 48807410
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaattttg 170  Q
    |||||||||||||||||||||||||||||||||||||||  | | | ||||||||  |||||||||| | ||||||| ||| |||||    
T  48807324 ctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtagattgtagttttg 48807410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 12127162 - 12127200
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12127162 ctaaggtaagggtgggactaactttctctaattctaagt 12127200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 12754611 - 12754649
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12754611 ctaaggtaagggtgggactaactttctctaattctaagt 12754649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 14105580 - 14105638
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  14105580 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 14105638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 14415597 - 14415655
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  14415597 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 14415655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 16108011 - 16108069
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  16108011 taagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggg 16108069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 20586405 - 20586367
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20586405 ctaaggtaagggtgggactaactttctctaattctaagt 20586367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 23664275 - 23664333
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  23664275 taagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggg 23664333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 44190369 - 44190431
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||| ||||||||    
T  44190369 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatgtgggattt 44190431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 8851159 - 8851196
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8851159 taaggtaagggtgggactaactttctctaattctaagt 8851196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 11304087 - 11304030
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgg 296  Q
    ||||||| || ||||||  ||||||||||||| |||||||||||||||||||||||||    
T  11304087 taagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttgg 11304030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 12372326 - 12372289
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12372326 taaggtaagggtgggactaactttctctaattctaagt 12372289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 12465260 - 12465297
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12465260 taaggtaagggtgggactaactttctctaattctaagt 12465297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 13147472 - 13147509
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13147472 taaggtaagggtgggactaactttctctaattctaagt 13147509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 16078382 - 16078345
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16078382 taaggtaagggtgggactaactttctctaattctaagt 16078345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 171
Target Start/End: Original strand, 14218894 - 14218981
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaattttga 171  Q
    |||||||||||||| ||||||||||||||||||||||||  | | | ||||||||  |||||||||| | ||||| | ||| ||||||    
T  14218894 ctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttga 14218981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 285
Target Start/End: Original strand, 36300766 - 36300841
Alignment:
Q  211 aaagagtaggtaatccagtgaattaacataagaattgaagttcag-gctgtagaataaacagaggttgagtttcct 285  Q
    ||||||||||||||||| ||||||||| |||| | ||| ||||||   ||||||||||||| ||||||||||||||    
T  36300766 aaagagtaggtaatccattgaattaacgtaaggagtgaggttcagaattgtagaataaacataggttgagtttcct 36300841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 4690662 - 4690700
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  4690662 ctaaggtaaaggtgggactaactttctctaattctaagt 4690700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 13648181 - 13648119
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| ||| ||| |||||||||| || ||||| | ||||||||||||||||||||||    
T  13648181 taagaattgatgtttaggttgtagaataatcataggttaaatttcctatcaaatttgggattt 13648119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 14188446 - 14188504
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||| | |||||||||| || ||||| ||||||||||||||||||||    
T  14188446 taagaattgatgttcaagttgtagaataatcataggttaagtttcctatcaaatttggg 14188504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 16462968 - 16462910
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||||||| || || || ||||||||||||||||||||    
T  16462968 taagaattgatgttcaggttgtagaataatcatagattaagtttcctatcaaatttggg 16462910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 301
Target Start/End: Complemental strand, 19282984 - 19282882
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| ||||||||||||||||  |||| |||  ||| |||||   |||||| |||||||||| || |||| |||||| ||||||||||||| |    
T  19282984 aattgattgttgaaagagtaggtaatccgatgaactaaggtaataattggtcttcaggttgtagaataatcataggtagagttttctatcaaatttggaa 19282885  T
Q  299 ttt 301  Q
    |||    
T  19282884 ttt 19282882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 301
Target Start/End: Complemental strand, 38295540 - 38295438
Alignment:
Q  200 aattgattgtta-aagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    |||||||||||  |||||||||||||||  |||| |||  ||| |||||  ||||||| |||||||||| || |||| |||||||||||  |||||||||    
T  38295540 aattgattgttgcaagagtaggtaatccgatgaagtaaggtaataattggtgttcaggatgtagaataatcataggtagagtttcctattgaatttggga 38295441  T
Q  299 ttt 301  Q
    |||    
T  38295440 ttt 38295438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 42565948 - 42566042
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttg 295  Q
    ||||||||| |||| ||| |||||||| ||||||||||||  |||||| ||||||| ||||||||||  | ||||   |||||||||||||||||    
T  42565948 ttgattgttgaaagtgtacgtaatccaatgaattaacatagaaattgatgttcaggttgtagaataacaataggtaatgtttcctatcaaatttg 42566042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 47974819 - 47974857
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  47974819 ctaaggtaagggtgagactaactttctctaattctaagt 47974857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 11067520 - 11067483
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  11067520 taaggtaagggtgagactaactttctctaattctaagt 11067483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 12322930 - 12322967
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| |||||||||||||||||||||||    
T  12322930 taaggtaagggtggaactaactttctctaattctaagt 12322967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 17505117 - 17505174
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgg 296  Q
    |||||||||| |||||||  ||||||||| || ||||| |||||||||||||||||||    
T  17505117 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 17505174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 17548097 - 17548040
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgg 296  Q
    |||||||||| |||||||  ||||||||| || ||||| |||||||||||||||||||    
T  17548097 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 17548040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 105
Target Start/End: Original strand, 19485956 - 19485993
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaac 105  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  19485956 ccgccgatcatcaatactaaggtaagggtgggactaac 19485993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 20620338 - 20620301
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  20620338 taaggtaagtgtgggactaactttctctaattctaagt 20620301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 32433589 - 32433626
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  32433589 taaggtaagggtgagactaactttctctaattctaagt 32433626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 33002205 - 33002168
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||| |||||||||||||||||||||||||    
T  33002205 taaggtaagggtcggactaactttctctaattctaagt 33002168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 301
Target Start/End: Complemental strand, 18570584 - 18570481
Alignment:
Q  199 gaattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggct-gtagaataaacagaggttgagtttcctatcaaatttgg 296  Q
    |||||||||||| ||||||||||||| ||| ||||||||| |||| | ||| ||||||  | |||||||||||| ||||||| |||||| |  |||||||    
T  18570584 gaattgattgttgaaagagtaggtaa-ccattgaattaacgtaaggaatgaggttcagaattgtagaataaacataggttgaatttcctcttgaatttgg 18570486  T
Q  297 gattt 301  Q
    |||||    
T  18570485 gattt 18570481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 47975007 - 47975107
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 300  Q
    ||||||||| ||||| ||||||||||  ||||||||  ||| |||||  ||||||| |||||||||| || || || ||||| ||||||||||||| |||    
T  47975007 ttgattgttgaaagattaggtaatccgatgaattaaggtaataattggtgttcaggttgtagaataatcatagattaagttttctatcaaatttggaatt 47975106  T
Q  301 t 301  Q
    |    
T  47975107 t 47975107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 115
Target Start/End: Original strand, 8488093 - 8488124
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaat 115  Q
    ||||||||||||||||||||||||||||||||    
T  8488093 ctaaggtaagggtgggactaactttctctaat 8488124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 115
Target Start/End: Original strand, 8513752 - 8513783
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaat 115  Q
    ||||||||||||||||||||||||||||||||    
T  8513752 ctaaggtaagggtgggactaactttctctaat 8513783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 115
Target Start/End: Original strand, 16250221 - 16250252
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaat 115  Q
    ||||||||||||||||||||||||||||||||    
T  16250221 ctaaggtaagggtgggactaactttctctaat 16250252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 301
Target Start/End: Complemental strand, 19195071 - 19195028
Alignment:
Q  258 tgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| || ||||| ||||||||||||||||||||||||    
T  19195071 tgtagaataatcataggttaagtttcctatcaaatttgggattt 19195028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 297
Target Start/End: Complemental strand, 29797431 - 29797392
Alignment:
Q  258 tgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||||||||| | ||||||||||||||||||||||||    
T  29797431 tgtagaataaacatatgttgagtttcctatcaaatttggg 29797392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 297
Target Start/End: Complemental strand, 29801250 - 29801211
Alignment:
Q  258 tgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||||||||| | ||||||||||||||||||||||||    
T  29801250 tgtagaataaacatatgttgagtttcctatcaaatttggg 29801211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 30820134 - 30820189
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagta 123  Q
    ||||| ||||||||||||||||| |||||||||||||| |||  ||||||| ||||    
T  30820134 ccgccgatcatcaatactaaggtgagggtgggactaaccttcagtaattctgagta 30820189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 119
Target Start/End: Complemental strand, 10277375 - 10277345
Alignment:
Q  89 gtaagggtgggactaactttctctaattcta 119  Q
    |||||||||||||||||||||||||||||||    
T  10277375 gtaagggtgggactaactttctctaattcta 10277345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 10658850 - 10658888
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  10658850 ctaaggtaagggtgggactaaccttctttaattctaagt 10658888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 11662005 - 11661947
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||| |||  | ||||| ||||||||||||||||||||    
T  11662005 taagaattgatgttcaggttgtagactaattataggttaagtttcctatcaaatttggg 11661947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 13256592 - 13256530
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| ||||| | ||||| |||| || ||| | ||||||||||||||||||||||||    
T  13256592 taagaattgatgttcaagttgtaggataatcataggataagtttcctatcaaatttgggattt 13256530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 14180397 - 14180435
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  14180397 ctaaggtaagggtgtgactaattttctctaattctaagt 14180435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 14928290 - 14928364
Alignment:
Q  86 aaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagat 160  Q
    |||||||||||||||||||| |||  |||||||||||  ||| | ||||||||  | |||||||||| |||||||    
T  14928290 aaggtaagggtgggactaaccttcagtaattctaagttctttaattctgaaaattgtatttaacatgttgtagat 14928364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 15095636 - 15095674
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||| ||| ||||||||||||    
T  15095636 ctaaggtaagggtgggactaaccttcactaattctaagt 15095674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 15351756 - 15351830
Alignment:
Q  86 aaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagat 160  Q
    |||||||||||||||||||| |||  |||||||||||  ||| | ||||||||  | |||||||||| |||||||    
T  15351756 aaggtaagggtgggactaaccttcagtaattctaagttctttaattctgaaaattgtatttaacatgttgtagat 15351830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 119
Target Start/End: Complemental strand, 16999488 - 16999454
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattcta 119  Q
    ||||||||||||| |||||||||||||||||||||    
T  16999488 taaggtaagggtgagactaactttctctaattcta 16999454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 18955383 - 18955345
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  18955383 ctaaggtaaaggtgagactaactttctctaattctaagt 18955345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 118
Target Start/End: Complemental strand, 20214200 - 20214166
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattct 118  Q
    |||||||||||||||||||||||||||| ||||||    
T  20214200 ctaaggtaagggtgggactaactttctcaaattct 20214166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 24269946 - 24269984
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||| ||||||||||||||| |||||    
T  24269946 ctaaggtaagggtgggattaactttctctaattttaagt 24269984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 25942366 - 25942312
Alignment:
Q  243 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||| ||||||| |||||||||| |  ||||| ||||||||||||||||||||    
T  25942366 aattgatgttcaggttgtagaataatcttaggttaagtttcctatcaaatttggg 25942312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 39431340 - 39431402
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| ||||||| |||||||||| || | |||  |||||||||||||| ||||||||    
T  39431340 taagaattgatgttcaggttgtagaataatcatatgttatgtttcctatcaaatatgggattt 39431402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 115
Target Start/End: Original strand, 43276744 - 43276774
Alignment:
Q  85 taaggtaagggtgggactaactttctctaat 115  Q
    |||||||||||||||||||||||||||||||    
T  43276744 taaggtaagggtgggactaactttctctaat 43276774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 44374896 - 44374858
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| || |||||||||||||||||||||    
T  44374896 ctaaggtaagggtgagagtaactttctctaattctaagt 44374858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 44383761 - 44383723
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| || |||||||||||||||||||||    
T  44383761 ctaaggtaagggtgagagtaactttctctaattctaagt 44383723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 46386087 - 46386125
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||| ||||||| |||||||||||||||||||||||||    
T  46386087 ctaagataagggtaggactaactttctctaattctaagt 46386125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 18074647 - 18074684
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  18074647 taaggtaagagtgggattaactttctctaattctaagt 18074684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 8930881 - 8930965
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttc 283  Q
    ||||||||||| ||||||||||||| ||| |||||||||  ||| | |||  |||||  |||| |||||||| ||||||||||||    
T  8930881 aattgattgttgaaagagtaggtaaaccattgaattaacgaaaggaatgagcttcagattgtataataaacataggttgagtttc 8930965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 100
Target Start/End: Original strand, 46579742 - 46579774
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtggga 100  Q
    ||||| |||||||||||||||||||||||||||    
T  46579742 ccgccgatcatcaatactaaggtaagggtggga 46579774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 184; Significance: 1e-99; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 74 - 301
Target Start/End: Complemental strand, 16979975 - 16979748
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaattttgatg 173  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | ||||||||| | |||||||||||||||| ||||||||||||||    
T  16979975 atcatcaatactaaggtaagggtgggactaactttctttaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaattttgatg 16979876  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagag 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||    
T  16979875 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacatag 16979776  T
Q  274 gttgagtttcctatcaaatttgggattt 301  Q
    ||||||||||||||||||||||| ||||    
T  16979775 gttgagtttcctatcaaatttggaattt 16979748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 85 - 301
Target Start/End: Complemental strand, 22652825 - 22652609
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaattttgatgattagagaaat 184  Q
    ||||||||| ||||||||||||||||||||||||||||||||| | |||||||||   |||||||||||||||| | | |||||||||||||||||||||    
T  22652825 taaggtaagagtgggactaactttctctaattctaagtaatttaattctgaaaactagatttaacatgatgtaggtcgcaattttgatgattagagaaat 22652726  T
Q  185 taggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcc 284  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22652725 taggttttggtttggaattgattgttaaagagtaggtaatctagtgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcc 22652626  T
Q  285 tatcaaatttgggattt 301  Q
    |||||||||||||||||    
T  22652625 tatcaaatttgggattt 22652609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 200 - 300
Target Start/End: Original strand, 45803451 - 45803552
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| ||||||||||||||||  |||||||||||||||||||| || |||| ||||||||||||| ||||||||||||||||  |||||||||    
T  45803451 aattgattgttgaaagagtaggtaatccgatgaattaacataagaattgatgtccaggttgtagaataaacataggttgagtttcctattgaatttggga 45803550  T
Q  299 tt 300  Q
    ||    
T  45803551 tt 45803552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 5224222 - 5224160
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5224222 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggattt 5224160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 200 - 298
Target Start/End: Original strand, 13522463 - 13522561
Alignment:
Q  200 aattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||  | ||||   ||||||||||||||||||||    
T  13522463 aattgatcgttaaagagtaggtaatccaatgaattaacataagaattgatgttcaggttgtagaataacaataggtgatgtttcctatcaaatttggga 13522561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 26054587 - 26054649
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26054587 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggattt 26054649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 165 - 301
Target Start/End: Original strand, 48043557 - 48043694
Alignment:
Q  165 attttgatgattagagaaattaggttttggtttggaattgattgttaaaga-gtaggtaatccagtgaattaacataagaattgaagttcaggctgtaga 263  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||| | |||| |||| || |||||||   ||  | |||| ||||| | ||||||    
T  48043557 attttgatgattagagaaattagattttgatttggaattgattgttaaaaaggtagataattcaatgaattagtgtacaatttgatgttcaagttgtaga 48043656  T
Q  264 ataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    ||||||| ||||||||||||||||  ||||||||||||    
T  48043657 ataaacataggttgagtttcctattgaatttgggattt 48043694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 15465994 - 15465932
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  15465994 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatatgggattt 15465932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 301
Target Start/End: Complemental strand, 25202107 - 25201972
Alignment:
Q  165 attttgatgattagagaaattaggttttggtttggaattgattgttaaaga-gtaggtaatccagtgaattaacataagaattgaagttcaggctgtaga 263  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| |||| || |||||||   ||  | |||| |||||   | ||||    
T  25202107 attttgatgattagagaaattaggttttgatttggaattgattgttaaaaaggtagataattcaatgaattagtgtacaatttgatgttca--ttctaga 25202010  T
Q  264 ataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    ||||||| ||||||||||||||||  ||||||||||||    
T  25202009 ataaacataggttgagtttcctattgaatttgggattt 25201972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 125
Target Start/End: Complemental strand, 36528936 - 36528879
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaat 125  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36528936 ccgccgatcatcaatactaaggtaagggtgggattaactttctctaattctaagtaat 36528879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 299
Target Start/End: Complemental strand, 48631270 - 48631170
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| |||| ||||||||| || |||||||||||||||||||| ||||||| ||||||||||  | ||||   ||||||||||||||||||||    
T  48631270 aattgattgttgaaagtgtaggtaattcaatgaattaacataagaattgatgttcaggttgtagaataacaataggtaatgtttcctatcaaatttggga 48631171  T
Q  299 t 299  Q
    |    
T  48631170 t 48631170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 15446852 - 15446905
Alignment:
Q  69 cgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15446852 cgccgatcatcattactaaggtaagggtgggactaactttctctaattctaagt 15446905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 301
Target Start/End: Original strand, 3527270 - 3527372
Alignment:
Q  201 attgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggct-gtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    |||||||||| ||||||||||||| ||| ||||||||| |||| | ||| ||||||  | |||||||||||| ||||||||||||||||  |||||||||    
T  3527270 attgattgttgaaagagtaggtaagccattgaattaacgtaaggaatgaggttcagaattgtagaataaacataggttgagtttcctattgaatttggga 3527369  T
Q  299 ttt 301  Q
    |||    
T  3527370 ttt 3527372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 13437138 - 13437080
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  13437138 taagaatcgatgttcaggttgtagaataaacataggttgagtttcctatcaaatttggg 13437080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 43549808 - 43549870
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||||||    
T  43549808 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggattt 43549870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 68 - 125
Target Start/End: Original strand, 3263946 - 3264003
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaat 125  Q
    ||||| ||||||||||||||||||||||| ||| |||| |||||||||||||||||||    
T  3263946 ccgccgatcatcaatactaaggtaagggtcggattaaccttctctaattctaagtaat 3264003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 42427 - 42369
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  42427 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 42369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 3803713 - 3803655
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  3803713 taagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggg 3803655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 5200242 - 5200280
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5200242 ctaaggtaagggtgggactaactttctctaattctaagt 5200280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 12305962 - 12305904
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  12305962 taagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggg 12305904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 16050980 - 16050942
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16050980 ctaaggtaagggtgggactaactttctctaattctaagt 16050942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 19568207 - 19568245
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19568207 ctaaggtaagggtgggactaactttctctaattctaagt 19568245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 122
Target Start/End: Original strand, 24177719 - 24177773
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||| || ||||||||||||||||||||||||| |||||||||||||| |||||    
T  24177719 ccgccgattatcaatactaaggtaagggtgggacaaactttctctaattataagt 24177773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 29544186 - 29544244
