View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0728_low_2 (Length: 448)

Name: NF0728_low_2
Description: NF0728
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0728_low_2
NF0728_low_2
[»] chr4 (100 HSPs)
chr4 (178-418)||(47867806-47868047)
chr4 (178-419)||(2229173-2229415)
chr4 (179-419)||(20281519-20281758)
chr4 (178-419)||(14332685-14332928)
chr4 (178-419)||(26916251-26916493)
chr4 (178-418)||(41414595-41414834)
chr4 (178-352)||(4058709-4058883)
chr4 (186-409)||(56318062-56318287)
chr4 (178-419)||(28668985-28669226)
chr4 (178-352)||(29203500-29203674)
chr4 (178-419)||(7654553-7654785)
chr4 (178-352)||(20716174-20716348)
chr4 (178-352)||(39078151-39078324)
chr4 (180-352)||(55580663-55580836)
chr4 (178-346)||(24940365-24940533)
chr4 (178-352)||(10069691-10069865)
chr4 (186-330)||(16604838-16604982)
chr4 (178-352)||(17794525-17794699)
chr4 (178-352)||(35310726-35310900)
chr4 (178-352)||(5483262-5483436)
chr4 (181-352)||(42915523-42915695)
chr4 (178-352)||(48793614-48793784)
chr4 (178-352)||(1585333-1585505)
chr4 (178-352)||(8683290-8683462)
chr4 (178-352)||(50080440-50080609)
chr4 (186-352)||(52535589-52535743)
chr4 (178-352)||(32323246-32323419)
chr4 (258-352)||(35529666-35529760)
chr4 (217-341)||(5815474-5815598)
chr4 (178-341)||(19351851-19352020)
chr4 (178-342)||(5064639-5064803)
chr4 (186-266)||(16473828-16473908)
chr4 (178-340)||(32203226-32203381)
chr4 (178-352)||(12002617-12002793)
chr4 (178-352)||(14583723-14583897)
chr4 (188-342)||(46070517-46070668)
chr4 (178-288)||(21722666-21722776)
chr4 (178-352)||(25297204-25297380)
chr4 (193-342)||(47516190-47516339)
chr4 (216-351)||(50145731-50145865)
chr4 (220-342)||(5841805-5841927)
chr4 (220-342)||(8178265-8178387)
chr4 (184-337)||(17799124-17799277)
chr4 (220-349)||(17186822-17186940)
chr4 (178-342)||(8013073-8013237)
chr4 (206-352)||(31280193-31280329)
chr4 (180-343)||(30011913-30012074)
chr4 (248-342)||(23978169-23978263)
chr4 (200-302)||(32280009-32280111)
chr4 (178-342)||(32410332-32410496)
chr4 (178-342)||(28142606-28142769)
chr4 (184-341)||(40553774-40553935)
chr4 (220-342)||(37911888-37912010)
chr4 (224-342)||(49080261-49080379)
chr4 (220-281)||(29511490-29511551)
chr4 (220-342)||(28318445-28318565)
chr4 (180-343)||(29180371-29180534)
chr4 (178-342)||(53848471-53848628)
chr4 (372-417)||(17186992-17187037)
chr4 (373-417)||(16605046-16605090)
chr4 (373-417)||(35529568-35529612)
chr4 (180-343)||(30776443-30776606)
chr4 (180-343)||(38940867-38941030)
chr4 (180-343)||(39969948-39970111)
chr4 (373-416)||(42915427-42915470)
chr4 (180-343)||(47807193-47807356)
chr4 (180-343)||(53677438-53677601)
chr4 (374-417)||(55580564-55580607)
chr4 (184-234)||(7438760-7438810)
chr4 (180-282)||(29899774-29899876)
chr4 (218-343)||(10591500-10591625)
chr4 (370-407)||(29203414-29203451)
chr4 (372-417)||(39078054-39078099)
chr4 (194-302)||(25268523-25268631)
chr4 (373-417)||(32012491-32012535)
chr4 (373-417)||(48793837-48793881)
chr4 (219-343)||(50768443-50768567)
chr4 (180-343)||(37788449-37788612)
chr4 (248-343)||(40411104-40411199)
chr4 (372-414)||(4058614-4058656)
chr4 (373-419)||(30012117-30012163)
chr4 (373-419)||(47516383-47516429)
chr4 (372-409)||(10069601-10069638)
chr4 (311-352)||(32280104-32280145)
chr4 (373-409)||(29180576-29180612)
chr4 (185-237)||(31532444-31532496)
chr4 (373-417)||(35310954-35310998)
chr4 (373-417)||(50768357-50768401)
chr4 (178-221)||(4443084-4443126)
chr4 (180-343)||(5222252-5222415)
chr4 (194-302)||(37872657-37872762)
chr4 (372-409)||(4512955-4512992)
chr4 (373-414)||(12002846-12002887)
chr4 (311-352)||(21722783-21722824)
chr4 (384-417)||(52535809-52535842)
chr4 (373-401)||(8683515-8683543)
chr4 (373-409)||(30776648-30776684)
chr4 (373-409)||(30777407-30777443)
chr4 (373-417)||(38940781-38940825)
chr4 (373-417)||(55937867-55937911)
[»] chr5 (91 HSPs)
chr5 (178-419)||(6686311-6686555)
chr5 (178-419)||(43589953-43590195)
chr5 (178-419)||(11261875-11262117)
chr5 (178-419)||(37562752-37562995)
chr5 (190-419)||(37522592-37522823)
chr5 (178-352)||(20644010-20644184)
chr5 (178-352)||(42273645-42273817)
chr5 (181-352)||(34425327-34425497)
chr5 (180-350)||(20039100-20039270)
chr5 (187-352)||(38130113-38130281)
chr5 (206-352)||(32110998-32111144)
chr5 (184-351)||(19413138-19413305)
chr5 (178-352)||(25840860-25841034)
chr5 (202-352)||(8225459-8225608)
chr5 (178-352)||(39505223-39505397)
chr5 (178-352)||(17351384-17351558)
chr5 (226-352)||(38280843-38280969)
chr5 (186-348)||(43454322-43454484)
chr5 (178-352)||(4463356-4463528)
chr5 (186-342)||(12912294-12912449)
chr5 (205-352)||(5984126-5984280)
chr5 (242-352)||(32017700-32017809)
chr5 (178-352)||(9957426-9957581)
chr5 (199-347)||(42104262-42104408)
chr5 (192-352)||(41625517-41625675)
chr5 (178-314)||(12792777-12792903)
chr5 (178-314)||(23233445-23233581)
chr5 (233-351)||(104260-104386)
chr5 (246-342)||(10153987-10154083)
chr5 (178-314)||(12729876-12730001)
chr5 (220-342)||(5369064-5369186)
chr5 (178-342)||(3463808-3463970)
chr5 (178-342)||(5736231-5736395)
chr5 (180-343)||(24439575-24439738)
chr5 (186-342)||(8506443-8506593)
chr5 (244-352)||(7071234-7071342)
chr5 (321-419)||(842698-842799)
chr5 (221-342)||(8959646-8959767)
chr5 (189-258)||(32019911-32019980)
chr5 (194-342)||(16153353-16153500)
chr5 (180-343)||(31690613-31690776)
chr5 (180-302)||(30893243-30893365)
chr5 (210-341)||(8146730-8146860)
chr5 (370-417)||(9957631-9957678)
chr5 (186-341)||(32079512-32079666)
chr5 (310-352)||(12730103-12730145)
chr5 (372-417)||(8225362-8225407)
chr5 (218-343)||(12638892-12639017)
chr5 (372-417)||(42273548-42273593)
chr5 (373-417)||(39505450-39505494)
chr5 (370-417)||(20643913-20643960)
chr5 (220-282)||(1144524-1144586)
chr5 (373-419)||(25840760-25840806)
chr5 (220-341)||(6391876-6391997)
chr5 (186-343)||(8143937-8144094)
chr5 (372-417)||(12730204-12730249)
chr5 (315-352)||(12792929-12792966)
chr5 (218-343)||(13146732-13146857)
chr5 (224-342)||(28907074-28907192)
chr5 (224-342)||(28943469-28943587)
chr5 (221-282)||(29307221-29307282)
chr5 (372-417)||(34425229-34425274)
chr5 (251-342)||(5659584-5659676)
chr5 (224-308)||(30703641-30703725)
chr5 (180-282)||(16286076-16286178)
chr5 (218-343)||(8146044-8146169)
chr5 (372-417)||(12793024-12793069)
chr5 (372-408)||(104437-104473)
chr5 (370-414)||(7071140-7071184)
chr5 (373-417)||(16286281-16286325)
chr5 (186-282)||(18718645-18718741)
chr5 (373-417)||(25962650-25962694)
chr5 (200-344)||(29493525-29493669)
chr5 (373-417)||(35462916-35462960)
chr5 (298-352)||(446000-446054)
chr5 (278-352)||(1238522-1238596)
chr5 (372-417)||(17351279-17351325)
chr5 (318-352)||(23233395-23233429)
chr5 (180-282)||(24432393-24432495)
chr5 (180-282)||(25962441-25962543)
chr5 (180-282)||(31316794-31316896)
chr5 (372-409)||(6391795-6391832)
chr5 (372-409)||(16153543-16153580)
chr5 (372-409)||(20039009-20039046)
chr5 (372-409)||(32017612-32017649)
chr5 (372-417)||(32110901-32110946)
chr5 (315-343)||(17825326-17825354)
chr5 (373-417)||(24439489-24439533)
chr5 (373-409)||(32433580-32433616)
chr5 (373-417)||(38130334-38130378)
chr5 (373-409)||(42364964-42365000)
[»] chr8 (97 HSPs)
chr8 (178-419)||(7022395-7022637)
chr8 (178-419)||(7858454-7858696)
chr8 (178-352)||(34890166-34890340)
chr8 (178-418)||(26483460-26483700)
chr8 (178-352)||(36190766-36190940)
chr8 (178-352)||(43216339-43216513)
chr8 (178-419)||(41086378-41086621)
chr8 (187-352)||(28348605-28348769)
chr8 (178-352)||(34158282-34158457)
chr8 (206-352)||(31734109-31734255)
chr8 (181-352)||(24892832-24893006)
chr8 (179-352)||(8711870-8712039)
chr8 (182-352)||(8107613-8107783)
chr8 (194-352)||(15957919-15958079)
chr8 (178-338)||(30575826-30575987)
chr8 (206-352)||(13143758-13143904)
chr8 (199-352)||(35456038-35456190)
chr8 (178-352)||(29920260-29920434)
chr8 (178-314)||(13143937-13144073)
chr8 (178-352)||(4046885-4047060)
chr8 (178-352)||(8709778-8709950)
chr8 (194-330)||(35525603-35525737)
chr8 (178-352)||(15824629-15824797)
chr8 (178-352)||(7499720-7499883)
chr8 (178-315)||(16358104-16358240)
chr8 (194-352)||(16879400-16879558)
chr8 (255-347)||(3642039-3642130)
chr8 (178-342)||(17713227-17713391)
chr8 (243-352)||(2052830-2052937)
chr8 (181-342)||(41362302-41362463)
chr8 (220-342)||(8673385-8673507)
chr8 (178-340)||(38072169-38072331)
chr8 (178-350)||(44663784-44663953)
chr8 (182-342)||(8745587-8745747)
chr8 (235-342)||(26954441-26954548)
chr8 (180-342)||(2628158-2628320)
chr8 (178-342)||(17336746-17336910)
chr8 (224-342)||(25195085-25195202)
chr8 (180-293)||(8712577-8712690)
chr8 (178-342)||(4038874-4039037)
chr8 (178-352)||(33563499-33563681)
chr8 (231-352)||(41755920-41756041)
chr8 (178-262)||(2052947-2053031)
chr8 (181-301)||(28497133-28497253)
chr8 (178-341)||(5217397-5217559)
chr8 (180-343)||(3099957-3100120)
chr8 (180-343)||(34713532-34713695)
chr8 (370-417)||(34890390-34890437)
chr8 (210-280)||(4480841-4480911)
chr8 (373-417)||(4047113-4047157)
chr8 (246-342)||(27819663-27819759)
chr8 (227-343)||(39187237-39187353)
chr8 (180-343)||(27621134-27621297)
chr8 (180-343)||(31133023-31133186)
chr8 (181-343)||(34899928-34900090)
chr8 (310-352)||(13144085-13144127)
chr8 (180-282)||(40773397-40773499)
chr8 (372-417)||(13143661-13143706)
chr8 (372-417)||(13144179-13144224)
chr8 (247-342)||(14576213-14576301)
chr8 (226-339)||(24510735-24510848)
chr8 (372-417)||(24892735-24892780)
chr8 (372-417)||(35525495-35525540)
chr8 (372-417)||(36190668-36190713)
chr8 (218-343)||(44052625-44052750)
chr8 (273-337)||(7670749-7670813)
chr8 (186-342)||(17314834-17314990)
chr8 (372-416)||(30576045-30576089)
chr8 (373-417)||(36537976-36538020)
chr8 (178-230)||(45190700-45190752)
chr8 (186-232)||(11158675-11158721)
chr8 (186-287)||(6401679-6401780)
chr8 (372-417)||(8673298-8673343)
chr8 (362-419)||(20051504-20051560)
chr8 (218-343)||(25321618-25321743)
chr8 (372-417)||(29920489-29920534)
chr8 (370-417)||(8107834-8107882)
chr8 (373-417)||(11043975-11044019)
chr8 (368-416)||(15958098-15958146)
chr8 (373-417)||(24612679-24612723)
chr8 (372-416)||(38072114-38072158)
chr8 (373-409)||(41809022-41809058)
chr8 (373-416)||(25321785-25321828)
chr8 (180-343)||(27752590-27752753)
chr8 (372-415)||(28348511-28348553)
chr8 (231-281)||(14693434-14693484)
chr8 (186-341)||(27740611-27740763)
chr8 (374-416)||(41362846-41362888)
chr8 (267-328)||(374103-374162)
chr8 (372-417)||(5217308-5217353)
chr8 (377-417)||(2238785-2238825)
chr8 (373-417)||(3099870-3099914)
chr8 (373-409)||(27621056-27621092)
chr8 (246-342)||(29147297-29147393)
chr8 (224-280)||(33851061-33851117)
chr8 (373-409)||(35259983-35260019)
chr8 (373-409)||(37597996-37598032)
[»] chr7 (90 HSPs)
chr7 (178-419)||(14805798-14806039)
chr7 (178-419)||(15252792-15253033)
chr7 (178-419)||(25737617-25737859)
chr7 (178-419)||(19912759-19913001)
chr7 (178-419)||(45485881-45486125)
chr7 (178-416)||(46760247-46760487)
chr7 (178-419)||(18102457-18102700)
chr7 (178-419)||(35923180-35923421)
chr7 (178-352)||(6191041-6191215)
chr7 (186-352)||(25944572-25944738)
chr7 (199-352)||(20123691-20123844)
chr7 (178-352)||(4910625-4910797)
chr7 (178-352)||(47779600-47779774)
chr7 (178-314)||(12632334-12632470)
chr7 (178-352)||(22632085-22632259)
chr7 (178-352)||(44682874-44683047)
chr7 (186-352)||(14574560-14574726)
chr7 (211-352)||(47557622-47557765)
chr7 (186-352)||(15995715-15995882)
chr7 (194-352)||(11780014-11780171)
chr7 (178-352)||(16917468-16917641)
chr7 (206-352)||(2610586-2610732)
chr7 (243-352)||(9158086-9158194)
chr7 (182-342)||(39170540-39170700)
chr7 (311-419)||(12633110-12633219)
chr7 (178-342)||(38260322-38260486)
chr7 (221-327)||(31549936-31550042)
chr7 (212-352)||(35068872-35068999)
chr7 (202-346)||(48413723-48413859)
chr7 (180-341)||(37767011-37767172)
chr7 (178-342)||(35887959-35888123)
chr7 (246-341)||(24151640-24151734)
chr7 (257-351)||(27810804-27810898)
chr7 (220-342)||(31768994-31769116)
chr7 (178-353)||(4237701-4237880)
chr7 (180-341)||(29713196-29713357)
chr7 (178-282)||(10248594-10248700)
chr7 (243-308)||(4069043-4069108)
chr7 (362-419)||(47557922-47557979)
chr7 (186-343)||(48879388-48879545)
chr7 (247-330)||(8015732-8015813)
chr7 (180-343)||(33153039-33153202)
chr7 (319-419)||(16562676-16562778)
chr7 (364-419)||(16602931-16602986)
chr7 (224-343)||(21654116-21654235)
chr7 (370-417)||(25944475-25944522)
chr7 (180-343)||(35084052-35084215)
chr7 (180-343)||(43107856-43108019)
chr7 (185-352)||(19492390-19492559)
chr7 (180-343)||(35181192-35181355)
chr7 (362-416)||(39174181-39174235)
chr7 (186-343)||(40560382-40560539)
chr7 (186-342)||(3777984-3778140)
chr7 (373-417)||(18800919-18800963)
chr7 (373-417)||(47778671-47778715)
chr7 (180-343)||(18206270-18206433)
chr7 (180-343)||(44600446-44600609)
chr7 (373-419)||(4910850-4910896)
chr7 (218-343)||(41815682-41815807)
chr7 (218-343)||(48937878-48938003)
chr7 (373-417)||(3157350-3157394)
chr7 (304-351)||(4068972-4069020)
chr7 (261-341)||(22369233-22369313)
chr7 (372-416)||(24151776-24151820)
chr7 (373-417)||(30082278-30082322)
chr7 (373-417)||(36576332-36576376)
chr7 (373-417)||(44600360-44600404)
chr7 (373-416)||(9157990-9158033)
chr7 (224-343)||(19933050-19933169)
chr7 (224-343)||(19964189-19964308)
chr7 (219-341)||(33092669-33092792)
chr7 (319-353)||(16602884-16602918)
chr7 (372-418)||(35069051-35069097)
chr7 (218-343)||(3157436-3157561)
chr7 (372-409)||(20123896-20123933)
chr7 (218-343)||(29236057-29236181)
chr7 (258-343)||(30082353-30082438)
chr7 (373-414)||(39337444-39337485)
chr7 (290-343)||(41890303-41890356)
chr7 (372-409)||(44682779-44682816)
chr7 (373-417)||(9818395-9818439)
chr7 (218-282)||(9818529-9818593)
chr7 (373-417)||(10720320-10720364)
chr7 (218-282)||(10720454-10720518)
chr7 (373-417)||(19933211-19933255)
chr7 (373-417)||(19964350-19964394)
chr7 (373-417)||(22631986-22632030)
chr7 (373-409)||(39348711-39348747)
chr7 (373-417)||(41815849-41815893)
chr7 (373-409)||(43108062-43108098)
[»] chr6 (31 HSPs)
chr6 (178-419)||(21542346-21542588)
chr6 (178-419)||(35129045-35129288)
chr6 (178-419)||(3095711-3095954)
chr6 (178-419)||(34177632-34177874)
chr6 (186-418)||(11082244-11082477)
chr6 (178-352)||(7274866-7275040)
chr6 (178-352)||(30794183-30794357)
chr6 (178-352)||(12461420-12461594)
chr6 (178-352)||(17751735-17751909)
chr6 (218-352)||(31107187-31107320)
chr6 (178-342)||(4031991-4032158)
chr6 (178-342)||(4987947-4988115)
chr6 (220-342)||(16524384-16524505)
chr6 (178-352)||(14573119-14573293)
chr6 (274-352)||(9428766-9428844)
chr6 (220-338)||(16013465-16013583)
chr6 (187-343)||(17598294-17598450)
chr6 (220-342)||(3888431-3888553)
chr6 (180-276)||(5822027-5822123)
chr6 (178-236)||(9428857-9428915)
chr6 (180-307)||(5881746-5881872)
chr6 (178-281)||(15830760-15830863)
chr6 (246-288)||(5300659-5300701)
chr6 (219-343)||(21963958-21964082)
chr6 (223-341)||(16870828-16870947)
chr6 (373-416)||(30949051-30949094)
chr6 (375-417)||(32882882-32882924)
chr6 (372-417)||(1130435-1130480)
chr6 (373-409)||(10227835-10227871)
chr6 (377-409)||(17598216-17598248)
chr6 (373-409)||(17722007-17722043)
[»] chr1 (120 HSPs)
chr1 (178-419)||(39555577-39555819)
chr1 (178-419)||(32623996-32624239)
chr1 (188-419)||(12448969-12449200)
chr1 (178-419)||(24190399-24190639)
chr1 (178-419)||(2125965-2126208)
chr1 (178-419)||(43667294-43667533)
chr1 (178-352)||(15959631-15959805)
chr1 (178-418)||(35691320-35691562)
chr1 (178-352)||(6786834-6787008)
chr1 (186-418)||(42965815-42966045)
chr1 (181-352)||(6785452-6785622)
chr1 (178-352)||(33369549-33369720)
chr1 (178-406)||(32983163-32983390)
chr1 (178-352)||(40718674-40718848)
chr1 (178-352)||(45226134-45226308)
chr1 (178-352)||(28016737-28016909)
chr1 (180-402)||(28120748-28120970)
chr1 (178-344)||(13136545-13136708)
chr1 (178-352)||(3076291-3076465)
chr1 (186-352)||(7467961-7468128)
chr1 (178-352)||(3875010-3875186)
chr1 (178-302)||(11241073-11241197)
chr1 (186-352)||(1820411-1820577)
chr1 (178-352)||(46542980-46543152)
chr1 (181-352)||(47600030-47600204)
chr1 (191-352)||(39932576-39932737)
chr1 (181-352)||(47014487-47014655)
chr1 (178-352)||(24728617-24728792)
chr1 (177-352)||(46818492-46818667)
chr1 (178-352)||(44148827-44148997)
chr1 (178-352)||(33431557-33431729)
chr1 (199-352)||(2246026-2246179)
chr1 (199-352)||(37735395-37735548)
chr1 (191-352)||(3861699-3861858)
chr1 (178-302)||(52984979-52985103)
chr1 (178-352)||(1034854-1035025)
chr1 (178-336)||(7875931-7876091)
chr1 (178-327)||(32742193-32742342)
chr1 (227-351)||(10558796-10558920)
chr1 (238-349)||(16854139-16854250)
chr1 (178-352)||(50369954-50370120)
chr1 (232-352)||(23392211-23392330)
chr1 (205-352)||(43765290-43765438)
chr1 (182-352)||(47302903-47303071)
chr1 (247-352)||(6787050-6787154)
chr1 (205-352)||(25391680-25391824)
chr1 (220-342)||(5858404-5858526)
chr1 (188-302)||(30221771-30221885)
chr1 (178-342)||(7397712-7397876)
chr1 (178-342)||(16688142-16688306)
chr1 (178-342)||(37538815-37538979)
chr1 (178-342)||(45840057-45840220)
chr1 (178-330)||(298659-298812)
chr1 (220-342)||(5950445-5950567)
chr1 (178-314)||(32318551-32318687)
chr1 (178-352)||(50012587-50012749)
chr1 (180-341)||(52841438-52841599)
chr1 (178-282)||(50176588-50176692)
chr1 (181-255)||(4672924-4672998)
chr1 (219-342)||(8889729-8889845)
chr1 (186-342)||(25185302-25185459)
chr1 (178-326)||(30701376-30701524)
chr1 (186-342)||(35366202-35366358)
chr1 (220-342)||(44510252-44510374)
chr1 (178-342)||(41063747-41063912)
chr1 (268-334)||(14086966-14087030)
chr1 (180-343)||(36383929-36384092)
chr1 (178-343)||(25990749-25990914)
chr1 (260-340)||(47026655-47026736)
chr1 (246-342)||(15912204-15912300)
chr1 (180-344)||(28916511-28916675)
chr1 (243-342)||(13351686-13351785)
chr1 (180-343)||(23873823-23873986)
chr1 (372-417)||(6786736-6786781)
chr1 (372-417)||(7468170-7468215)
chr1 (372-417)||(28016961-28017006)
chr1 (373-417)||(44149050-44149094)
chr1 (296-352)||(50665259-50665315)
chr1 (370-417)||(15959855-15959902)
chr1 (263-342)||(34102049-34102127)
chr1 (180-343)||(38942437-38942600)
chr1 (180-343)||(46949322-46949485)
chr1 (372-417)||(6787208-6787253)
chr1 (224-342)||(16661521-16661639)
chr1 (218-343)||(40220057-40220182)
chr1 (180-341)||(42724101-42724262)
chr1 (180-343)||(35884212-35884375)
chr1 (180-343)||(35941842-35942005)
chr1 (180-343)||(43656033-43656196)
chr1 (314-352)||(11241039-11241077)
chr1 (186-276)||(46803670-46803760)
chr1 (228-302)||(51338938-51339012)
chr1 (228-302)||(51840536-51840610)
chr1 (372-417)||(4672798-4672843)
chr1 (372-417)||(6785355-6785400)
chr1 (269-342)||(39151242-39151315)
chr1 (180-343)||(26907087-26907248)
chr1 (373-417)||(29488663-29488707)
chr1 (298-342)||(43359696-43359740)
chr1 (180-343)||(40935609-40935772)
chr1 (375-417)||(46542880-46542923)
chr1 (372-417)||(298884-298929)
chr1 (372-417)||(1820314-1820359)
chr1 (372-417)||(7397625-7397670)
chr1 (372-417)||(33369452-33369497)
chr1 (372-417)||(47026393-47026438)
chr1 (372-408)||(3875240-3875276)
chr1 (373-409)||(9127966-9128002)
chr1 (372-416)||(11240945-11240989)
chr1 (373-417)||(26907290-26907334)
chr1 (373-409)||(28916716-28916752)
chr1 (373-409)||(35189123-35189159)
chr1 (373-417)||(38942642-38942686)
chr1 (373-409)||(39026447-39026483)
chr1 (373-417)||(40935814-40935858)
chr1 (373-417)||(40960675-40960719)
chr1 (263-343)||(44056377-44056457)
chr1 (373-409)||(44875102-44875138)
chr1 (373-409)||(46949244-46949280)
chr1 (373-417)||(49924334-49924378)
[»] chr2 (73 HSPs)
chr2 (178-419)||(6110189-6110433)
chr2 (186-419)||(28599146-28599381)
chr2 (178-419)||(35517050-35517293)
chr2 (178-416)||(45085188-45085427)
chr2 (178-419)||(41528184-41528427)
chr2 (178-419)||(3201263-3201496)
chr2 (178-352)||(19264095-19264270)
chr2 (178-352)||(45660361-45660538)
chr2 (178-352)||(11617020-11617194)
chr2 (181-352)||(33198624-33198795)
chr2 (178-352)||(6765923-6766098)
chr2 (177-352)||(12938238-12938413)
chr2 (178-352)||(28858305-28858482)
chr2 (178-352)||(25572042-25572215)
chr2 (178-352)||(29524031-29524205)
chr2 (178-352)||(24204519-24204693)
chr2 (178-352)||(9864708-9864881)
chr2 (186-349)||(8701601-8701764)
chr2 (206-352)||(14873958-14874105)
chr2 (178-352)||(7645217-7645394)
chr2 (186-352)||(5963197-5963362)
chr2 (226-352)||(40584436-40584562)
chr2 (180-348)||(35022897-35023066)
chr2 (182-352)||(30830590-30830760)
chr2 (186-352)||(33677479-33677645)
chr2 (178-327)||(35115793-35115943)
chr2 (178-352)||(44454987-44455159)
chr2 (178-324)||(40808710-40808853)
chr2 (178-342)||(26998323-26998487)
chr2 (178-281)||(43415468-43415571)
chr2 (180-342)||(32010108-32010270)
chr2 (181-350)||(4707419-4707585)
chr2 (220-342)||(32273677-32273799)
chr2 (243-352)||(30421237-30421346)
chr2 (186-342)||(38071002-38071157)
chr2 (220-335)||(9709526-9709641)
chr2 (177-342)||(4891627-4891793)
chr2 (266-352)||(39696877-39696963)
chr2 (273-323)||(5280592-5280642)
chr2 (220-342)||(20380129-20380251)
chr2 (246-342)||(8032726-8032823)
chr2 (180-343)||(18833902-18834065)
chr2 (370-417)||(19263998-19264045)
chr2 (178-302)||(32428019-32428144)
chr2 (220-342)||(11030962-11031077)
chr2 (178-271)||(11825349-11825438)
chr2 (180-343)||(792348-792511)
chr2 (194-252)||(5280536-5280595)
chr2 (183-343)||(9294656-9294816)
chr2 (236-281)||(16494974-16495019)
chr2 (372-417)||(33198851-33198896)
chr2 (180-342)||(33932915-33933073)
chr2 (372-417)||(38070914-38070959)
chr2 (249-342)||(44442137-44442230)
chr2 (372-417)||(45660261-45660306)
chr2 (372-416)||(5280697-5280741)
chr2 (373-417)||(25571943-25571987)
chr2 (373-417)||(29524258-29524302)
chr2 (180-343)||(14565365-14565528)
chr2 (180-343)||(21539758-21539921)
chr2 (373-416)||(40808930-40808973)
chr2 (180-343)||(44803899-44804062)
chr2 (373-419)||(18834109-18834155)
chr2 (372-417)||(28858208-28858253)
chr2 (373-417)||(21539672-21539716)
chr2 (373-417)||(33635251-33635295)
chr2 (372-417)||(26998235-26998280)
chr2 (178-343)||(28492521-28492686)
chr2 (373-409)||(792553-792589)
chr2 (373-409)||(14565571-14565607)
chr2 (373-417)||(18454964-18455008)
chr2 (373-409)||(29514216-29514252)
chr2 (373-417)||(38549840-38549884)
[»] scaffold0300 (1 HSPs)
scaffold0300 (179-419)||(565-806)
[»] chr3 (120 HSPs)
chr3 (178-417)||(37042367-37042607)
chr3 (186-419)||(11054269-11054500)
chr3 (186-419)||(23311551-23311785)
chr3 (180-419)||(36546474-36546714)
chr3 (180-419)||(36561601-36561841)
chr3 (178-419)||(30189501-30189745)
chr3 (178-352)||(14752158-14752332)
chr3 (178-352)||(28875406-28875580)
chr3 (178-416)||(47864125-47864365)
chr3 (178-352)||(50650987-50651161)
chr3 (178-352)||(35963152-35963326)
chr3 (178-352)||(6075081-6075255)
chr3 (178-352)||(7866433-7866607)
chr3 (178-352)||(46711608-46711781)
chr3 (178-348)||(579095-579258)
chr3 (206-352)||(6438083-6438229)
chr3 (178-352)||(54464846-54465019)
chr3 (186-352)||(37074958-37075126)
chr3 (178-352)||(53270233-53270408)
chr3 (178-352)||(50730109-50730283)
chr3 (178-352)||(50782571-50782745)
chr3 (178-352)||(2927289-2927464)
chr3 (178-419)||(23910463-23910687)
chr3 (178-352)||(26208014-26208188)
chr3 (178-352)||(29235193-29235361)
chr3 (178-352)||(8703109-8703279)
chr3 (178-352)||(9054996-9055166)
chr3 (181-352)||(19464075-19464248)
chr3 (194-351)||(20847235-20847391)
chr3 (178-352)||(41476285-41476453)
chr3 (186-352)||(32619787-32619954)
chr3 (186-352)||(26724949-26725115)
chr3 (177-305)||(31836966-31837094)
chr3 (178-293)||(9264610-9264725)
chr3 (178-352)||(47115849-47116023)
chr3 (246-347)||(34722623-34722724)
chr3 (224-352)||(3972275-3972402)
chr3 (224-352)||(3997476-3997603)
chr3 (178-342)||(8096968-8097132)
chr3 (186-342)||(22479012-22479168)
chr3 (178-342)||(34194892-34195056)
chr3 (222-352)||(6752670-6752800)
chr3 (178-342)||(10114915-10115079)
chr3 (190-342)||(30454687-30454838)
chr3 (264-352)||(46557237-46557325)
chr3 (222-335)||(16032981-16033094)
chr3 (178-342)||(10252015-10252179)
chr3 (178-342)||(21214245-21214412)
chr3 (178-342)||(22455958-22456122)
chr3 (256-352)||(47866941-47867036)
chr3 (219-342)||(38401384-38401507)
chr3 (283-352)||(33974614-33974683)
chr3 (181-342)||(47443927-47444087)
chr3 (186-342)||(7886575-7886731)
chr3 (178-342)||(10014273-10014437)
chr3 (220-342)||(46918205-46918327)
chr3 (178-302)||(8769529-8769651)
chr3 (180-288)||(33973518-33973627)
chr3 (263-352)||(38674870-38674959)
chr3 (296-352)||(48802548-48802604)
chr3 (177-277)||(25242127-25242227)
chr3 (178-277)||(46557120-46557219)
chr3 (180-343)||(51309415-51309578)
chr3 (178-342)||(2994365-2994532)
chr3 (189-304)||(3084141-3084256)
chr3 (370-417)||(14752382-14752429)
chr3 (180-343)||(31126214-31126377)
chr3 (178-295)||(8764629-8764744)
chr3 (184-272)||(17587779-17587867)
chr3 (246-342)||(48291826-48291922)
chr3 (224-343)||(1335112-1335231)
chr3 (289-352)||(9264008-9264071)
chr3 (180-343)||(55400740-55400903)
chr3 (225-352)||(41936195-41936313)
chr3 (246-288)||(54725628-54725670)
chr3 (372-417)||(6074985-6075030)
chr3 (372-417)||(7866659-7866704)
chr3 (372-417)||(22479211-22479256)
chr3 (180-293)||(31292664-31292777)
chr3 (372-417)||(37074861-37074906)
chr3 (258-343)||(51426621-51426706)
chr3 (220-280)||(6784390-6784450)
chr3 (180-343)||(21654247-21654410)
chr3 (370-417)||(28875309-28875356)
chr3 (312-347)||(34722564-34722599)
chr3 (375-417)||(33974738-33974780)
chr3 (184-341)||(23209236-23209393)
chr3 (373-417)||(2927191-2927235)
chr3 (201-244)||(2878210-2878253)
chr3 (311-350)||(8769644-8769683)
chr3 (373-416)||(16739315-16739358)
chr3 (247-302)||(30612221-30612276)
chr3 (210-324)||(36150946-36151061)
chr3 (178-225)||(47866874-47866921)
chr3 (370-417)||(54465065-54465112)
chr3 (372-417)||(6437982-6438028)
chr3 (371-417)||(26725167-26725213)
chr3 (180-282)||(32322194-32322296)
chr3 (180-282)||(34022662-34022764)
chr3 (310-352)||(36509540-36509582)
chr3 (258-304)||(45868536-45868582)
chr3 (372-417)||(2994575-2994620)
chr3 (313-350)||(8764746-8764783)
chr3 (372-409)||(8764837-8764874)
chr3 (373-406)||(19463988-19464021)
chr3 (372-417)||(21214157-21214202)
chr3 (372-417)||(22456165-22456210)
chr3 (372-409)||(31836863-31836900)
chr3 (372-417)||(38401296-38401341)
chr3 (372-417)||(46711835-46711880)
chr3 (372-417)||(50651213-50651258)
chr3 (373-409)||(3972177-3972213)
chr3 (373-409)||(3997665-3997701)
chr3 (372-416)||(6752571-6752615)
chr3 (373-409)||(21654168-21654204)
chr3 (373-409)||(28793085-28793121)
chr3 (373-417)||(45347828-45347872)
chr3 (373-417)||(45781313-45781357)
chr3 (218-282)||(45781460-45781524)
chr3 (372-408)||(49583890-49583926)
[»] scaffold0045 (1 HSPs)
scaffold0045 (178-419)||(77885-78127)
[»] scaffold0442 (1 HSPs)
scaffold0442 (186-409)||(9983-10207)
[»] scaffold0774 (1 HSPs)
scaffold0774 (206-409)||(3447-3651)
[»] scaffold0062 (1 HSPs)
scaffold0062 (178-352)||(44762-44936)
[»] scaffold0018 (1 HSPs)
scaffold0018 (184-416)||(154792-155024)
[»] scaffold0009 (3 HSPs)
scaffold0009 (186-352)||(157790-157956)
scaffold0009 (178-352)||(52593-52767)
scaffold0009 (373-416)||(157694-157737)
[»] scaffold0132 (4 HSPs)
scaffold0132 (178-352)||(1008-1182)
scaffold0132 (178-352)||(8968-9142)
scaffold0132 (372-417)||(911-956)
scaffold0132 (372-417)||(8871-8916)
[»] scaffold0111 (1 HSPs)
scaffold0111 (205-352)||(40175-40321)
[»] scaffold0012 (1 HSPs)
scaffold0012 (222-352)||(160246-160376)
[»] scaffold0565 (1 HSPs)
scaffold0565 (178-342)||(5866-6030)
[»] scaffold0005 (1 HSPs)
scaffold0005 (178-352)||(233478-233652)
[»] scaffold0010 (1 HSPs)
scaffold0010 (178-321)||(160910-161053)
[»] scaffold0330 (1 HSPs)
scaffold0330 (178-342)||(3174-3338)
[»] scaffold1786 (1 HSPs)
scaffold1786 (189-302)||(893-997)
[»] scaffold1157 (1 HSPs)
scaffold1157 (210-292)||(1690-1772)
[»] scaffold0495 (1 HSPs)
scaffold0495 (373-409)||(4554-4590)


Alignment Details
Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 100)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 178 - 418
Target Start/End: Complemental strand, 47868047 - 47867806
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47868047 aatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 47867948  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac-nnnnnnnntcttggaaaagataa 376  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||| |||||||||    
T  47867947 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaatcttgaaaaagataa 47867848  T
Q  377 aagtttgtcttttttgcttatattttgggacaacgaaaatgt 418  Q
    |||||| |||||||||||||||||||||||||| ||||||||    
T  47867847 aagtttttcttttttgcttatattttgggacaaagaaaatgt 47867806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 178 - 419
Target Start/End: Complemental strand, 2229415 - 2229173
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  2229415 aatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttt 2229316  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac-nnnnnnnntcttggaaaagataa 376  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||         | |||||||||||||    
T  2229315 attggctattggttatggaaaaaatgaaagaaaaagaaaattgaatgtaatttgcatttaatattatgagaataacaaaaaaaaatattggaaaagataa 2229216  T
Q  377 aagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  2229215 aagtttgtcttttttgcttatattttgggacaaagaaaatgtg 2229173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 179 - 419
Target Start/End: Complemental strand, 20281758 - 20281519
Alignment:
Q  179 atcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttca 278  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20281758 atcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttca 20281659  T
Q  279 ttggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaat-aacnnnnnnnntcttggaaaagataaa 377  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||        ||||||||||||||||    
T  20281658 ttggctattggttatggaaaaaatgaaagaaaaagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcttggaaaagataaa 20281559  T
Q  378 agtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    ||  ||||||||||||||||||||||| |||| |||||||||    
T  20281558 ag--tgtcttttttgcttatattttggaacaaagaaaatgtg 20281519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 178 - 419
Target Start/End: Complemental strand, 14332928 - 14332685
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  14332928 aatcacacttattaagaaaactaaaacataagaatttggaatatggttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttt 14332829  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa--cnnnnnnnntcttggaaaagata 375  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||    
T  14332828 attggccattggttatgaaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaaatcttggaaaagata 14332729  T
Q  376 aaagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  14332728 aaagtttgtcttttttgcttatattttgggacaaagaaaatgtg 14332685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 178 - 419
Target Start/End: Complemental strand, 26916493 - 26916251
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||     
T  26916493 aatcacacttattaagaaaactaaaacataagaatttggagtatggttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttt 26916394  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaat-aacnnnnnnnntcttggaaaagataa 376  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||        ||||| ||| |||||    
T  26916393 attggctattggttatggaaaaaatgaaagaaaaataaaattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcttgaaaaggataa 26916294  T
Q  377 aagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    |||||| |||||||||||||||||||| ||||| |||||||||    
T  26916293 aagtttatcttttttgcttatattttgagacaaagaaaatgtg 26916251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 178 - 418
Target Start/End: Original strand, 41414595 - 41414834
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||     
T  41414595 aatcacacttattaagaaaactaaaacataagaatatggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttt 41414694  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataacnnnnnnnntcttggaaaagataaa 377  Q
    ||||||||||| |||| |||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||         ||||| ||||||||||    
T  41414695 attggctattgattat-gaaaaaatgaaagagagaaaaaattgaatgtaatttgcatttaattttataagaataaacaaaaaaatcttgaaaaagataaa 41414793  T
