View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0728_low_19 (Length: 289)
Name: NF0728_low_19
Description: NF0728
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0728_low_19 |
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Alignment Details
Target: chr1 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 38 - 280
Target Start/End: Original strand, 32048633 - 32048875
Alignment:
| Q |
38 |
tattttatatttcatcactctctctatttctctaattataacttggccttcctaaagctatactcgagatctagataaacaagttgtatctatttaattt |
137 |
Q |
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| T |
32048633 |
tattttatatttcatcactctctctatttctctaattataacttggccgtcctaaagctatactcgagatctagataaacaagttgtatctatttaattt |
32048732 |
T |
|
| Q |
138 |
tagccgaaccttcctctaatgaagcttcaatagcttgattctttcctactaagcagtaaataagcactagcaacaactctcccacatataatcaatgtag |
237 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32048733 |
tagccgaaccttcctctaatgaagcttcaatagcttgattctttcctactaagcagtaaataagcactagcaacaactctcccacatataatcaatgtag |
32048832 |
T |
|
| Q |
238 |
cagctgctacaaacaacagtactgacaaggatacgagtataat |
280 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32048833 |
cagctgctacaaacaacagtactgacaaggatacgagtataat |
32048875 |
T |
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