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  29544186 taagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggg 29544244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 40808049 - 40808011
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40808049 ctaaggtaagggtgggactaactttctctaattctaagt 40808011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 40812886 - 40812848
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40812886 ctaaggtaagggtgggactaactttctctaattctaagt 40812848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 44274471 - 44274433
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  44274471 ctaaggtaagggtgggactaactttctctaattctaagt 44274433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 46722739 - 46722797
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  46722739 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 46722797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 55291754 - 55291812
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  55291754 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 55291812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 17045018 - 17044981
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17045018 taaggtaagggtgggactaactttctctaattctaagt 17044981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 17047178 - 17047141
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17047178 taaggtaagggtgggactaactttctctaattctaagt 17047141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 17541486 - 17541449
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17541486 taaggtaagggtgggactaactttctctaattctaagt 17541449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 22306583 - 22306620
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22306583 taaggtaagggtgggactaactttctctaattctaagt 22306620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 6820069 - 6820010
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||| |||||||||||    
T  6820069 taagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttggga 6820010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 10555206 - 10555148
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| |||||||  ||||||||| || ||||| ||||||||||||||||||||    
T  10555206 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 10555148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 11563778 - 11563740
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  11563778 ctaaggtaagggtgggactaaccttctctaattctaagt 11563740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 122
Target Start/End: Original strand, 11885560 - 11885594
Alignment:
Q  88 ggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||    
T  11885560 ggtaagggtgggactaactttctctaattctaagt 11885594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 13185948 - 13185910
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  13185948 ctaaggtaagggtgggactaactttctctaattttaagt 13185910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 15566797 - 15566759
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  15566797 ctaaagtaagggtgggactaactttctctaattctaagt 15566759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 17518872 - 17518910
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  17518872 ctaaggcaagggtgggactaactttctctaattctaagt 17518910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 17533734 - 17533772
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  17533734 ctaaggcaagggtgggactaactttctctaattctaagt 17533772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 18890323 - 18890265
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| ||| |||||| || ||||| ||||||||||||||||||||    
T  18890323 taagaattgatgttcaggttgtggaataatcataggttaagtttcctatcaaatttggg 18890265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 33565140 - 33565102
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  33565140 ctaaggtaagggtgtgactaactttctctaattctaagt 33565102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 49900783 - 49900745
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  49900783 ctaaggtaagggtgggactaattttctctaattctaagt 49900745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 54521662 - 54521604
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||  ||||||||||| | ||||||||||||||||||||||||||    
T  54521662 taagaatcgatgttcagattgtagaataaatataggttgagtttcctatcaaatttggg 54521604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 11259483 - 11259446
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  11259483 taaggtaagggtgagactaactttctctaattctaagt 11259446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 105
Target Start/End: Original strand, 37641487 - 37641524
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaac 105  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  37641487 ccgccgatcatcaatactaaggtaagggtgggactaac 37641524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 297
Target Start/End: Original strand, 6805043 - 6805139
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||||| |||||||||||||||   ||||||||  ||| |||||  ||||||| |||||||||| || | ||| ||||| ||||||||||||||    
T  6805043 ttgattgttgaaagagtaggtaatctgatgaattaaggtaataattggtgttcaggttgtagaataatcatatgttaagttttctatcaaatttggg 6805139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 21845732 - 21845778
Alignment:
Q  166 ttttgatgattagagaaattaggttttggtttggaattgattgttaaa 213  Q
    |||||||| ||| ||||||||||||||| |||||||||||||||||||    
T  21845732 ttttgatg-ttatagaaattaggttttgatttggaattgattgttaaa 21845778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 119
Target Start/End: Original strand, 35960927 - 35960962
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattcta 119  Q
    ||||||||||||||||| ||||||||||||||||||    
T  35960927 ctaaggtaagggtgggattaactttctctaattcta 35960962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 267
Target Start/End: Original strand, 3160742 - 3160808
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||| |||||||||||||| || |||||||| |||| |||||| ||| ||| ||||||||||    
T  3160742 ttgattgttgaaagagtaggtaattcaatgaattaatataaaaattgatgtttaggttgtagaataa 3160808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 9510915 - 9510953
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  9510915 ctaaggtaagggtgaaactaactttctctaattctaagt 9510953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 9518890 - 9518928
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  9518890 ctaaggtaagggtgaaactaactttctctaattctaagt 9518928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 119
Target Start/End: Complemental strand, 10311575 - 10311545
Alignment:
Q  89 gtaagggtgggactaactttctctaattcta 119  Q
    |||||||||||||||||||||||||||||||    
T  10311575 gtaagggtgggactaactttctctaattcta 10311545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 10563761 - 10563723
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||| ||||||||||||||||||||||| |||||    
T  10563761 ctaaggtaatggtgggactaactttctctaattttaagt 10563723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 122
Target Start/End: Complemental strand, 14508896 - 14508862
Alignment:
Q  88 ggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||| ||||||||||||||||||||||||    
T  14508896 ggtaagggtgagactaactttctctaattctaagt 14508862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Complemental strand, 14967253 - 14967203
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattct 118  Q
    ||||| |||||||||||||||||||||| ||||||||| |||  |||||||    
T  14967253 ccgccgatcatcaatactaaggtaagggggggactaaccttcaataattct 14967203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 16324693 - 16324751
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| ||||||||||  | || || ||||||||||||||||||||    
T  16324693 taagaattgatgttcaggttgtagaataattatagcttaagtttcctatcaaatttggg 16324751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 43929290 - 43929228
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    ||||| |||| ||| ||| |||||||||| |  ||||| ||||||||||||||||||||||||    
T  43929290 taagacttgatgtttaggttgtagaataatcgtaggttaagtttcctatcaaatttgggattt 43929228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 15931508 - 15931545
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  15931508 taaggtaaaggtgagactaactttctctaattctaagt 15931545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 17539158 - 17539121
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||| |||||||||| |||||||||||||    
T  17539158 taaggtaagggtgagactaactttatctaattctaagt 17539121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 122
Target Start/End: Complemental strand, 17694115 - 17694082
Alignment:
Q  89 gtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||| ||||||||||||||||||||||||    
T  17694115 gtaagggtgagactaactttctctaattctaagt 17694082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 41172371 - 41172408
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||| || |||||    
T  41172371 taaggtaagggtgggactaactttctctacttataagt 41172408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 105
Target Start/End: Original strand, 52465354 - 52465391
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaac 105  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  52465354 ccgccgatcatcaatactaaggtaagggtgtgactaac 52465391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 123
Target Start/End: Original strand, 52988847 - 52988896
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagta 123  Q
    |||||||||||||||||||||||| ||||||| |||  ||||||| ||||    
T  52988847 atcatcaatactaaggtaagggtgagactaaccttcaataattctgagta 52988896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 267
Target Start/End: Original strand, 12155141 - 12155209
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||||| |||| |||||||| ||| ||||||||||| | |||||| ||| ||| ||||||||||    
T  12155141 aattgattgttgaaagtgtaggtaacccaatgaattaacatgaaaattgatgttgaggttgtagaataa 12155209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 182; Significance: 2e-98; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 68 - 301
Target Start/End: Original strand, 21080952 - 21081185
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaatt 167  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | |||||||||||||||  ||||||||    
T  21080952 ccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactggatttaacatgatgtaagtggtaatt 21081051  T
Q  168 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||    
T  21081052 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaaaacaatgaattaacataagaattgaagttcaggctgtagaataa 21081151  T
Q  268 acagaggttgagtttcctatcaaatttgggattt 301  Q
    ||| | ||||||||||||||||||||| ||||||    
T  21081152 acataagttgagtttcctatcaaatttaggattt 21081185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 68 - 301
Target Start/End: Complemental strand, 25184258 - 25184025
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaatt 167  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| | |||||||||   |||||||||| ||||| ||||||||    
T  25184258 ccgccaatcatcaatactaaggtaagggtgagactaactttctctaattctaagtattttaattctgaaaactagatttaacatgttgtaggtggtaatt 25184159  T
Q  168 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||    
T  25184158 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcagactgtagaataa 25184059  T
Q  268 acagaggttgagtttcctatcaaatttgggattt 301  Q
    ||| ||||||||||||||||||||||||||||||    
T  25184058 acataggttgagtttcctatcaaatttgggattt 25184025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 68 - 301
Target Start/End: Complemental strand, 21915693 - 21915460
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaatt 167  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||| ||| | ||||||||| | |||||||||||||||| ||||||||    
T  21915693 ccgccgatcatcaatactaaagtaagggtgtgactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaatt 21915594  T
Q  168 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||    
T  21915593 ttgatgaatagagaaattaggttttggtttggaattgattgttaaagaataggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 21915494  T
Q  268 acagaggttgagtttcctatcaaatttgggattt 301  Q
    ||| |||||||||||||||| |||||||||||||    
T  21915493 acataggttgagtttcctataaaatttgggattt 21915460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 93 - 301
Target Start/End: Original strand, 18357975 - 18358183
Alignment:
Q  93 gggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaattttgatgattagagaaattaggtttt 192  Q
    ||||||||||||||||||||||||||||||| ||| | ||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18357975 gggtgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaattttgatgattagagaaattaggtttt 18358074  T
Q  193 ggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaat 292  Q
    |||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18358075 ggtttggaattgattgttaaagagtatgtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaat 18358174  T
Q  293 ttgggattt 301  Q
    |||||||||    
T  18358175 ttgggattt 18358183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 200 - 300
Target Start/End: Original strand, 12626546 - 12626647
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| ||||||||||||||||  |||||||||| ||||||||| ||||||| ||||||||||||| | ||||||||||||||  |||||||||    
T  12626546 aattgattgttgaaagagtaggtaatccgatgaattaacagaagaattgatgttcaggttgtagaataaacataagttgagtttcctattgaatttggga 12626645  T
Q  299 tt 300  Q
    ||    
T  12626646 tt 12626647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 122
Target Start/End: Complemental strand, 357950 - 357896
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  357950 ccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagt 357896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 200 - 301
Target Start/End: Complemental strand, 19647172 - 19647070
Alignment:
Q  200 aattgattgttaaaga-gtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| || | |||||||||||| |||||||||||||||||||| ||||||| ||||||||||  | ||||   ||||||||||||||||||||    
T  19647172 aattgattgttgaaaatgtaggtaatccaatgaattaacataagaattgatgttcaggttgtagaataacaataggtaatgtttcctatcaaatttggga 19647073  T
Q  299 ttt 301  Q
    |||    
T  19647072 ttt 19647070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 31346019 - 31345957
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||    
T  31346019 taagaattgaagttcaggctatagaataaacataggttgagtttcctatcaaatttggtattt 31345957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 40912383 - 40912335
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40912383 atcatcaatactaaggtaagggtgggactaactttctctaattctaagt 40912335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 297
Target Start/End: Original strand, 36734530 - 36734664
Alignment:
Q  165 attttgatgattagagaaattaggttttggtttggaattgattgttaaa--gagtaggtaatccagtgaattaacataagaattgaagttcaggctgtag 262  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||   | ||| |||| || |||||||   ||  |||||  ||||||| |||||    
T  36734530 attttgatgattagagaaattagattttgatttggaattgattgttaaaataaatagataattcaatgaattagtgtacaaattggtgttcaggttgtag 36734629  T
Q  263 aataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||| |  ||||| ||||||||||||||||||||    
T  36734630 aataatcttaggttaagtttcctatcaaatttggg 36734664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 297
Target Start/End: Original strand, 1383768 - 1383864
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||||| ||||||||||||||||  ||||||||| ||| |||||   |||||| |||||||||| || ||||| ||||||||||||||||||||    
T  1383768 ttgattgttgaaagagtaggtaatccgatgaattaacgtaataattggtcttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 1383864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 22502024 - 22501956
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatg 152  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| ||  | ||||||||||    
T  22502024 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatg 22501956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 22509958 - 22509890
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatg 152  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| ||  | ||||||||||    
T  22509958 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatg 22509890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 45535862 - 45535762
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 300  Q
    ||||||||| |||| |||||||||||| ||||||||||||| |||||| ||||||| ||||||||||  | ||||   ||||||| ||||||||||||||    
T  45535862 ttgattgttgaaagtgtaggtaatccaatgaattaacataaaaattgatgttcaggttgtagaataacaataggtaatgtttcctgtcaaatttgggatt 45535763  T
Q  301 t 301  Q
    |    
T  45535762 t 45535762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 301
Target Start/End: Original strand, 149620 - 149722
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| ||||||||||||||||  ||||||||  ||| |||||  ||||||  ||| |||||| || ||||| |||||||||||||||||||||    
T  149620 aattgattgttgaaagagtaggtaatccgatgaattaaggtaataattggtgttcagattgttgaataatcataggttaagtttcctatcaaatttggga 149719  T
Q  299 ttt 301  Q
    |||    
T  149720 ttt 149722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 158
Target Start/End: Complemental strand, 14694379 - 14694305
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtag 158  Q
    |||||||||||||| |||||||||||| |||||||||||||||| | | ||||||  | ||||||||||||||||    
T  14694379 ctaaggtaagggtgagactaactttctataattctaagtaatttaattttgaaaattggatttaacatgatgtag 14694305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 23338552 - 23338610
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  23338552 taagaatcgatgttcaggttgtagaataaacataggttgagtttcctatcaaatttggg 23338610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 17307539 - 17307501
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17307539 ctaaggtaagggtgggactaactttctctaattctaagt 17307501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 24516239 - 24516201
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24516239 ctaaggtaagggtgggactaactttctctaattctaagt 24516201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 25142257 - 25142219
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25142257 ctaaggtaagggtgggactaactttctctaattctaagt 25142219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 27852721 - 27852683
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27852721 ctaaggtaagggtgggactaactttctctaattctaagt 27852683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 41301082 - 41301144
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| ||||||| |||||||||| || ||||| |||||||||||||| |||||||||    
T  41301082 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaaattgggattt 41301144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 2523747 - 2523784
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2523747 taaggtaagggtgggactaactttctctaattctaagt 2523784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 5031129 - 5031166
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  5031129 taaggtaagggtgggactaactttctctaattctaagt 5031166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 24780840 - 24780877
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24780840 taaggtaagggtgggactaactttctctaattctaagt 24780877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 211 - 267
Target Start/End: Complemental strand, 45535722 - 45535666
Alignment:
Q  211 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    |||| |||||||||||| ||||||||||||| |||||| ||||||| ||||||||||    
T  45535722 aaagtgtaggtaatccaatgaattaacataaaaattgatgttcaggttgtagaataa 45535666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 3539890 - 3539852
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  3539890 ctaaggtaagggtgggactaactttctctaattttaagt 3539852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 10684085 - 10684143
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||  ||||||||||||| | ||||||||||||||||||||||||    
T  10684085 taagaatcgatgttcagattgtagaataaacatatgttgagtttcctatcaaatttggg 10684143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 13100887 - 13100945
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || |||||| ||||||||||| || ||||| ||||||||||||||||||||    
T  13100887 taagaatcgatgttcagactgtagaataatcataggttaagtttcctatcaaatttggg 13100945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 20262059 - 20262001
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||  ||||||||||||| | ||||||||||||||||||||||||    
T  20262059 taagaatcgatgttcagattgtagaataaacatatgttgagtttcctatcaaatttggg 20262001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 21072841 - 21072899
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| ||| |||||| || ||||| ||||||||||||||||||||    
T  21072841 taagaattgatgttcaggttgtggaataatcataggttaagtttcctatcaaatttggg 21072899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 24884297 - 24884231
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||| |||| |||||||||||| |||||||||||| ||||||| ||||||| | ||||||||    
T  24884297 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaggttatagaataa 24884231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 297
Target Start/End: Original strand, 28652677 - 28652763
Alignment:
Q  211 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||||||||||||| ||||||||  ||| |||||| |||||||  ||||||||| || |||  |||||| |||| |||||||||    
T  28652677 aaagagtaggtaatccaatgaattaaggtaataattgatgttcaggtagtagaataatcataggaagagttttctataaaatttggg 28652763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 43707200 - 43707258
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||| | |||||||||| || ||||| ||||||||||||||||||||    
T  43707200 taagaattgatgttcaagttgtagaataatcataggttaagtttcctatcaaatttggg 43707258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 9975981 - 9975944
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||| |||||||||||||||||||||||||    
T  9975981 taaggtaagggttggactaactttctctaattctaagt 9975944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 105
Target Start/End: Original strand, 34858175 - 34858212
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaac 105  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  34858175 ccgccgatcatcaatactaaggtaagggtgggactaac 34858212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 105
Target Start/End: Original strand, 34873237 - 34873274
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaac 105  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  34873237 ccgccgatcatcaatactaaggtaagggtgggactaac 34873274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 27484478 - 27484514
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttct 110  Q
    |||||||||||||||||||||||| ||||||||||||    
T  27484478 atcatcaatactaaggtaagggtgagactaactttct 27484514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 1383545 - 1383580
Alignment:
Q  87 aggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||| ||||||||||||||||||||||||    
T  1383545 aggtaagggtgagactaactttctctaattctaagt 1383580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 301
Target Start/End: Original strand, 28345209 - 28345252
Alignment:
Q  258 tgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| || ||||| ||||||||||||||||||||||||    
T  28345209 tgtagaataatcataggttaagtttcctatcaaatttgggattt 28345252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 103
Target Start/End: Original strand, 34491223 - 34491258
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggacta 103  Q
    ||||| ||||||||||||||||||||||||||||||    
T  34491223 ccgccgatcatcaatactaaggtaagggtgggacta 34491258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 19201199 - 19201237
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||| |||||||| ||||||||||||||||||||||||    
T  19201199 ctaagttaagggtgagactaactttctctaattctaagt 19201237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 20590435 - 20590493
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| |||||||  ||||||||| || ||||| ||||| ||||||||||||||    
T  20590435 taagaattgatgttcaggtggtagaataatcataggttaagttttctatcaaatttggg 20590493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 25046171 - 25046133
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  25046171 ctaaggtaagggtgggactaaccttctttaattctaagt 25046133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 119
Target Start/End: Complemental strand, 37270747 - 37270717
Alignment:
Q  89 gtaagggtgggactaactttctctaattcta 119  Q
    |||||||||||||||||||||||||||||||    
T  37270747 gtaagggtgggactaactttctctaattcta 37270717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 44072610 - 44072572