Q  378 agtttgtcttttttgcttatattttgggacaacgaaaatgt 418  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  41414794 agtttgtcttttttacttatattttgggacaaagaaaatgt 41414834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 4058883 - 4058709
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4058883 aatcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttc 4058784  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  4058783 attggttattggttatggaaaaaatgaaagagagagaaaattgaatgaaatttgcatttaattttatgagaataa 4058709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 186 - 409
Target Start/End: Original strand, 56318062 - 56318287
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    ||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  56318062 ttattaaaaaaattaaaacataagaatttagagtatggttttttgtgttttctttggaaaaaggtttataggaagatgtaaaaacaattttcattagcta 56318161  T
Q  286 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa--cnnnnnnnntcttggaaaagataaaagtttg 383  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||           | ||||||||||||||||| ||    
T  56318162 ttggttatggaaaaaatgaaagagagagaaaattgaatgtaatttacatttaattttatgataataaacaaaaaaaaatattggaaaagataaaagtatg 56318261  T
Q  384 tcttttttgcttatattttgggacaa 409  Q
    ||||||||||||||||||||||||||    
T  56318262 tcttttttgcttatattttgggacaa 56318287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 178 - 419
Target Start/End: Original strand, 28668985 - 28669226
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| ||||||||||||||||  |||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||    
T  28668985 aatcacacttattaagaaaactaaaacataagaatttaaagtatagttttttgtgttttctttagaaaaggttttataggaaaatgtaaaaacaattttc 28669084  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaat-aacnnnnnnnntcttggaaaagataa 376  Q
    ||||| |||| ||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||        ||||| |||||||||    
T  28669085 attggttattagttat-gaaaaaatgaaagagagagaaaattgaatgtaatttgtatttaattttatgagaataaacaaaaaaaatcttgaaaaagataa 28669183  T
Q  377 aagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    || |||||| ||||||||||||||||||||||| |||||||||    
T  28669184 aaatttgtcctttttgcttatattttgggacaaagaaaatgtg 28669226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 29203674 - 29203500
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||   |||||||||||||||||||||||||||||    
T  29203674 aatcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttgcaaatttttttataggaagatgtaaaaacaattttc 29203575  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  29203574 attggctattggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataa 29203500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 178 - 419
Target Start/End: Complemental strand, 7654785 - 7654553
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7654785 aatcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatataaaaacaattttc 7654686  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac--nnnnnnnntcttggaaaagata 375  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||           ||||||||||||||||          ||||||||||||||    
T  7654685 attggctattgattatggaaaaaatgaaagaaagagaaaattgaatgta-----------attttatgagaataacaaaaaaaaaatcttggaaaagata 7654597  T
Q  376 aaagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    ||||||||||||||||||||||||||| ||| || |||||||||    
T  7654596 aaagtttgtcttttttgcttatattttaggataaagaaaatgtg 7654553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 20716348 - 20716174
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||| |||||  |||| ||||||||||||||||||| ||||||||||||||||||||    
T  20716348 aatcacacttattaagaaaactaaaacataagaatttggagtatagtcttttgacttttgtttggaaaaagttttatagaaagatgtaaaaacaattttc 20716249  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  20716248 attggctattggttatggaaaaaatgaaagagtgagaaaattgaatgtaatttgcatttaattttatgagaataa 20716174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 39078324 - 39078151
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39078324 aatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatag-aagatgtaaaaacaattttc 39078226  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||||| ||||| |||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||    
T  39078225 attggctattagttattgaaaaaatgaaagagaaagaaaattgaatgtaatgtgcatttaattttatgagaataa 39078151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 180 - 352
Target Start/End: Complemental strand, 55580836 - 55580663
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  55580836 tcacatttattaagaaaactgaaacataagaatttggagtatagttttttttgttttctttggaaaaagttgtataggaagatgtaaaaacaattttcat 55580737  T
Q  280 tggctattggttatggaa-aaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||| ||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  55580736 tggctattagttatggaaaaaaatgaaagaaagagaaattttaatgtaatttgcatttaattttatgagaataa 55580663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 178 - 346
Target Start/End: Complemental strand, 24940533 - 24940365
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  24940533 aatcacatttattaagaaaactaaaacgtaagaatttggagtatagttttttgtattttctttggaaaaagttttataagaagatgtaaaaacaattttc 24940434  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatga 346  Q
     |||| ||||||||||||| ||||||||||| |||||||||| |||||||||| |||||||||||||||    
T  24940433 gttggttattggttatggagaaaatgaaagagagagaaaattaaatgtaatttccatttaattttatga 24940365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 10069865 - 10069691
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||||| |||| ||||||||||||||||| ||||||||||||||| ||||||| | |||||||||||||| ||||||||||||||||||||    
T  10069865 aatcacacttattaataaaactaaaacataagaatttgtagtatagttttttgtattttcttcgaaaaaagttttatagaaagatgtaaaaacaattttc 10069766  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  10069765 attggctattggttatggaaaaagtgaaagaaaaggaaaattgaatgttatttgcatttaattttatgagaataa 10069691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 186 - 330
Target Start/End: Original strand, 16604838 - 16604982
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  16604838 ttattaagaaaactaaaacataagaatttagagtatagttttttgtgttttctttgaaaaaagttttataggaagatgttaaaacaattttcattggcta 16604937  T
Q  286 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaattt 330  Q
    || |||||||||||||||||||| |||||||||||||||||||||    
T  16604938 ttagttatggaaaaaatgaaagagagagaaaattgaatgtaattt 16604982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 17794525 - 17794699
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| ||||| | ||||||||| |||||||||||||| |||||||||| || || |||||||||||||||||||||||||||||    
T  17794525 aatcacacttattaagaaaactaaaaaaaaagaatttgaagtatagttttttgcgttttctttgaaataaattttataggaagatgtaaaaacaattttc 17794624  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||| ||||||||||| || |||| ||||||||||||||||||||| |||||||||||||||||||||    
T  17794625 attggctattgattatggaaaaattggaagagagagaaaattgaatgtaatttacatttaattttatgagaataa 17794699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 35310726 - 35310900
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||| |||||||||||||| ||||||||||||||||| || ||||||||||||||||||||| ||| |||||| || | ||||||||||||||||||||    
T  35310726 aatcatatttattaagaaaactaaaacataagaatttgtagcatagttttttgtgttttctttagaataagtttcatggaaagatgtaaaaacaattttc 35310825  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||||||||||||||||||||| |||| |||||||||| ||||||||||| ||||||||| ||||||||||    
T  35310826 attggctattggttatggaaaaaatggaagagagagaaaattaaatgtaatttgtatttaatttcatgagaataa 35310900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 5483262 - 5483436
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| || ||||||||| |||||||||| |||||| |||||| |||||||||||||||||  || |||||| |||||||||||||||||||||||||    
T  5483262 aatcacacttgttaagaaaactaaaacataaaaatttgaagtataattttttgtgttttctttaaaataagtttaataggaagatgtaaaaacaattttc 5483361  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||| |||||||||| |||||| |||| ||||||||||||||||||| |||||||||||| ||||||||||    
T  5483362 attggctactggttatggagaaaatggaagagagagaaaattgaatgtaatatgcatttaatttcatgagaataa 5483436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 181 - 352
Target Start/End: Complemental strand, 42915695 - 42915523
Alignment:
Q  181 cacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 280  Q
    |||| ||||||| |||| ||||| ||||||||||| || ||||||||||||||||||||||||| |||||| || | |||||||||||||||||||||||    
T  42915695 cacacttattaaaaaaactaaaatataagaatttgtagcatagttttttgtgttttctttggaataagtttcatggaaagatgtaaaaacaattttcatt 42915596  T
Q  281 ggctattggttatggaa-aaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||| ||||||||||||| ||||| ||||| |||||||||| ||||||||||||||||||||| ||||||||||    
T  42915595 ggcaattggttatggaaaaaaataaaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataa 42915523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 48793614 - 48793784
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||| |||||||||||| || ||||||||  ||||||||||||||| |||||| || ||||||||||||||||||||||    
T  48793614 aatcacacttattaagaaaactaaagcataagaatttgtagcatagtttt--gtgttttctttggaataagtttcatgggaagatgtaaaaacaattttc 48793711  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||| |||||||||| ||||||| ||||  |||||||||| ||||||||||||||||||||| ||||||||||    
T  48793712 attggcaattggttatgaaaaaaataaaag--agagaaaattaaatgtaatttgcatttaatttcatgagaataa 48793784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 1585333 - 1585505
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| || ||||||||| |||||||||||| ||||||||||| ||||  |||||||||||| || |||||| || | ||||||| |||||||||||     
T  1585333 aatcacacttgttaagaaaagtaaaacataagattttggagtataatttt--gtgttttctttgaaataagtttcatggaaagatgttaaaacaattttt 1585430  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||| ||||||| |||||| |||| ||||||||||||||||||||| |||||||||||||||||||||    
T  1585431 attggctattgattatggagaaaatggaagagagagaaaattgaatgtaattttcatttaattttatgagaataa 1585505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 8683290 - 8683462
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||||| |||| |||| |||||||||||| || ||||||||||||||||||||||||| |||||| || | || ||||||||| |||||||    
T  8683290 aatcacacttattaaaaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagtttcatggaaatatgtaaaaataattttc 8683389  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||| |||||||||||||||||| ||||  |||||||||| ||||||||||| ||||||||| ||||||||||    
T  8683390 attggcaattggttatggaaaaaataaaag--agagaaaattaaatgtaatttgtatttaatttcatgagaataa 8683462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 50080440 - 50080609
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||||||||| ||||||| ||||||||||||||||| | | ||     || |||| || ||||| |||||||     
T  50080440 aatcacacttattaagaaaactaaaacataagaattttgagtataattttttgtgttttcttttgtataa-----atgggaaaatataaaaccaattttt 50080534  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||| ||||||| |||||| |||| || ||||||||||||||||||||||||||||| ||| ||||||    
T  50080535 attggctattgattatggataaaatggaagagagtgaaaattgaatgtaatttgcatttaatttcatgcgaataa 50080609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 186 - 352
Target Start/End: Original strand, 52535589 - 52535743
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    |||||||||||| |||| ||||||||||||||||||||||||         |||| |||||| |||||||  |||   |||||| |||||||||||||||    
T  52535589 ttattaagaaaactaaagcataagaatttggagtatagtttt---------ctttagaaaaatttttatataaag---taaaaataattttcattggcta 52535676  T
Q  286 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||| |||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  52535677 ttggttatagaaaaagtgaaagagagagaaaattgaatataatttgcatttaattttatgagaataa 52535743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 32323246 - 32323419
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||| |||| |||||||||||||||  ||| |||||| ||||| ||||||||||||||||||  || ||| ||||| ||||||||||||||||||||||    
T  32323246 aatcaaatttgttaagaaaattaaaatttaaaaatttgaagtattgttttttgtgttttctttaaaataagatttatgggaagatgtaaaaacaattttc 32323345  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||| |  ||| |||| || |||||| |||| ||||||||||||| ||||||| |||||||||| |||| |||||    
T  32323346 attgacgcttgattattgagaaaatggaagagagagaaaattgaa-gtaatttacatttaatttcatgataataa 32323419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 258 - 352
Target Start/End: Complemental strand, 35529760 - 35529666
Alignment:
Q  258 aagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||| ||||    
T  35529760 aagatgtaaaaacaattttcattgggtattggttatggaaaaaatgaaagagagataaaattgaaagtaatttgcatttaattttatgagcataa 35529666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 217 - 341
Target Start/End: Complemental strand, 5815598 - 5815474
Alignment:
Q  217 agtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaa 316  Q
    ||||||||||||||||||||||||| || |||||||||  ||||||||||||| |||||| |||| |||||| |||||||||||| | |||| |||||||    
T  5815598 agtatagttttttgtgttttctttgaaataagttttatgagaagatgtaaaaataatttttattgactattgattatggaaaaaaaggaagagagagaaa 5815499  T
Q  317 attgaatgtaatttgcatttaattt 341  Q
    |||||||||||||  ||||||||||    
T  5815498 attgaatgtaattgacatttaattt 5815474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 178 - 341
Target Start/End: Complemental strand, 19352020 - 19351851
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaat-ttggagtatagtttttt---gtgttttctttggaaaaagttttataggaagatgt-aaaaacaa 272  Q
    ||||||| |||||||||||| |||||||||| ||  |||||||||||||||||   |||||||| ||| || |||||| || ||||||||| ||||||||    
T  19352020 aatcacacttattaagaaaactaaaacataaaaaaattggagtatagtttttttgtgtgttttcattgaaataagtttcatgggaagatgttaaaaacaa 19351921  T
Q  273 ttttcattggctattggttatggaaaaaatgaaagaaagag-aaaattgaatgtaatttgcatttaattt 341  Q
    ||||||||||||||| |||||| ||| |||| || | |||| ||||||||||||||||||||||||||||    
T  19351920 ttttcattggctattagttatgaaaacaatggaatagagagaaaaattgaatgtaatttgcatttaattt 19351851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 178 - 342
Target Start/End: Original strand, 5064639 - 5064803
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||  |||||| |  ||| ||||||||||| |||||| || |||||||| |||||||||||||||||||||||    
T  5064639 aatcacacttattaagaaaactaaaacatagtaatttgtaacataattttttgtgttatctttgaaataagttttaaaggaagatgtaaaaacaattttc 5064738  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    ||| |   ||| |||| || ||||||||| | |||| |||||||||| | |||||||||||||||    
T  5064739 attagtagttgattatagagaaaatgaaaaagagagtaaattgaatgcactttgcatttaatttt 5064803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 186 - 266
Target Start/End: Complemental strand, 16473908 - 16473828
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaa 266  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16473908 ttattaagaaaactaaaatataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaa 16473828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 178 - 340
Target Start/End: Complemental strand, 32203381 - 32203226
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| | ||||| |||| ||||||||||||||||  |||||||||||||||  |||||||| || ||||||||| ||||||| ||||||||||||||    
T  32203381 aatcacactaattaaaaaaactaaaacataagaatttaaagtatagttttttgttgtttctttgaaataagttttatgggaagatataaaaacaattttc 32203282  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatt 340  Q
    |       ||||||||| ||||||||||| | |||||||||||||||||| || |||||||||    
T  32203281 a-------ttggttatgaaaaaaatgaaacatagagaaaattgaatgtaaattacatttaatt 32203226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 12002617 - 12002793
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtg-------ttttctttggaaaaagttttataggaagatgtaaaaac 270  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||       |||| |||||||  ||||| || | |||||||||||||    
T  12002617 aatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttttttttttttttggaattagtttcatggaaagatgtaaaaac 12002716  T
Q  271 aattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||| |||||| |||||||||||| ||| || ||||      | ||||||||||||||||||||||||| |||| |||||    
T  12002717 aatttttattggccattggttatggagaaactggaaga-----gatattgaatgtaatttgcatttaatttcatgaaaataa 12002793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 14583897 - 14583723
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgtttt-ctttggaaaaagttttataggaagatgtaaaaacaatttt 276  Q
    |||||||||||||||||||| ||||| ||||||||||    ||||||| |||||||||| ||||  || |||||| || |||||||||||||||| ||||    
T  14583897 aatcacatttattaagaaaactaaaatataagaatttaatatatagttatttgtgtttttctttaaaataagtttcatgggaagatgtaaaaaca-tttt 14583799  T
Q  277 cattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||||| | |||   | |||||| |||| || || |||||||||||||||||||||||||| ||||||||||    
T  14583798 cattggctatggattaaaaagaaaatggaagagagtgataattgaatgtaatttgcatttaatttcatgagaataa 14583723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 188 - 342
Target Start/End: Original strand, 46070517 - 46070668
Alignment:
Q  188 attaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctatt 287  Q
    |||||||||| |||||||||  | |||| |  ||||||||| ||||| |||||| || ||||||||||||||||||||||||||||||||||||| | ||    
T  46070517 attaagaaaactaaaacatagtagtttgtaacatagttttt-gtgttgtctttgaaataagttttataggaagatgtaaaaacaattttcattggttgtt 46070615  T
Q  288 ggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    |||||| || ||||||||||  |||| |||||||||| | |||||||||||||||    
T  46070616 ggttattgagaaaatgaaag--agagtaaattgaatgcactttgcatttaatttt 46070668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 178 - 288
Target Start/End: Original strand, 21722666 - 21722776
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||||| |||| ||||||||||||||||  |||||||| |||| ||||||||||| || |||||||||||||||||||||||| |||||||    
T  21722666 aatcacacttattaataaaactaaaacataagaattttaagtatagtgttttatgttttctttgtaataagttttataggaagatgtaaaaataattttc 21722765  T
Q  278 attggctattg 288  Q
    |||| ||||||    
T  21722766 attgactattg 21722776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 25297204 - 25297380
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttcttt----ggaaaaagttttataggaagatgtaaaaacaat 273  Q
    ||||||| |||||||||||| ||| |||||   |||| |||| |||||||||||||||| |||    | || |||||| || | ||||||||||||||||    
T  25297204 aatcacacttattaagaaaagtaatacatac--atttagagtctagttttttgtgttttttttttttgtaataagtttcatggaaagatgtaaaaacaat 25297301  T
Q  274 tttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||| ||||||| |||||  |||| |  |||||||||||||||||| |||||||||| ||||||||||    
T  25297302 tttcattggctattgattatggagaaaatagaagagatggaaaattgaatgtaatttacatttaatttcatgagaataa 25297380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 193 - 342
Target Start/End: Original strand, 47516190 - 47516339
Alignment:
Q  193 gaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggtta 292  Q
    ||||| |||||||||  | |||| | |||||||||||||||| |||||| || |||||||||||||||| |||||||||||||||||||| | |||||||    
T  47516190 gaaaagtaaaacatagtagtttgtaatatagttttttgtgttatctttgaaataagttttataggaagaagtaaaaacaattttcattggttgttggtta 47516289  T
Q  293 tggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    | || ||||||||||| |||| ||||  |||| | |||| ||||||||||    
T  47516290 ttgagaaaatgaaagagagagcaaatcaaatgcactttgtatttaatttt 47516339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 216 - 351
Target Start/End: Complemental strand, 50145865 - 50145731
Alignment:
Q  216 gagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaa 315  Q
    ||||||| || ||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||| | ||||| |||||| |||| || |||    
T  50145865 gagtataattgtttgtgttt-ctttggaataagttttatgggaagatgtaaacacaattttcattggctattgataatggagaaaatggaagagagggaa 50145767  T
Q  316 aattgaatgtaatttgcatttaattttatgagaata 351  Q
    |||| |||||||||  |||||||||| |||| ||||    
T  50145766 aattaaatgtaattaacatttaatttcatgaaaata 50145731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 220 - 342
Target Start/End: Original strand, 5841805 - 5841927
Alignment:
Q  220 atagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaatt 319  Q
    ||||||| ||||||| || ||| || || ||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||| |||| |||||    
T  5841805 atagtttcttgtgttatccttgaaataaattttataggaagatgtaaaaataattttcattggttattggttattgaaaaaatgaaagagagagcaaatt 5841904  T
Q  320 gaatgtaatttgcatttaatttt 342  Q
    || || | |||||||| ||||||    
T  5841905 gattgcactttgcattgaatttt 5841927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 220 - 342
Target Start/End: Original strand, 8178265 - 8178387
Alignment:
Q  220 atagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaatt 319  Q
    |||||||  |||||| |||||| || |||||||||| |||||||||||||||||||  ||||| |||||||||| || ||||||||||| |||| |||||    
T  8178265 atagtttcatgtgttatctttgaaataagttttataagaagatgtaaaaacaatttgtattggttattggttattgagaaaatgaaagagagagcaaatt 8178364  T
Q  320 gaatgtaatttgcatttaatttt 342  Q
    ||||| | |||||||||||||||    
T  8178365 gaatgcactttgcatttaatttt 8178387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 337
Target Start/End: Original strand, 17799124 - 17799277
Alignment:
Q  184 atttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggc 283  Q
    |||||||||||||| ||||| || | ||||||||||||| ||| | ||||| |  ||||||  |||||||| |||||||||||||||||||||||||||     
T  17799124 atttattaagaaaactaaaatatgataatttggagtataatttctggtgttcttcttggaattagttttatgggaagatgtaaaaacaattttcattggt 17799223  T
Q  284 tattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcattta 337  Q
    |||| |||||||| ||||||| ||  |||  ||||| |||| ||||||||||||    
T  17799224 tatttgttatggagaaaatgagagggagaacaaattaaatgcaatttgcattta 17799277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 220 - 349
Target Start/End: Original strand, 17186822 - 17186940
Alignment:
Q  220 atagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaatt 319  Q
    |||||||||||| ||||||||| |||   ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||         |||    
T  17186822 atagttttttgtattttctttg-aaatttttttataggaagatgtaaaaataagtttcattggctattggttatggaaaaaatgaaag---------att 17186911  T
Q  320 gaatgtaatttgcatttaattttatgagaa 349  Q
    |||| |||||||||||||||||||||||||    
T  17186912 gaat-taatttgcatttaattttatgagaa 17186940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 178 - 342
Target Start/End: Original strand, 8013073 - 8013237
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    |||||||||||||||||||| |||||||||  | |||| |  ||||||| ||||||| || ||| || |||||| |||| |||||||||||||||||||     
T  8013073 aatcacatttattaagaaaactaaaacatagtagtttgtaacatagtttcttgtgttatccttgaaataagtttcatagaaagatgtaaaaacaattttt 8013172  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    ||||| |||| || || || ||||||||||| |||  | | |||||| || ||||||||||||||    
T  8013173 attggttattagtcatagagaaaatgaaagagagaacataatgaatgcaaattgcatttaatttt 8013237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 206 - 352
Target Start/End: Complemental strand, 31280329 - 31280193
Alignment:
Q  206 taagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaa 305  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||      ||||||||| ||||||||||||||||| ||||||| | ||||| |    
T  31280329 taagaatttagagtatagttttttgtgttttctttggaataagttttat------atgtaaaaataattttcattggctatt-gttatgg-agaaatgga 31280238  T
Q  306 agaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||  ||||||||||||||| | |||| ||||||||| || |||||||    
T  31280237 ag--agagaaaattgaatgcagtttgtatttaatttcattagaataa 31280193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 30011913 - 30012074
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| ||||||||||| |||||| ||   ||||||  ||||| ||||||||||| | ||||||| |||||| || | ||||||||||||||||| ||||    
T  30011913 tcacacttattaagaaagttaaaatattgtaatttgaggtataattttttgtgttatttttggaataagtttcatggaaagatgtaaaaacaattatcat 30012012  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| || |  ||||||| |||||  || |||||  |||||||||| ||||||||||||||||||    
T  30012013 tggttaattattatggagaaaat--aaaaaagaacaaattgaatgcaatttgcatttaatttta 30012074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 248 - 342
Target Start/End: Original strand, 23978169 - 23978263
Alignment:
Q  248 gttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    |||||||||||||||||||||||||||||||||||   ||| |||| || ||||||||| | |||| |||||||||| | |||||||||||||||    
T  23978169 gttttataggaagatgtaaaaacaattttcattggtagttgattatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttt 23978263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 200 - 302
Target Start/End: Original strand, 32280009 - 32280111
Alignment:
Q  200 aaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaa 299  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||| | |||| ||    | |||||||||||||||| ||||||||||| ||||||| ||    
T  32280009 aaaacataagaatttggagtataattttttgtgttttctttagaataggtttgatgaagatatgtaaaaacaattttaattggctattgattatggagaa 32280108  T
Q  300 aat 302  Q
    |||    
T  32280109 aat 32280111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 178 - 342
Target Start/End: Complemental strand, 32410496 - 32410332
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| || ||||||  | |||  | || ||||||||||||| |||||| || |||||||||||||||||||||||| |||||||    
T  32410496 aatcacacttattaagaaaactacaacatagtagtttataataaagttttttgtgttatctttgaaataagttttataggaagatgtaaaaataattttc 32410397  T
Q  278 attggcta-ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    ||| |||| ||  |||| || ||||| ||| | |||| |||||||||  | |||||||||||||||    
T  32410396 att-gctagttaattatagagaaaataaaaaagagagcaaattgaatacactttgcatttaatttt 32410332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 178 - 342
Target Start/End: Original strand, 28142606 - 28142769
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| ||||| || | | |||| |  ||| ||||||||||| |||||  || ||||||||||||| ||||||||||||||||||    
T  28142606 aatcacacttattaagaaaactaaaatatgatagtttgtaacataattttttgtgttatctttaaaataagttttataggaggatgtaaaaacaattttc 28142705  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    |||||   ||| |||| || ||||||||| | |||| ||||| ||||   |||||||||||||||    
T  28142706 attggtagttgattatagagaaaatgaaaaagagagcaaattaaatg-cttttgcatttaatttt 28142769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 184 - 341
Target Start/End: Complemental strand, 40553935 - 40553774
Alignment:
Q  184 atttattaagaaaattaaaacataagaatttggagtatagtttttt----gtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||| |||||||||  | |||| |||||||||| ||    ||||| || || ||| |||||| |||| ||||||||||||||| ||||||    
T  40553935 atttactaagaaaactaaaacatagtagtttgcagtatagtttctttcttgtgttatccttagaataagtttcatagaaagatgtaaaaacaagtttcat 40553836  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattt 341  Q
    ||| |||| |||||||| ||| |||||   |||| ||| |||||| ||||||||||||||||    
T  40553835 tggttattagttatggagaaagtgaaaaggagagtaaaatgaatgcaatttgcatttaattt 40553774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 220 - 342
Target Start/End: Complemental strand, 37912010 - 37911888
Alignment:
Q  220 atagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaatt 319  Q
    ||||||||||||||| |||||  || ||||||||||| || ||||||||||||||||||||||   ||| |||| || ||||| ||| | |||| |||||    
T  37912010 atagttttttgtgttatctttaaaataagttttatagaaatatgtaaaaacaattttcattggtagttgattatagagaaaataaaaaagagagcaaatt 37911911  T
Q  320 gaatgtaatttgcatttaatttt 342  Q
     |||| | |||||||||||||||    
T  37911910 caatgcactttgcatttaatttt 37911888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 224 - 342
Target Start/End: Complemental strand, 49080379 - 49080261
Alignment:
Q  224 ttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaat 323  Q
    |||||||| || |||||| || |||||||||||||||||||||||||||||||||||||   ||| |||  |  ||||||||| | |||  |||||||||    
T  49080379 ttttttgtcttatctttgaaataagttttataggaagatgtaaaaacaattttcattggtagttgattacagggaaaatgaaaaagagatcaaattgaat 49080280  T
Q  324 gtaatttgcatttaatttt 342  Q
    | | |||||||||||||||    
T  49080279 gcactttgcatttaatttt 49080261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 220 - 281
Target Start/End: Complemental strand, 29511551 - 29511490
Alignment:
Q  220 atagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 281  Q
    ||||||||||||||| |||||  || ||||||||||||||||||||||||||||||||||||    
T  29511551 atagttttttgtgttatctttaaaataagttttataggaagatgtaaaaacaattttcattg 29511490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 220 - 342
Target Start/End: Original strand, 28318445 - 28318565
Alignment:
Q  220 atagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaatt 319  Q
    ||||||||||||||| |||||| || ||  |||||||||||||||||||||||||||||||||   ||| |||| || ||||||||| |   || |||||    
T  28318445 atagttttttgtgttatctttgaaataa--tttataggaagatgtaaaaacaattttcattggtagttgattatagagaaaatgaaaaagctagtaaatt 28318542  T
Q  320 gaatgtaatttgcatttaatttt 342  Q
    ||||| | ||| |||||||||||    
T  28318543 gaatgcattttacatttaatttt 28318565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 29180371 - 29180534
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| ||| || ||   |||||  ||||| ||||||||||| || |||||| |||||| |||| |||||||||||| |||| ||||    
T  29180371 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatagaaagatgtaaaaataattctcat 29180470  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| ||    ||||||| ||||| |||   |||  |||||||||| ||||||||||||||||||    
T  29180471 tggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 29180534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 178 - 342
Target Start/End: Complemental strand, 53848628 - 53848471
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||||||||||  ||||||||  | |||| |  ||||||| ||||||| || ||| || || ||||||||||||| ||||||||||||||     
T  53848628 aatcacacttattaagaaaacaaaaacatagtagtttgcaacatagtttcttgtgttatccttgaaataatttttataggaagacgtaaaaacaatttt- 53848530  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
           ||||||||| |||||||||||||| | || |||||||||| | |||||||||| ||||    
T  53848529 ------aattggttattgaaaaaatgaaagagaaagcaaattgaatgcactttgcatttattttt 53848471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 372 - 417
Target Start/End: Original strand, 17186992 - 17187037
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  17186992 gataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 17187037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 16605046 - 16605090
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  16605046 ataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 16605090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 35529612 - 35529568
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  35529612 ataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 35529568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 30776443 - 30776606
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| ||| || ||   |||||  ||||| ||||||||||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  30776443 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 30776542  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| ||    ||||||| ||||| |||   |||  |||||||||| ||||||||||||||||||    
T  30776543 tggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 30776606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 38941030 - 38940867
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| ||| || |||  |||||  ||||| ||||||||||| || |||||| |||||| ||   |||||||||||| |||| ||||    
T  38941030 tcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtgttctccttggaataagtttcattaaaagatgtaaaaataattctcat 38940931  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||  ||    || |||||||||| |||  ||||  |||||||||| ||||||||||||||||||    
T  38940930 tgattaaaaattttggaaaaaataaaaagaagaataaattgaatgcaatttgcatttaatttta 38940867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 39969948 - 39970111
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| ||| || ||   |||||  ||||| ||||||||||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  39969948 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 39970047  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| ||    ||||||| ||||| |||   |||  |||||||||| ||||||||||||||||||    
