View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0728_high_18 (Length: 251)
Name: NF0728_high_18
Description: NF0728
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0728_high_18 |
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Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 7381145 - 7380923
Alignment:
| Q |
1 |
ccaagaagcttttttgcatgggaattcccaaaagggtagttgaaagagagacaaagacaagaacttgtaagagaagatggtattgtccttctggtcccat |
100 |
Q |
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| T |
7381145 |
ccaagaagcttttttgcatgggaattcccaaaagggtagttgaaagagagacaaagacaagaacttgtaagagaagatggtattgtccttctggtcccat |
7381046 |
T |
|
| Q |
101 |
gtgatcagctgaatgaagatggaagagaagaagctgttgaa-aaaagccatagaagctaggaattgtgttagggcaagttttgcttggttttcgattttg |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7381045 |
gtgatcagctgaatgaagatggaagagaagaagctgttgaaaaaaagccatagaagctaggaattgtgttagggcaagttttgcttggttttcgattttg |
7380946 |
T |
|
| Q |
200 |
tcaaggattatggaggatgcggc |
222 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
7380945 |
tcaaggattatggaggatgcggc |
7380923 |
T |
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