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  44072610 ctaaggtaagggtgagactaactttcactaattctaagt 44072572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 24436700 - 24436663
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  24436700 taagataagggtgggactaactttctcgaattctaagt 24436663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 267
Target Start/End: Complemental strand, 22501786 - 22501730
Alignment:
Q  211 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    |||| |||||||||||| |||||||||||| ||||||| ||||| | ||| ||||||    
T  22501786 aaagtgtaggtaatccaatgaattaacatatgaattgatgttcaagttgtggaataa 22501730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 267
Target Start/End: Complemental strand, 22509720 - 22509664
Alignment:
Q  211 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    |||| |||||||||||| |||||||||||| ||||||| ||||| | ||| ||||||    
T  22509720 aaagtgtaggtaatccaatgaattaacatatgaattgatgttcaagttgtggaataa 22509664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 180; Significance: 3e-97; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 74 - 301
Target Start/End: Complemental strand, 16198899 - 16198672
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaattttgatg 173  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||| ||||| ||||||||| | |||||||||||||||| ||||||||||||||    
T  16198899 atcatcaatactaaggtaaaagtgggactaactttctctaattctaagtattttcattctgaaaactggatttaacatgatgtaggtggtaattttgatg 16198800  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagag 273  Q
    || || ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||    
T  16198799 ataagggaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacatag 16198700  T
Q  274 gttgagtttcctatcaaatttgggattt 301  Q
    ||||||||||||||||||||||||||||    
T  16198699 gttgagtttcctatcaaatttgggattt 16198672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 68 - 301
Target Start/End: Complemental strand, 23479151 - 23478918
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaatt 167  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||  | | ||||||| | |||||||||||||||| ||||||||    
T  23479151 ccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtatttaaattatgaaaactggatttaacatgatgtaggtggtaatt 23479052  T
Q  168 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  23479051 ttgatgattagagaaattaggttttggtttggaagtgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 23478952  T
Q  268 acagaggttgagtttcctatcaaatttgggattt 301  Q
    ||| ||||||||||||||||||||||| ||||||    
T  23478951 acataggttgagtttcctatcaaatttaggattt 23478918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 68 - 297
Target Start/End: Complemental strand, 19880891 - 19880663
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaatt 167  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||| | |||||||||  ||||||||||||||||| ||||||||    
T  19880891 ccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaag-attttaattctgaaaactaaatttaacatgatgtaggtggtaatt 19880793  T
Q  168 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||    
T  19880792 ttgatgattagagaaattaggttttgttttggaattgattgttaaagagtaggtaattaaatgaattaacataagaattgaagttcaggctgtagaataa 19880693  T
Q  268 acagaggttgagtttcctatcaaatttggg 297  Q
    ||| ||||||||||||||||||||||||||    
T  19880692 acataggttgagtttcctatcaaatttggg 19880663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 69 - 297
Target Start/End: Complemental strand, 26454776 - 26454546
Alignment:
Q  69 cgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaattt 168  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||| | |||||||||||||||| |||||||||    
T  26454776 cgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaattt 26454677  T
Q  169 tgatgattagagaaat--taggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaata 266  Q
    |||| |||||||||||  |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||    
T  26454676 tgattattagagaaatattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattaaagttcaggctgtagaata 26454577  T
Q  267 aacagaggttgagtttcctatcaaatttggg 297  Q
    |||| ||||||||||||||||||||||||||    
T  26454576 aacataggttgagtttcctatcaaatttggg 26454546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 84 - 301
Target Start/End: Original strand, 25657513 - 25657730
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaattttgatgattagagaaa 183  Q
    |||| |||||||||||| |||||||||||||||||||||| ||| | ||||||||  | |||||||||||||||| ||||||||||||||||||||||||    
T  25657513 ctaaagtaagggtgggagtaactttctctaattctaagtattttaattctgaaaattggatttaacatgatgtaggtggtaattttgatgattagagaaa 25657612  T
Q  184 ttaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttc 283  Q
    ||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  25657613 ttaggttttggtttgaaattgattgttaaagagtaggtaattcaatgaattaacataagaattgatgttcaggctgtagaataaacataggttgagtttc 25657712  T
Q  284 ctatcaaatttgggattt 301  Q
    ||||||||||||||||||    
T  25657713 ctatcaaatttgggattt 25657730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 74 - 224
Target Start/End: Original strand, 17158952 - 17159102
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaattttgatg 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| | | |||||||   |||||||||||||||| ||||||||||||||    
T  17158952 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattttgaaaactagatttaacatgatgtaggtggtaattttgatg 17159051  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaat 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17159052 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaat 17159102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 211 - 297
Target Start/End: Complemental strand, 22483706 - 22483620
Alignment:
Q  211 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||||||||   |||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||  ||||||||    
T  22483706 aaagagtaggtaatctgatgaattaacataagaattgatgttcaggttgtagaataaacataggttgagtttcctattgaatttggg 22483620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 14397063 - 14397120
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgg 296  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14397063 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgg 14397120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 299
Target Start/End: Complemental strand, 20879411 - 20879311
Alignment:
Q  200 aattgattgttaaa-gagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    |||||||||||||| | |||||||||||| |||||||||||||||||||| ||||||| ||||||||||  | ||||   ||||||| ||||||||||||    
T  20879411 aattgattgttaaaagtgtaggtaatccaatgaattaacataagaattgatgttcaggttgtagaataacaataggtaatgtttcctgtcaaatttggga 20879312  T
Q  299 t 299  Q
    |    
T  20879311 t 20879311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 200 - 285
Target Start/End: Original strand, 22610380 - 22610466
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcct 285  Q
    ||||||||||| ||||||||||||||||| ||||||||| |||| | ||| ||||||  ||||||||||||| ||||||||||||||    
T  22610380 aattgattgttgaaagagtaggtaatccattgaattaacgtaaggaatgaggttcagattgtagaataaacataggttgagtttcct 22610466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 285
Target Start/End: Complemental strand, 23884107 - 23884021
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcct 285  Q
    ||||||||||| |||||||||||||  || ||||||||| |||| | ||||||||||  ||||||||||||| ||||||||||||||    
T  23884107 aattgattgttgaaagagtaggtaaatcattgaattaacgtaaggaatgaagttcagattgtagaataaacataggttgagtttcct 23884021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 301
Target Start/End: Original strand, 36732598 - 36732700
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| ||||||||||||| ||| ||||||||| |||| |  || ||||||  |||||||||| || ||||  |||||||||||||||||||||    
T  36732598 aattgattgttgaaagagtaggtaaaccattgaattaacgtaaggaaggaggttcagattgtagaataatcataggtcaagtttcctatcaaatttggga 36732697  T
Q  299 ttt 301  Q
    |||    
T  36732698 ttt 36732700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 74 - 115
Target Start/End: Complemental strand, 12577942 - 12577901
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaat 115  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  12577942 atcatcaatactaaggtaagggtgggactaactttctctaat 12577901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 4380616 - 4380654
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4380616 ctaaggtaagggtgggactaactttctctaattctaagt 4380654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 5761586 - 5761548
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5761586 ctaaggtaagggtgggactaactttctctaattctaagt 5761548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 8413901 - 8413959
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  8413901 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 8413959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 17906848 - 17906886
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17906848 ctaaggtaagggtgggactaactttctctaattctaagt 17906886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 20022039 - 20022077
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20022039 ctaaggtaagggtgggactaactttctctaattctaagt 20022077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 22532131 - 22532169
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22532131 ctaaggtaagggtgggactaactttctctaattctaagt 22532169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 22536816 - 22536854
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22536816 ctaaggtaagggtgggactaactttctctaattctaagt 22536854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 23899986 - 23900052
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaaca 150  Q
    |||||||||||||| |||||||||||||||||||||||| || | ||||||| ||  ||||||||||    
T  23899986 ctaaggtaagggtgtgactaactttctctaattctaagtgatataactctgagaattgaatttaaca 23900052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 298
Target Start/End: Original strand, 20517172 - 20517269
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||| |||| |||||||||||| |||||||| |||| ||| || ||||||| ||||||||||  | ||||   ||||||||||||||||||||    
T  20517172 ttgattgttgaaagtgtaggtaatccaatgaattaatataaaaatcgatgttcaggttgtagaataacaataggtgatgtttcctatcaaatttggga 20517269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 211 - 267
Target Start/End: Original strand, 21676717 - 21676773
Alignment:
Q  211 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||||||||||| |||||||| |||| |||||| ||||||| ||||||||||    
T  21676717 aaagagtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataa 21676773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 25483594 - 25483653
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    |||||||||| ||| ||| |||||||||| || ||||| |||||||||||||||||||||    
T  25483594 taagaattgatgtttaggttgtagaataatcataggttaagtttcctatcaaatttggga 25483653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 6101752 - 6101790
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  6101752 ctaaggtaaaggtgggactaactttctctaattctaagt 6101790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 19882843 - 19882789
Alignment:
Q  243 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  19882843 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 19882789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 20397509 - 20397547
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  20397509 ctaaggtaagggtgggattaactttctctaattctaagt 20397547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 22254819 - 22254781
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  22254819 ctaaggtaatggtgggactaactttctctaattctaagt 22254781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 31722492 - 31722530
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  31722492 ctaagataagggtgggactaactttctctaattctaagt 31722530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 36727037 - 36727075
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  36727037 ctaaggtaagggtgagactaactttctctaattctaagt 36727075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 45469218 - 45469256
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  45469218 ctaaggtaagggtgagactaactttctctaattctaagt 45469256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 18761500 - 18761463
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  18761500 taaggtaagggtgcgactaactttctctaattctaagt 18761463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 20083638 - 20083675
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  20083638 taaggtaagggtgagactaactttctctaattctaagt 20083675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 294
Target Start/End: Complemental strand, 22345059 - 22344966
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaattt 294  Q
    ||||||||| |||| |||||||||||| |||||||| |||| ||| || ||||||| ||||||||||  | ||||   ||||||||||||||||    
T  22345059 ttgattgttgaaagtgtaggtaatccaatgaattaatataaaaatcgatgttcaggttgtagaataacaataggtgatgtttcctatcaaattt 22344966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 294
Target Start/End: Complemental strand, 22356719 - 22356626
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaattt 294  Q
    ||||||||| |||| |||||||||||| |||||||| |||| ||| || ||||||| ||||||||||  | ||||   ||||||||||||||||    
T  22356719 ttgattgttgaaagtgtaggtaatccaatgaattaatataaaaatcgatgttcaggttgtagaataacaataggtgatgtttcctatcaaattt 22356626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 39936007 - 39936044
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||| |||||||||||||||||||||    
T  39936007 taaggtaagggtgggattaactttctctaattctaagt 39936044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 42817907 - 42817944
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||| |||||||||||||||||||    
T  42817907 taaggtaagggtgggacttactttctctaattctaagt 42817944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 115
Target Start/End: Original strand, 22610266 - 22610297
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaat 115  Q
    ||||||||||||||||||||||||||||||||    
T  22610266 ctaaggtaagggtgggactaactttctctaat 22610297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 115
Target Start/End: Original strand, 41680116 - 41680163
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaat 115  Q
    ||||| ||||||||||||||||||| |||||||||||| |||| ||||    
T  41680116 ccgccgatcatcaatactaaggtaaaggtgggactaaccttctttaat 41680163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 123
Target Start/End: Complemental strand, 17218754 - 17218716
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagta 123  Q
    |||| |||||||||||||||||||||||| |||||||||    
T  17218754 taagataagggtgggactaactttctctagttctaagta 17218716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 19700214 - 19700176
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  19700214 ctaaggtaagggtgggactaaccttctttaattctaagt 19700176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 22317910 - 22317948
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||| ||| ||||||||||||    
T  22317910 ctaaggtaagggtgggactaaccttcactaattctaagt 22317948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 23419494 - 23419456
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  23419494 ctaaggtaagggtgggactaaccttctttaattctaagt 23419456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 119
Target Start/End: Complemental strand, 34758915 - 34758885
Alignment:
Q  89 gtaagggtgggactaactttctctaattcta 119  Q
    |||||||||||||||||||||||||||||||    
T  34758915 gtaagggtgggactaactttctctaattcta 34758885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 119
Target Start/End: Complemental strand, 37292753 - 37292723
Alignment:
Q  89 gtaagggtgggactaactttctctaattcta 119  Q
    |||||||||||||||||||||||||||||||    
T  37292753 gtaagggtgggactaactttctctaattcta 37292723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 122
Target Start/End: Original strand, 6573060 - 6573093
Alignment:
Q  89 gtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||| ||||||||||||||||||||||||    
T  6573060 gtaagggtgagactaactttctctaattctaagt 6573093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 19140816 - 19140780
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  19140816 taaggtaagggtgggacta-ctttctctaattctaagt 19140780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 100
Target Start/End: Original strand, 22237033 - 22237065
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtggga 100  Q
    ||||| |||||||||||||||||||||||||||    
T  22237033 ccgccgatcatcaatactaaggtaagggtggga 22237065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 178; Significance: 5e-96; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 68 - 301
Target Start/End: Original strand, 15900637 - 15900870
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaatt 167  Q
    ||||| ||| |||||||||||||||||||| ||| ||||||||||||||||||||| ||| | ||||||||| | |||||||||||||||| ||||||||    
T  15900637 ccgccgatcttcaatactaaggtaagggtgagaccaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaatt 15900736  T
Q  168 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||    
T  15900737 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtaaaataa 15900836  T
Q  268 acagaggttgagtttcctatcaaatttgggattt 301  Q
    ||| ||||||||||||||||||||||||||||||    
T  15900837 acataggttgagtttcctatcaaatttgggattt 15900870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 68 - 301
Target Start/End: Original strand, 15173436 - 15173669
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaatt 167  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| | ||||||||| | ||||||  |||||||| ||||||||    
T  15173436 ccgccgatcatcaatactaaggtaatggtgggactaactttctctaattctaagtattttaattctgaaaactggatttaatgtgatgtaggtggtaatt 15173535  T
Q  168 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||| |||||| ||||    
T  15173536 ttgatgattaaagaaattaggttttggtttggaattgattgttaaagaataggtaattcaatgaattaacataagaattgaagttcagcctgtaggataa 15173635  T
Q  268 acagaggttgagtttcctatcaaatttgggattt 301  Q
    ||| ||||||||||||||||||||||||||||||    
T  15173636 acataggttgagtttcctatcaaatttgggattt 15173669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 145 - 301
Target Start/End: Original strand, 15891629 - 15891785
Alignment:
Q  145 ttaacatgatgtagatggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaa 244  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  15891629 ttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaa 15891728  T
Q  245 ttgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  15891729 ttgaagttcaggctgtaaaataaacataggttgagtttcctatcaaatttgggattt 15891785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 23415804 - 23415742
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23415804 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggattt 23415742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 27557558 - 27557500
Alignment:
Q  243 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||    
T  27557558 aattgaagttcaggttgtagaataaacataggttgagttttctatcaaatttgggattt 27557500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 200 - 301
Target Start/End: Complemental strand, 29045202 - 29045100
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| ||||||||||||||||  |||| |||  ||| |||||| ||||||| |||||||||| || |||| |||||| |||||||||||||||    
T  29045202 aattgattgttgaaagagtaggtaatccgatgaactaaggtaataattgatgttcaggttgtagaataatcataggtagagttttctatcaaatttggga 29045103  T
Q  299 ttt 301  Q
    |||    
T  29045102 ttt 29045100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 285
Target Start/End: Complemental strand, 1818890 - 1818804
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcct 285  Q
    ||||||||||| |||||||||||||| || ||||||||| |||| | ||| ||||||  ||||||||||||| ||||||||||||||    
T  1818890 aattgattgttgaaagagtaggtaattcattgaattaacgtaaggaatgaggttcagattgtagaataaacataggttgagtttcct 1818804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 27329964 - 27330015
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattcta 119  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||||||||    
T  27329964 ccgccgatcatcaatactaaggtaagagtgtgactaactttctctaattcta 27330015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 27390704 - 27390755
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattcta 119  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||||||||    
T  27390704 ccgccgatcatcaatactaaggtaagagtgtgactaactttctctaattcta 27390755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 13765246 - 13765188
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  13765246 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 13765188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 15890711 - 15890749
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15890711 ctaaggtaagggtgggactaactttctctaattctaagt 15890749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 23956762 - 23956704
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  23956762 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 23956704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 28288659 - 28288717
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  28288659 taagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggg 28288717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 31021874 - 31021932
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  31021874 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 31021932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 7828024 - 7827987
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7828024 taaggtaagggtgggactaactttctctaattctaagt 7827987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 23150287 - 23150324
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23150287 taaggtaagggtgggactaactttctctaattctaagt 23150324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 23226010 - 23226066
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttg 295  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||    
T  23226010 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttg 23226066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 24267900 - 24267864
Alignment:
Q  86 aaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||    
T  24267900 aaggtaagggtgggactaactttctctaattctaagt 24267864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 12943029 - 12942971
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||  ||||||||||| | ||||||||||||||||||||||||||    
T  12943029 taagaatcgatgttcagattgtagaataaatataggttgagtttcctatcaaatttggg 12942971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 15998942 - 15998904
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  15998942 ctaaggtaagggtgagactaactttctctaattctaagt 15998904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 18585615 - 18585549
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||| |||| ||| ||||| || |||||||||||||||||||| ||||||| ||||||||||    
T  18585615 ttgattgttgaaagtgtatgtaattcaatgaattaacataagaattgatgttcaggttgtagaataa 18585549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 122
Target Start/End: Complemental strand, 18585854 - 18585820
Alignment:
Q  88 ggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||    
T  18585854 ggtaagggtgggactaactttctctaattctaagt 18585820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 18928734 - 18928696
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  18928734 ctaaggtaagggtaggactaactttctctaattctaagt 18928696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 28948628 - 28948590
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  28948628 ctaaggtaagggtgagactaactttctctaattctaagt 28948590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 31731903 - 31731941
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  31731903 ctaaggtaagggtgggactaactttctccaattctaagt 31731941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 18703620 - 18703583
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  18703620 taaggtaagtgtgggactaactttctctaattctaagt 18703583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 18709555 - 18709518
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  18709555 taaggtaagtgtgggactaactttctctaattctaagt 18709518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 19655231 - 19655268
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  19655231 taaggtaagggtgagactaactttctctaattctaagt 19655268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 27125477 - 27125514