T  39970048 tggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 39970111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 373 - 416
Target Start/End: Complemental strand, 42915470 - 42915427
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaat 416  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  42915470 ataaaagtttgtcttttttgcttatattttgggacaaagaaaat 42915427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 47807356 - 47807193
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| ||||||||||||||||  | ||   |||||  ||||| ||||||||||| ||||||||| |||||| || | |||||||||||| |||| || |    
T  47807356 tcacacttattaagaaaattaatccttagtgatttgaggtataattttttgtgttctctttggaataagtttcatggaaagatgtaaaaataattctcgt 47807257  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| ||    ||||||| ||||| |||   |||  |||||||||| ||||||||||||||||||    
T  47807256 tggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 47807193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 53677438 - 53677601
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| ||| || ||   |||||  ||||| ||||||||||| || ||||||  ||||| |||| |||||||||||| |||| ||||    
T  53677438 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaatgagtttcatagaaagatgtaaaaataattctcat 53677537  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| ||    ||||||| ||||| |||   |||  |||||||||| ||||||||||||||||||    
T  53677538 tggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 53677601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 417
Target Start/End: Complemental strand, 55580607 - 55580564
Alignment:
Q  374 taaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  55580607 taaaagtttgtcttttttgcttatattttgggacaaagaaaatg 55580564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 7438810 - 7438760
Alignment:
Q  184 atttattaagaaaattaaaacataagaatttggagtatagttttttgtgtt 234  Q
    |||||||||||||| |||||||||| ||||||||||||||||||| |||||    
T  7438810 atttattaagaaaactaaaacataataatttggagtatagtttttggtgtt 7438760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 180 - 282
Target Start/End: Complemental strand, 29899876 - 29899774
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    |||||||||||||||||| ||| || ||   |||||  ||||| ||||||||||| || |||||| ||||||||| | |||||||||||| |||| ||||    
T  29899876 tcacatttattaagaaaactaacacgtagtgatttgaggtataattttttgtgttctccttggaataagttttatggaaagatgtaaaaataattctcat 29899777  T
Q  280 tgg 282  Q
    |||    
T  29899776 tgg 29899774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 218 - 343
Target Start/End: Original strand, 10591500 - 10591625
Alignment:
Q  218 gtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaa 317  Q
    ||||| ||||||||||| || |||||| |||||| || | |||||||||||| |||| ||||||| ||    ||||||||||||| |||   |||   ||    
T  10591500 gtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcattggttaaaaattatggaaaaaataaaaaggagaaccaa 10591599  T
Q  318 ttgaatgtaatttgcatttaatttta 343  Q
    ||||||| ||||||||||||||||||    
T  10591600 ttgaatgcaatttgcatttaatttta 10591625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 407
Target Start/End: Complemental strand, 29203451 - 29203414
Alignment:
Q  370 aagataaaagtttgtcttttttgcttatattttgggac 407  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29203451 aagataaaagtttgtcttttttgcttatattttgggac 29203414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 39078099 - 39078054
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||    
T  39078099 gataaaagtttgtcttttttacttatattttgggacaaagaaaatg 39078054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 194 - 302
Target Start/End: Complemental strand, 25268631 - 25268523
Alignment:
Q  194 aaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 293  Q
    |||||||||| |||| ||||||| |||||  |||||||||| |  ||| || |||||| | | |||||  |||||| |||||||||||| ||||||||||    
T  25268631 aaaattaaaatataataatttggggtatatctttttgtgttctacttgaaataagtttcacaagaagaaataaaaataattttcattggttattggttat 25268532  T
Q  294 ggaaaaaat 302  Q
    ||| |||||    
T  25268531 ggagaaaat 25268523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 32012491 - 32012535
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||    
T  32012491 ataaaagtttgtcttttttgcttatattttgagacaaagaaaatg 32012535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 48793837 - 48793881
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||    
T  48793837 ataaaagtttgtcttttatgcttatattttgggacaaagaaaatg 48793881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 343
Target Start/End: Complemental strand, 50768567 - 50768443
Alignment:
Q  219 tatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaat 318  Q
    |||| |||||||||||||| |||||| |||||| || | |||||||||||| |||||||||||| ||    ||||||| ||||| |||   |||  ||||    
T  50768567 tataattttttgtgttttccttggaataagtttcatggaaagatgtaaaaataattttcattggttaaaaattatggagaaaataaaaaggagaacaaat 50768468  T
Q  319 tgaatgtaatttgcatttaatttta 343  Q
    | |||| || |||||||||||||||    
T  50768467 taaatgcaacttgcatttaatttta 50768443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 37788612 - 37788449
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| ||| || ||   |||||  ||||| ||||||||||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  37788612 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 37788513  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| ||    ||||||| ||||| ||| | |||  ||||| |||| || |||||||||||||||    
T  37788512 tggttaaaaattatggagaaaataaaaaagagaacaaattaaatgcaagttgcatttaatttta 37788449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 248 - 343
Target Start/End: Complemental strand, 40411199 - 40411104
Alignment:
Q  248 gttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||||||||||||||||||||||||||||| |||||   ||| |||  || ||||||||| | |||  |||||||||| | ||| ||||||||||||    
T  40411199 gttttataggaagatgtaaaaacaatttttattggtagttgattacagagaaaatgaaaaagagatcaaattgaatgcagtttacatttaatttta 40411104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 414
Target Start/End: Complemental strand, 4058656 - 4058614
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaa 414  Q
    ||||||||||||||||||||||||||||||| |||||| ||||    
T  4058656 gataaaagtttgtcttttttgcttatattttaggacaaagaaa 4058614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 419
Target Start/End: Original strand, 30012117 - 30012163
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    |||||||||  |||||||||||||||||||||||||| |||||||||    
T  30012117 ataaaagttgatcttttttgcttatattttgggacaaagaaaatgtg 30012163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 419
Target Start/End: Original strand, 47516383 - 47516429
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    ||||||||| |||||||||||||||| |||||||||| |||||||||    
T  47516383 ataaaagttggtcttttttgcttataatttgggacaaagaaaatgtg 47516429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 372 - 409
Target Start/End: Complemental strand, 10069638 - 10069601
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  10069638 gataaaagtttttcttttttgcttatattttgggacaa 10069601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 311 - 352
Target Start/End: Original strand, 32280104 - 32280145
Alignment:
Q  311 gagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||||||||||||||| ||| ||||||||||    
T  32280104 gagaaaattgaatgtaatttgcatttagtttcatgagaataa 32280145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 409
Target Start/End: Original strand, 29180576 - 29180612
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||||||||||||||||||||||||||||| |||||    
T  29180576 ataaaagtttgtcttttttgcttatattttgagacaa 29180612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 31532444 - 31532496
Alignment:
Q  185 tttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttc 237  Q
    ||||||||||||| |||||||| | ||||| |||||||||||||| |||||||    
T  31532444 tttattaagaaaactaaaacattacaatttagagtatagttttttatgttttc 31532496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 35310954 - 35310998
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||||||||||||||||||||  ||||| |||||||    
T  35310954 ataaaagtttgtcttttttgcttatattttaagacaaagaaaatg 35310998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 50768401 - 50768357
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||| ||||||||||||||||||||| ||||| |||||||    
T  50768401 ataaaagttggtcttttttgcttatattttgagacaaagaaaatg 50768357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 4443084 - 4443126
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtat 221  Q
    |||||||||||||||||||||| ||||||||||||||| |||||    
T  4443084 aatcacatttattaagaaaatt-aaacataagaatttgcagtat 4443126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 5222252 - 5222415
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| ||| |||||  ||||||   |||| ||||||||||| |  ||| || |||||| |||  || |||||||||||||| | ||    
T  5222252 tcacacttattaagaaaactaatacatagtaatttgagttataattttttgtgttcttcttgaaataagtttcataaaaaaatgtaaaaacaattcttat 5222351  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| || || |||| | |||||| |||   |||  ||||| |||| ||||||||||||||||||    
T  5222352 tggataatgattataggaaaaataaaaaggagaacaaattcaatgcaatttgcatttaatttta 5222415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 302
Target Start/End: Complemental strand, 37872762 - 37872657
Alignment:
Q  194 aaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 293  Q
    ||||||||||||| | ||||||| |||||  |||||||||| | |||| || |||||| ||   |||| ||||||| |||||||||||  |||| |||||    
T  37872762 aaaattaaaacatgataatttggggtatatctttttgtgttctatttgaaataagtttcat---aagaagtaaaaataattttcattgattattagttat 37872666  T
Q  294 ggaaaaaat 302  Q
    ||| |||||    
T  37872665 ggagaaaat 37872657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 409
Target Start/End: Complemental strand, 4512992 - 4512955
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  4512992 gataaaagttggtcttttttgcttataatttgggacaa 4512955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 414
Target Start/End: Original strand, 12002846 - 12002887
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaa 414  Q
    |||||||||||||||||||||||| |||| ||||||| ||||    
T  12002846 ataaaagtttgtcttttttgcttacatttagggacaaagaaa 12002887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 352
Target Start/End: Original strand, 21722783 - 21722824
Alignment:
Q  311 gagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||    
T  21722783 gagaaaattaaatgtaatttgtatttaatttcatgagaataa 21722824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 417
Target Start/End: Original strand, 52535809 - 52535842
Alignment:
Q  384 tcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||||||||||||||||||| |||||||    
T  52535809 tcttttttgcttatattttgggacaatgaaaatg 52535842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 401
Target Start/End: Original strand, 8683515 - 8683543
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattt 401  Q
    |||||||||||||||||||||||||||||    
T  8683515 ataaaagtttgtcttttttgcttatattt 8683543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 409
Target Start/End: Original strand, 30776648 - 30776684
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  30776648 ataaaagttggtcttttttgcttatattttgagacaa 30776684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 409
Target Start/End: Complemental strand, 30777443 - 30777407
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  30777443 ataaaagttggtcttttttgcttatattttgagacaa 30777407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 38940825 - 38940781
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||| || |||||||||||||||||| ||||| |||||||    
T  38940825 ataaaagttggtattttttgcttatattttgagacaaagaaaatg 38940781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 55937867 - 55937911
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||| ||||||||||||||||||||  ||||| |||||||    
T  55937867 ataaaagttggtcttttttgcttatattttaagacaaagaaaatg 55937911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 186; Significance: 1e-100; HSPs: 91)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 178 - 419
Target Start/End: Complemental strand, 6686555 - 6686311
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaa-gttttataggaagatgtaaaaacaatttt 276  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6686555 aatcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaaagttttataggaagatgtaaaaacaatttt 6686456  T
Q  277 cattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac--nnnnnnnntcttggaaaagat 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||    
T  6686455 cattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaaatcttggaaaagat 6686356  T
Q  375 aaaagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    |||||||| ||||||||| |||||||||||||||| |||||||||    
T  6686355 aaaagtttatcttttttgtttatattttgggacaaagaaaatgtg 6686311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 178 - 419
Target Start/End: Original strand, 43589953 - 43590195
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  43589953 aatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttttgaaaaagttttatagggagatgtaaaaacaattttc 43590052  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac-nnnnnnnntcttggaaaagataa 376  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||| |||||||||    
T  43590053 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaatcttgaaaaagataa 43590152  T
Q  377 aagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    |||||||| ||||||||||||||||||| |||| |||||||||    
T  43590153 aagtttgtattttttgcttatattttggtacaaagaaaatgtg 43590195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 178 - 419
Target Start/End: Original strand, 11261875 - 11262117
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||| ||| ||| |||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11261875 aatcacacttattaagtaaactaacacatgagaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttc 11261974  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaat-aacnnnnnnnntcttggaaaagataa 376  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||        |||||||||||||||    
T  11261975 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcttggaaaagataa 11262074  T
Q  377 aagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    ||||||||||||||| ||||||||||||||||| |||||||||    
T  11262075 aagtttgtcttttttacttatattttgggacaaagaaaatgtg 11262117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 178 - 419
Target Start/End: Original strand, 37562752 - 37562995
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttcttt-ggaaaaagttttataggaagatgtaaaaacaatttt 276  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  37562752 aatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttttttttggaaaaagttttataggaagatgtaaaaacaatttt 37562851  T
Q  277 cattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaat-aacnnnnnnnntcttggaaaagata 375  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||        || |||||||||||    
T  37562852 cattagctattgtttatggaaaaaatgaaagacagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcatggaaaagata 37562951  T
Q  376 aaagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    |||||||||||||||||||||||||||||||| | |||||||||    
T  37562952 aaagtttgtcttttttgcttatattttgggacgaagaaaatgtg 37562995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 190 - 419
Target Start/End: Original strand, 37522592 - 37522823
Alignment:
Q  190 taagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattgg 289  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  37522592 taagaaaactaaaacataagaatttggagtatagttttttgtgttttttttggaaaaagttttataggaagatgtaaaaacaattttcattggctattgt 37522691  T
Q  290 ttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaa-ttttatgagaata-acnnnnnnnntcttggaaaagataaaagtttgtctt 387  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||        || |||||||||||||||||||||||    
T  37522692 ttatggaaaaaatgaaagacagagaaaattgaatgtaatttgcatttaatttttatgagaatagacaaaaaaaatcatggaaaagataaaagtttgtctt 37522791  T
Q  388 ttttgcttatattttgggacaacgaaaatgtg 419  Q
    |||||||||||||||||||| | |||||||||    
T  37522792 ttttgcttatattttgggacgaagaaaatgtg 37522823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 20644184 - 20644010
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20644184 aatcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 20644085  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||    
T  20644084 attggctattggttatggaaaaaatgaaagagagggaaaattgaatgtaatttgcatttaatttcatgagaataa 20644010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 42273817 - 42273645
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  42273817 aatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataagaagatgtaaaaacaattttc 42273718  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||||| |||||||||||||||||||||||||||    
T  42273717 attggctattggttatggagaaaatgaaag--agagaaaattgaatgcaatttgcatttaattttatgagaataa 42273645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 181 - 352
Target Start/End: Complemental strand, 34425497 - 34425327
Alignment:
Q  181 cacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 280  Q
    |||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  34425497 cacacttattaagaaaactaaaacataagaatttgaagtatagttttttgtgttttctttgaaaaaagttttataggaatatgtaaaaacaattttcatt 34425398  T
Q  281 ggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||| ||||||| ||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  34425397 ggctattgattatgga-aaaataaaagagagagaaaattgaatataatttgcatttaattttatgagaataa 34425327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 180 - 350
Target Start/End: Complemental strand, 20039270 - 20039100
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||| ||||||| ||    
T  20039270 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttgaaaaaggttttataggaagatgtaaaaccaatttttat 20039171  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaat 350  Q
    ||||||||||||||| ||||||||||||| | |||||||| ||||||||||||||||||||||||||||||    
T  20039170 tggctattggttatgaaaaaaatgaaagagatagaaaattaaatgtaatttgcatttaattttatgagaat 20039100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 187 - 352
Target Start/End: Original strand, 38130113 - 38130281
Alignment:
Q  187 tattaagaaaattaaaacataagaatttggagtatagt---tttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggc 283  Q
    ||||||||||| ||||||||||||||||||| ||||||   |||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||    
T  38130113 tattaagaaaactaaaacataagaatttggaatatagtagttttttgtgttttctttagaaaaagttttataggaatatgtaaaaataattttcattggc 38130212  T
Q  284 tattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||    
T  38130213 tattggttatggaaaaaatgaaagagagagaaaattgaatgtaatctacatttaattttatgagaataa 38130281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 206 - 352
Target Start/End: Complemental strand, 32111144 - 32110998
Alignment:
Q  206 taagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaa 305  Q
    ||||||||||||||||| | |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  32111144 taagaatttggagtataatgttttgtgttttctttgaaaaaagtttcataggaagatgtaaaaacaattttcattgactattggttatggaaaatatgaa 32111045  T
Q  306 agaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||| |||||||||| ||||||||||||||||||||||||||||||||    
T  32111044 agagagagaaaattaaatgtaatttgcatttaattttatgagaataa 32110998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 184 - 351
Target Start/End: Complemental strand, 19413305 - 19413138
Alignment:
Q  184 atttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggc 283  Q
    |||||||||||||| ||||  ||||||||||| || |||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||    
T  19413305 atttattaagaaaactaaagtataagaatttgtagcatagttttttgtgttttctttgaaataagttttatgggaagatgtaaaaacaattttcattggc 19413206  T
Q  284 tattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaata 351  Q
     |||||||||||||||||| ||||| || ||||||| ||||||||||||||||||||| |||||||||    
T  19413205 aattggttatggaaaaaataaaagagagggaaaattaaatgtaatttgcatttaatttcatgagaata 19413138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 25841034 - 25840860
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||| ||||| |||||| || ||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||    
T  25841034 aatcacacttattaagaaaactaaagcataaaaatttgtagcatagttttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattttc 25840935  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||| | |||| ||||||||||||| ||||| |||||||||| ||||||||||||||||||||| ||||||||||    
T  25840934 attgacaattgtttatggaaaaaataaaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataa 25840860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 202 - 352
Target Start/End: Complemental strand, 8225608 - 8225459
Alignment:
Q  202 aacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgt-aaaaacaattttcattggctattggttatggaaaaa 300  Q
    |||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||| ||||| || |||||||||||||||||||||||||||    
T  8225608 aacaaaagaatttggactatagttttttgtattttctttggaaaaagttttataggaaaatgtaaaaaaaaaatttcattggctattggttatggaaaaa 8225509  T
Q  301 atgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||  ||||||||||||| |||||||||||||||||||||||||||||    
T  8225508 atgaaag--agagaaaattgaacgtaatttgcatttaattttatgagaataa 8225459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 39505223 - 39505397
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagtttt-ttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 276  Q
    ||||||| ||||||| |||||||||  ||||||||||| || |||||||| ||||||||||||||||| ||||||||| | |||||||||||||||||||    
T  39505223 aatcacacttattaaaaaaattaaagtataagaatttgtagcatagtttttttgtgttttctttggaataagttttatggtaagatgtaaaaacaatttt 39505322  T
Q  277 cattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||| ||| ||||||| |||||| ||||| |||||||||| ||||||||||||||||||||| ||||||||||    
T  39505323 cattggcaattcgttatgg-aaaaataaaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataa 39505397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 17351558 - 17351384
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    |||||||||||||||||||| ||| || ||| || ||||||||||||||||| | ||||| |||||| ||||||||| | |||||||||||||||||||     
T  17351558 aatcacatttattaagaaaactaatacgtaaaaacttggagtatagttttttttattttcgttggaataagttttatggaaagatgtaaaaacaatttta 17351459  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||| ||||||| ||||||| | | ||||||||||||||||||||| |||||||||| ||||||||||    
T  17351458 attggctattgattatggagaaaatgacatagagagaaaattgaatgtaattttcatttaatttcatgagaataa 17351384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 226 - 352
Target Start/End: Complemental strand, 38280969 - 38280843
Alignment:
Q  226 ttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgt 325  Q
    ||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||| |    
T  38280969 ttttgtgctttctttgaaaaaagttttataggaaaatgtaaaaacaattttcattggttattgattatggaaaaaatgaaagagagagaaaattgaatat 38280870  T
Q  326 aatttgcatttaattttatgagaataa 352  Q
    |||||||||||||||||||||||||||    
T  38280869 aatttgcatttaattttatgagaataa 38280843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 186 - 348
Target Start/End: Original strand, 43454322 - 43454484
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    |||||||||||||||||||||||||| ||| | |||||||||||||||||||||||  | |||||||||||||| ||||||||||||||||||||  |||    
T  43454322 ttattaagaaaattaaaacataagaacttgaaatatagttttttgtgttttctttgtcataagttttataggaatatgtaaaaacaattttcatttacta 43454421  T
Q  286 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgaga 348  Q
    ||||||| | | ||||| ||||| ||||||||||||||||||||| ||||||||| |||||||    
T  43454422 ttggttaagaagaaaataaaagagagagaaaattgaatgtaatttacatttaattctatgaga 43454484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 4463528 - 4463356
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||| |||||||||||| || || ||| |  ||||||||||||||| ||| || || ||||||||||||||||||||||    
T  4463528 aatcacacttattaagaaaactaaagcataagaatttgtagcatggttgt--gtgttttctttggaataagcttcatgggaagatgtaaaaacaattttc 4463431  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    | ||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||| ||||| ||||    
T  4463430 actggctattggttatggaaaaaatgaaagagagagaaaattaaatgtaatttgcaattaatttcatgagtataa 4463356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 186 - 342
Target Start/End: Original strand, 12912294 - 12912449
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    |||||||||||| ||||||||| | | ||||| |||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||| ||    
T  12912294 ttattaagaaaactaaaacata-gtagttggaatatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcattggtta 12912392  T
Q  286 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    |||||| | |||||||||||||| |||| ||||| |||| | |||||||||||||||    
T  12912393 ttggttgttgaaaaaatgaaagagagagcaaattaaatgcactttgcatttaatttt 12912449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 205 - 352
Target Start/End: Original strand, 5984126 - 5984280
Alignment:
Q  205 ataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc-------attggctattggttatggaa 297  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||       ||||| |||||||||| ||     
T  5984126 ataagaatttagagtatagttttttgtgttttctttggaataagttttatagaaatatgtaaaaacaattttcattgactattggttattggttatagag 5984225  T
Q  298 aaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||| |||||| ||| |||||||||| |||||||||||||||||||||    
T  5984226 aaaatgaaagagagagaatatttaatgtaatttacatttaattttatgagaataa 5984280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 242 - 352
Target Start/End: Complemental strand, 32017809 - 32017700
Alignment:
Q  242 gaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattt 341  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||| ||||||| ||||||||||||||||||||||||    
T  32017809 gaaaacgttttataggaagatgtaaaaacaattttcattgtctattggttatgga-aaaacgaaagagagagaaagttgaatgtaatttgcatttaattt 32017711  T
Q  342 tatgagaataa 352  Q
    |||||||||||    
T  32017710 tatgagaataa 32017700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 9957426 - 9957581
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||               ||||||||||||||||||    
T  9957426 aatcacacttattaagaaaactaaaacatgagaatttggagtatagttttt-gtgttttctttggaa---------------gatgtaaaaacaattttc 9957509  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||||||||||| |||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||    
T  9957510 attggctattggttat-gaaaaaatgaaag--agagaaagttgaatgtaatttgcatttaattttatgagaataa 9957581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 199 - 347
Target Start/End: Original strand, 42104262 - 42104408
Alignment:
Q  199 taaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaa 298  Q
    |||||||||||||||||||||||| ||||  ||||| ||||||||| |||||| || ||||||||||||||||||||||||||||||||  ||||||| |    
T  42104262 taaaacataagaatttggagtataatttt--gtgttctctttggaacaagtttcatgggaagatgtaaaaacaattttcattggctattaattatggaga 42104359  T
Q  299 aaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgag 347  Q
    ||||| ||||  || ||||||||||||| |||||||||||||| |||||    
T  42104360 aaatggaagagtgataaaattgaatgtattttgcatttaatttcatgag 42104408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 192 - 352
Target Start/End: Original strand, 41625517 - 41625675
Alignment:
Q  192 agaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggtt 291  Q
    |||||| ||||||||||||||||  | ||||||||||||||||||||||| || |||||| |||||||||||||||||  ||||||||| ||||||| ||    
T  41625517 agaaaactaaaacataagaatttaaa-tatagttttttgtgttttctttgaaataagtttcataggaagatgtaaaaattattttcattcgctattgatt 41625615  T
Q  292 atggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    || ||||||||| |||| || ||||||| ||||||||||| ||||||||| |||| |||||    
T  41625616 at-gaaaaaatggaagagagggaaaattaaatgtaatttgaatttaatttcatgaaaataa 41625675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 178 - 314
Target Start/End: Original strand, 12792777 - 12792903
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||||| |||| ||||||||||||| |||||||||||||||||||||||||||         ||||||||||||| ||||| |||||||||    
T  12792777 aatcacacttattaaaaaaactaaaacataagaaattggagtatagttttttgtgttttctt---------ttttataggaaga-gtaaagacaattttc 12792866  T
Q  278 attggctattggttatggaaaaaatgaaagaaagaga 314  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  12792867 attggctattggttatggagaaaatgaaagagagaga 12792903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 178 - 314
Target Start/End: Complemental strand, 23233581 - 23233445
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||| |||||  |||||||||||||||||  |||||||||||||||||||||||| ||| |  |||||||||| ||||||||||| ||||     
T  23233581 aatcacacttattgagaaatctaaaacataagaatttgacgtatagttttttgtgttttctttgaaaacaactttataggaatatgtaaaaacagttttt 23233482  T
Q  278 attggctattggttatggaaaaaatgaaagaaagaga 314  Q
    |||  |||||||||||||| ||||||||||| |||||    
T  23233481 attaactattggttatggagaaaatgaaagagagaga 23233445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 233 - 351
Target Start/End: Original strand, 104260 - 104386
Alignment:
Q  233 ttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaa--------agaaagagaaaattgaatg 324  Q
    |||| |||| |||||||||||||| ||||||||||||||||||||||| |||||| |||||| ||||||||||        ||| |||||||||||||||    
T  104260 ttttttttgaaaaaagttttatagaaagatgtaaaaacaattttcattagctattagttatgaaaaaaatgaaagagagagagagagagaaaattgaatg 104359  T
Q  325 taatttgcatttaattttatgagaata 351  Q
    |||| ||||||||||||||||||||||    
T  104360 taatatgcatttaattttatgagaata 104386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 246 - 342
Target Start/End: Original strand, 10153987 - 10154083
Alignment:
Q  246 aagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| || || ||||||||||| | || |||||||||| | |||||||||||||||    
T  10153987 aagttttataggaagatgtaaaaacaattttcattggttattggtcattgagaaaatgaaagagatagcaaattgaatgcactttgcatttaatttt 10154083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 178 - 314
Target Start/End: Original strand, 12729876 - 12730001
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||||| |||| ||||||||||||| |||||||||||||||||||||||||||         ||||||||||||| ||||| |||||||||    
T  12729876 aatcacacttattaa-aaaactaaaacataagaaattggagtatagttttttgtgttttctt---------ttttataggaaga-gtaaagacaattttc 12729964  T
Q  278 attggctattggttatggaaaaaatgaaagaaagaga 314  Q
    ||||||||||||||||||| ||||||| ||| |||||    
T  12729965 attggctattggttatggagaaaatgagagagagaga 12730001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 220 - 342
Target Start/End: Original strand, 5369064 - 5369186
Alignment:
Q  220 atagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaatt 319  Q
    ||||||||||||||| | |||  || ||||||||||||||||||||||||||||||||||||| | |||||||| || ||||||||||| || |   |||    
T  5369064 atagttttttgtgttatttttaaaataagttttataggaagatgtaaaaacaattttcattggttgttggttattgagaaaatgaaagagagggcttatt 5369163  T
Q  320 gaatgtaatttgcatttaatttt 342  Q
    ||||| | |||||||||||||||    
T  5369164 gaatgcactttgcatttaatttt 5369186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 178 - 342
Target Start/End: Original strand, 3463808 - 3463970
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||| |||||||||||||| |||||||||  | |||| |  ||||||||| ||||| |||||| || ||||||||||||||||| |||||||||||||     
T  3463808 aatcatatttattaagaaaactaaaacatac-agtttgtaacatagttttt-gtgttatctttgaaataagttttataggaagatataaaaacaattttt 3463905  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    |||||   ||| |||| || ||||||||| | |||| |||||||||| | |||||||||||||||    
T  3463906 attggtagttgattatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttt 3463970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 178 - 342
Target Start/End: Original strand, 5736231 - 5736395
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||||||||||||||||||||  | |||| |  |||||||||| |||| |||||| || || |||||||||||| ||||||||||||||||    
T  5736231 aatcacacttattaagaaaattaaaacatagtagtttgtaacatagttttttatgttatctttgaaataaattttataggaagttgtaaaaacaattttc 5736330  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    ||| |   ||| |||  || ||||||||||  |||| |||||||| | | |||||||||||||||    
T  5736331 atttgtcgttgattacagagaaaatgaaagggagagcaaattgaacgcattttgcatttaatttt 5736395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 24439738 - 24439575
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| ||||||| ||| ||||||||| | ||||||   |||| ||||||||||| |  |||||| |||||| || | ||||||||||||||||| ||||    
T  24439738 tcacacttattaaaaaagttaaaacattataatttgagatataattttttgtgttattcttggaataagtttcatggaaagatgtaaaaacaattatcat 24439639  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    |||||| |  ||||||||||||| |||   |||  |||||||||| ||||||||||||||||||    
T  24439638 tggctaattattatggaaaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 24439575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 186 - 342
Target Start/End: Complemental strand, 8506593 - 8506443
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    |||||||||||| |||||||||  | |||| |  ||||||| || |||| || ||| || ||||||||||| ||||||||||||||||||||||||        
T  8506593 ttattaagaaaactaaaacatagtagtttgcaacatagtttcttatgttatccttgaaataagttttatagaaagatgtaaaaacaattttcattg---- 8506498  T
Q  286 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
      |||||| || ||||||||||| |||| |||||||||| | |||||||||||||||    
T  8506497 --ggttattgagaaaatgaaagatagagcaaattgaatgcactttgcatttaatttt 8506443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 244 - 352
Target Start/End: Complemental strand, 7071342 - 7071234
Alignment:
Q  244 aaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    |||||||| || |||| ||||||||| ||||||||||| |||||| ||| ||| |||||| ||||  | ||||||||||||||||||| ||||||||| |    
T  7071342 aaaagtttcatgggaaaatgtaaaaataattttcattgactattgattacggagaaaatggaagagcgtgaaaattgaatgtaatttgtatttaatttca 7071243  T
Q  344 tgagaataa 352  Q
    |||||||||    
T  7071242 tgagaataa 7071234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 321 - 419
Target Start/End: Original strand, 842698 - 842799
Alignment:
Q  321 aatgtaatttgcatttaattttatgagaataacnnnnnnnn---tcttggaaaagataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||||||||||||||||||||||            ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  842698 aatgtaatttgcatttaattttatgagaataataaaaaaaaaaatcttggaaaagataaaagtttatcttttttgcttatattttgggacaaagaaaatg 842797  T
Q  418 tg 419  Q
    ||    
T  842798 tg 842799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 221 - 342
Target Start/End: Complemental strand, 8959767 - 8959646
Alignment:
Q  221 tagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattg 320  Q
    |||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||    ||| |||| || |||||| || | |||| ||||||    
T  8959767 tagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcattgatagttgattatagagaaaatggaaaagagagcaaattg 8959668  T
Q  321 aatgtaatttgcatttaatttt 342  Q
    || | | ||| |||||||||||    
T  8959667 aacgcactttacatttaatttt 8959646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 189 - 258
Target Start/End: Complemental strand, 32019980 - 32019911
Alignment:
Q  189 ttaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatagga 258  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||| || ||||||||    
T  32019980 ttaagaaaactaaaacataagaatttggagtatagttttctgtgttttctttagaaaacgtcttatagga 32019911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 194 - 342
Target Start/End: Original strand, 16153353 - 16153500
Alignment:
Q  194 aaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 293  Q
    |||| |||||||||| | |||| |  ||||||||||||||| |||||| || ||||||||||||||||||||||||| |||||||||||   ||| ||||    
T  16153353 aaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaac-attttcattggtagttgattat 16153451  T
Q  294 ggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
     || ||| ||||| | |||| ||||| |||| | |||| ||||||||||    
T  16153452 agagaaagtgaaaaagagagcaaattaaatgcactttgtatttaatttt 16153500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 31690613 - 31690776
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||||||| || ||   |||||  ||||| ||||||||||| |  ||||||  |||||||||| |||||||||||| |||||||||    
T  31690613 tcacacttattaagaaaattaatacttagtgatttgaggtataattttttgtgttcttcttggaatgagttttatagaaagatgtaaaaataattttcat 31690712  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| ||    ||||||| ||||| |||   |||  |||||||||| ||||||||||||||||||    
T  31690713 tggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 31690776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 302
Target Start/End: Original strand, 30893243 - 30893365
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| |||||||| | ||||||||||||||||| |||||||||  || |||  | |||||| | |||||||||||| |||||| ||    
T  30893243 tcacacttattaagaaaactaaaacatgataatttggagtatagtttcttgtgtttttcttagaattaattttatggaaagatgtaaaaataatttttat 30893342  T
Q  280 tggctattggttatggaaaaaat 302  Q
    ||| |||| ||||| || |||||    
T  30893343 tggttatttgttatagataaaat 30893365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 210 - 341
Target Start/End: Complemental strand, 8146860 - 8146730
Alignment:
Q  210 aatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaa 309  Q
    ||||||||||||||||| ||||||| | | ||||| ||||||||| | || || |||||  |||||||||||| |||  |||||||| ||||||| ||      
T  8146860 aatttggagtatagtttcttgtgttct-tctggaataagttttatggaaaaatttaaaataaattttcattggttatctgttatggagaaaatgagaggg 8146762  T
Q  310 agagaaaattgaatgtaatttgcatttaattt 341  Q
    |||| ||||| | |||||||||||||||||||    
T  8146761 agagcaaattaattgtaatttgcatttaattt 8146730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 370 - 417
Target Start/End: Original strand, 9957631 - 9957678
Alignment:
Q  370 aagataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  9957631 aagataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 9957678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 186 - 341
Target Start/End: Complemental strand, 32079666 - 32079512
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    |||||||||||| |||||||| | |||||||| ||||||||||| |||| || ||| ||  ||||| || | |||||||||||||||||||||| |  ||    
T  32079666 ttattaagaaaactaaaacattataatttggattatagttttttatgttctccttgaaattagtttaatggaaagatgtaaaaacaattttcatcgatta 32079567  T
Q  286 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattt 341  Q
    ||  |||  || ||||||| ||  |||| ||||| |||| ||||||||||||||||    
T  32079566 tttattacagagaaaatgagagggagag-aaattaaatgcaatttgcatttaattt 32079512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 12730103 - 12730145
Alignment:
Q  310 agagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  12730103 agagaaaattgaatgtaatttgcatttaattttatgagaataa 12730145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 8225407 - 8225362
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  8225407 gataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 8225362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 343
Target Start/End: Complemental strand, 12639017 - 12638892
Alignment:
Q  218 gtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaa 317  Q
    ||||| ||||||||||| || |||||| || |||||| | |||||||||||| |||| ||||||| ||    ||||||| ||||| |||  ||||  |||    
T  12639017 gtataattttttgtgttctccttggaataaattttatggaaagatgtaaaaataattctcattggttaaaaattatggagaaaataaaaagaagaacaaa 12638918  T
Q  318 ttgaatgtaatttgcatttaatttta 343  Q
    ||||||| ||||||||||||||||||    
T  12638917 ttgaatgcaatttgcatttaatttta 12638892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 42273593 - 42273548
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  42273593 gataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 42273548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 39505450 - 39505494
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  39505450 ataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 39505494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 417
Target Start/End: Complemental strand, 20643960 - 20643913
Alignment:
Q  370 aagataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||    
T  20643960 aagataaaagtttgtcttttttgcttatattttgggataaagaaaatg 20643913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 1144524 - 1144586
Alignment:
Q  220 atagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 282  Q
    ||||||||||||||| |||||  || || ||||||||||| ||||||||||||||||||||||    
T  1144524 atagttttttgtgttatctttaaaataaattttataggaatatgtaaaaacaattttcattgg 1144586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 373 - 419
Target Start/End: Complemental strand, 25840806 - 25840760
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||    
T  25840806 ataaaagtttgtcatttttgcttatattttgggacaaagaaaatgtg 25840760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 341
Target Start/End: Complemental strand, 6391997 - 6391876
Alignment:
Q  220 atagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaatt 319  Q
    |||||||||||| |  |||||| || |||||| |||| ||||||||||||||| ||| ||||| |||| ||||| || ||||||||||| | || | | |    
T  6391997 atagttttttgtatcatctttgaaataagtttcatagaaagatgtaaaaacaacttttattggttattagttatagagaaaatgaaagagaaagtataat 6391898  T
Q  320 gaatgtaatttgcatttaattt 341  Q
     |||| |||||||| |||||||    
T  6391897 aaatgcaatttgcaattaattt 6391876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 186 - 343
Target Start/End: Complemental strand, 8144094 - 8143937
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    |||||||||||| |||||||||  ||||||  |||||  ||||||| ||||  |||||| |||||| |||| |||| ||||||  |||| ||||||| ||    
T  8144094 ttattaagaaaaataaaacatattaatttgaggtataaatttttgtatttttcttggaataagtttcatagaaagaagtaaaacgaattctcattggtta 8143995  T
Q  286 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
     || ||||||| ||||| |||   |||  |||||||||| |||||  |||||||||||    
T  8143994 atgattatggagaaaataaaatgtagaacaaattgaatgcaatttatatttaatttta 8143937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 417
Target Start/End: Original strand, 12730204 - 12730249
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||    
T  12730204 gataaaagtttgtcttttttacttatattttgggacaaagaaaatg 12730249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 315 - 352
Target Start/End: Original strand, 12792929 - 12792966
Alignment:
Q  315 aaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12792929 aaattgaatgtaatttgcatttaattttatgagaataa 12792966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 218 - 343
Target Start/End: Complemental strand, 13146857 - 13146732
Alignment:
Q  218 gtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaa 317  Q
    ||||| ||||||||||| ||||||||| ||||||||| | |||||||||||| |||| ||||||| ||    ||||||| ||||  |||   |||  |||    
T  13146857 gtataattttttgtgttctctttggaataagttttatggaaagatgtaaaaataattctcattggttaaaaattatggagaaaacaaaaatgagaacaaa 13146758  T
Q  318 ttgaatgtaatttgcatttaatttta 343  Q
    ||||||| ||||| ||||||||||||    
T  13146757 ttgaatgcaatttacatttaatttta 13146732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 342
Target Start/End: Complemental strand, 28907192 - 28907074
Alignment:
Q  224 ttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagaga--aaattga 321  Q
    ||||||||||| |||||| || |||||| |||||| ||||||||||||||||| |||||   ||| || | || ||||||||| |||||||  |||||||    
T  28907192 ttttttgtgttatctttgaaataagttt-ataggaggatgtaaaaacaatttttattggtagttgattctagagaaaatgaaa-aaagagaacaaattga 28907095  T
Q  322 atgtaatttgcatttaatttt 342  Q
    ||| | |||||||||||||||    
T  28907094 atgcactttgcatttaatttt 28907074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 342
Target Start/End: Complemental strand, 28943587 - 28943469
Alignment:
Q  224 ttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagaga--aaattga 321  Q
    ||||||||||| |||||| || |||||| |||||| ||||||||||||||||| |||||   ||| || | || ||||||||| |||||||  |||||||    
T  28943587 ttttttgtgttatctttgaaataagttt-ataggaggatgtaaaaacaatttttattggtagttgattctagagaaaatgaaa-aaagagaacaaattga 28943490  T
Q  322 atgtaatttgcatttaatttt 342  Q
    ||| | |||||||||||||||    
T  28943489 atgcactttgcatttaatttt 28943469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 29307221 - 29307282
Alignment:
Q  221 tagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 282  Q
    |||||||||||||  |||||  || |||||||||||||||||||||||| ||||||||||||    
T  29307221 tagttttttgtgtaatctttaaaataagttttataggaagatgtaaaaataattttcattgg 29307282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 34425274 - 34425229
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||    
T  34425274 gataaaagtttgtcttttttgcttatattttaggacaaagaaaatg 34425229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 251 - 342
Target Start/End: Original strand, 5659584 - 5659676
Alignment:
Q  251 ttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaa-agagaaaattgaatgtaatttgcatttaatttt 342  Q
    |||||||||||||||||||||||||| |||||   ||| |||| |||||||||||| || | || |||||||||| | ||| |||||||||||    
T  5659584 ttataggaagatgtaaaaacaatttttattggtagttgattatagaaaaaatgaaaaaagaaagcaaattgaatgcactttacatttaatttt 5659676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 224 - 308
Target Start/End: Complemental strand, 30703725 - 30703641
Alignment:
Q  224 ttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaaga 308  Q
    ||||||||||| |||||| || || ||||||||||||||||| ||| || ||||||||| ||||| ||||  | |||||||||||    
T  30703725 ttttttgtgttatctttgaaataaattttataggaagatgtataaaaaagtttcattggttattgattattcagaaaatgaaaga 30703641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 16286076 - 16286178
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||||||| || ||   |||||  ||||| ||||||||||| ||||||||| |||||| ||   |||||||||||| |||| ||||    
T  16286076 tcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctctttggaataagtttcatgaaaagatgtaaaaataattctcat 16286175  T
Q  280 tgg 282  Q
    |||    
T  16286176 tgg 16286178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 343
Target Start/End: Original strand, 8146044 - 8146169
Alignment:
Q  218 gtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaa 317  Q
    ||||| ||||||||||| || ||| || |||||| || | |||||||||||| |||| ||||| | ||    ||||||| ||||| ||| | |||  |||    
T  8146044 gtataattttttgtgttctccttgaaataagtttcatggaaagatgtaaaaataattctcattagttaaaaattatggagaaaataaaaaagagaacaaa 8146143  T
Q  318 ttgaatgtaatttgcatttaatttta 343  Q
    ||||||| ||||||||||||||||||    
T  8146144 ttgaatgcaatttgcatttaatttta 8146169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 372 - 417
Target Start/End: Original strand, 12793024 - 12793069
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||| ||||||||||||||||||| |||| |||||||    
T  12793024 gataaaagtttgtattttttgcttatattttggaacaaagaaaatg 12793069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 408
Target Start/End: Original strand, 104437 - 104473
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggaca 408  Q
    |||||||||||||||||||| ||||||||||||||||    
T  104437 gataaaagtttgtcttttttacttatattttgggaca 104473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 414
Target Start/End: Complemental strand, 7071184 - 7071140
Alignment:
Q  370 aagataaaagtttgtcttttttgcttatattttgggacaacgaaa 414  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||    
T  7071184 aagataaaagtttgtctttttcgcttatattttggtacaaagaaa 7071140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 16286281 - 16286325
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||||||||| ||||||||||| ||||| |||||||    
T  16286281 ataaaagtttgtcttttttacttatattttgagacaaagaaaatg 16286325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 282
Target Start/End: Complemental strand, 18718741 - 18718645
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 282  Q
    |||||||||||||||||| |||  | |||  | |||||||| ||||||| || ||| || |||||||||||  |||||||||| ||||||| |||||    
T  18718741 ttattaagaaaattaaaatatagtagtttataatatagtttattgtgttatccttgaaataagttttatagatagatgtaaaagcaattttaattgg 18718645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 25962650 - 25962694
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||||| |||||||||||||||||| ||||| |||||||    
T  25962650 ataaaagtttgtattttttgcttatattttgagacaaagaaaatg 25962694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 344
Target Start/End: Original strand, 29493525 - 29493669
Alignment:
Q  200 aaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaa 299  Q
    ||||||||| |||||||||||||| |||||||||| |  |  |||  ||||| | |  || | ||| |||||||||| ||||  ||||||||||||| ||    
T  29493525 aaaacataataatttggagtatagctttttgtgttctgctctgaattagtttcacacaaataagtataaacaatttttattgattattggttatggagaa 29493624  T
Q  300 aatgaaagaaagagaaaattgaatgtaatttgcatttaattttat 344  Q
    |||   ||| || | ||||||||| ||||||||||| ||||||||    
T  29493625 aataggagagagtgtaaattgaatataatttgcattcaattttat 29493669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 35462916 - 35462960
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||| ||||||||||||||||||||| ||||| |||||||    
T  35462916 ataaaagttggtcttttttgcttatattttgagacaaagaaaatg 35462960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 352
Target Start/End: Original strand, 446000 - 446054
Alignment:
Q  298 aaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||| ||| ||||||||||| ||||| |||||||||| |||| |||||    
T  446000 aaaatgaaagagagaaaaaattgaatgcaattttcatttaatttcatgataataa 446054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 352
Target Start/End: Complemental strand, 1238596 - 1238522
Alignment:
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||| ||||||||||| || ||||||   || | ||||||||||||||||||||  ||||||||||| |||||||    
T  1238596 attgcctattggttatagagaaaatgggggagaaagaaaattgaatgtaatttgtttttaattttataagaataa 1238522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 17351325 - 17351279
Alignment:
Q  372 gataaaagtttgtcttttttgctta-tattttgggacaacgaaaatg 417  Q
    |||||||||||||||||||||||||  |||||||||||| |||||||    
T  17351325 gataaaagtttgtcttttttgcttacaattttgggacaaagaaaatg 17351279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 352
Target Start/End: Complemental strand, 23233429 - 23233395
Alignment:
Q  318 ttgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||||||||||||||| ||||||||||||||    
T  23233429 ttgaatgtaatttgcatttatttttatgagaataa 23233395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 24432393 - 24432495
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| ||| || ||   |||||  ||||| ||||||||||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  24432393 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 24432492  T
Q  280 tgg 282  Q
    |||    
T  24432493 tgg 24432495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 25962441 - 25962543
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| ||| || ||   |||||  ||||| ||||||||||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  25962441 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 25962540  T
Q  280 tgg 282  Q
    |||    
T  25962541 tgg 25962543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 31316794 - 31316896
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| ||| || ||   |||||  ||||| ||||||||||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  31316794 tcacagttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 31316893  T
Q  280 tgg 282  Q
    |||    
T  31316894 tgg 31316896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 409
Target Start/End: Complemental strand, 6391832 - 6391795
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  6391832 gataaaagttagtcttttttgcttataatttgggacaa 6391795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 409
Target Start/End: Original strand, 16153543 - 16153580
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  16153543 gataaaagtttgtcttttttgcttatcatttgggacaa 16153580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 409
Target Start/End: Complemental strand, 20039046 - 20039009
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||||||||||||| ||||||||||||| ||||||||    
T  20039046 gataaaagtttgtctgttttgcttatattgtgggacaa 20039009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 409
Target Start/End: Complemental strand, 32017649 - 32017612
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  32017649 gataaaagtttgtcgtttttgcttgtattttgggacaa 32017612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 32110946 - 32110901
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||| |||||||||||||||||||||||| ||| || |||||||    
T  32110946 gataaatgtttgtcttttttgcttatattttaggataaagaaaatg 32110901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 343
Target Start/End: Original strand, 17825326 - 17825354
Alignment:
Q  315 aaattgaatgtaatttgcatttaatttta 343  Q
    |||||||||||||||||||||||||||||    
T  17825326 aaattgaatgtaatttgcatttaatttta 17825354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 24439533 - 24439489
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||  |||||||||||||||||||| ||||| |||||||    
T  24439533 ataaaagttgatcttttttgcttatattttgcgacaaagaaaatg 24439489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 409
Target Start/End: Complemental strand, 32433616 - 32433580
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    |||||| |||||||||||||||||||||||| |||||    
T  32433616 ataaaaatttgtcttttttgcttatattttgagacaa 32433580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 38130334 - 38130378
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||| ||| |||||||| ||||||||||||||||| |||||||    
T  38130334 ataaaaatttatcttttttacttatattttgggacaaagaaaatg 38130378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 409
Target Start/End: Complemental strand, 42365000 - 42364964
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  42365000 ataaaagttggtcttttttgcttatattttgagacaa 42364964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 183; Significance: 8e-99; HSPs: 97)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 178 - 419
Target Start/End: Original strand, 7022395 - 7022637
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||    
T  7022395 aatcacatttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatataaaaataattttc 7022494  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac-nnnnnnnntcttggaaaagataa 376  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||| |||||||||    
T  7022495 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaatcttgaaaaagataa 7022594  T
Q  377 aagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  7022595 aagtttgtcttttttgcttatattttgggacaaagaaaatgtg 7022637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 178 - 419
Target Start/End: Complemental strand, 7858696 - 7858454
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  7858696 aatcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttatttgaaaaaagttttataggaagatgtaaaaacaattttc 7858597  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaat-aacnnnnnnnntcttggaaaagataa 376  Q
    |||| | |||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||        |||||||||||||||    
T  7858596 attgaccattgattatggaaaaaatgaaagagagagaaaattgaaagtaatttgcatttaattttatgagaataaacaaaaaaaatcttggaaaagataa 7858497  T
Q  377 aagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  7858496 aagtttgtcttttttgcttatattttgggacaaagaaaatgtg 7858454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 34890166 - 34890340
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34890166 aatcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 34890265  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  34890266 attggctattggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataa 34890340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 178 - 418
Target Start/End: Complemental strand, 26483700 - 26483460
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  26483700 aatcacacttattaagaaaactaaaacataagaatttgaagtatagttttttgtgttttctttgaaaaaagttttatagggagatgtaaaaacaattttc 26483601  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac-nnnnnnnntcttggaaaagataa 376  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||         ||||| |||| ||||    
T  26483600 attggctattgattatggaaaaaatgaaagaaagagaaaattgaatgtaatttacatttaattttacgagaataacaaaaaaaaatcttgaaaaaaataa 26483501  T
Q  377 aagtttgtcttttttgcttatattttgggacaacgaaaatgt 418  Q
    |||||||| |||||| |||||||||||| |||| ||||||||    
T  26483500 aagtttgtgtttttt-cttatattttggtacaaagaaaatgt 26483460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 36190940 - 36190766
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| || ||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  36190940 aatcacacttgttaagaaaactaaaacataagaatttagagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttc 36190841  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  36190840 attggctattggttatggaaaaaataaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataa 36190766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 43216339 - 43216513
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  43216339 aatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttc 43216438  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||  |||||||||||||| ||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||    
T  43216439 attcactattggttatggagaaaatgaaagagagataaaattaaatgtaatttgcatttaattttatgagaataa 43216513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 178 - 419
Target Start/End: Original strand, 41086378 - 41086621
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||| |||||||||||||| ||||  |||| |||||| | ||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||    
T  41086378 aatcatatttattaagaaaactaaataataaaaatttgaattatagttttttgtgttttctttgaaaaaagttttatataaagatgtaaaaacaattttc 41086477  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaat-aacnnnnnnnntcttggaaaagataa 376  Q
    ||||||||||||| ||||||||||| ||| | |||||||||| |||||||||||||||||||||||||||||| |||        ||||| |||||||||    
T  41086478 attggctattggtaatggaaaaaataaaacagagagaaaattcaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcttgaaaaagataa 41086577  T
Q  377 aagtttgtc-ttttttgcttatattttgggacaacgaaaatgtg 419  Q
    ||||||||| |||||||||||||||||||||||| |||||||||    
T  41086578 aagtttgtctttttttgcttatattttgggacaaagaaaatgtg 41086621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 187 - 352
Target Start/End: Complemental strand, 28348769 - 28348605
Alignment:
Q  187 tattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctat 286  Q
    ||||| |||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  28348769 tattacgaaaataaaaacataagaatttggagtatagtattttgtattttctttggaaaaagttttataggaatatgtaaaaacaatttccattggctat 28348670  T
Q  287 tggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  28348669 tggttatgga-aaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataa 28348605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 34158282 - 34158457
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaa-agttttataggaagatgtaaaaacaatttt 276  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  34158282 aatcacatttattaagaaaattaaaacataagaatctggagtatagtttgttgtgttttctttaaaaaaaagttttataggaagatgtaaaaacaatttt 34158381  T
Q  277 cattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||| |||||||||||| ||||||  ||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  34158382 cattgactattggttatgaaaaaaacaaaagagagagaaaattgaatgtaatttgcatttaattttatgataataa 34158457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 206 - 352
Target Start/End: Complemental strand, 31734255 - 31734109
Alignment:
Q  206 taagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaa 305  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  31734255 taagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggatatggaaaaaatgaa 31734156  T
Q  306 agaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||| |||||||||||||||||||||||||||||||| ||||||||||    
T  31734155 agagagagaaaattgaatgtaatttgcatttaatttgatgagaataa 31734109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 181 - 352
Target Start/End: Complemental strand, 24893006 - 24892832
Alignment:
Q  181 cacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaa---aaacaattttc 277  Q
    |||| |||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||| |||   |||||||||||    
T  24893006 cacacttattaagaaaacttaaacataagaatttagagtatagttttttgtgttttctttggaaaacgttttataggaggatataataaaaacaattttc 24892907  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  24892906 attggctattggttatggaaaaaatgaaagagatagaaaattgaatgtaatttgcatttaattttatgagaataa 24892832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 179 - 352
Target Start/End: Complemental strand, 8712039 - 8711870
Alignment:
Q  179 atcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttca 278  Q
    |||||| ||||||| |||| |||||||||    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  8712039 atcacacttattaaaaaaactaaaacata----tttggagtatagttttttgtgtttt-tttggaaaaagttttataggaagatgtaaaaataattttca 8711945  T
Q  279 ttggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaa-ttttatgagaataa 352  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  8711944 ttggctattggttatggaaaaaattaaagagagagaaaattgaatgtaatttgcatttaatttttatgagaataa 8711870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 182 - 352
Target Start/End: Original strand, 8107613 - 8107783
Alignment:
Q  182 acatttattaagaaaattaaaacataagaatttggagtatagtttttt-gtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 280  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||| || ||||||||| ||||||||||| |  | |||||||||||||||||||||    
T  8107613 acatttattaaaaaaattaaaatataagaatttggagtatagtttttttgtattttctttgaaaaaagttttacaatatgatgtaaaaacaattttcatt 8107712  T
Q  281 ggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8107713 ggctattggttatggataaa-tgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataa 8107783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 194 - 352
Target Start/End: Original strand, 15957919 - 15958079
Alignment:
Q  194 aaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 293  Q
    |||| ||||| ||||||| |||||||||||||| |||||||||||||| ||||||||||||||||| | |||||||||||||||||| ||||||||||||    
T  15957919 aaaactaaaatataagaaattggagtatagtttattgtgttttctttgaaaaaagttttataggaataagtaaaaacaattttcatttgctattggttat 15958018  T
Q  294 ggaaaaaatgaa--agaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||    
T  15958019 ggaaaaaatgaaagagagagagaaaattgaatgtaatttgcatttaattttatgagaataa 15958079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 178 - 338
Target Start/End: Original strand, 30575826 - 30575987
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagtttt-ataggaagatgtaaaaacaatttt 276  Q
    ||||||| |||||||||||| |||||||||| ||||||||||| |||||||||||||||||||  |||||||||| | ||||| ||||||||||||||||    
T  30575826 aatcacacttattaagaaaactaaaacataaaaatttggagtaaagttttttgtgttttctttaaaaaaagtttttacaggaaaatgtaaaaacaatttt 30575925  T
Q  277 cattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaa 338  Q
    |||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||    
T  30575926 cattggctattggttatggaaaaaatgaaagagagagaaaattaaaagtaatttgcatttaa 30575987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 206 - 352
Target Start/End: Complemental strand, 13143904 - 13143758
Alignment:
Q  206 taagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaa 305  Q
    |||||||||| |||||| |||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||| |||||| ||| |||||||||    
T  13143904 taagaatttgaagtataattttttgtgttttcgttgaaaaaagtttcataggaagatgtaaaaacaattttcattggctgttggttgtgggaaaaatgaa 13143805  T
Q  306 agaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||| ||| |||||||||||||||||||||||||||||||||||||||    
T  13143804 agagagaaaaaattgaatgtaatttgcatttaattttatgagaataa 13143758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 199 - 352
Target Start/End: Original strand, 35456038 - 35456190
Alignment:
Q  199 taaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaa 298  Q