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  27125477 taaggtaagggtgagactaactttctctaattctaagt 27125514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 27572122 - 27572159
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  27572122 taaggtaagggtgagactaactttctctaattctaagt 27572159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 27852269 - 27852220
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagta 123  Q
    |||||||||||||||||||||||||||||||| |||  | ||||||||||    
T  27852269 atcatcaatactaaggtaagggtgggactaaccttcaatcattctaagta 27852220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 28103431 - 28103467
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaa 104  Q
    ||||| |||||||||||||||||||||||||||||||    
T  28103431 ccgccgatcatcaatactaaggtaagggtgggactaa 28103467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 20556185 - 20556244
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||| ||| |||||||||||    
T  20556185 taagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggga 20556244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 301
Target Start/End: Complemental strand, 10446134 - 10446048
Alignment:
Q  215 agtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||  || ||||||||| |||| | ||| ||||||  | ||||||||||| |||||||||||||| |  ||||||||||||    
T  10446134 agtaggtaaagcattgaattaacgtaaggaatgaggttcagattatagaataaacataggttgagtttccttttgaatttgggattt 10446048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 12041619 - 12041657
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  12041619 ctaaggtaagggtgggactaaccttctttaattctaagt 12041657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 119
Target Start/End: Complemental strand, 29625231 - 29625201
Alignment:
Q  89 gtaagggtgggactaactttctctaattcta 119  Q
    |||||||||||||||||||||||||||||||    
T  29625231 gtaagggtgggactaactttctctaattcta 29625201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 19401146 - 19401109
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||| ||| ||||||||||||    
T  19401146 taaggtaagggtgggactaaccttcactaattctaagt 19401109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 116
Target Start/End: Original strand, 30673401 - 30673433
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaatt 116  Q
    ||||||||||||||||| |||||||||||||||    
T  30673401 ctaaggtaagggtgggattaactttctctaatt 30673433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 177; Significance: 2e-95; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 85 - 301
Target Start/End: Original strand, 10694245 - 10694461
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaattttgatgattagagaaat 184  Q
    ||||||||||||| |||||| |||||||||||||||||||||| | |||||||||   |||||||||||||||| |||||||||||||||||||||||||    
T  10694245 taaggtaagggtgagactaaatttctctaattctaagtaatttaattctgaaaactcgatttaacatgatgtaggtggtaattttgatgattagagaaat 10694344  T
Q  185 taggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcc 284  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10694345 taggttttggtttggaattgattgttaaagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcc 10694444  T
Q  285 tatcaaatttgggattt 301  Q
    |||||||||||||||||    
T  10694445 tatcaaatttgggattt 10694461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 68 - 301
Target Start/End: Complemental strand, 40620601 - 40620368
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaatt 167  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||| | ||||||||  | |||||||||||||||| ||||||||    
T  40620601 ccgccgatcatcaatactaaggtaagggtgggaataactttctctaattctaagtattttaattctgaaaattggatttaacatgatgtaggtggtaatt 40620502  T
Q  168 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||| ||||    
T  40620501 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggccgtaggataa 40620402  T
Q  268 acagaggttgagtttcctatcaaatttgggattt 301  Q
    ||| |||||||||||||| |||||||||||||||    
T  40620401 acataggttgagtttcctctcaaatttgggattt 40620368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 85 - 295
Target Start/End: Original strand, 10908011 - 10908221
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaattttgatgattagagaaat 184  Q
    ||||||||||||| |||||| |||||||||||||||||||||| | |||||||||   |||||||||||||||| |||||||||||||||||||||||||    
T  10908011 taaggtaagggtgagactaaatttctctaattctaagtaatttaattctgaaaactcgatttaacatgatgtaggtggtaattttgatgattagagaaat 10908110  T
Q  185 taggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcc 284  Q
    |||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10908111 taggttttggtttggaattgattgttaaagagtaggtaattcaattaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcc 10908210  T
Q  285 tatcaaatttg 295  Q
    |||||||||||    
T  10908211 tatcaaatttg 10908221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 68 - 301
Target Start/End: Complemental strand, 15009032 - 15008804
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctg-aaaacggaatttaacatgatgtagatggtaat 166  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||| ||||| | |||||||||||||||| |||||||    
T  15009032 ccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaaactggatttaacatgatgtaggtggtaat 15008933  T
Q  167 tttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaata 266  Q
    ||||||||||||||||||||||||||      ||||||||||||||||||| |||||| || |||||||||||||||||| |||||||||||||||||||    
T  15008932 tttgatgattagagaaattaggtttt------gaattgattgttaaagagttggtaattcaatgaattaacataagaattaaagttcaggctgtagaata 15008839  T
Q  267 aacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||| |||||||||||||||| |||||||||||||    
T  15008838 aacataggttgagtttcctataaaatttgggattt 15008804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 301
Target Start/End: Complemental strand, 35660862 - 35660724
Alignment:
Q  165 attttgatgattagagaaattaggttttgg-tttggaattgattgttaa-agagtaggtaatccagtgaattaacataagaattgaagttcaggctgtag 262  Q
    |||||||||||||||||||||||| ||||  |||  ||||||||||| | ||||||||||||||  |||| |||  ||| |||||  ||||||| |||||    
T  35660862 attttgatgattagagaaattagggtttgaatttaaaattgattgttgagagagtaggtaatccgatgaagtaaggtaataattggtgttcaggttgtag 35660763  T
Q  263 aataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    ||||| || | ||| ||||||||||||||||||||||||    
T  35660762 aataatcatatgttaagtttcctatcaaatttgggattt 35660724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 294
Target Start/End: Complemental strand, 9622425 - 9622330
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaattt 294  Q
    ||||||||||| ||||||||||||||||| ||||||||| |||| | ||| ||||||  ||||||||||||| |||||||||||||| | ||||||    
T  9622425 aattgattgttgaaagagtaggtaatccattgaattaacgtaaggaatgaggttcagattgtagaataaacataggttgagtttccttttaaattt 9622330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 68 - 122
Target Start/End: Complemental strand, 14187027 - 14186973
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14187027 ccgccgatcatcaatactaaggtaagggtgggagtaactttctctaattctaagt 14186973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 200 - 301
Target Start/End: Complemental strand, 16296809 - 16296707
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| ||||||||||||||||  ||||||||  ||| |||||  ||||||| ||| |||||| || ||||| |||||||||||||||||||||    
T  16296809 aattgattgttgaaagagtaggtaatccgatgaattaaggtaataattggtgttcaggttgttgaataatcataggttaagtttcctatcaaatttggga 16296710  T
Q  299 ttt 301  Q
    |||    
T  16296709 ttt 16296707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 19434775 - 19434875
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 300  Q
    ||||||||| |||||||||||||||   ||||||||   || |||||  ||||||| |||||||||| || ||||| |||||||||||||||||||||||    
T  19434775 ttgattgttgaaagagtaggtaatctgatgaattaaagaaataattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatt 19434874  T
Q  301 t 301  Q
    |    
T  19434875 t 19434875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 15115275 - 15115237
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15115275 ctaaggtaagggtgggactaactttctctaattctaagt 15115237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 19434558 - 19434596
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19434558 ctaaggtaagggtgggactaactttctctaattctaagt 19434596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 21062694 - 21062656
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  21062694 ctaaggtaagggtgggactaactttctctaattctaagt 21062656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 28386143 - 28386085
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  28386143 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 28386085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 33849642 - 33849584
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||| | ||||||||||||| ||||||||||||||||||||||||||    
T  33849642 taagaatcgatgttcatgttgtagaataaacataggttgagtttcctatcaaatttggg 33849584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 36038710 - 36038652
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  36038710 taagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggg 36038652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 49547096 - 49547154
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  49547096 taagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggg 49547154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 11425995 - 11425958
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11425995 taaggtaagggtgggactaactttctctaattctaagt 11425958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 25091705 - 25091668
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25091705 taaggtaagggtgggactaactttctctaattctaagt 25091668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 35811376 - 35811413
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35811376 taaggtaagggtgggactaactttctctaattctaagt 35811413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 53630474 - 53630511
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  53630474 taaggtaagggtgggactaactttctctaattctaagt 53630511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 14549586 - 14549486
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 300  Q
    ||||||||| |||||||| ||||||   ||||||||  ||| |||||  ||||||| |||||||||| || | ||| |||||||||||||||||||||||    
T  14549586 ttgattgttgaaagagtatgtaatctgatgaattaaggtaataattggtgttcaggttgtagaataatcatatgttaagtttcctatcaaatttgggatt 14549487  T
Q  301 t 301  Q
    |    
T  14549486 t 14549486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 10057730 - 10057675
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagta 123  Q
    ||||| |||||||||||||||||||||||||||||||| |||  ||||||| ||||    
T  10057730 ccgccgatcatcaatactaaggtaagggtgggactaaccttcaataattctgagta 10057675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 15344834 - 15344775
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||| |||||||||||    
T  15344834 taagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttggga 15344775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 2424386 - 2424424
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  2424386 ctaaggtaagggtgagactaactttctctaattctaagt 2424424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 9924207 - 9924169
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  9924207 ctaaggtaagggtgagactaactttctctaattctaagt 9924169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 14549813 - 14549775
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  14549813 ctaaggtaagggtgagactaactttctctaattctaagt 14549775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 15535021 - 15534963
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||  ||||||||||||| | ||||||||||||||||||||||||    
T  15535021 taagaatcgatgttcagattgtagaataaacatatgttgagtttcctatcaaatttggg 15534963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 16277440 - 16277498
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| |||||||  ||||||||| || ||||| ||||||||||||||||||||    
T  16277440 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 16277498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 18230640 - 18230578
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| ||||||| ||||| |||| || ||| | ||||||||||||||||||||||||    
T  18230640 taagaattgatgttcaggttgtaggataatcataggataagtttcctatcaaatttgggattt 18230578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 53387050 - 53387108
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| |||||||  ||||||||| || ||||| ||||||||||||||||||||    
T  53387050 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 53387108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 10356436 - 10356473
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||| |||||||||||||||||||||||||||    
T  10356436 taaggtaaggttgggactaactttctctaattctaagt 10356473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 11478652 - 11478728
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagat 160  Q
    |||||||||||||| ||||||||| ||||||||||||||  | | | ||||||||  |||||||||| | |||||||    
T  11478652 ctaaggtaagggtgagactaacttcctctaattctaagtggtataattctgaaaattgaatttaacaagttgtagat 11478728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 18462959 - 18462859
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 300  Q
    ||||||||| |||| |||||||||||| ||||||||||| | |||||| ||||||  ||||||| ||  | ||||   ||||||| ||||||||||||||    
T  18462959 ttgattgttgaaagtgtaggtaatccaatgaattaacatgaaaattgatgttcagattgtagaacaacaataggtaatgtttcctgtcaaatttgggatt 18462860  T
Q  301 t 301  Q
    |    
T  18462859 t 18462859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 12611810 - 12611751
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||| ||| |||||||||||    
T  12611810 taagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggga 12611751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 119
Target Start/End: Original strand, 6633541 - 6633571
Alignment:
Q  89 gtaagggtgggactaactttctctaattcta 119  Q
    |||||||||||||||||||||||||||||||    
T  6633541 gtaagggtgggactaactttctctaattcta 6633571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 14186105 - 14186067
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||| ||||||||| |||||||||||    
T  14186105 ctaaggtaagggtgggagtaactttctttaattctaagt 14186067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 14477568 - 14477502
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||| |||| |||||||||||| ||||||||||||  |||||| ||||||  ||||||||||    
T  14477568 ttgattgttgaaagtgtaggtaatccaatgaattaacatagaaattgatgttcagattgtagaataa 14477502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 15613143 - 15613105
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  15613143 ctaaggtaagggtgggactaaccttctttaattctaagt 15613105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 37019723 - 37019685
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  37019723 ctaaggtaagggtgtgactaactttctctaattttaagt 37019685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 51993614 - 51993576
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  51993614 ctaaggtaagggtgggactaaccttctttaattctaagt 51993576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 16998577 - 16998540
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  16998577 taaggtaagagtgagactaactttctctaattctaagt 16998540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 19610376 - 19610339
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  19610376 taaggtaagggtgagactaactttctctaattttaagt 19610339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 42875849 - 42875812
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||| | |||||||||||    
T  42875849 taaggtaagggtgggactaactttatataattctaagt 42875812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 176; Significance: 8e-95; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 74 - 301
Target Start/End: Complemental strand, 9023 - 8796
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaattttgatg 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||| ||||| |||||||||||| ||||||||||||||    
T  9023 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaactgaattgaacatgatgtaggtggtaattttgatg 8924  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagag 273  Q
    |  || ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||    
T  8923 agaagggaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacatag 8824  T
Q  274 gttgagtttcctatcaaatttgggattt 301  Q
    |||||||||||||||||||||| |||||    
T  8823 gttgagtttcctatcaaatttgagattt 8796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 176; Significance: 8e-95; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 74 - 301
Target Start/End: Complemental strand, 2000 - 1773
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaattttgatg 173  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||| ||| | ||||||||||| |||||||||||||||| ||||||||||||||    
T  2000 atcatcaatactaaggaaagggtgggactaactttatctaattctaagtattttaattctgaaaacggtatttaacatgatgtaggtggtaattttgatg 1901  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagag 273  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||    
T  1900 attagagaaattattttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacatag 1801  T
Q  274 gttgagtttcctatcaaatttgggattt 301  Q
    ||||||||||||||||||||| ||||||    
T  1800 gttgagtttcctatcaaattttggattt 1773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 5044 - 5082
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5044 ctaaggtaagggtgggactaactttctctaattctaagt 5082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 10754 - 10792
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10754 ctaaggtaagggtgggactaactttctctaattctaagt 10792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 74 - 301
Target Start/End: Original strand, 21766 - 21993
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaattttgatg 173  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||| | | ||||||| | |||||||||||||||| ||||||||||||||    
T  21766 atcatcaatactaaggtaaggatgggactaactttctctaattctaagtattttaaatttgaaaactggatttaacatgatgtaggtggtaattttgatg 21865  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagag 273  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||| ||    
T  21866 attagagaaattaggttttggtttgaaaatgattgttaaagagtaggtaattcaatgaattaacataagaattgatgttcaggctgtagaataaacatag 21965  T
Q  274 gttgagtttcctatcaaatttgggattt 301  Q
    ||||||||||||||||||||||||||||    
T  21966 gttgagtttcctatcaaatttgggattt 21993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 74 - 296
Target Start/End: Complemental strand, 5092 - 4877
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaattttgatg 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||| ||||||||||||||    
T  5092 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatg 4993  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagag 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||       ||||||||||| ||    
T  4992 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccaatgaattaacataagaattgaagtt-------tagaataaacatag 4900  T
Q  274 gttgagtttcctatcaaatttgg 296  Q
    |||||||||||| ||||||||||    
T  4899 gttgagtttcctttcaaatttgg 4877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 74 - 296
Target Start/End: Complemental strand, 5092 - 4877
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaattttgatg 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||| ||||||||||||||    
T  5092 atcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatg 4993  T
Q  174 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagag 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||       ||||||||||| ||    
T  4992 attagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccaatgaattaacataagaattgaagtt-------tagaataaacatag 4900  T
Q  274 gttgagtttcctatcaaatttgg 296  Q
    |||||||||||| ||||||||||    
T  4899 gttgagtttcctttcaaatttgg 4877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 68 - 301
Target Start/End: Complemental strand, 11292 - 11059
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaatt 167  Q
    ||||| |||||||||||||||||||||||| | ||||||||||||||||| ||||| ||| | |||||||||   ||||||||| |||||| ||||||||    
T  11292 ccgccgatcatcaatactaaggtaagggtgagtctaactttctctaattccaagtattttaattctgaaaactagatttaacataatgtaggtggtaatt 11193  T
Q  168 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  11192 ttgatgattagagaaattaggttttgatttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 11093  T
Q  268 acagaggttgagtttcctatcaaatttgggattt 301  Q
    ||| |  |||||||||||||||||||||||||||    
T  11092 acatatcttgagtttcctatcaaatttgggattt 11059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 166 - 297
Target Start/End: Original strand, 14667 - 14798
Alignment:
Q  166 ttttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaat 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||| ||||||||    
T  14667 ttttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatctaataaattaacataagaattgaagttcaggttgtagaat 14766  T
Q  266 aaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||| ||||||||||||||||||||||||||    
T  14767 aaacataggttgagtttcctatcaaatttggg 14798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 166 - 297
Target Start/End: Original strand, 23725 - 23856
Alignment:
Q  166 ttttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaat 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||| ||||||||    
T  23725 ttttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatctaataaattaacataagaattgaagttcaggttgtagaat 23824  T
Q  266 aaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||| ||||||||||||||||||||||||||    
T  23825 aaacataggttgagtttcctatcaaatttggg 23856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 110; Significance: 2e-55; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 68 - 217
Target Start/End: Complemental strand, 6437 - 6288
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaacatgatgtagatggtaatt 167  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||| | | ||||||| | |||| ||||||||||| ||||||||    
T  6437 ccgccgatcatcaatactaatgtaagggtgggactaactttctctaattctaagtattttaattttgaaaactggatttgacatgatgtaggtggtaatt 6338  T
Q  168 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6337 ttgatgattagagaaattaggttttggtttggaattgattgttaaagagt 6288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 39965 - 40027
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| ||||||| |||||||||| || ||||| |||||||||||||| |||||||||    
T  39965 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaaattgggattt 40027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 267
Target Start/End: Original strand, 59771 - 59837
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||| ||| ||||||||||||| |||||||| |||| |||||| ||| ||| ||||||||||    
T  59771 ttgattgttgaaatagtaggtaatccaatgaattaatataaaaattgatgtttaggttgtagaataa 59837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 200 - 298
Target Start/End: Complemental strand, 12178 - 12080
Alignment:
Q  200 aattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||| |||||||||| || ||||   ||||||||||||||||||||    
T  12178 aattgattgttaaagagtaggtaacccaatgaattaacataagaattgatgttcaggttgtagaataatcataggtgatgtttcctatcaaatttggga 12080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 165 - 301
Target Start/End: Original strand, 43866 - 44003
Alignment:
Q  165 attttgatgattagagaaattaggttttggtttggaattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtaga 263  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||| |||| || | |||||   ||  |||||| ||| ||| ||||||    
T  43866 attttgatgattagagaaattaggttttgatttggaattgattgttgaaaaagtagataattcaattaattagtgtacaaattgatgtttaggttgtaga 43965  T
Q  264 ataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    ||||||| ||||||||||||||||  ||||||||||||    
T  43966 ataaacataggttgagtttcctattgaatttgggattt 44003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 301
Target Start/End: Original strand, 39174 - 39311
Alignment:
Q  165 attttgatgattagagaaattaggttttggtttggaattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtaga 263  Q
    ||||||||  ||||||||||||||||||| |||||||||||||||| ||| ||||| |||| || |||||||   ||  |  | | ||||||| ||||||    
T  39174 attttgatctttagagaaattaggttttgatttggaattgattgttgaaaaagtagataattcaatgaattagtgtacaagataatgttcaggttgtaga 39273  T
Q  264 ataaacagaggttgagtttcctatcaaatttgggattt 301  Q
     |||||| ||||||| ||||||||  ||||||||||||    
T  39274 ttaaacataggttgaatttcctattgaatttgggattt 39311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 18493 - 18431
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18493 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggattt 18431  T