    ||||||||||||||||| ||||||||||||| |||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||  |||||||||    
T  35456038 taaaacataagaatttgaagtatagttttttatgttttttttg-aaaaagttttatagaaagatgtaaaaacaattttcattggctattaattatggaaa 35456136  T
Q  299 aaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||| ||||| |||||||| |||||||||||| |||||||||||||||||||||    
T  35456137 aaataaaagagagagaaaaatgaatgtaatttacatttaattttatgagaataa 35456190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 29920260 - 29920434
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| ||||||||||||||||| |||| | ||||||||||| ||||||||| |||||| || ||||||||||||||||||||||    
T  29920260 aatcacacttattaagaaaactaaaacataagaatttgaagtacaattttttgtgttatctttggaataagtttcatgggaagatgtaaaaacaattttc 29920359  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||| ||||||| |||||  |||| || ||||||||||||||||| | ||||||||| ||||||||||    
T  29920360 attggctattgattatggacaaaatagaagagagggaaaattgaatgtaattggtatttaatttcatgagaataa 29920434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 178 - 314
Target Start/End: Original strand, 13143937 - 13144073
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttg-gaaaaagttttataggaagatgtaaaaacaatttt 276  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  13143937 aatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaaagttttataggaagatgtaaaaacaatttt 13144036  T
Q  277 cattggctattggttatggaaaaaatgaaagaaagaga 314  Q
    |||| | |||||||||||| |||||||||||| |||||    
T  13144037 cattagttattggttatgg-aaaaatgaaagagagaga 13144073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 4046885 - 4047060
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttt-tgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 276  Q
    ||||||| |||||||||||||||||  ||||||||||| || ||||||||| ||||||||||||  || |||||| || | || ||||||||| ||||||    
T  4046885 aatcacacttattaagaaaattaaagtataagaatttgtagcatagtttttgtgtgttttctttataataagtttcatggaaatatgtaaaaataatttt 4046984  T
Q  277 cattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||| |||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||| ||||||||||    
T  4046985 cattggcaattggttatggaaaaaataaaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataa 4047060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 8709778 - 8709950
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| || |||| | || |||||| ||||||||| |||||    
T  8709778 aatcacacttaataaaaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaataagtctcatgggaagaagtaaaaacatttttc 8709877  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||| ||||  |||||||| |||||  |||  |||||||||||||||||||||||||||||||||||||||||||    
T  8709878 attgactatatgttatggagaaaatagaag--agagaaaattgaatgtaatttgcatttaattttatgagaataa 8709950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 194 - 330
Target Start/End: Complemental strand, 35525737 - 35525603
Alignment:
Q  194 aaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 293  Q
    |||| |||||||||||||||| ||||||||||||  |||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  35525737 aaaactaaaacataagaatttagagtatagtttt--gtgttttctttgaaaaaagttttacaggaagatgtaaaaacaattttcattgactattggttat 35525640  T
Q  294 ggaaaaaatgaaagaaagagaaaattgaatgtaattt 330  Q
    ||||||||| ||||| |||||||||| ||||||||||    
T  35525639 ggaaaaaataaaagagagagaaaatttaatgtaattt 35525603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 15824629 - 15824797
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    |||| |||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||| ||| |||||| || | ||||||||||||||          
T  15824629 aatcgcatttagtaagaaaactaaaacataagaatttgaagtatagttttttgtgttttctttagaataagtttcatggaaagatgtaaaaaca------ 15824722  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||||| |||||||| |||| |||||||||| |||||||||| |||||||||| ||||||||||    
T  15824723 attggctattggttatgaaaaaaatggaagagagagaaaatttaatgtaattttcatttaatttcatgagaataa 15824797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 7499883 - 7499720
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    |||||||||||||||||||| ||||||||| |||||| |||||||  |||||| |||||||||| ||            |||||||||||||||||||||    
T  7499883 aatcacatttattaagaaaactaaaacataggaatttagagtataactttttgcgttttctttgaaa------------gaagatgtaaaaacaattttc 7499796  T
Q  278 attggctattggttatggaaaaaa-tgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  7499795 attggctattggttatggaaaaaaatgaaagagagagaaaattgaatgtaatttacatttaattttatgagaataa 7499720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 178 - 315
Target Start/End: Original strand, 16358104 - 16358240
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||||||||| |||| |||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  16358104 aatcacacttattaagaaaattaaaatataaaaatttgaagtatagttttttttgttttctttg-aaaaagtttcataggaagatgtaaaatcaattttc 16358202  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaa 315  Q
    |||| |||||| ||||| ||||||||||||| ||||||    
T  16358203 attgactattgattatgaaaaaaatgaaagagagagaa 16358240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 194 - 352
Target Start/End: Original strand, 16879400 - 16879558
Alignment:
Q  194 aaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 293  Q
    |||| ||||| ||||||||||| |||||| |||||||||||||||||| || || ||| || |||| |||||||||||||||| |||| |||||| ||||    
T  16879400 aaaactaaaatataagaatttgaagtataattttttgtgttttctttgaaataaatttcatgggaatatgtaaaaacaatttttattgactattgattat 16879499  T
Q  294 ggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||  ||||||||||| ||||||||||||||||| |||| ||||||||| || |||||||    
T  16879500 ggtgaaaatgaaagagagagaaaattgaatgtagtttgtatttaatttcataagaataa 16879558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 255 - 347
Target Start/End: Original strand, 3642039 - 3642130
Alignment:
Q  255 aggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgag 347  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  3642039 aggaagatgtaaaaacaatttt-attggctattggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcattttattttatgag 3642130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 178 - 342
Target Start/End: Complemental strand, 17713391 - 17713227
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||||| |||| |||||||||  | |||| |  ||||||| ||||||| || ||| || ||||||||||||||||| ||||||||||||||    
T  17713391 aatcacacttattaaaaaaactaaaacatagtattttgcaacatagtttcttgtgttatccttgaaataagttttataggaagatttaaaaacaattttc 17713292  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    ||||| |||||||||| ||||||||| |||| |||| | |||||||| | |||||||||||||||    
T  17713291 attggttattggttattgaaaaaatggaagagagagcacattgaatgcactttgcatttaatttt 17713227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 243 - 352
Target Start/End: Complemental strand, 2052937 - 2052830
Alignment:
Q  243 aaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| || ||| |||||  |||  ||||||||||||||||||||||||||||||||     
T  2052937 aaaaagttttatgggaagatgtaaaaacaattttcattggctattggctagggagaaaatagaag--agagaaaattgaatgtaatttgcatttaatttc 2052840  T
Q  343 atgagaataa 352  Q
    ||||||||||    
T  2052839 atgagaataa 2052830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 181 - 342
Target Start/End: Original strand, 41362302 - 41362463
Alignment:
Q  181 cacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 280  Q
    ||||||||||||||||| |||||||||  | |||| |  ||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||    
T  41362302 cacatttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcatt 41362401  T
Q  281 ggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    ||   ||| |||| || ||||||||| |  ||| ||||| |||| | |||||||||||||||    
T  41362402 ggtagttgattatagagaaaatgaaaaagtgagcaaattaaatgcactttgcatttaatttt 41362463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 220 - 342
Target Start/End: Complemental strand, 8673507 - 8673385
Alignment:
Q  220 atagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaatt 319  Q
    ||||||||||||||| | |||| || |||||||||| ||||||||||||||||||||||||||   ||| |||| || ||||||||| | |||| |||||    
T  8673507 atagttttttgtgttatatttgaaataagttttataagaagatgtaaaaacaattttcattggtagttgattatagagaaaatgaaaaagagagcaaatt 8673408  T
Q  320 gaatgtaatttgcatttaatttt 342  Q
    ||||||| |||||||||||||||    
T  8673407 gaatgtactttgcatttaatttt 8673385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 178 - 340
Target Start/End: Complemental strand, 38072331 - 38072169
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    |||||||||||||||||||| |||||||||  | |||| |  ||||||||||||||| |||||| |  ||||||||||  || |||||||||||||||||    
T  38072331 aatcacatttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttgaattaagttttataaaaaaatgtaaaaacaattttc 38072232  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatt 340  Q
    |||||   ||| |||| || ||||||||| |||||| |||||||||| | |||| ||||||||    
T  38072231 attggtagttgattatagagaaaatgaaaaaaagagcaaattgaatgcactttgtatttaatt 38072169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 178 - 350
Target Start/End: Original strand, 44663784 - 44663953
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| ||||  |||||||||| |||||||||||   ||||||||||||||| || |||||| | |||||||||||| ||||||     
T  44663784 aatcacacttattaagaaaactaaattataagaatttagagtatagttt---gtgttttctttggaataaattttatggaaagatgtaaaaataattttt 44663880  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaat 350  Q
    ||||||||||| ||| ||| ||||||||| |  || ||| |||||| | |||||| |||||||| | ||||||    
T  44663881 attggctattgattagggacaaaatgaaaaacggataaagttgaatatgatttgcgtttaatttcacgagaat 44663953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 182 - 342
Target Start/End: Complemental strand, 8745747 - 8745587
Alignment:
Q  182 acatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 281  Q
    |||||||||||||||| |||||||||  | |||| |  ||||||| ||||||| |  ||| || ||||||||||||||||||||||||||||||||||||    
T  8745747 acatttattaagaaaactaaaacatagtagtttgcaacatagtttcttgtgttattcttgaaataagttttataggaagatgtaaaaacaattttcattg 8745648  T
Q  282 gctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    | | ||| |||| |||||||| ||||  |||| ||||| ||  || |||||||||||||||    
T  8745647 gttgttgattatagaaaaaataaaagggagagcaaattaaaaatagtttgcatttaatttt 8745587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 235 - 342
Target Start/End: Original strand, 26954441 - 26954548
Alignment:
Q  235 ttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcat 334  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||| | |||||||| || ||||||||||| | || ||| |||||| | |||||||    
T  26954441 ttctttgaaataagttttataggaagatgtaaaaacaattttcattggttgttggttattgagaaaatgaaagagaaagcaaaatgaatgcactttgcat 26954540  T
Q  335 ttaatttt 342  Q
    ||||||||    
T  26954541 ttaatttt 26954548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 180 - 342
Target Start/End: Original strand, 2628158 - 2628320
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| ||||||||||||  ||||||||  | |||| |  ||||||| ||||||| || ||  || |||||||||||||||||||||||| |||||||||    
T  2628158 tcacacttattaagaaaaccaaaacatagtagtttgcaacatagtttcttgtgttatccttaaaataagttttataggaagatgtaaaaataattttcat 2628257  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    ||| ||||| |||| || ||||||||||| |||| |||||||||  | |||||||| ||||||    
T  2628258 tggttattgcttattgagaaaatgaaagagagagcaaattgaattcactttgcattaaatttt 2628320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 178 - 342
Target Start/End: Complemental strand, 17336910 - 17336746
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| ||||| |||  | |||| |  ||||||||||||||  |||||| || || |||||||||||||||||||||||||||||    
T  17336910 aatcacacttattaagaaaactaaaatatagtagtttgtaacatagttttttgtgtcatctttgaaataaattttataggaagatgtaaaaacaattttc 17336811  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    |||||   ||| |||| ||  ||||||||   |||| |||||||||| | |||||||||||||||    
T  17336810 attggtagttgattatagagtaaatgaaaaggagagcaaattgaatgcactttgcatttaatttt 17336746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 224 - 342
Target Start/End: Original strand, 25195085 - 25195202
Alignment:
Q  224 ttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaat 323  Q
    ||||||||||| |||||| || || ||||||||||||||||||||||||||||||||||   ||| |||| || ||||||||| | |||| |||||||||    
T  25195085 ttttttgtgttatctttgaaataa-ttttataggaagatgtaaaaacaattttcattggtggttgattatagagaaaatgaaaaagagagcaaattgaat 25195183  T
Q  324 gtaatttgcatttaatttt 342  Q
    | | |||||||||||||||    
T  25195184 gcactttgcatttaatttt 25195202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 180 - 293
Target Start/End: Complemental strand, 8712690 - 8712577
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    |||||||||||||||||| |||||||||  || ||| ||| |||||| ||||||| |  |||||| ||||||||||| ||||||||||||||||||| ||    
T  8712690 tcacatttattaagaaaactaaaacatagtaacttgcagtttagtttcttgtgttattattggaataagttttatagaaagatgtaaaaacaatttttat 8712591  T
Q  280 tggctattggttat 293  Q
    ||| |||| |||||    
T  8712590 tggttattagttat 8712577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 178 - 342
Target Start/End: Original strand, 4038874 - 4039037
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||||| ||||||||||||||  | |||| |  ||||||||| ||||| | |||| || |||||||||| |||||||||||||||||||||    
T  4038874 aatcacacttattaaaaaaattaaaacatagtagtttgtaacatagttttt-gtgttatttttgaaataagttttatatgaagatgtaaaaacaattttc 4038972  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    ||| |   ||| |||| || ||||||||| | |||| |||||||||| | ||| |||||||||||    
T  4038973 atttgtagttgattatagagaaaatgaaaaagagagcaaattgaatgcactttacatttaatttt 4039037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 33563499 - 33563681
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttgg----aaaaagttttataggaagatgtaaaaacaat 273  Q
    |||||||||||||||||||||||||||||||||||||  | |||   ||||||| |||| |||      || ||||||||| ||||||||||||||||||    
T  33563499 aatcacatttattaagaaaattaaaacataagaatttaaaatattactttttgtatttttttttttttaaataagttttatgggaagatgtaaaaacaat 33563598  T
Q  274 tttcattggc--tattggttatggaaaaaatg--aaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||| |  | ||||||||| | ||||||   |||| |||| | |||||||||||||| | |||||||| ||||||||||    
T  33563599 tttcattgaccattttggttatgcagaaaatggagaagagagaggagattgaatgtaatttacgtttaatttcatgagaataa 33563681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 231 - 352
Target Start/End: Complemental strand, 41756041 - 41755920
Alignment:
Q  231 tgttttctttggaaa-aagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatt 329  Q
    |||||||||| |||| || |||||||| || ||||||||| ||| |||||||  ||||| ||||||||||| ||||||| ||| ||||||||||||||||    
T  41756041 tgttttcttttgaaataaattttatagaaaaatgtaaaaataatgttcattgattattgcttatggaaaaa-tgaaagagagaaaaaattgaatgtaatt 41755943  T
Q  330 tgcatttaattttatgagaataa 352  Q
    | |||||||||| |||| |||||    
T  41755942 tacatttaatttcatgataataa 41755920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 2053031 - 2052947
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagat 262  Q
    ||||||| |||||||||||| |||||||||| |||| | |||||| ||||||||||||||||| ||| ||||||||| |||||||    
T  2053031 aatcacacttattaagaaaactaaaacataataattagaagtataattttttgtgttttctttagaataagttttatgggaagat 2052947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 181 - 301
Target Start/End: Original strand, 28497133 - 28497253
Alignment:
Q  181 cacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 280  Q
    |||||||||||||||||| |||| |||  | |||| |  ||||||| ||||||| || ||| || ||||||||| |||||||||||||||||||||||||    
T  28497133 cacatttattaagaaaataaaaatatagtagtttgcaacatagtttcttgtgttatccttgaaataagttttatgggaagatgtaaaaacaattttcatt 28497232  T
Q  281 ggctattggttatggaaaaaa 301  Q
       |||||||||| |||||||    
T  28497233 acttattggttattgaaaaaa 28497253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 178 - 341
Target Start/End: Complemental strand, 5217559 - 5217397
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| || |||||| | | ||| ||  |||||| ||||||| || ||| || |||||| |||| |||||||||||||||||||     
T  5217559 aatcacacttattaagaaaactataacata-gtagttgcagcgtagtttcttgtgttatccttgaaataagtttcatagaaagatgtaaaaacaattttt 5217461  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattt 341  Q
    ||||| |||| ||||| || ||||||||||| | || | | |||||| || |||||||||||||    
T  5217460 attggttattagttatagagaaaatgaaagagaaagcataatgaatgcaaattgcatttaattt 5217397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 3100120 - 3099957
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| ||| || |||  |||||  ||||| ||||||||||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  3100120 tcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtgttctcgttggaataagtttcatggaaagatgtaaaaataattctcat 3100021  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| ||    ||||||| ||||| |||   |||  |||||||||| ||||||||||||||||||    
T  3100020 tggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 3099957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 34713695 - 34713532
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    |||||||||||||||||| ||| || ||   |||||  ||||| |||||||||||||  ||| || ||||||| ||| |||||||||||| |||| ||||    
T  34713695 tcacatttattaagaaaactaatacttagtgatttgaggtataattttttgtgtttttcttgaaataagttttctagaaagatgtaaaaataattctcat 34713596  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| ||    ||||||| ||||| |||   |||  |||||||||| ||||||||||||||||||    
T  34713595 tggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 34713532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 370 - 417
Target Start/End: Original strand, 34890390 - 34890437
Alignment:
Q  370 aagataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  34890390 aagataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 34890437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 4480911 - 4480841
Alignment:
Q  210 aatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 280  Q
    |||||||||||||| |||||||||| |||||  || ||||||||| |||||||||||||| ||||||||||    
T  4480911 aatttggagtataggtttttgtgttatctttaaaataagttttattggaagatgtaaaaataattttcatt 4480841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 4047113 - 4047157
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  4047113 ataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 4047157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 342
Target Start/End: Complemental strand, 27819759 - 27819663
Alignment:
Q  246 aagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    ||||||||||  |||||||||||||| |||| ||||  |||||||||| || ||||| ||||  |||| ||||| |||||| |||||||||||||||    
T  27819759 aagttttatataaagatgtaaaaacattttttattgattattggttatagagaaaataaaagggagagcaaattaaatgtagtttgcatttaatttt 27819663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 227 - 343
Target Start/End: Complemental strand, 39187353 - 39187237
Alignment:
Q  227 tttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgta 326  Q
    |||||||| || |||||| ||||||||| | |||||||||||| |||||||||||| ||    ||||||| ||||| |||   |||  |||||||||| |    
T  39187353 tttgtgttctcgttggaataagttttatggaaagatgtaaaaataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgca 39187254  T
Q  327 atttgcatttaatttta 343  Q
    |||||||||||||||||    
T  39187253 atttgcatttaatttta 39187237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 27621297 - 27621134
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| ||| || ||   ||||| |||||| ||||||||||| |  |||||| |||||| || | |||||||||||| |||| ||||    
T  27621297 tcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtgttctacttggaataagtttcatggaaagatgtaaaaataattctcat 27621198  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| ||    ||||||| ||||| |||   |||  |||||||||| ||||||||||||||||||    
T  27621197 tggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 27621134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 31133023 - 31133186
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| ||| || ||   |||||  ||||| ||||||||||| || |||||| || ||| || | |||||||||||| |||| ||||    
T  31133023 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataaatttcatggaaagatgtaaaaataattctcat 31133122  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| ||    ||||||| ||||| |||   ||| ||||||||||| ||||||||||||||||||    
T  31133123 tggttaaaaattatggagaaaataaaaaggagaaaaaattgaatgcaatttgcatttaatttta 31133186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 343
Target Start/End: Complemental strand, 34900090 - 34899928
Alignment:
Q  181 cacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 280  Q
    |||| |||||||||||| |||||||||| ||||||   |||| |||||||||||    || ||| ||||||||||||| ||| |||||| |||||| |||    
T  34900090 cacacttattaagaaaactaaaacataataatttgcgatatatttttttgtgttcctcttagaataagttttataggaggatttaaaaataattttgatt 34899991  T
Q  281 ggctattggttatggaaaaaat-gaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    || ||||| | ||||| ||| |  ||||||| |  |||||||||| |||| |||||||||||||    
T  34899990 ggttattgatcatggagaaagtataaagaaa-aacaaattgaatgaaattagcatttaatttta 34899928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 13144085 - 13144127
Alignment:
Q  310 agagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  13144085 agagaaaattgaatgtaatttgcatttaattttatgaaaataa 13144127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 40773397 - 40773499
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||||||||||| |||| ||||| |||| ||||||||||||| |||| ||||||||  |  ||| ||||||||   ||||||||||||| |||||| ||    
T  40773397 tcacatttattaaaaaaactaaaatataacaatttggagtataattttgtgtgtttttctaagaataagttttaacagaagatgtaaaaataatttttat 40773496  T
Q  280 tgg 282  Q
    |||    
T  40773497 tgg 40773499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 13143706 - 13143661
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||    
T  13143706 gataaaagtttatcttttttgcttatattttgggacaaagaaaatg 13143661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 417
Target Start/End: Original strand, 13144179 - 13144224
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||    
T  13144179 gataaaagtttgtcttttttgcttatattttgagacaaagaaaatg 13144224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 247 - 342
Target Start/End: Original strand, 14576213 - 14576301
Alignment:
Q  247 agttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    |||||||||| |||||||||||| |||||||||||| |||||       | ||||||||||| |||| |||||||||| | |||||||||||||||    
T  14576213 agttttatagaaagatgtaaaaataattttcattggttattg-------agaaaatgaaagagagagcaaattgaatgcactttgcatttaatttt 14576301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 226 - 339
Target Start/End: Original strand, 24510735 - 24510848
Alignment:
Q  226 ttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgt 325  Q
    |||||||||||  |||||| |||||| || | ||||||||||||||||||| ||||| || || ||||||| | ||| |||   |||  ||||||||||     
T  24510735 ttttgtgtttttattggaataagtttcatggaaagatgtaaaaacaatttttattggttaatgattatggatagaataaaaagtagaacaaattgaatgc 24510834  T
Q  326 aatttgcatttaat 339  Q
    ||||||||||||||    
T  24510835 aatttgcatttaat 24510848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 24892780 - 24892735
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||    
T  24892780 gataaaagtttgtcttttttgcttatattttggaacaaagaaaatg 24892735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 35525540 - 35525495
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||    
T  35525540 gataaaagtttgtcttttttacttatattttgggacaaagaaaatg 35525495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 36190713 - 36190668
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||    
T  36190713 gataaaagtgtgtcttttttgcttatattttgggacaaagaaaatg 36190668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 218 - 343
Target Start/End: Complemental strand, 44052750 - 44052625
Alignment:
Q  218 gtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaa 317  Q
    ||||| ||||||||||| || |||||| ||||||| | | |||||||||||| |||| ||||||| ||    ||||||| ||||| |||   |||  |||    
T  44052750 gtataattttttgtgttctccttggaataagttttctggaaagatgtaaaaataattctcattggttaaaaattatggagaaaataaaaaggagaacaaa 44052651  T
Q  318 ttgaatgtaatttgcatttaatttta 343  Q
    ||||||| ||||||||||||||||||    
T  44052650 ttgaatgcaatttgcatttaatttta 44052625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 337
Target Start/End: Complemental strand, 7670813 - 7670749
Alignment:
Q  273 ttttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcattta 337  Q
    |||||||| |||||| |||||||| |||||| || | ||||||||||||||||||||| ||||||    
T  7670813 ttttcatttgctattagttatggagaaaatggaatagagagaaaattgaatgtaattttcattta 7670749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 342
Target Start/End: Complemental strand, 17314990 - 17314834
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    |||||||||||| |||||||||  | |||| |  |||| |||||||||  |||||| || || ||| ||| ||| |||||||| |||||||||||||       
T  17314990 ttattaagaaaactaaaacatagtagtttgtaacatagctttttgtgtcatctttgaaataaatttcatacgaaaatgtaaaagcaattttcattggtag 17314891  T
Q  286 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    ||| |||| || |||||||||   |||| |||||||||| | |||| ||||||||||    
T  17314890 ttgattatagagaaaatgaaaaggagagcaaattgaatgcactttggatttaatttt 17314834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 416
Target Start/End: Original strand, 30576045 - 30576089
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaat 416  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||    
T  30576045 gataaaaatttgtcttttttgcttatattttgggacaaagaaaat 30576089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 36538020 - 36537976
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||    
T  36538020 ataaaagtttgtcttttttgcttatattttgagacaaagaaaatg 36537976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 45190752 - 45190700
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttg 230  Q
    ||||||| || ||||||||| |||||||||||||||||||| |||||||||||    
T  45190752 aatcacacttgttaagaaaactaaaacataagaatttggagcatagttttttg 45190700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 11158721 - 11158675
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtg 232  Q
    |||||||||||| ||||||||||||||||||| |||| |||||||||    
T  11158721 ttattaagaaaactaaaacataagaatttggaatataattttttgtg 11158675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 186 - 287
Target Start/End: Complemental strand, 6401780 - 6401679
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    |||||||||||  ||||| |||  |||||| |||||||||||||||||| |  ||| || ||||||  ||  |||||||||||||||||| |||||| ||    
T  6401780 ttattaagaaatctaaaatatagtaatttgtagtatagttttttgtgttattcttgaaataagtttcctaaaaagatgtaaaaacaatttccattggtta 6401681  T
Q  286 tt 287  Q
    ||    
T  6401680 tt 6401679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 8673343 - 8673298
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||| |||||||||||||||| |||||||||| |||||||    
T  8673343 gataaaagttggtcttttttgcttataatttgggacaaagaaaatg 8673298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 362 - 419
Target Start/End: Complemental strand, 20051560 - 20051504
Alignment:
Q  362 tcttggaaaagataaaagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    ||||||||||||||||| |||||| ||||| |||||||||||| |||| |||||||||    
T  20051560 tcttggaaaagataaaaatttgtcgttttt-cttatattttggtacaaagaaaatgtg 20051504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 343
Target Start/End: Original strand, 25321618 - 25321743
Alignment:
Q  218 gtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaa 317  Q
    ||||| |||| |||||| || |||||| ||||||||| | |||||||||||| ||||||||| || ||    ||||||| ||||| |||   |||| |||    
T  25321618 gtataattttctgtgttctccttggaataagttttatggaaagatgtaaaaataattttcataggttaaaaattatggagaaaataaaaaggagagcaaa 25321717  T
Q  318 ttgaatgtaatttgcatttaatttta 343  Q
    || |||| || |||||||||||||||    
T  25321718 ttaaatgcaacttgcatttaatttta 25321743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 372 - 417
Target Start/End: Original strand, 29920489 - 29920534
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||| |||||||||||||||| ||||||| |||||||    
T  29920489 gataaaagtttgtgttttttgcttatatttagggacaaagaaaatg 29920534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 417
Target Start/End: Original strand, 8107834 - 8107882
Alignment:
Q  370 aagataaaagtttgtctttt-ttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||||||    
T  8107834 aagataaaaatttgtctttttttgcttatattttgggacaaagaaaatg 8107882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 11044019 - 11043975
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||| ||||||||||||||||||||| ||||| |||||||    
T  11044019 ataaaagttggtcttttttgcttatattttgagacaaagaaaatg 11043975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 416
Target Start/End: Original strand, 15958098 - 15958146
Alignment:
Q  368 aaaagataaaagtttgtcttttttgcttatattttgggacaacgaaaat 416  Q
    |||||| |||| ||||| |||||||||||||||||||||||| ||||||    
T  15958098 aaaagacaaaaatttgtattttttgcttatattttgggacaaagaaaat 15958146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 24612679 - 24612723
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||| ||||||||||||||||||||| ||||| |||||||    
T  24612679 ataaaagttggtcttttttgcttatattttgagacaaagaaaatg 24612723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 416
Target Start/End: Complemental strand, 38072158 - 38072114
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaat 416  Q
    |||||||||| |||||||||||||||| |||||||||| ||||||    
T  38072158 gataaaagttggtcttttttgcttataatttgggacaaagaaaat 38072114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 409
Target Start/End: Original strand, 41809022 - 41809058
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||||||||||||||||||||||||||||| |||||    
T  41809022 ataaaagtttgtcttttttgcttatattttgagacaa 41809058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 416
Target Start/End: Original strand, 25321785 - 25321828
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaat 416  Q
    ||||||||| ||||||||||||||||||||| ||||| ||||||    
T  25321785 ataaaagttggtcttttttgcttatattttgagacaaagaaaat 25321828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 27752753 - 27752590
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| ||| || ||   |||||  ||||| ||||||||||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  27752753 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 27752654  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| ||    ||||||| ||||| |||   |||  ||||| |||| || |||||||||||||||    
T  27752653 tggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaatttta 27752590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 415
Target Start/End: Complemental strand, 28348553 - 28348511
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaa 415  Q
    |||||||||||||||||||| ||||||||||||||||| |||||    
T  28348553 gataaaagtttgtctttttt-cttatattttgggacaaagaaaa 28348511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 281
Target Start/End: Complemental strand, 14693484 - 14693434
Alignment:
Q  231 tgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 281  Q
    |||| |||||| || || ||||||| |||||||||||||||||||||||||    
T  14693484 tgttatctttgaaataaattttataagaagatgtaaaaacaattttcattg 14693434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 341
Target Start/End: Complemental strand, 27740763 - 27740611
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    ||||||| ||||||||||||||  ||||||   |||| ||||||||||||| |   ||| |||||| |  | |||||||||||| |||| | ||||||||    
T  27740763 ttattaaaaaaattaaaacatagtaatttgagatataattttttgtgtttttt---gaataagtttcactgaaagatgtaaaaataattctaattggcta 27740667  T
Q  286 ttggttatggaaaaaat-gaaagaaagagaaaattgaatgtaatttgcatttaattt 341  Q
    ||| | ||| | ||||| ||||| ||||| |||| ||||| ||||| ||||||||||    
T  27740666 ttgatcatgaagaaaatagaaag-aagagcaaatcgaatgaaatttacatttaattt 27740611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 416
Target Start/End: Original strand, 41362846 - 41362888
Alignment:
Q  374 taaaagtttgtcttttttgcttatattttgggacaacgaaaat 416  Q
    |||||||| |||||||||||||||| |||||||||| ||||||    
T  41362846 taaaagttggtcttttttgcttataatttgggacaaagaaaat 41362888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 328
Target Start/End: Original strand, 374103 - 374162
Alignment:
Q  267 aaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaat 328  Q
    |||||||||| |||| |||||| ||||||| ||||||||||||| | |||||||||||||||    
T  374103 aaacaatttt-attgtctattgattatggagaaaatgaaagaaa-aaaaaattgaatgtaat 374162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 5217353 - 5217308
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||| |||||||||||||||| ||||| |||| |||||||    
T  5217353 gataaaagttggtcttttttgcttataatttggtacaaagaaaatg 5217308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 377 - 417
Target Start/End: Original strand, 2238785 - 2238825
Alignment:
Q  377 aagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||| |||||||||||||||||||| |||||| |||||||    
T  2238785 aagttggtcttttttgcttatattttaggacaaagaaaatg 2238825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #92
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 3099914 - 3099870
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||| |||||||||||||||||||||||  |||| |||||||    
T  3099914 ataaaagattgtcttttttgcttatattttgaaacaaagaaaatg 3099870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 409
Target Start/End: Complemental strand, 27621092 - 27621056
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  27621092 ataaaagtttgtcttttttgcttatatattgagacaa 27621056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 342
Target Start/End: Original strand, 29147297 - 29147393
Alignment:
Q  246 aagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    |||||| ||| ||||||| |||||||||||||||| | | ||| |||| || |||||||||   |||  ||||| |||| | |||||||||||||||    
T  29147297 aagtttaataagaagatggaaaaacaattttcattagttgttgattatagagaaaatgaaatggagatcaaattaaatgcagtttgcatttaatttt 29147393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 280
Target Start/End: Original strand, 33851061 - 33851117
Alignment:
Q  224 ttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 280  Q
    ||||||||||| ||||||||| |||||| || | |||||||||||| |||| |||||    
T  33851061 ttttttgtgttctctttggaataagtttcatggaaagatgtaaaaataattctcatt 33851117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #96
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 409
Target Start/End: Complemental strand, 35260019 - 35259983
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  35260019 ataaaagttggtcttttttgcttatattttgagacaa 35259983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #97
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 409
Target Start/End: Complemental strand, 37598032 - 37597996
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  37598032 ataaaagttggtcttttttgcttatattttgagacaa 37597996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 183; Significance: 8e-99; HSPs: 90)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 178 - 419
Target Start/End: Complemental strand, 14806039 - 14805798
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  14806039 aatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtattttctttg-aaaaagttttataggaagatgtaaaaacaattttc 14805941  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac-nnnnnnnntcttggaaaagataa 376  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||    
T  14805940 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaatcttggaaaagataa 14805841  T
Q  377 aagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    |||||||||| |||||||||||||||||||||| |||||||||    
T  14805840 aagtttgtctgttttgcttatattttgggacaaagaaaatgtg 14805798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 178 - 419
Target Start/End: Complemental strand, 15253033 - 15252792
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  15253033 aatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtattttctttg-aaaaagttttataggaagatgtaaaaacaattttc 15252935  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac-nnnnnnnntcttggaaaagataa 376  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||    
T  15252934 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaatcttggaaaagataa 15252835  T
Q  377 aagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    |||||||||| |||||||||||||||||||||| |||||||||    
T  15252834 aagtttgtctgttttgcttatattttgggacaaagaaaatgtg 15252792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 178 - 419
Target Start/End: Original strand, 25737617 - 25737859
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25737617 aatcacacttattaagaaaactaaaacataaaaatttggggtatagttttgtgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 25737716  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac-nnnnnnnntcttggaaaagataa 376  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||    
T  25737717 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaatcttggaaaagataa 25737816  T
Q  377 aagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    |||||| | |||||||||||||||||||||||| |||||||||    
T  25737817 aagttttttttttttgcttatattttgggacaaagaaaatgtg 25737859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 178 - 419
Target Start/End: Original strand, 19912759 - 19913001
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  19912759 aatcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatagtaaaatgtaaaaacaattttc 19912858  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac-nnnnnnnntcttggaaaagataa 376  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||         |||||||||||||||    
T  19912859 attggttattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttcatgagaataacaaaaaaaaatcttggaaaagataa 19912958  T
Q  377 aagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    |||||||||||||||  ||||||||||||| || |||||||||    
T  19912959 aagtttgtcttttttatttatattttgggataaagaaaatgtg 19913001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 178 - 419
Target Start/End: Complemental strand, 45486125 - 45485881
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45486125 aatcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaataattttc 45486026  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac---nnnnnnnntcttggaaaagat 374  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             |||||||||||    
T  45486025 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaaaaaattggaaaagat 45485926  T
Q  375 aaaagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    |||| ||||||||||||||||||||||| |||||| |||||||||    
T  45485925 aaaattttgtcttttttgcttatatttttggacaaagaaaatgtg 45485881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 178 - 416
Target Start/End: Original strand, 46760247 - 46760487
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  46760247 aatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttc 46760346  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac--nnnnnnnntcttggaaaagata 375  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||          | ||| |||| |||    
T  46760347 attggctattggttatggaaaaaatgaaagaaagagaatattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaaatattgaaaaaaata 46760446  T
Q  376 aaagtttgtcttttttgcttatattttgggacaacgaaaat 416  Q
    |||||||||||||||| ||||||||||||||||| ||||||    
T  46760447 aaagtttgtcttttttacttatattttgggacaaagaaaat 46760487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 178 - 419
Target Start/End: Complemental strand, 18102700 - 18102457
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18102700 aatcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttc 18102601  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa--cnnnnnnnntcttggaaaagata 375  Q
    |||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||           ||||| ||||||||    
T  18102600 attggccattggttatggaaaaaatgaaagagagtgaaaattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaaatcttgaaaaagata 18102501  T
Q  376 aaagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  18102500 aaagtttgtcttttttgcttatattttgggacaaagaaaatgtg 18102457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 178 - 419
Target Start/End: Complemental strand, 35923421 - 35923180
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  35923421 aatcacacttattaagaaaactaaaacataaaaatttggagtatagttttt-gtgttttctttggaaaaagttttatagaaagatgtaaaaacaattttc 35923323  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac-nnnnnnnntcttggaaaagataa 376  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         | ||| |||||||||    
T  35923322 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaatattgaaaaagataa 35923223  T
Q  377 aagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    |||||| ||||||||  |||||||||||||||| |||||||||    
T  35923222 aagtttatctttttttattatattttgggacaaagaaaatgtg 35923180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 6191215 - 6191041
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  6191215 aatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttttaaaaaagttttataggaagatgtaaaaacaattttc 6191116  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||||||| ||||||||||| ||| |||||| |||||||||| |||||||||||||||||||||    
T  6191115 attggctattggttatggagaaaatgaaagagagataaaattaaatgtaattttcatttaattttatgagaataa 6191041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 186 - 352
Target Start/End: Complemental strand, 25944738 - 25944572
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    |||||||||||| ||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  25944738 ttattaagaaaactaaaatataagaatttggagtataagtttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcca 25944639  T
Q  286 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25944638 ttggttatggaaaaaataaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataa 25944572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 199 - 352
Target Start/End: Original strand, 20123691 - 20123844
Alignment:
Q  199 taaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaa 298  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  20123691 taaaacataagaatttggagtatagttttttgtgtattctttggaaaaagttttatagcaagatgtaaaaacaattttcattggctattgcttatggaaa 20123790  T
Q  299 aaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  20123791 aaatgaaagagaaagaaaattgaatgtaatttgcatttaattttatgagaataa 20123844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 4910625 - 4910797
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||| | |||| ||||||||||||||||| ||||||  |||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  4910625 aatcacacttatttaaaaaactaaaacataagaatttgaagtata--tttttgtgttttctttagaaaaagttttataggaagatgtaaaaataattttc 4910722  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||    
T  4910723 attggctattgattatggaaaaaatgaaagagagataaaattgaatgtaatttgcatttaattttatgagcataa 4910797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 47779774 - 47779600
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||| |||||||||||| || ||||||||||||||||||||| ||| |||||| || ||||||||||||||||||||||    
T  47779774 aatcacacttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttctttagaataagtttcatgggaagatgtaaaaacaattttc 47779675  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||| | |||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  47779674 attggcaactggttatggaaaaaataaaagaaagagaaaattaaatgtaatttgcatttaatttcatgagaataa 47779600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 178 - 314
Target Start/End: Original strand, 12632334 - 12632470
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||    
T  12632334 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttatgttttctttgaaaaaagtttcataggaagatgtaaaaacaattttc 12632433  T
Q  278 attggctattggttatggaaaaaatgaaagaaagaga 314  Q
    |||||||||||| | |||||||||| ||||| |||||    
T  12632434 attggctattggctgtggaaaaaataaaagagagaga 12632470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 22632259 - 22632085
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||| ||||| | |||| || |||| ||||||||||||||||| || |||||| || ||||||||||||||||||||||    
T  22632259 aatcacacttattaagaaaactaaagcataaaagtttgtagcatagatttttgtgttttctttgaaataagtttcatgggaagatgtaaaaacaattttc 22632160  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||| |||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||| ||||||||||    
T  22632159 attggatattggttatggaaaaaatggaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataa 22632085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 44683047 - 44682874
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||||| |||||||||| || || |||||||||||||||||| | ||||||||||| ||||||| |||||| ||  |||||||||||||||||||||    
T  44683047 aatcacattcattaagaaaactagaaaataagaatttggagtataatattttgtgttttttttggaataagtttgatgcgaagatgtaaaaacaattttc 44682948  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||| ||||||||||||| | |||||||||| | ||||||||| |||||||||||| ||||||| ||||||||||    
T  44682947 attgactattggttatgg-agaaatgaaagatatagaaaattggatgtaatttgcaattaatttcatgagaataa 44682874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 186 - 352
Target Start/End: Complemental strand, 14574726 - 14574560
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    ||||||||||||  |||| |||||||||||||||||||||||||||||||||||   || |||||| || |||||||||||||| ||||| ||||| |||    
T  14574726 ttattaagaaaaccaaaatataagaatttggagtatagttttttgtgttttcttgataataagtttcatgggaagatgtaaaaataatttccattgtcta 14574627  T
Q  286 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||| | |||||| |||| || ||||||||| | ||||||||||||||||||||||||||||    
T  14574626 ttggttatgaagaaaatggaagagagtgaaaattgattttaatttgcatttaattttatgagaataa 14574560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 211 - 352
Target Start/End: Original strand, 47557622 - 47557765
Alignment:
Q  211 atttggagtatagttttttgtgttttctttgg--aaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaaga 308  Q
    |||||||||||||||||||||||||| |||    |||||  ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  47557622 atttggagtatagttttttgtgtttttttttttaaaaaaaatttataggaagatgtaaaaacaattttcattggctattaattatggaaaaaatgaaaga 47557721  T
Q  309 aagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
     | |||||||| |||||||||||||||||||| |||||||||||    
T  47557722 gaaagaaaattaaatgtaatttgcatttaattctatgagaataa 47557765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 186 - 352
Target Start/End: Complemental strand, 15995882 - 15995715
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagtttttt-gtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggct 284  Q
    ||||||||||||  |||| ||||||||||||||||||||||||| ||||||||||   || |||||| || | |||||||||||| ||||| |||||| |    
T  15995882 ttattaagaaaaccaaaatataagaatttggagtatagtttttttgtgttttcttcataataagtttcatggaaagatgtaaaaataatttccattggtt 15995783  T
Q  285 attggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||||| | |||||| |||| || ||||||||| | ||||||||||||||||||||||||||||    
T  15995782 attggttatgaagaaaatggaagagagtgaaaattgattttaatttgcatttaattttatgagaataa 15995715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 194 - 352
Target Start/End: Complemental strand, 11780171 - 11780014
Alignment:
Q  194 aaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 293  Q
    |||| ||||| ||||||||||||| |||||||||| |||||||||||  || || |||||| |||||||||||||| ||||| ||||| |||||  ||||    
T  11780171 aaaactaaaatataagaatttggaatatagtttttcgtgttttctttaaaataaattttattggaagatgtaaaaataattt-cattgactatttcttat 11780073  T
Q  294 ggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    | | |||||| |||||||||||||||  |||||||||||||||||||||||||||||||    
T  11780072 gaagaaaatggaagaaagagaaaatttgatgtaatttgcatttaattttatgagaataa 11780014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 16917641 - 16917468
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||||||||||||||||||||| |||||| | ||||   |||||| |||||||||||| |||||| || ||||||||||||||||||||||    
T  16917641 aatcacacttattaagaaaattaaaacataaaaatttgaaatataacattttgttttttctttggaataagtttcatgggaagatgtaaaaacaattttc 16917542  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||  ||||||||||| |  ||||||  | | ||||||||||||| |||||||||||||||||| |||| |||||    
T  16917541 attaactattggttat-gtgaaaatgggaaatagagaaaattgaaagtaatttgcatttaatttaatgaaaataa 16917468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 206 - 352
Target Start/End: Original strand, 2610586 - 2610732
Alignment:
Q  206 taagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaa 305  Q
    ||||||||||||||||| ||||||| | || |||||||| ||  ||||||| |||||||||||||| ||||| |||||||||||||||||| |||||| |    
T  2610586 taagaatttggagtatatttttttgcgcttcctttggaataaaatttatagaaagatgtaaaaacatttttctttggctattggttatggagaaaatgga 2610685  T
Q  306 aga-aagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||| |||| |||||||||||||||||||| ||||||| ||||||||||    
T  2610686 agagaaga-aaaattgaatgtaatttgcacttaatttcatgagaataa 2610732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 243 - 352
Target Start/End: Complemental strand, 9158194 - 9158086
Alignment:
Q  243 aaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||| | | ||| |||||||||||||||||||||||||    
T  9158194 aaaaagttttataggaagatgtaaaaacaattttctttggccattggttat-gaaaaaatgaaagagaaaaaaatttgaatgtaatttgcatttaatttt 9158096  T
Q  343 atgagaataa 352  Q
    || |||||||    
T  9158095 ataagaataa 9158086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 182 - 342
Target Start/End: Complemental strand, 39170700 - 39170540
Alignment:
Q  182 acatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 281  Q
    |||||||||||||||||||||| |||  | |||| |  ||||||| ||||||| || ||| || |||||||||| ||||||||||||||||||||||||     
T  39170700 acatttattaagaaaattaaaatatagtagtttgtaacatagtttattgtgttatccttgaaataagttttatacgaagatgtaaaaacaattttcattt 39170601  T
Q  282 gctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    |  |||| |||| || ||||||||||| | || |||||||||| | |||||||||||||||    
T  39170600 gtcattgattattgagaaaatgaaagagatagcaaattgaatgcactttgcatttaatttt 39170540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 311 - 419
Target Start/End: Original strand, 12633110 - 12633219
Alignment:
Q  311 gagaaaattgaatgtaatttgcatttaattttatgagaat-aacnnnnnnnntcttggaaaagataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    |||||||||||||||||||||||||||||||||||||||| |||        ||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  12633110 gagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcttggaaaagataaaagtttgtctattttgattatattttgggacaa 12633209  T
Q  410 cgaaaatgtg 419  Q
      ||||||||    
T  12633210 aaaaaatgtg 12633219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 178 - 342
Target Start/End: Complemental strand, 38260486 - 38260322
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||||| |||||||||||||   | |||| | |||||||||||||||| |  ||| || ||||||||||| ||| |||||||| |||||||    
T  38260486 aatcacacttattaaaaaaattaaaacattgtagtttgtaatatagttttttgtgttattcttgaaataagttttatagaaagttgtaaaaataattttc 38260387  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    ||||| ||||  |||| || ||||||||||| |||| ||||| |||| | |||||||||||||||    
T  38260386 attggttatttattattgagaaaatgaaagagagagcaaattaaatgcactttgcatttaatttt 38260322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 221 - 327
Target Start/End: Original strand, 31549936 - 31550042
Alignment:
Q  221 tagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattg 320  Q
    |||||||||| ||||||||| ||| || |||||||||||||||||||||||| |||||||| | ||||||||||| ||||| |  ||||| |||||||||    
T  31549936 tagttttttgcgttttctttagaataaattttataggaagatgtaaaaacaactttcattgacaattggttatgggaaaaaggggagaaaaagaaaattg 31550035  T
Q  321 aatgtaa 327  Q
    |||||||    
T  31550036 aatgtaa 31550042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 212 - 352
Target Start/End: Original strand, 35068872 - 35068999
Alignment:
Q  212 tttggagtatagtttttt-gtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaa 310  Q
    |||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||| || ||||             
T  35068872 tttggaatatagtttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttaattagctattggttatagagaaaa--------- 35068962  T
Q  311 gagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
         |||||||||||||||||||||||| ||||||||||||    
T  35068963 -----aattgaatgtaatttgcatttaatattatgagaataa 35068999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 202 - 346
Target Start/End: Complemental strand, 48413859 - 48413723
Alignment:
Q  202 aacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaa 301  Q
    ||||||||||||||||||||| ||||  ||||||| ||   || |||||||||  ||||||| ||||||||||||||||| |||||||||||||| ||||    
T  48413859 aacataagaatttggagtataatttt--gtgttttttt---aataagttttatgagaagatgcaaaaacaattttcattgactattggttatggagaaaa 48413765  T
Q  302 tgaaagaaagagaaaattgaatgtaatttgcatttaattttatga 346  Q
    |  |||  |||||||||||||| ||||||||||||||||| ||||    
T  48413764 tagaag--agagaaaattgaat-taatttgcatttaatttcatga 48413723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 180 - 341
Target Start/End: Original strand, 37767011 - 37767172
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    |||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||  ||  | ||| || |||| || ||||||||||||||||    
T  37767011 tcacatttattaagaaaactaaaacatgataatttggagtatagttttttgtgttttctttaaaactaatttcatgggaacatataaaaacaattttcat 37767110  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattt 341  Q
        |||| | ||| |||||||||| ||  |||  ||||| |||| |||||||| |||||||    
T  37767111 caattatttgctatagaaaaaatgagagggagaacaaattaaatgcaatttgcacttaattt 37767172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 178 - 342
Target Start/End: Original strand, 35887959 - 35888123
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||||| |||| |||||||||  | |||| |  ||| ||||||||||| |||||| || || |||||||||||||||||||||||||||||    
T  35887959 aatcacacttattaaaaaaactaaaacatagtagtttgtaacataattttttgtgttatctttgaaataacttttataggaagatgtaaaaacaattttc 35888058  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    ||| |   ||| |||| || ||||| ||| | |||| |||||||||| | ||||||||| |||||    
T  35888059 attagtagttgattatagagaaaataaaaaagagagcaaattgaatgcactttgcattttatttt 35888123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 246 - 341
Target Start/End: Original strand, 24151640 - 24151734
Alignment:
Q  246 aagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattt 341  Q
    ||||||||||||||||||||||||||||||||| ||  |||||||||| || |||| |||||| |||| |||||||||||| ||||||| ||||||    
T  24151640 aagttttataggaagatgtaaaaacaattttcactgattattggttattgagaaaa-gaaagagagagcaaattgaatgtactttgcatgtaattt 24151734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 257 - 351
Target Start/End: Original strand, 27810804 - 27810898
Alignment:
Q  257 gaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaata 351  Q
    |||||||||||||||||||| ||||| ||||| ||||  | |||||| |||| |  ||||||||||||||||||||||||||||| |||||||||    
T  27810804 gaagatgtaaaaacaatttttattggttattgattatatagaaaatggaagagatggaaaattgaatgtaatttgcatttaatttcatgagaata 27810898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 220 - 342
Target Start/End: Original strand, 31768994 - 31769116
Alignment:
Q  220 atagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaatt 319  Q
    ||||||||||||||  |||||| || ||||||||||||||||||||||||||||||||||||    ||| |||| || ||||| |||   |||| |||||    
T  31768994 atagttttttgtgtcatctttgaaataagttttataggaagatgtaaaaacaattttcattgatagttgattatagagaaaataaaaatgagagcaaatt 31769093  T
Q  320 gaatgtaatttgcatttaatttt 342  Q
    ||||| | |||||||||||||||    
T  31769094 gaatgcactttgcatttaatttt 31769116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 178 - 353
Target Start/End: Original strand, 4237701 - 4237880
Alignment:
Q  178 aatcacatttattaagaa---aattaaaacataagaatttggagtatagtttttt-gtgttttctttggaaaaagttttataggaagatgtaaaaacaat 273  Q
    ||||||||||||||| ||   || ||||| ||||||||||  | ||||||||||| || |||| |||| || || ||| ||  ||||||||||||| |||    
T  4237701 aatcacatttattaataagcaaagtaaaatataagaatttaaaatatagtttttttgtattttttttgaaataactttcatgagaagatgtaaaaataat 4237800  T
Q  274 tttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac 353  Q
    ||| ||||||||||| ||| | | |||||| |||| | | | |||||||| |||||||||||||||||||| ||||||||    
T  4237801 tttaattggctattgattaggaagaaaatggaagagaaatataattgaatataatttgcatttaattttattagaataac 4237880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 341
Target Start/End: Complemental strand, 29713357 - 29713196
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    |||||||||||||||||| ||| |||| |   |||| |||||||||| ||||||  ||||| ||| || ||| |||| ||| ||||||||||||||||||    
T  29713357 tcacatttattaagaaaactaagacatcattgtttgtagtatagtttcttgtgtcatctttagaataactttcatagaaagttgtaaaaacaattttcat 29713258  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattt 341  Q
    ||| ||||  |||| || ||||||||||| || | | | | ||| |||||||||||||||||    
T  29713257 tggatattaattatagagaaaatgaaagagagggtataataaatataatttgcatttaattt 29713196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 178 - 282
Target Start/End: Complemental strand, 10248700 - 10248594
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaa-tttggagtatagtttt-ttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattt 275  Q
    |||||||||||||||||||| |||||||| || | |||| |  |||||||| ||||||| || ||| || ||||||||||| ||||||||||||||||||    
T  10248700 aatcacatttattaagaaaactaaaacattagtagtttgtaacatagttttcttgtgttatccttgaaataagttttatagaaagatgtaaaaacaattt 10248601  T
Q  276 tcattgg 282  Q
    |||||||    
T  10248600 tcattgg 10248594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 243 - 308
Target Start/End: Complemental strand, 4069108 - 4069043
Alignment:
Q  243 aaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaaga 308  Q
    |||||||||||||| |||||||||||| |||||||||||| ||||||||||||| |||||| ||||    
T  4069108 aaaaagttttatagaaagatgtaaaaagaattttcattggttattggttatggagaaaatggaaga 4069043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 362 - 419
Target Start/End: Original strand, 47557922 - 47557979
Alignment:
Q  362 tcttggaaaagataaaagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  47557922 tcttgaaaaacataaaagtttgtcttttttgcttatattttgggacaaagaaaatgtg 47557979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 186 - 343
Target Start/End: Complemental strand, 48879545 - 48879388
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    |||||||||||| ||| || |||  |||||  ||||| |||||||| || || |||||| ||||||||||| |||||||||||| |||| ||||||| ||    
T  48879545 ttattaagaaaactaacacttaatgatttgaggtataattttttgtattctccttggaataagttttatagaaagatgtaaaaataattctcattggtta 48879446  T
Q  286 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
        ||||||| ||||| |||   |||  |||||||||| ||||||||||||||||||    
T  48879445 aaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 48879388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 247 - 330
Target Start/End: Original strand, 8015732 - 8015813
Alignment:
Q  247 agttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaattt 330  Q
    ||||||||| |||||||||||||||||||| ||||| ||||| |||| ||||||||| |||  ||||||||||||||| |||||    
T  8015732 agttttataagaagatgtaaaaacaatttttattggttattgattatagaaaaaatgcaag--agagaaaattgaatgcaattt 8015813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 33153202 - 33153039
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| ||||||| ||||  ||||||||| | |||| |||||| ||||||||||| |  ||| || || |||||| | ||||||||||||||||| | ||    
T  33153202 tcacacttattaaaaaaacaaaaacataatagtttgaagtataattttttgtgttcttcttgaaataaattttatggaaagatgtaaaaacaattcttat 33153103  T
Q  280 tggctattggttatggaaaaaat-gaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| || || ||||||| ||||| |||||  |||  |||||||||| ||||||||||||||||||    
T  33153102 tggttaatgattatggagaaaatagaaag-gagaacaaattgaatgcaatttgcatttaatttta 33153039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 319 - 419
Target Start/End: Complemental strand, 16562778 - 16562676
Alignment:
Q  319 tgaatgtaatttgcatttaattttatgagaataac--nnnnnnnntcttggaaaagataaaagtttgtcttttttgcttatattttgggacaacgaaaat 416  Q
    |||| ||||||||||||||||||||||||||||||            ||||||||||||||| |||||||||||| ||||||||||||||||| ||||||    
T  16562778 tgaaagtaatttgcatttaattttatgagaataacaaaaaaaaaaaattggaaaagataaaaatttgtcttttttacttatattttgggacaaagaaaat 16562679  T
Q  417 gtg 419  Q
    |||    
T  16562678 gtg 16562676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 364 - 419
Target Start/End: Original strand, 16602931 - 16602986
Alignment:
Q  364 ttggaaaagataaaagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||    
T  16602931 ttggaaaagataaaaatttgtcttttttacttatattttgggacaaagaaaatgtg 16602986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 224 - 343
Target Start/End: Original strand, 21654116 - 21654235
Alignment:
Q  224 ttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaat 323  Q
    ||||||||||| || |||||| |||||| || | |||||||||||| |||| ||||||| ||    ||||||| |||||||||   |||  |||||||||    
T  21654116 ttttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcattggttaaaaattatggagaaaatgaaaaggagaacaaattgaat 21654215  T
Q  324 gtaatttgcatttaatttta 343  Q
    ||||||||||||||||||||    
T  21654216 gtaatttgcatttaatttta 21654235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 370 - 417
Target Start/End: Complemental strand, 25944522 - 25944475
Alignment:
Q  370 aagataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  25944522 aagataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 25944475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 35084052 - 35084215
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| ||| |||||||| ||||||| |  ||||||   |||||||||||||||| |  ||| || |||||| |||  ||||||||||||||||| | ||    
T  35084052 tcacacttaataagaaaactaaaacacagtaatttgagttatagttttttgtgttcttcttgaaataagtttcataaaaagatgtaaaaacaattcttat 35084151  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| || || ||||||| |||||||||   |||  ||||| |||| ||||||||||||||||||    
T  35084152 tggataatgattatggagaaaatgaaaaggagaacaaattcaatgcaatttgcatttaatttta 35084215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 43107856 - 43108019
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    |||||||||||||||||| ||| || ||   |||||  ||||| ||||||||||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  43107856 tcacatttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 43107955  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| ||    ||||||| ||||| |||   |||  |||||||||| ||||||||||||||||||    
T  43107956 tggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 43108019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 185 - 352
Target Start/End: Original strand, 19492390 - 19492559
Alignment:
Q  185 tttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagtt--ttataggaagatgtaaaaacaattttcattgg 282  Q
    ||||||||||||| |||||||||| ||||| |||||||  ||||||| |||| |||  | ||| ||  | || | || ||| |||||||||||| || |     
T  19492390 tttattaagaaaactaaaacataaaaatttagagtataactttttgtatttttttttaataaatttcatcatggtaatatgcaaaaacaatttttatcga 19492489  T
Q  283 ctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    || ||||||||||| |||||  |||| | |||||||||||| ||||||| ||||||||| ||| ||||||    
T  19492490 ctgttggttatggagaaaatagaagagaaagaaaattgaatataatttgtatttaatttcatgcgaataa 19492559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 35181355 - 35181192
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| ||| || ||   |||||  ||||| ||||||||||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  35181355 tcacacttattaagaaaactaacacttactgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 35181256  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| ||    ||||||| ||||| |||   |||  |||||||||| ||||||||||||||||||    
T  35181255 tgggtaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 35181192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 362 - 416
Target Start/End: Complemental strand, 39174235 - 39174181
Alignment:
Q  362 tcttggaaaagataaaagtttgtcttttttgcttatattttgggacaacgaaaat 416  Q