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Target: scaffold0113 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 211 - 301
Target Start/End: Complemental strand, 35418 - 35328
Alignment:
Q  211 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||| ||| |||||||| | |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||  ||||||||||||    
T  35418 aaagtgtatgtaatccaataaattaacataagaattgatgttcaggttgtagaataaacataggttgagtttcctattgaatttgggattt 35328  T

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Target: scaffold0113; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 35543 - 35505
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  35543 ctaaggtaagggtgagactaactttctctaattctaagt 35505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 239 - 299
Target Start/End: Original strand, 19452 - 19512
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggat 299  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  19452 taagaattgaagttcaggctgtagaataaacataagttgagtttcctatcaaatttgggat 19512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 42571 - 42509
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||    
T  42571 taagaattgaagttcaggctgtagaataaacctaggttgagtttcctatcaaatttggaattt 42509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 301
Target Start/End: Original strand, 5695 - 5832
Alignment:
Q  165 attttgatgattagagaaattaggttttggtttggaattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtaga 263  Q
    |||||||||||||||||||||||||||||  |  |||||||||||| ||| | ||| |||| || |||||||   ||  |||||| ||||||| ||||||    
T  5695 attttgatgattagagaaattaggttttgaatcagaattgattgttgaaaaactagataattcaatgaattagtgtacaaattgatgttcaggttgtaga 5794  T
Q  264 ataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    ||||||| ||||||||||||| ||  ||||||||||||    
T  5795 ataaacataggttgagtttcccattgaatttgggattt 5832  T