    ||||| |||||||||||||||||||||||| |||||||||||| |||| ||||||    
T  39174235 tcttgaaaaagataaaagtttgtcttttttacttatattttggaacaaagaaaat 39174181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 186 - 343
Target Start/End: Complemental strand, 40560539 - 40560382
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    ||||||| |||| ||| || ||| ||||||  ||||| ||||||||||| || ||| || ||||||||||| |||||||||||| |||| ||||||| ||    
T  40560539 ttattaaaaaaactaacacttaataatttgaggtataattttttgtgttctccttgaaataagttttatagaaagatgtaaaaataattctcattggtta 40560440  T
Q  286 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
        ||||||| ||||| |||   |||  ||||| |||| || |||||||||||||||    
T  40560439 aaaattatggagaaaataaaaaggagaataaattaaatgcaacttgcatttaatttta 40560382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 342
Target Start/End: Complemental strand, 3778140 - 3777984
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    ||||||||||||  ||||||||  | |||| |  ||||||| ||||||| || ||| || || ||||  ||||| || |||||| |||||||||||   |    
T  3778140 ttattaagaaaaccaaaacatagtagtttgcaacatagtttattgtgttatccttgaaataatttttccaggaaaatataaaaataattttcattgatca 3778041  T
Q  286 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    |||||||| || ||||||||||| | || |||||||||| | ||| |||||||||||    
T  3778040 ttggttattgagaaaatgaaagagaaagcaaattgaatgcacttttcatttaatttt 3777984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 18800919 - 18800963
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||| |||||||||||||||||||||||||||| |||||||    
T  18800919 ataaaagtatgtcttttttgcttatattttgggacaaagaaaatg 18800963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 47778715 - 47778671
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||| |||||||||||||||||||||||||||||| |||||||    
T  47778715 ataaaaatttgtcttttttgcttatattttgggacaaagaaaatg 47778671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 18206270 - 18206433
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||||||| || ||   |||||  ||||| ||||||||||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  18206270 tcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 18206369  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| ||    ||||||||||||| |||   |||  ||||| |||  || |||||||||||||||    
T  18206370 tggttaaaaattatggaaaaaataaaaaggagaacaaattaaatacaacttgcatttaatttta 18206433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 44600609 - 44600446
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    |||||||||||||||||| ||| || ||   |||||  ||||| ||||||||||| || || ||| |||||| |  | |||||||||||| |||||||||    
T  44600609 tcacatttattaagaaaactaacacttagcgatttgaggtataattttttgtgttctccttagaataagtttcaaggaaagatgtaaaaataattttcat 44600510  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| ||    ||||||| ||||  ||| | |||  |||||||||| || |||||||||||||||    
T  44600509 tggttaaaaattatggagaaaacaaaaaagagaacaaattgaatgcaacttgcatttaatttta 44600446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 419
Target Start/End: Original strand, 4910850 - 4910896
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    ||||||||||||  ||||||||||||||||||||||| |||||||||    
T  4910850 ataaaagtttgttctttttgcttatattttgggacaaagaaaatgtg 4910896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 343
Target Start/End: Original strand, 41815682 - 41815807
Alignment:
Q  218 gtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaa 317  Q
    ||||| ||||||||||| || |||||| ||||||||| | |||||||||||| |||| ||||||| ||    ||||||| ||||| |||   |||  |||    
T  41815682 gtataattttttgtgttctccttggaataagttttatggaaagatgtaaaaataattctcattggttaaaaattatggagaaaataaaaaggagaacaaa 41815781  T
Q  318 ttgaatgtaatttgcatttaatttta 343  Q
    ||||||| || || ||||||||||||    
T  41815782 ttgaatgcaacttacatttaatttta 41815807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 343
Target Start/End: Original strand, 48937878 - 48938003
Alignment:
Q  218 gtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaa 317  Q
    ||||| ||||||||||| || |||||| ||||||||| | |||||||||||| |||| | ||||| ||    ||||||| ||||| |||   |||  |||    
T  48937878 gtataattttttgtgttctccttggaataagttttatggaaagatgtaaaaataattcttattggttaaaaattatggagaaaataaaaagtagaacaaa 48937977  T
Q  318 ttgaatgtaatttgcatttaatttta 343  Q
    ||||||| |||||| |||||||||||    
T  48937978 ttgaatgcaatttgtatttaatttta 48938003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 3157394 - 3157350
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||| ||||||||||||||||||||| ||||| |||||||    
T  3157394 ataaaagttagtcttttttgcttatattttgagacaaggaaaatg 3157350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 351
Target Start/End: Complemental strand, 4069020 - 4068972
Alignment:
Q  304 aaagaaagagaaaa-ttgaatgtaatttgcatttaattttatgagaata 351  Q
    |||||||||||||| |||||||||||||| ||||||||| |||||||||    
T  4069020 aaagaaagagaaaaattgaatgtaatttgtatttaatttcatgagaata 4068972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 341
Target Start/End: Complemental strand, 22369313 - 22369233
Alignment:
Q  261 atgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattt 341  Q
    ||||||||| |||||| ||||| |||| ||||| || ||||||||||| |||| | | |||||| || |||||||||||||    
T  22369313 atgtaaaaataatttttattggttattagttatagacaaaatgaaagagagagcataatgaatgcaaattgcatttaattt 22369233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 416
Target Start/End: Original strand, 24151776 - 24151820
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaat 416  Q
    |||||||||| |||||||||||||||| |||||||||| ||||||    
T  24151776 gataaaagttggtcttttttgcttataatttgggacaaagaaaat 24151820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 30082322 - 30082278
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||| || ||||||||||||||||||||||||||| |||||||    
T  30082322 ataaaaattggtcttttttgcttatattttgggacaaagaaaatg 30082278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 36576376 - 36576332
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||||||||| ||||||||||| ||||| |||||||    
T  36576376 ataaaagtttgtcttttttacttatattttgagacaaagaaaatg 36576332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 44600404 - 44600360
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||| ||||||||||||||||||||| ||||| |||||||    
T  44600404 ataaaagttggtcttttttgcttatattttgagacaaagaaaatg 44600360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 416
Target Start/End: Complemental strand, 9158033 - 9157990
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaat 416  Q
    |||||||||||||||||||| ||||||||||||| || ||||||    
T  9158033 ataaaagtttgtcttttttgattatattttgggataaagaaaat 9157990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 343
Target Start/End: Original strand, 19933050 - 19933169
Alignment:
Q  224 ttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaat 323  Q
    ||||||||||| || |||||| |||||| || | |||||||||||| |||||||||||| ||    ||||||| ||||| |||   |||  ||||| |||    
T  19933050 ttttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattaaat 19933149  T
Q  324 gtaatttgcatttaatttta 343  Q
    | || |||||||||||||||    
T  19933150 gcaacttgcatttaatttta 19933169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 343
Target Start/End: Original strand, 19964189 - 19964308
Alignment:
Q  224 ttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaat 323  Q
    ||||||||||| || |||||| |||||| || | |||||||||||| |||||||||||| ||    ||||||| ||||| |||   |||  ||||| |||    
T  19964189 ttttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattaaat 19964288  T
Q  324 gtaatttgcatttaatttta 343  Q
    | || |||||||||||||||    
T  19964289 gcaacttgcatttaatttta 19964308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 341
Target Start/End: Original strand, 33092669 - 33092792
Alignment:
Q  219 tatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaa-ttttcattggctattggttatggaaaaaatgaaagaaagagaaaa 317  Q
    |||||||| ||||||| || ||  || |||||| |||| || |||||||||||| |||| ||||| |||| ||||| |  |||||||||| ||||| | |    
T  33092669 tatagtttcttgtgttatcattaaaataagtttcatagaaaaatgtaaaaacaattttttattggttattagttatagtgaaaatgaaaggaagagcata 33092768  T
Q  318 ttgaatgtaatttgcatttaattt 341  Q
     |||||| | ||||||||||||||    
T  33092769 atgaatgcattttgcatttaattt 33092792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 353
Target Start/End: Original strand, 16602884 - 16602918
Alignment:
Q  319 tgaatgtaatttgcatttaattttatgagaataac 353  Q
    |||| ||||||||||||||||||||||||||||||    
T  16602884 tgaaagtaatttgcatttaattttatgagaataac 16602918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 418
Target Start/End: Original strand, 35069051 - 35069097
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatgt 418  Q
    |||||||||||||| ||||| |||||||||||||||||  |||||||    
T  35069051 gataaaagtttgtcatttttacttatattttgggacaaaaaaaatgt 35069097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 343
Target Start/End: Complemental strand, 3157561 - 3157436
Alignment:
Q  218 gtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaa 317  Q
    ||||| ||||||||||| |||||| || |||||| || | |||||||||||| |||| ||||||| ||    ||||||| ||||| |||   | |  |||    
T  3157561 gtataattttttgtgttctctttgaaataagtttcatggaaagatgtaaaaataattctcattggttaaaaattatggagaaaataaaaaggaaaacaaa 3157462  T
Q  318 ttgaatgtaatttgcatttaatttta 343  Q
    ||||||| || |||||||||||||||    
T  3157461 ttgaatgcaacttgcatttaatttta 3157436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 409
Target Start/End: Original strand, 20123896 - 20123933
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  20123896 gataaacgtttgtcttttttgattatattttgggacaa 20123933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 343
Target Start/End: Original strand, 29236057 - 29236181
Alignment:
Q  218 gtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaa 317  Q
    ||||| |||||||| || | ||||||| |||||| |||| || || ||||||||||||| ||||| || || ||||||| | ||| |||   ||| ||||    
T  29236057 gtataattttttgtattctttttggaataagtttcatagaaatatataaaaacaatttttattggttaatgattatggagagaataaaaaggaga-aaaa 29236155  T
Q  318 ttgaatgtaatttgcatttaatttta 343  Q
    ||||||| |||||  |||||||||||    
T  29236156 ttgaatgcaatttatatttaatttta 29236181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 30082438 - 30082353
Alignment:
Q  258 aagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||||||||||||||||| | ||||| || || ||||||| | |||  || | |||  |||||||||| ||||||||||||||||||    
T  30082438 aagatgtaaaaacaattcttattggttaatgattatggagagaatagaaaagagaataaattgaatgcaatttgcatttaatttta 30082353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 414
Target Start/End: Complemental strand, 39337485 - 39337444
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaa 414  Q
    ||||||||| || |||||||||||||||||||||||| ||||    
T  39337485 ataaaagttggtattttttgcttatattttgggacaaagaaa 39337444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 343
Target Start/End: Original strand, 41890303 - 41890356
Alignment:
Q  290 ttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||||||| ||||| |||  ||||  |||||||||||||||||||||||||||||    
T  41890303 ttatggagaaaataaaaagaagaacaaattgaatgtaatttgcatttaatttta 41890356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 409
Target Start/End: Complemental strand, 44682816 - 44682779
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  44682816 gataaaagtttgtcttttttgcttacattttggaacaa 44682779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 9818439 - 9818395
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||| ||||||||||||||||||||| || || |||||||    
T  9818439 ataaaagttggtcttttttgcttatattttgagaaaaagaaaatg 9818395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 282
Target Start/End: Complemental strand, 9818593 - 9818529
Alignment:
Q  218 gtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 282  Q
    ||||| |||||| |||| || |||||| ||||||||| | |||||||||||| |||| |||||||    
T  9818593 gtataattttttatgttctccttggaataagttttatggaaagatgtaaaaataattctcattgg 9818529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 10720364 - 10720320
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||| ||||||||||||||||||||| || || |||||||    
T  10720364 ataaaagttggtcttttttgcttatattttgagaaaaagaaaatg 10720320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 282
Target Start/End: Complemental strand, 10720518 - 10720454
Alignment:
Q  218 gtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 282  Q
    ||||| |||||| |||| || |||||| ||||||||| | |||||||||||| |||| |||||||    
T  10720518 gtataattttttatgttctccttggaataagttttatggaaagatgtaaaaataattctcattgg 10720454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 19933211 - 19933255
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||| |||||||||||||||||||| || || |||||||    
T  19933211 ataaaagtttatcttttttgcttatattttgagataaagaaaatg 19933255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 19964350 - 19964394
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||| |||||||||||||||||||| || || |||||||    
T  19964350 ataaaagtttatcttttttgcttatattttgagataaagaaaatg 19964394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 22632030 - 22631986
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||| |||||||||||||||| | |||| |||||||    
T  22632030 ataaaagtttgtcctttttgcttatattttagaacaaagaaaatg 22631986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 409
Target Start/End: Complemental strand, 39348747 - 39348711
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  39348747 ataaaagttggtcttttttgcttatattttggtacaa 39348711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 41815849 - 41815893
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||  |||||||||||||||||||| ||||| |||||||    
T  41815849 ataaaagttgatcttttttgcttatattttgagacaaagaaaatg 41815893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 409
Target Start/End: Original strand, 43108062 - 43108098
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  43108062 ataaaagttggtcttttttgcttatattttgagacaa 43108098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 183; Significance: 8e-99; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 178 - 419
Target Start/End: Complemental strand, 21542588 - 21542346
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  21542588 aatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttt 21542489  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac-nnnnnnnntcttggaaaagataa 376  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||         | |||||||||||||    
T  21542488 attggctattggttatggaaaaaatgaaagaaaaagaaaattgaatgtaatttgcatttaatattatgagaataacaaaaaaaaatattggaaaagataa 21542389  T
Q  377 aagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  21542388 aagtttgtcttttttgcttatattttgggacaaagaaaatgtg 21542346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 178 - 419
Target Start/End: Original strand, 35129045 - 35129288
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaa-aaacaatttt 276  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  35129045 aatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaataaacaatttt 35129144  T
Q  277 cattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac-nnnnnnnntcttggaaaagata 375  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||         ||||||||||||||    
T  35129145 cattggttattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttacgagaataacaaaaaaaaatcttggaaaagata 35129244  T
Q  376 aaagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    |||||||||||||||||||| ||||||||||||| |||||||||    
T  35129245 aaagtttgtcttttttgcttgtattttgggacaaagaaaatgtg 35129288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 178 - 419
Target Start/End: Original strand, 3095711 - 3095954
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||| |||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3095711 aatcatatttattaagaaaactaaagcataaaaatttggagtatagttttttgtgttttctttggaaaa-gttttataggaagatgtaaaaacaattttc 3095809  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac---nnnnnnnntcttggaaaagat 374  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||           |||||||||||||    
T  3095810 attggctattgattatggaaaaaatgaaataaagagaaaattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaaaatcttggaaaagat 3095909  T
Q  375 aaaagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  3095910 aaaagtttgtcttttttgcttatattttgggacaaagaaaatgtg 3095954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 178 - 419
Target Start/End: Original strand, 34177632 - 34177874
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  34177632 aatcacacttattaagaaaattaaaacataagaatttggaatatagttttttgtgttttctttggaaaaaaatttatagggagatgtaaaaacaattttc 34177731  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac-nnnnnnnntcttggaaaagataa 376  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||         |||||||||||||||    
T  34177732 attggctattggttatggaaaaaatgaaagaaagagataattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaatcttggaaaagataa 34177831  T
Q  377 aagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    |||||||| |||||| |||||||||||| |||| |||||||||    
T  34177832 aagtttgtgttttttacttatattttggtacaaagaaaatgtg 34177874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 186 - 418
Target Start/End: Original strand, 11082244 - 11082477
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  11082244 ttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatagggagatgtaaaaacaattttcattggcta 11082343  T
Q  286 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac--nnnnnnnntcttggaaaagataaaagtttg 383  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||| ||||||||||||||||    
T  11082344 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaaatcttgaaaaagataaaagtttg 11082443  T
Q  384 tcttttttgcttatattttgggacaacgaaaatgt 418  Q
    |  |||||||||||||||||| |||| ||||||||    
T  11082444 t-gtttttgcttatattttggtacaaagaaaatgt 11082477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 7274866 - 7275040
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| ||||||||||||||||| || |||||||||||| |||||||||||| |||||| || ||||||||||||||||||||||    
T  7274866 aatcacacttattaagaaaactaaaacataagaatttgtagcatagttttttgtattttctttggaataagtttcatgggaagatgtaaaaacaattttc 7274965  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||| ||||||||||    
T  7274966 attggctattggttatggaaaaaatgaaagagagagaaaattaaatgtaatttgtatttaatttcatgagaataa 7275040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 30794183 - 30794357
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||| |||||||||||||| ||||| ||||||||||| |||||| |||||| |||||| ||||||| |||||||||||||||||||||||||| |||||    
T  30794183 aatcagatttattaagaaaactaaaatataagaatttgaagtataattttttatgttttatttggaataagttttataggaagatgtaaaaacatttttc 30794282  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||| ||||| |||||  |||| |||||||||| ||| ||||||||||||||||| ||||||||||    
T  30794283 attggctattggtgatggagaaaatagaagagagagaaaattaaatctaatttgcatttaatttcatgagaataa 30794357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 12461420 - 12461594
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagtttt-ataggaagatgtaaaaacaatttt 276  Q
    |||||||||||||||||||| |||||||| |||||||||| ||||||||||| | ||||||||| || ||||||| |||| |||||||||||||||||||    
T  12461420 aatcacatttattaagaaaactaaaacatgagaatttggaatatagtttttt-tattttctttgaaataagtttttatagaaagatgtaaaaacaatttt 12461518  T
Q  277 cattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||||||||||||||| |||||  |||| | |||||||||||||||||||| ||||||||| ||||||||||    
T  12461519 cattggctattggttatggagaaaatagaagagacagaaaattgaatgtaatttggatttaatttcatgagaataa 12461594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 17751735 - 17751909
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||  ||||||| |   || ||||||||||| |  ||    
T  17751735 aatcacacttattaagaaaattaaaatataagaatttggagtatagttttttgtgttttctttagattaagtttttttaaaaaatgtaaaaacagtgctc 17751834  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||| ||||||| |||||| |||| ||| |||||||||||||||||||||||| ||| || |||||||    
T  17751835 attggctattgattatggagaaaatggaagagagaaaaaattgaatgtaatttgcatttagtttcataagaataa 17751909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 218 - 352
Target Start/End: Complemental strand, 31107320 - 31107187
Alignment:
Q  218 gtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaa 317  Q
    |||||||||||||||||||||||| |||||  |||||| ||| |||||||||  ||||| |||| |||||| |||| |||||||||||||| | || |||    
T  31107320 gtatagttttttgtgttttctttgaaaaaaaatttataagaaaatgtaaaaatgatttttattgactattgattatagaaaaaatgaaagagaaag-aaa 31107222  T
Q  318 ttgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||||||||||||||| |||||||    
T  31107221 ttgaatgtaatttgcatttaattttataagaataa 31107187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 178 - 342
Target Start/End: Complemental strand, 4032158 - 4031991
Alignment:
Q  178 aatcacatttattaagaaaattaaaacata--agaa-tttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatt 274  Q
    ||||||| |||||||||||| |||||||||  || | |||| |  ||||||||||||||| |||||| || ||||||||| |||||||||||||||||||    
T  4032158 aatcacacttattaagaaaactaaaacatagtagtagtttgtaacatagttttttgtgttatctttgaaataagttttatcggaagatgtaaaaacaatt 4032059  T
Q  275 ttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    ||||||||   ||| |||| || ||||||||| | |||| |||||||||| | |||||||||||||||    
T  4032058 ttcattggtagttgattatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttt 4031991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 178 - 342
Target Start/End: Complemental strand, 4988115 - 4987947
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaa----tttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaat 273  Q
    ||||||||||||||| |||||||||| ||| | |    |||| |  ||||||||||||||| |||||| || |||||||||||||||||||||||| |||    
T  4988115 aatcacatttattaaaaaaattaaaatataggtagtagtttgtaacatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaataat 4988016  T
Q  274 tttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    |||||||||   ||| |||| || |||||||||   |||| |||||||||| | |||||||||||||||    
T  4988015 tttcattggtagttgattatagagaaaatgaaaatgagagcaaattgaatgcattttgcatttaatttt 4987947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 220 - 342
Target Start/End: Complemental strand, 16524505 - 16524384
Alignment:
Q  220 atagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaatt 319  Q
    ||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||   ||| |||| || ||||||||| | |||  |||||    
T  16524505 atagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcattggtagttgattatagagaaaatgaaa-agagaacaaatt 16524407  T
Q  320 gaatgtaatttgcatttaatttt 342  Q
    ||||| | |||||||||||||||    
T  16524406 gaatgcactttgcatttaatttt 16524384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 14573119 - 14573293
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    |||||||||||||||||||| ||||| ||| ||||||||||||||  ||||||| ||||||||| || |||| |||| ||| |||||||||| |||||||    
T  14573119 aatcacatttattaagaaaactaaaatatatgaatttggagtata-atttttgtattttctttgaaataagtattatgggatgatgtaaaaataattttc 14573217  T
Q  278 attggctattggttatggaaaaaatgaaagaaag-agaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||  | ||| ||||||| ||||||  ||| || | |||||| ||| ||||||  ||||||||| ||||| ||||    
T  14573218 attgtttgttgattatggagaaaatggtagagagaaaaaaatttaatataatttaaatttaatttcatgagtataa 14573293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 274 - 352
Target Start/End: Complemental strand, 9428844 - 9428766
Alignment:
Q  274 tttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||||||||||||||| |||||||| ||||| |||||||||| ||| ||||||||||| ||||||||||||||||    
T  9428844 tttcattggctattggttatagaaaaaataaaagagagagaaaattaaatataatttgcattaaattttatgagaataa 9428766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 220 - 338
Target Start/End: Original strand, 16013465 - 16013583
Alignment:
Q  220 atagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaatt 319  Q
    |||||||||||| || |||||| || |||||||||||||||||||||||||||||||||||||   ||| |||| || ||||||||| | |||| |||||    
T  16013465 atagttttttgtattatctttgaaataagttttataggaagatgtaaaaacaattttcattggtagttgattatagagaaaatgaaaaagagagcaaatt 16013564  T
Q  320 gaatgtaatttgcatttaa 338  Q
    ||||| | ||| |||||||    
T  16013565 gaatgcatttttcatttaa 16013583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 187 - 343
Target Start/End: Complemental strand, 17598450 - 17598294
Alignment:
Q  187 tattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctat 286  Q
    ||||||||||||||| || |||  |||||  ||||| ||||||||||| ||||||||| || |||||| | |||||||||||| |||| ||||||| ||     
T  17598450 tattaagaaaattaacacttaatgatttgaggtataattttttgtgttctctttggaataaattttatggaaagatgtaaaaataattctcattggttaa 17598351  T
Q  287 tggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
       ||||||| ||||| ||| | |||  |||||||||| ||||||||||||||||||    
T  17598350 aaattatggagaaaataaaaaagagaataaattgaatgcaatttgcatttaatttta 17598294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 220 - 342
Target Start/End: Complemental strand, 3888553 - 3888431
Alignment:
Q  220 atagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaatt 319  Q
    |||||| |||||||| | |||| || |||||||||||||||||||| ||||||||||||| ||   ||| |||| || ||||||||| | |||  |||||    
T  3888553 atagttatttgtgttatatttgaaataagttttataggaagatgtagaaacaattttcatgggtagttgattatagagaaaatgaaaaagagaacaaatt 3888454  T
Q  320 gaatgtaatttgcatttaatttt 342  Q
    ||||| | |||||||||||||||    
T  3888453 gaatgcactttgcatttaatttt 3888431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 276
Target Start/End: Original strand, 5822027 - 5822123
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 276  Q
    ||||| |||||||||||| ||||| || | | |||| |||||| ||| ||||||| ||||||||| |||||| |||| |||||||||||||||||||    
T  5822027 tcacacttattaagaaaactaaaatattatagtttgtagtataatttcttgtgttatctttggaataagtttcatagaaagatgtaaaaacaatttt 5822123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 9428915 - 9428857
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgtttt 236  Q
    ||||||||||||||| |||| ||||||||||||||||| |||||| |||||||||||||    
T  9428915 aatcacatttattaataaaactaaaacataagaatttgaagtataattttttgtgtttt 9428857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 307
Target Start/End: Original strand, 5881746 - 5881872
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||||||||||||||| | |||| || | | |||| |||||| ||| || |||| ||||||||  |||||| |||| ||||||||||||||||||| ||    
T  5881746 tcacatttattaagaaact-aaaatattatagtttgcagtataatttcttctgttatctttggactaagtttcatagaaagatgtaaaaacaattttaat 5881844  T
Q  280 tggctattggttatggaaaaaatgaaag 307  Q
    ||| ||||  |||| || ||||||||||    
T  5881845 tggttattaattatagagaaaatgaaag 5881872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 281
Target Start/End: Complemental strand, 15830863 - 15830760
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||||||||||| |||| |||||||||| | |||  |  ||| ||||||||||| | |||  || |||||| ||||||||||||||||| |||||||    
T  15830863 aatcacatttattaaaaaaactaaaacataatagtttctaacataattttttgtgttatttttaaaataagtttaataggaagatgtaaaaaaaattttc 15830764  T
Q  278 attg 281  Q
    ||||    
T  15830763 attg 15830760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 5300659 - 5300701
Alignment:
Q  246 aagttttataggaagatgtaaaaacaattttcattggctattg 288  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  5300659 aagttttataggaagatgtaaaaacaattttcattggttattg 5300701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 343
Target Start/End: Complemental strand, 21964082 - 21963958
Alignment:
Q  219 tatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaat 318  Q
    |||| ||||||||||| || ||  || ||||||||| | |||||||||||| |||||| ||||| ||||| | ||||| ||||| ||| | |||  ||||    
T  21964082 tataattttttgtgttctccttaaaataagttttatggaaagatgtaaaaataatttttattggttattgatcatggagaaaataaaaaagagaacaaat 21963983  T
Q  319 tgaatgtaatttgcatttaatttta 343  Q
    || ||| ||||| ||||||||||||    
T  21963982 tgtatgaaatttacatttaatttta 21963958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 341
Target Start/End: Original strand, 16870828 - 16870947
Alignment:
Q  223 gttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattg-gttatggaaaaaatgaaagaaagagaaaattga 321  Q
    |||||||||||| |||||  || |||||| |||| ||||| ||||| ||| ||| ||||| ||||  |||||  | ||||||||||  |||| ||| |||    
T  16870828 gttttttgtgttatctttaaaataagtttcatagaaagatttaaaatcaacttttattggttatttagttataaagaaaatgaaagggagagcaaaatga 16870927  T
Q  322 atgtaatttgcatttaattt 341  Q
    ||||||||| ||||||||||    
T  16870928 atgtaattttcatttaattt 16870947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 416
Target Start/End: Complemental strand, 30949094 - 30949051
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaat 416  Q
    ||||||||| ||||||||||||||||||||| ||||| ||||||    
T  30949094 ataaaagttagtcttttttgcttatattttgagacaaagaaaat 30949051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 417
Target Start/End: Original strand, 32882882 - 32882924
Alignment:
Q  375 aaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||| |||||||||||||||||||| |||||| |||||||    
T  32882882 aaaagttggtcttttttgcttatattttaggacaaagaaaatg 32882924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 1130480 - 1130435
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||| || ||||||||||||| |||||||||| |||||||    
T  1130480 gataaaagttggttttttttgcttataatttgggacaaagaaaatg 1130435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 409
Target Start/End: Complemental strand, 10227871 - 10227835
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  10227871 ataaaagttggtcttttttgcttatattttgagacaa 10227835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 377 - 409
Target Start/End: Complemental strand, 17598248 - 17598216
Alignment:
Q  377 aagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||| |||||||||||||||||||||||||||    
T  17598248 aagttggtcttttttgcttatattttgggacaa 17598216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 409
Target Start/End: Original strand, 17722007 - 17722043
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  17722007 ataaaagttggtcttttttgcttatattttgagacaa 17722043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 183; Significance: 8e-99; HSPs: 120)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 178 - 419
Target Start/End: Original strand, 39555577 - 39555819
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  39555577 aatcacacttattaagaaaattaaaacataagaatttggagtataggtttttgtgttttctttgaaaaaagttttatagaaagatgtaaaaacaattttc 39555676  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaat-aacnnnnnnnntcttggaaaagataa 376  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||        |||||||||||||||    
T  39555677 attggctattggttatggaaaaaatgaaagagagagaacattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcttggaaaagataa 39555776  T
Q  377 aagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  39555777 aagtttgtcttttttgcttatattttgggacaaagaaaatgtg 39555819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 178 - 419
Target Start/End: Original strand, 32623996 - 32624239
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  32623996 aatcacaattattaagaaaactaaaacataagaatttggagtgtagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttc 32624095  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa--cnnnnnnnntcttggaaaagata 375  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||    
T  32624096 attggccattggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaaatcttggaaaagata 32624195  T
Q  376 aaagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  32624196 aaagtttgtcttttttgcttatattttgggacaaagaaaatgtg 32624239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 188 - 419
Target Start/End: Original strand, 12448969 - 12449200
Alignment:
Q  188 attaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctatt 287  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  12448969 attaagaaaattaaaa-ataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggccatt 12449067  T