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Target: scaffold0086 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 301
Target Start/End: Original strand, 35565 - 35702
Alignment:
Q  165 attttgatgattagagaaattaggttttggtttggaa-ttgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtaga 263  Q
    ||||||||| ||||||||||||||||||| ||| ||| |||||||||||| ||||| |||| || |||||||   ||  |||||   |||||| ||||||    
T  35565 attttgatggttagagaaattaggttttgatttagaatttgattgttaaaaagtagataattcaatgaattagtgtacaaattgttattcaggttgtaga 35664  T
Q  264 ataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||| || ||||| ||||||||||||||||||| ||||    
T  35665 ataatcataggtttagtttcctatcaaatttggaattt 35702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 22058 - 21958
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 300  Q
    ||||||||| |||||||||||||||   ||||||||  |||||||||  ||||||| |||||||||| || ||||| |||||||||||||||||||||||    
T  22058 ttgattgttgaaagagtaggtaatctgatgaattaaggtaagaattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatt 21959  T
Q  301 t 301  Q
    |    
T  21958 t 21958  T

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Target: scaffold0026; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 146776 - 146738
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  146776 ctaaggtatgggtgggactaacttactctaattctaagt 146738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 7163 - 7221
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7163 taagaatcgatgttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 7221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 32042 - 31981
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    ||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  32042 taagagttgaagttcaggctgtagaataa-cataggttgagtttcctatcaaatttgggattt 31981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 122
Target Start/End: Complemental strand, 15340 - 15287
Alignment:
Q  69 cgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15340 cgccgatcatcattactaaggtaagggtgggactaactttctctaattctaagt 15287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 297
Target Start/End: Original strand, 8925 - 9009
Alignment:
Q  213 agagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| || | ||||||||| |||||||||| ||||||| ||||||||||||  ||||||||||||||||  ||||||||    
T  8925 agagtaggtagtcgaatgaattaacgtaagaattgatgttcaggttgtagaataaacttaggttgagtttcctattgaatttggg 9009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 117805 - 117893
Alignment:
Q  83 actaaggtaagggtgggactaactttctctaattctaagtaatttcactctg-aaaacggaatttaacatgatgtagatggtaattttg 170  Q
    |||||||||||||||||||||||||||||||||||||||| || | |||||| ||||  |||||||||| | || |||| |||||||||    
T  117805 actaaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaaattgaatttaacaagttgaagattgtaattttg 117893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 112965 - 113052
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttcactctg-aaaacggaatttaacatgatgtagatggtaattttg 170  Q
    ||||| ||||||||||||||||||||||||||||||||| || | |||||| ||||  |||||||||| | ||||| | |||||||||    
T  112965 ctaagataagggtgggactaactttctctaattctaagtgatataactctgaaaaattgaatttaacaagttgtaggttgtaattttg 113052  T

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Target: scaffold0802 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 4708 - 4774
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaaca 150  Q
    |||||||||||||||||||||||||||||||||||||||| | | | ||||||||  ||||||||||    
T  4708 ctaaggtaagggtgggactaactttctctaattctaagtagtataattctgaaaattgaatttaaca 4774  T

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Target: scaffold0031 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 301
Target Start/End: Original strand, 127459 - 127561
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| ||||||||||||| ||| ||||||||| |||| | ||| |||||   ||||||||||||| |||||||||||||| |  |||||||||    
T  127459 aattgattgttgaaagagtaggtaaaccattgaattaacgtaaggaatgaggttcaaattgtagaataaacataggttgagtttccttttgaatttggga 127558  T
Q  299 ttt 301  Q
    |||    
T  127559 ttt 127561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 169339 - 169281
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||||||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  169339 taagaattgaagttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 169281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 176692 - 176634
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||||||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  176692 taagaattgaagttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 176634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 77740 - 77702
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  77740 ctaaggtaagggtgagactaactttctctaattctaagt 77702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 32046 - 32009
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  32046 taaggtaagggtgtgactaactttctctaattctaagt 32009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 37353 - 37316
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  37353 taaggtaagggtgtgactaactttctctaattctaagt 37316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 191 - 153
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  191 ctaaggtaagggtgggactaactttctctaattctaagt 153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 2248 - 2310
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||| ||||    
T  2248 taagaattgatgttcaggttgtagaataatcacaggttaagtttcctatcaaatttggcattt 2310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 122
Target Start/End: Complemental strand, 2604 - 2570
Alignment:
Q  88 ggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||    
T  2604 ggtaagggtgggactaactttctctaattctaagt 2570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 200 - 301
Target Start/End: Complemental strand, 2178 - 2076
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| ||||||||||||||||  |||| |||  ||| |||||  ||||||| |||||||||| || |||| || ||| |||||||||||||||    
T  2178 aattgattgttgaaagagtaggtaatccgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagatttttctatcaaatttggga 2079  T
Q  299 ttt 301  Q
    |||    
T  2078 ttt 2076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 3863 - 3805
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    ||||||| || ||||||| ||| ||||||||| ||||||||||||||||||||||||||    
T  3863 taagaatcgatgttcaggttgttgaataaacataggttgagtttcctatcaaatttggg 3805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 8063 - 8005
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  8063 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 8005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 20007 - 19969
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20007 ctaaggtaagggtgggactaactttctctaattctaagt 19969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 17939 - 17977
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17939 ctaaggtaagggtgggactaactttctctaattctaagt 17977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 9994 - 9932
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| ||||||| |||||||||| || ||||| |||||||||||||| |||||||||    
T  9994 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaaattgggattt 9932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 17043 - 16977
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||| ||||||||||||||||| |||||||| |||| |||||| ||||||| ||||||||||    
T  17043 ttgattgttgaaagagtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataa 16977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 26574 - 26508
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||| ||||||||||||||||| |||||||| |||| |||||| ||||||| ||||||||||    
T  26574 ttgattgttgaaagagtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataa 26508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 1257 - 1220
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1257 taaggtaagggtgggactaactttctctaattctaagt 1220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 468 - 505
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  468 taaggtaagggtgggactaactttctctaattctaagt 505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 196 - 233
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  196 taaggtaagggtgggactaactttctctaattctaagt 233  T

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Target: scaffold0064 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 58798 - 58761
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  58798 taaggtaagggtgggactaactttctctaattctaagt 58761  T

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Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 78185 - 78222
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  78185 taaggtaagggtgggactaactttctctaattctaagt 78222  T

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Target: scaffold0019 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 24131 - 24168
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24131 taaggtaagggtgggactaactttctctaattctaagt 24168  T

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Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000002; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 301
Target Start/End: Original strand, 66194 - 66294
Alignment:
Q  200 aattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggat 299  Q
    |||||||| | ||||||||||||||||  |||| |||  ||| |||||  ||||||| |||||||||| || |||| |||||| ||||||||||||||||    
T  66194 aattgattttgaaagagtaggtaatccgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttt-ctatcaaatttgggat 66292  T
Q  300 tt 301  Q
    ||    
T  66293 tt 66294  T

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Target: scaffold0004; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 118
Target Start/End: Original strand, 328287 - 328321
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattct 118  Q
    |||||||||||||||||||||||||||||||||||    
T  328287 ctaaggtaagggtgggactaactttctctaattct 328321  T

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Target: scaffold0004; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 110222 - 110161
Alignment:
Q  89 gtaagggtgggactaactttctctaattctaagtaatttcactctgaaaacggaatttaaca 150  Q
    ||||||||| |||||||||||||||||||||||| || | | ||||||||  ||||||||||    
T  110222 gtaagggtgagactaactttctctaattctaagtgatataattctgaaaattgaatttaaca 110161  T

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Target: scaffold0004; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 115
Target Start/End: Complemental strand, 73139 - 73109
Alignment:
Q  85 taaggtaagggtgggactaactttctctaat 115  Q
    |||||||||||||||||||||||||||||||    
T  73139 taaggtaagggtgggactaactttctctaat 73109  T

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Target: scaffold1939 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 65 - 1
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtaga 263  Q
    ||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||| | ||||||    
T  65 aattgattgttgaaagagtaggtaatccaaagaattaacataagaattgatgttcatgttgtaga 1  T

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Target: scaffold0217 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 28650 - 28550
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 300  Q
    ||||||||| |||| |||||||||| | ||||||||||||| |||||| ||||||| ||||||||||  | | ||   ||||||| ||||||||||||||    
T  28650 ttgattgttgaaagtgtaggtaatctaatgaattaacataaaaattgatgttcaggttgtagaataataatacgtaatgtttcctgtcaaatttgggatt 28551  T
Q  301 t 301  Q
    |    
T  28550 t 28550  T

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Target: scaffold0577 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 9128 - 9073
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagta 123  Q
    ||||| |||||||||||||||||||||||||||||||| |||  ||||||| ||||    
T  9128 ccgccgatcatcaatactaaggtaagggtgggactaaccttcagtaattctgagta 9073  T

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Target: scaffold0077 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 120
Target Start/End: Complemental strand, 34391 - 34356
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaa 120  Q
    ||||||||||||||||||||||||||||||||||||    
T  34391 taaggtaagggtgggactaactttctctaattctaa 34356  T

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Target: scaffold0077; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 6003 - 5965
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  6003 ctaaggtaagggtgggactaaccttctttaattctaagt 5965  T

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Target: scaffold1766 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 695 - 733
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  695 ctaaggtaggggtgggactaactttctctaattctaagt 733  T

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Target: scaffold1276 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 1039 - 977
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    ||||| |||| ||||||| ||||| |||| || ||||| ||||||||||||||||||||||||    
T  1039 taagagttgatgttcaggttgtaggataatcataggttaagtttcctatcaaatttgggattt 977  T

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Target: scaffold1256 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 2199 - 2237
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  2199 ctaaggtaagggtgggactaattttctctaattctaagt 2237  T

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Target: scaffold0819 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 122
Target Start/End: Complemental strand, 5435 - 5381
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||| ||||| ||| |||||||||||||||||||||| ||| ||||||||||||    
T  5435 ccgccgatcattaattctaaggtaagggtgggactaaccttcactaattctaagt 5381  T

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Target: scaffold0676 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 301
Target Start/End: Complemental strand, 2752 - 2650
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| |||||||||||||||   ||||||||  ||| |||||  ||||||  ||| |||||| || | ||| |||||||||||||||||||||    
T  2752 aattgattgttgaaagagtaggtaatctgatgaattaaggtaataattggtgttcagattgttgaataatcatacgttaagtttcctatcaaatttggga 2653  T
Q  299 ttt 301  Q
    |||    
T  2652 ttt 2650  T

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Target: scaffold0632 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 122
Target Start/End: Complemental strand, 1234 - 1180
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||| || ||||||||||||||||||||| ||||||||||  ||||||||||||    
T  1234 ccgccgattatcaatactaaggtaagggtgtgactaacttttcctaattctaagt 1180  T

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Target: scaffold0628 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 1057 - 1095
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  1057 ctaaggtaagggtgggactaactttctcttattctaagt 1095  T

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Target: scaffold0516 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 5304 - 5342
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  5304 ctaaggtaagggtgggactaactttctctaattttaagt 5342  T

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Target: scaffold0334 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 571 - 533
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  571 ctaaggtaagggtgagactaactttctctaattctaagt 533  T

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Target: scaffold0334; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 2024 - 1962
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| ||| ||| |||||||||| |  ||||| ||||||||||||||||||||||||    
T  2024 taagaattgatgtttaggttgtagaataatcgtaggttaagtttcctatcaaatttgggattt 1962  T

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Target: scaffold0241 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 3235 - 3197
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  3235 ctaaggtaagggttggactaactttctctaattctaagt 3197  T

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Target: scaffold0230 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 122
Target Start/End: Original strand, 6688 - 6722
Alignment:
Q  88 ggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||    
T  6688 ggtaagggtgggactaactttctctaattctaagt 6722  T

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Target: scaffold0230; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 267
Target Start/End: Original strand, 6910 - 6976
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||| |||| ||| ||||| || |||||||||||||||||||| ||||||| ||||||||||    
T  6910 ttgattgttgaaagtgtatgtaattcaatgaattaacataagaattgatgttcaggttgtagaataa 6976  T

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Target: scaffold0213 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 19260 - 19222
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  19260 ctaacgtaagggtgggactaactttctctaattctaagt 19222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 13391 - 13429
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  13391 ctaaggtaagggtgggactaactttctctaattccaagt 13429  T

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Target: scaffold0149 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 301
Target Start/End: Complemental strand, 21466 - 21376
Alignment:
Q  211 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||||||||   ||||||||  ||| |||||  ||||||| |||||||||| || || || ||||| ||||||||||||||||||    
T  21466 aaagagtaggtaatctgatgaattaaggtaataattggtgttcaggttgtagaataatcatagtttaagttttctatcaaatttgggattt 21376  T

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Target: scaffold0149; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 21664 - 21626
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  21664 ctaaggtaagggtgggactagctttctctaattctaagt 21626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 29572 - 29610
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  29572 ctaaggtaagggtgggactaactttctataattctaagt 29610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 301
Target Start/End: Complemental strand, 8779 - 8677
Alignment:
Q  200 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||||| |||||||||||||||   ||||||||  ||| |||||  ||||||| || ||| ||| || |||| |||||| |||||||||||||||    
T  8779 aattgattgttgaaagagtaggtaatcagatgaattaaggtaataattggtgttcaggttgcagagtaatcataggtagagttttctatcaaatttggga 8680  T
Q  299 ttt 301  Q
    |||    
T  8679 ttt 8677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 122
Target Start/End: Complemental strand, 5432 - 5398
Alignment:
Q  88 ggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||||    
T  5432 ggtaagggtgggactaactttctctaattctaagt 5398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 12534 - 12570
Alignment:
Q  86 aaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||| |||||||||||||||||||||    
T  12534 aaggtaagggtgggaataactttctctaattctaagt 12570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 8990 - 8932
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 297  Q
    |||||||||| ||||||| |||||||||| || | ||| ||||||||||||||||||||    
T  8990 taagaattgatgttcaggttgtagaataatcatatgttaagtttcctatcaaatttggg 8932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 106050 - 106088
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  106050 ctaaggtaagggtgtgactaactttctctaattctaagt 106088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 61847 - 61885
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  61847 ctaaggtaagggtgagactaactttctctaattctaagt 61885  T

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Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 168998 - 169036
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  168998 ctaaggtaggggtgggactaactttctctaattctaagt 169036  T

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Target: scaffold0020; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 143663 - 143626
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  143663 taaggtaagggtgtgactaactttctctaattctaagt 143626  T

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Target: scaffold0737 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 4714 - 4751
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||| |||||||||||||||||||||||||    
T  4714 taaggtaagggtcggactaactttctctaattctaagt 4751  T

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Target: scaffold0407 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 11274 - 11311
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  11274 taaggtaagggtgagactaactttctctaattctaagt 11311  T

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Target: scaffold0153 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 105
Target Start/End: Complemental strand, 5366 - 5329
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaac 105  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  5366 ccgccgatcatcaatactaaggtaagggtgggactaac 5329  T

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Target: scaffold0153; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 105
Target Start/End: Complemental strand, 12386 - 12349
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtgggactaac 105  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  12386 ccgccgatcatcaatactaaggtaagggtgggactaac 12349  T

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Target: scaffold0139 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 115
Target Start/End: Complemental strand, 23597 - 23556
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaat 115  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  23597 atcatcaatactaaggtaagggtaggactagctttctctaat 23556  T

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Target: scaffold0047 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 79101 - 79064
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  79101 taaggtaagggtgagactaactttctctaattctaagt 79064  T

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Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 298
Target Start/End: Original strand, 18976 - 19073
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    ||||||||| |||| |||||||||||| |||| ||| |||| ||| || ||||||| ||||||||||  | ||||   ||||||||||||||||||||    
T  18976 ttgattgttgaaagtgtaggtaatccaatgaactaatataaaaatcgatgttcaggttgtagaataacaataggtgatgtttcctatcaaatttggga 19073  T

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Target: scaffold0156 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 16667 - 16619
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||  |||||||||||||| ||| |||||||||||||    
T  16667 atcatcaatactaagcaaagggtgggactaaatttatctaattctaagt 16619  T

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Target: scaffold0041 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 122
Target Start/End: Original strand, 5712 - 5744
Alignment:
Q  90 taagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||||||||||||||    
T  5712 taagggtgggactaactttctctaattctaagt 5744  T

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Target: scaffold1439 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 975 - 916
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 298  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||| ||| |||||||||||    
T  975 taagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggga 916  T

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Target: scaffold0256 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 83 - 122
Target Start/End: Original strand, 1845 - 1884
Alignment:
Q  83 actaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||  ||||||||||||||||||||||||||||||    
T  1845 actaaggtgtgggtgggactaactttctctaattctaagt 1884  T

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Target: scaffold0671 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 4993 - 4955
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  4993 ctaaggtaagggtgggactaaccttctttaattctaagt 4955  T

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Target: scaffold0285 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 19806 - 19768
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  19806 ctaaggtaagggtgagactgactttctctaattctaagt 19768  T

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Target: scaffold0175 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 8695 - 8657
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||| ||| ||||||||||||    
T  8695 ctaaggtaagggtgggactaaccttcactaattctaagt 8657  T

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Target: scaffold0106 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 21879 - 21821
Alignment:
Q  243 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||| ||||||| |||||||||| || || || || |||||||||||||||||||||    
T  21879 aattgatgttcaggttgtagaataatcatagattaagcttcctatcaaatttgggattt 21821  T

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Target: scaffold0092 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 267
Target Start/End: Original strand, 38558 - 38624
Alignment:
Q  202 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 267  Q
    ||||||||| |||| |||||||||||| ||||||||||| | |||||| ||||||| ||| ||||||    
T  38558 ttgattgttgaaagtgtaggtaatccaatgaattaacatgaaaattgatgttcaggttgtggaataa 38624  T

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Target: scaffold0056 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 67174 - 67136
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||| |||||||||||||||||||||||| ||||    
T  67174 ctaaggtaaaggtgggactaactttctctaattcgaagt 67136  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 174261 - 174323
Alignment:
Q  239 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 301  Q
    |||||||||| | ||||| |||||||||| || | ||| |||||||||||||||||| |||||    
T  174261 taagaattgatggtcaggttgtagaataatcatatgttaagtttcctatcaaatttgagattt 174323  T

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Target: scaffold0010 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 126304 - 126341
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  126304 ctaaggtaagg-tgggactaactttctctaattctaagt 126341  T

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Target: scaffold0008 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 135503 - 135541
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||||||||||||||||| ||| ||||||||||||    
T  135503 ctaaggtaagggtgggactaaccttcactaattctaagt 135541  T

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Target: scaffold0080 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 21793 - 21830
Alignment:
Q  85 taaggtaagggtgggactaactttctctaattctaagt 122  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  21793 taaggtaatggtgggactaaatttctctaattctaagt 21830  T

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Target: scaffold0686 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 100
Target Start/End: Complemental strand, 1507 - 1475
Alignment:
Q  68 ccgccaatcatcaatactaaggtaagggtggga 100  Q
    ||||| |||||||||||||||||||||||||||    
T  1507 ccgccgatcatcaatactaaggtaagggtggga 1475  T

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Target: scaffold0174 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 5520 - 5476
Alignment:
Q  71 ccaatcatcaatactaaggtaagggtgggactaactttctctaat 115  Q
    ||||||||| |  |||||||||||||||||||| |||||||||||    
T  5520 ccaatcatctaatctaaggtaagggtgggactacctttctctaat 5476  T

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Target: scaffold0112 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 116
Target Start/End: Complemental strand, 2942 - 2910
Alignment:
Q  84 ctaaggtaagggtgggactaactttctctaatt 116  Q
    ||||||||||||||||| |||||||||||||||    
T  2942 ctaaggtaagggtgggattaactttctctaatt 2910  T

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Target: scaffold0104 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 15020 - 14972
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||| |||||||||||||  || | |||||||||||    
T  15020 atcatcaatactaaggtgagggtgggactaaacttatataattctaagt 14972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 17040 - 16992
Alignment:
Q  74 atcatcaatactaaggtaagggtgggactaactttctctaattctaagt 122  Q
    ||||||||||||||||| |||||||||||||  || | |||||||||||    
T  17040 atcatcaatactaaggtgagggtgggactaaacttatataattctaagt 16992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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