Q  288 ggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaat-aacnnnnnnnntcttggaaaagataaaagtttgtct 386  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||||    
T  12449068 ggttatggaaaaaatcaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcttggaaaagataaaagtttgtct 12449167  T
Q  387 tttttgcttatattttgggacaacgaaaatgtg 419  Q
    ||||||||||||||||||||||| |||||||||    
T  12449168 tttttgcttatattttgggacaaagaaaatgtg 12449200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 178 - 419
Target Start/End: Complemental strand, 24190639 - 24190399
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  24190639 aatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatacggagatgtaaaaacaattttc 24190540  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac-nnnnnnnntcttggaaaagataa 376  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||         |||||||||||||||    
T  24190539 attggctattggttatggaaaaaatgaaagaaagagaaaatt-aatgtaatttgcatttaattttatgagaataacaaaaaaaaatcttggaaaagataa 24190441  T
Q  377 aagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    ||||||||||||||| |||||||||||| |||| |||||||||    
T  24190440 aagtttgtctttttt-cttatattttggtacaaagaaaatgtg 24190399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 178 - 419
Target Start/End: Complemental strand, 2126208 - 2125965
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2126208 aatcacatttattaagaaaactaaaacataagaatttggaatatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 2126109  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaat-aac-nnnnnnnntcttggaaaagata 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||           ||  ||||||||    
T  2126108 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttaatgagaatgaacaaaaaaaaaatttaaaaaagata 2126009  T
Q  376 aaagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    |||||||||||||||| |||||||||| |||||| |||||||||    
T  2126008 aaagtttgtcttttttacttatattttaggacaaagaaaatgtg 2125965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 178 - 419
Target Start/End: Original strand, 43667294 - 43667533
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    |||||||||||||||||||||||| ||||||||||||  |||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  43667294 aatcacatttattaagaaaattaagacataagaatttaaagtataattttttgtgttttctttgaaaaaagttttataggaagacgtaaaaacaattttc 43667393  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataacnnnnnnnntcttggaaaagataaa 377  Q
    |||||| |||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||         ||||| ||||||||||    
T  43667394 attggccattggttatggaaaaaatgaaag--agagaaaattgaatgtaatttacatttaattttatgagaataaacaaaaaaatcttgaaaaagataaa 43667491  T
Q  378 agtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    |||||||||||||||||||||||||| ||||| |||||||||    
T  43667492 agtttgtcttttttgcttatattttgagacaaagaaaatgtg 43667533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 15959631 - 15959805
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15959631 aatcacatttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttc 15959730  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15959731 attggctattggttatggaaaaaattaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataa 15959805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 178 - 418
Target Start/End: Complemental strand, 35691562 - 35691320
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||     
T  35691562 aatcacatttattaagaaact-aaaacataagaatttggagtataattttttgtgttttctttgaaaaaagttttatagggagatgtaaaaacaattttt 35691464  T
Q  278 attggctattggttatggaa-aaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac--nnnnnnnntcttggaaaagat 374  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||| |||||||    
T  35691463 attggctattggttatggaaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaaatcttgaaaaagat 35691364  T
Q  375 aaaagtttgtcttttttgcttatattttgggacaacgaaaatgt 418  Q
    |||| ||| | |||||| |||||||||||| |||| ||||||||    
T  35691363 aaaaatttattttttttacttatattttggtacaaagaaaatgt 35691320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 6787008 - 6786834
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  6787008 aatcacacttattaagaaaactaaaacatgagaatttggagtatagttttttgtgttttctttggaaaaagttttatatgaagatgtaaacacaattttc 6786909  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||    
T  6786908 attggctattggttatggaaaaaatgaaagagagtgaaaattgaatgtagtttgcatttaattttatgagaataa 6786834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 186 - 418
Target Start/End: Original strand, 42965815 - 42966045
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    |||||||||||| |||||||||| |||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  42965815 ttattaagaaaactaaaacataaaaatttgaagtttagttttttgtgttttctttggaaaaa-ttttataggaagatgtaaaaacaattttcattggcta 42965913  T
Q  286 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataacnnnnnnnntcttggaaaagataaaagtttgtc 385  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||         ||||| |||| |||||||||||||    
T  42965914 ttggttatgg-aaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttataagaataaacaaaaaaatcttgaaaaaaataaaagtttgtc 42966012  T
Q  386 ttttttgcttatattttgggacaacgaaaatgt 418  Q
    |||||| ||| |||||||||||||  |||||||    
T  42966013 ttttttacttgtattttgggacaaataaaatgt 42966045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 181 - 352
Target Start/End: Complemental strand, 6785622 - 6785452
Alignment:
Q  181 cacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 280  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  6785622 cacacttattaagaaaactaaaacataagaatt-ggagtatagttttttgtgttttcttttgaaaaagttttatatgaagatgtaaaaacaattttcatt 6785524  T
Q  281 ggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  6785523 ggctattggttatggaaaaaatgaaagagagagaaaattgaatgtagtttgcatttaattttatgagaataa 6785452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 33369720 - 33369549
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  33369720 aatcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttggaaaaagttttatatg-agatgtaaaaacaattttc 33369622  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  33369621 attggctattggttatggaaaaaatgaaag--agagaaaattgaatgtaatttgcatttaattttatgagaataa 33369549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 178 - 406
Target Start/End: Original strand, 32983163 - 32983390
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||| |||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  32983163 aatcacacttattaagaaaactaaaacataaaaattggaagtatagttttttgtgttttctttggaaaa-gttttataagaagatgtaaaaacaattttc 32983261  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaat-aacnnnnnnnntcttggaaaagataa 376  Q
    |||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||        ||||  |||||||||    
T  32983262 attggc-attggttatggaaaaaatgaaagagagagaaaattgaatataatttgcatttaattttatgagaataaacaaaaaaattcttaaaaaagataa 32983360  T
Q  377 aagtttgtcttttttgcttatattttggga 406  Q
    || |||||||||||||||||||||||||||    
T  32983361 aaatttgtcttttttgcttatattttggga 32983390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 40718848 - 40718674
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||| ||||| ||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||| |||| |||| |||||||||||    
T  40718848 aatcacacttattacgaaaactaaaatataaaaatttggagtatagttttttgtgttttctttgaaaaaagttttatatgaagttgtagaaacaattttc 40718749  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40718748 attggctattggtaatagaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 40718674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 45226308 - 45226134
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||| ||||| |||||||||||| ||| ||||||||| ||||||||||||||||||| |||||||||||||||    
T  45226308 aatcacacttattaagaaaactaaaacataataatttagagtatagttttatgtattttctttgaaaaaagttttataggaagacgtaaaaacaattttc 45226209  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  45226208 attgactattggttatggaaaaaatgaaagagatagaaaattgaatgtaatttgcatttaattttatgagaataa 45226134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 28016737 - 28016909
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||||||||| ||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||    
T  28016737 aatcacacttattaagaaaactaaaacataagaatttagagtatagtttttggtgttttctttgaaaaatgttttataggaagatgtaaaaacaattttc 28016836  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||||  ||||||| ||||  |||||||||||||||||| ||||||||||||||||||||||||    
T  28016837 attggctattggttataaaaaaaataaaag--agagaaaattgaatgtaacttgcatttaattttatgagaataa 28016909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 180 - 402
Target Start/End: Original strand, 28120748 - 28120970
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    |||||||||||||||||| ||| | |||||||| ||||||||||||||||||||||| |||  ||  | |||||| ||||||||||||||||||||||||    
T  28120748 tcacatttattaagaaaactaagaaataagaatgtggagtatagttttttgtgttttttttaaaatgaattttatgggaagatgtaaaaacaattttcat 28120847  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaat-aacnnnnnnnntcttggaaaagataaaa 378  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||        |||| ||||||||||||    
T  28120848 tggctattgattatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgtgaataaacaaaagaaatctt-gaaaagataaaa 28120946  T
Q  379 gtttgtcttttttgcttatatttt 402  Q
    ||||||||||||| ||||||||||    
T  28120947 gtttgtcttttttacttatatttt 28120970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 178 - 344
Target Start/End: Original strand, 13136545 - 13136708
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||   ||||||||||||||||||||||||| |    
T  13136545 aatcacacttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttcttt-aaaaaaaaattataggaagatgtaaaaacaatttcc 13136643  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttat 344  Q
    ||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||    
T  13136644 attggctattggttatggaaaaaatgaaag--agagaaaattgaatataatttgcatttaattttat 13136708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 3076465 - 3076291
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||||||||||||||| |||||||||||| || ||||||||||||||||| ||||||| ||||||||| |||||||||||||| |||||||    
T  3076465 aatcacacttattaagaaaattaaagcataagaatttgtagcatagttttttgtgttttatttggaataagttttatgggaagatgtaaaaataattttc 3076366  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||| |||||||||||||||||| ||||  |||||||||| ||||||||||||||||||||| ||||||||||    
T  3076365 attggcaattggttatggaaaaaataaaagtgagagaaaattaaatgtaatttgcatttaatttcatgagaataa 3076291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 186 - 352
Target Start/End: Original strand, 7467961 - 7468128
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagta-tagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggct 284  Q
    |||||||||||| ||||||||||||||||| |||| || |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  7467961 ttattaagaaaactaaaacataagaatttgaagtaataattttttgtgttttctttggaaaaagttttaaaggaagatgtaaatacaattttcattggct 7468060  T
Q  285 attggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||| ||| |  |||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  7468061 attgattaagagaaaaatgaaagagatagaaaattgaatgtaatttgcatttaattttatgagaataa 7468128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 3875010 - 3875186
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||||||||  ||||||| ||| |||||||||||||||||| ||||||||||||||||     
T  3875010 aatcacacttattaagaaaagtaaaacataagaatttgaagtatagtttt--gtgtttttttttgaaaaagttttataggaatatgtaaaaacaattttt 3875107  T
Q  278 attggctat----tggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||||    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  3875108 attggctatatattggttatggaaaaaatgaaagagagagaaaattgaatgaaatttgcatttaattttatgagaataa 3875186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 178 - 302
Target Start/End: Complemental strand, 11241197 - 11241073
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  11241197 aatcacacttattaaaaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaccaattttc 11241098  T
Q  278 attggctattggttatggaaaaaat 302  Q
    |||||||||||||||||||||||||    
T  11241097 attggctattggttatggaaaaaat 11241073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 186 - 352
Target Start/End: Complemental strand, 1820577 - 1820411
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagtttt-ttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggct 284  Q
    |||||||||||| ||||||||||||||||||| ||||||||| ||||| ||| |||||||||||||||||||||||||||||||| ||| |||||| |||    
T  1820577 ttattaagaaaactaaaacataagaatttggaatatagttttattgtgctttttttggaaaaagttttataggaagatgtaaaaa-aatattcattagct 1820479  T
Q  285 attggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
     ||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  1820478 tttggttatgaaaaaaatgaaagagagaaaaaattgaatgtaatttgcatttaattttatgagaataa 1820411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 46543152 - 46542980
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||| ||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||| |||||  |||||||||||||| ||||||||||| |    
T  46543152 aatcatatttattaaaaaaactaaaacataaaaatttggagtatagttttttgtgttttctttgaaaaaaaatttataggaagatgaaaaaacaatttcc 46543053  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||||||||| |||| ||||||||||  |||||||||| |||| |||||||||||||||||||||||||||    
T  46543052 attggctattggttgtggagaaaatgaaag--agagaaaattaaatgcaatttgcatttaattttatgagaataa 46542980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 181 - 352
Target Start/End: Original strand, 47600030 - 47600204
Alignment:
Q  181 cacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttt--tctttggaaaa-agttttataggaagatgtaaaaacaattttc 277  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||| ||| |  ||||   |||| |||||||||||||||||||||||||||||||    
T  47600030 cacatttattaaaaaaattaaaacataagaatttagagtatagttttttttgtgtaatcttaaaaaaaaagttttataggaagatgtaaaaacaattttc 47600129  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||| ||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  47600130 attggctattgtttatgaaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttatgagaataa 47600204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 191 - 352
Target Start/End: Original strand, 39932576 - 39932737
Alignment:
Q  191 aagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggt 290  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||  || |||||||||| |||||| ||||||||||||| |||||||||||||    
T  39932576 aagaaaactaaaacataagaatttggagtatagttttttgtgttttttttttaataagttttataagaagatataaaaacaatttttattggctattggt 39932675  T
Q  291 tatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
     ||||| ||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  39932676 catggagaaaataaaagagagagaaaattgaatgtaatttgtatttaattttatgagaataa 39932737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 181 - 352
Target Start/End: Original strand, 47014487 - 47014655
Alignment:
Q  181 cacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 280  Q
    |||| ||| |||| ||| |||||||||||||| |||||||  ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||    
T  47014487 cacacttactaagtaaactaaaacataagaatctggagta--gttttttgtgttttcgttgaaaaaagttttataggaaaatgtaaaaacaattttcatt 47014584  T
Q  281 ggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    | |||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||    
T  47014585 gactattggttatggaaaaaatgaaagagagagaaaattgaatgt-atttacatttaattttatgagaataa 47014655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 24728617 - 24728792
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagtttt-ttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 276  Q
    ||||||| |||||||||||| ||||||||||||||||| || |||||||| ||||||||||||| ||| |||||| || |||||||||||||||||||||    
T  24728617 aatcacacttattaagaaaactaaaacataagaatttgtagcatagtttttttgtgttttctttcgaataagtttcatgggaagatgtaaaaacaatttt 24728716  T
Q  277 cattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||| |||| ||||||||||||| ||||| |||||||||| ||||||||||||||||||||| | ||||||||    
T  24728717 cattggcaattgattatggaaaaaataaaagagagagaaaattaaatgtaatttgcatttaatttcacgagaataa 24728792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 177 - 352
Target Start/End: Original strand, 46818492 - 46818667
Alignment:
Q  177 taatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 276  Q
    |||| ||| ||||||||||||  |||||||||||||||  ||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||    
T  46818492 taattacacttattaagaaaagaaaaacataagaatttaaagtatagttttttgtattttctttgaaaaaagttttataggaagatataaaaacaatttt 46818591  T
Q  277 cattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||| | |||||||| |||||||||   |||||||| |||| |||||||| ||||||||||||||||||||    
T  46818592 cattggctaatagttatggagaaaatgaaattgagagaaaactgaacgtaatttgtatttaattttatgagaataa 46818667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 44148827 - 44148997
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||| ||||| |||| |||||||||||| || ||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||    
T  44148827 aatcacacttattacgaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattttc 44148926  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||| ||||||||||||||||||  |||  |||||||||| || |||||||||||||||||| ||||||||||    
T  44148927 attggcaattggttatggaaaaaat--aag--agagaaaattaaacgtaatttgcatttaatttcatgagaataa 44148997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 33431729 - 33431557
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| || | |||||||||||| || ||||||||||||||||| |||  |||||||||||||||| |||| |||||||||||||    
T  33431729 aatcacacttattaagaaaactagatcataagaatttgtagcatagttttttgtgtttttttttaaaaaagttttataggaggatggaaaaacaattttc 33431630  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||||||||||| || ||||||||||  |||||||||| ||||||||||| |||| |||||||||||||||    
T  33431629 attggctattggttatagagaaaatgaaag--agagaaaattaaatgtaatttgtatttcattttatgagaataa 33431557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 199 - 352
Target Start/End: Original strand, 2246026 - 2246179
Alignment:
Q  199 taaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaa 298  Q
    |||||||| | ||||| |||||||||||||||||||||||||| || |||||||||||||| ||||||||| ||||||||||||||||| ||| |||  |    
T  2246026 taaaacattaaaatttagagtatagttttttgtgttttctttgaaataagttttataggaatatgtaaaaagaattttcattggctattcgttgtgggga 2246125  T
Q  299 aaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    || || |||| |||||||||| ||||||||||||||||||||||||||||||||    
T  2246126 aagtggaagagagagaaaattaaatgtaatttgcatttaattttatgagaataa 2246179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 199 - 352
Target Start/End: Original strand, 37735395 - 37735548
Alignment:
Q  199 taaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaa 298  Q
    |||||||||||||| || ||||||||||||||| |||||||||||| |||||| || |||||| |||||||||||||| ||||||||||| ||||||| |    
T  37735395 taaaacataagaatctgaagtatagttttttgtattttctttggaataagtttcatgggaagaagtaaaaacaatttttattggctattgattatggaga 37735494  T
Q  299 aaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||| || | |||||||||||||||||||||||||||||||| ||| ||||||    
T  37735495 aaatggaaaagagagaaaattgaatgtaatttgcatttaatttcatgtgaataa 37735548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 191 - 352
Target Start/End: Original strand, 3861699 - 3861858
Alignment:
Q  191 aagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggt 290  Q
    ||||||| |||||||||| |||||| |||||| |||||| |||||||||| ||| ||||||||| | ||||||||||||||||||||||||||||||| |    
T  3861699 aagaaaactaaaacataataatttgaagtataattttttatgttttctttagaataagttttattgaaagatgtaaaaacaattttcattggctattgat 3861798  T
Q  291 tatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||| ||||||||||||  ||| |||||| ||| |||||||||||||||||||| |||||||    
T  3861799 tatgaaaaaaatgaaag-gaga-aaaattaaatataatttgcatttaattttataagaataa 3861858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 178 - 302
Target Start/End: Complemental strand, 52985103 - 52984979
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||| |  ||||||||||||||||||||||    
T  52985103 aatcacacttattaagaaaactaatacataagaatttggagtatagttttttgtgttttctttggaataagtttcacgggaagatgtaaaaacaattttc 52985004  T
Q  278 attggctattggttatggaaaaaat 302  Q
    ||||||||||| ||| ||| |||||    
T  52985003 attggctattgattagggataaaat 52984979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 1035025 - 1034854
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||  ||||||||||||||| |||||||||  |||||| ||||||||||||||    
T  1035025 aatcacatttattaagaaaattaaaacataagaatttggcgtattgtttt--gtgttttctttggaataagttttatgagaagatataaaaacaattttc 1034928  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    || | ||||||||||  || |||||  | || | | |||||||||||||||| ||||||||||| ||||||||||    
T  1034927 atcgactattggttacagagaaaatagatgaga-aaaaaattgaatgtaattcgcatttaatttcatgagaataa 1034854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 178 - 336
Target Start/End: Original strand, 7875931 - 7876091
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagtttt--ataggaagatgtaaaaacaattt 275  Q
    ||||||| |||||||||||||||||| |||| |||||| | ||||||||||||||||||||||| |     ||||  |||| |||||||||||| |||||    
T  7875931 aatcacacttattaagaaaattaaaatataaaaatttgaattatagttttttgtgttttctttgaatttttttttttatagaaagatgtaaaaataattt 7876030  T
Q  276 tcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcattt 336  Q
    | |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  7876031 ttattgactattggttatggaaaaaataaaagagagagaaaattgaatgtaatttgcattt 7876091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 178 - 327
Target Start/End: Original strand, 32742193 - 32742342
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||||| |||| |||| ||||||||||| |||||||||||||||||||||||||  |||||||||||||  || || ||||||||||||||    
T  32742193 aatcacacttattaaaaaaactaaagcataagaattttgagtatagttttttgtgttttctttaaaaaaagttttataaaaaaatataaaaacaattttc 32742292  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaa 327  Q
    |||    |||| |||||||||||||||||||||||||||||| |||||||    
T  32742293 attaatcattgattatggaaaaaatgaaagaaagagaaaattaaatgtaa 32742342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 227 - 351
Target Start/End: Original strand, 10558796 - 10558920
Alignment:
Q  227 tttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgta 326  Q
    |||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| ||||||| |||||| |||| ||| |||||| ||||||    
T  10558796 tttgtgttttctttggaataatttttatgggaagatgtaaaaacaattttcattggctattgattatggagaaaatggaagagagaaaaaatttaatgta 10558895  T
Q  327 atttgcatttaattttatgagaata 351  Q
    |||| |||||||||| |||||||||    
T  10558896 atttacatttaatttcatgagaata 10558920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 238 - 349
Target Start/End: Complemental strand, 16854250 - 16854139
Alignment:
Q  238 tttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcattta 337  Q
    |||| |||||||||||| ||||| ||||||||||||||| ||||||||||||||||||| ||||||||||| ||| |||||| |||||||||||||||||    
T  16854250 tttgaaaaaagttttattggaaggtgtaaaaacaatttttattggctattggttatggagaaaatgaaagagagataaaattaaatgtaatttgcattta 16854151  T
Q  338 attttatgagaa 349  Q
    ||||||||||||    
T  16854150 attttatgagaa 16854139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 50370120 - 50369954
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||||||||||| |||||||||| ||||||||||| ||||| ||||||||            |||||||||||||||||||||||||||||||||      
T  50370120 aatcacatttattaaaaaaattaaaatataagaatttgaagtattgttttttga-----------aaaaagttttataggaagatgtaaaaacaatttct 50370032  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatg----taatttgcatttaattttatgagaataa 352  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||    ||||||| ||||||||||||||||||||    
T  50370031 attggctattggttat-gaaaaaatgaaagagagagaaaattgaatgtaattaatttgtatttaattttatgagaataa 50369954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 232 - 352
Target Start/End: Original strand, 23392211 - 23392330
Alignment:
Q  232 gttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttg 331  Q
    ||||||||||||| ||||||||||| || || |||||| ||||||||||| |||||||||||||| |||||| ||||||||||||||| |||||||||||    
T  23392211 gttttctttggaataagttttatagaaaaatataaaaataattttcattgactattggttatggagaaaatggaagaaagagaaaatt-aatgtaatttg 23392309  T
Q  332 catttaattttatgagaataa 352  Q
    |||||||||| ||||||||||    
T  23392310 catttaatttcatgagaataa 23392330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 205 - 352
Target Start/End: Complemental strand, 43765438 - 43765290
Alignment:
Q  205 ataagaatttggagtatagtttttt-gtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatg 303  Q
    |||| |||||| ||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||| |||||||||| |||| |||||| | ||||||    
T  43765438 ataaaaatttgtagtatagtttttttgtgttttctttagaataagttttataggaagatgtaaaaacatttttcattggttatttgttatgcagaaaatg 43765339  T
Q  304 aaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
     |||| | |||||||||||| |||||||||| ||||||  |||||||||    
T  43765338 gaagagaaagaaaattgaatttaatttgcatctaatttcgtgagaataa 43765290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 182 - 352
Target Start/End: Original strand, 47302903 - 47303071
Alignment:
Q  182 acatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 281  Q
    |||||| ||||||||| ||||| ||||||| |||||||||| ||||  ||||||| || |||| |||||| ||||||||||||||||  |||||||||||    
T  47302903 acatttgttaagaaaactaaaatataagaaattggagtataatttt--gtgtttttttaggaataagtttcataggaagatgtaaaat-aattttcattg 47302999  T
Q  282 gctattggttatggaaaaaatgaaagaaag-agaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||| ||||| | ||||||||| |||  |||||| ||||||||||||||||||||||| ||||||||||    
T  47303000 gctattgattatgtagaaaatgaaaaaaaatagaaaactgaatgtaatttgcatttaatttcatgagaataa 47303071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 247 - 352
Target Start/End: Original strand, 6787050 - 6787154
Alignment:
Q  247 agttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatga 346  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||| ||||| ||    
T  6787050 agttttataggaagatgtaaaaataatttttattggctattggttatggaaaaaatgaaagagagag-aaattgaatgtagtttgcatttatttttacga 6787148  T
Q  347 gaataa 352  Q
    ||||||    
T  6787149 gaataa 6787154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 205 - 352
Target Start/End: Complemental strand, 25391824 - 25391680
Alignment:
Q  205 ataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatga 304  Q
    ||||||||||| |||||| ||||||||||||||||| || || |||||||| ||| ||||||||||||||||||||||||| | ||||||| | || ||     
T  25391824 ataagaatttgaagtataattttttgtgttttctttagataa-gttttatatgaaaatgtaaaaacaattttcattggctaatagttatgg-agaagtgg 25391727  T
Q  305 aagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||| | | |||||||||||||||||||||||||||||||||||||||    
T  25391726 aagagata-aaaattgaatgtaatttgcatttaattttatgagaataa 25391680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 220 - 342
Target Start/End: Original strand, 5858404 - 5858526
Alignment:
Q  220 atagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaatt 319  Q
    ||||||| ||||||| || ||| || ||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||| | |||| |||||    
T  5858404 atagtttcttgtgttatccttgaaataagttttataggaagatataaaaacaattttcattggctattggttattgagaaaatgaaacagagagcaaatt 5858503  T
Q  320 gaatgtaatttgcatttaatttt 342  Q
    ||||| | |||||||||||||||    
T  5858504 gaatgcactttgcatttaatttt 5858526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 188 - 302
Target Start/End: Complemental strand, 30221885 - 30221771
Alignment:
Q  188 attaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctatt 287  Q
    |||||||||||||||||||||||| ||||| |||| |||||||||||||||||  || ||||||||| |||||||||||||||| |||| ||||| ||||    
T  30221885 attaagaaaattaaaacataagaacttggaatataattttttgtgttttctttaaaataagttttatgggaagatgtaaaaacattttttattggatatt 30221786  T
Q  288 ggttatggaaaaaat 302  Q
    ||||||||| |||||    
T  30221785 ggttatggagaaaat 30221771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 178 - 342
Target Start/End: Complemental strand, 7397876 - 7397712
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||||| |||| ||||| |||  | |||| |  ||||||||||||||| |||||| || || |||||||||||||||||||||||||||||    
T  7397876 aatcacacttattaaaaaaactaaaatatagtagtttgtaacatagttttttgtgttatctttgaaataaattttataggaagatgtaaaaacaattttc 7397777  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    |||||   ||| |||| || ||||||||| |||||| |||||||||| | |||||||||||||||    
T  7397776 attggtatttgattatagagaaaatgaaaaaaagagcaaattgaatgcactttgcatttaatttt 7397712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 178 - 342
Target Start/End: Complemental strand, 16688306 - 16688142
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||||  ||||||||||||||  | |||| |  |||||||||| |||| | |||| || ||||||||||||||||||||||||||||||||    
T  16688306 aatcacacttattagaaaaattaaaacatagtagtttgtaacatagttttttatgttatttttgaaataagttttataggaagatgtaaaaacaattttc 16688207  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    ||||| | |||||||| || ||||||||||||| || | ||| |||| | |||||||||||||||    
T  16688206 attggttgttggttattgagaaaatgaaagaaaaagcatattaaatgaactttgcatttaatttt 16688142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 178 - 342
Target Start/End: Complemental strand, 37538979 - 37538815
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||||||||| |||  | |||| |  ||||||| ||||||| || ||| || |||||||||||||||||||||| |||||||||    
T  37538979 aatcacacttattaagaaaattaaaatatagtagtttgcaacatagtttcttgtgttatccttgaaataagttttataggaagatgtaaagacaattttc 37538880  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    ||||| | |||||||| || |||||||||||  ||| |||||||||| | |||||| ||||||||    
T  37538879 attggttgttggttatcgagaaaatgaaagagggagcaaattgaatgcactttgcagttaatttt 37538815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 178 - 342
Target Start/End: Original strand, 45840057 - 45840220
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||| | |||| |  ||||||||||||||| | |||| || | |||||||||||||||| |||||||||||||    
T  45840057 aatcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatttttgaaatatgttttataggaagatg-aaaaacaattttc 45840155  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    |||||   ||| |||| |||||||||||| | |||| |||||||||| | |||||||||||||||    
T  45840156 attggtagttgattatagaaaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttt 45840220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 178 - 330
Target Start/End: Original strand, 298659 - 298812
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataaga--atttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattt 275  Q
    ||||| |||||||||||||| |||||||||| |  | ||| ||||||||||  |||||||||||| ||| |||||| || ||||||||||||||  ||||    
T  298659 aatcatatttattaagaaaactaaaacataaaataacttgaagtatagtttgatgtgttttctttagaataagttt-atgggaagatgtaaaaattattt 298757  T
Q  276 tcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaattt 330  Q
    | ||||||||||| ||||||| |||||| ||||||||||||||| ||||||||||    
T  298758 taattggctattgattatggagaaaatggaagaaagagaaaattaaatgtaattt 298812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 220 - 342
Target Start/End: Complemental strand, 5950567 - 5950445
Alignment:
Q  220 atagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaatt 319  Q
    ||||||| ||||||| || ||| || |||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||| |||| |||||    
T  5950567 atagtttcttgtgttatccttgaaataagttttataggaagatgtaaaaacaattttcattggtcattggttattgaaaaaatgaaagagagagcaaatt 5950468  T
Q  320 gaatgtaatttgcatttaatttt 342  Q
     |||| | ||| |||||||||||    
T  5950467 aaatgcactttacatttaatttt 5950445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 178 - 314
Target Start/End: Original strand, 32318551 - 32318687
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaa-aagttttataggaagatgtaaaaacaatttt 276  Q
    ||||||| ||||||| |||||||||| |||| ||||||||||||| |||||| | |||| |||  ||| ||||||||| |||||||||||||||||||||    
T  32318551 aatcacaattattaa-aaaattaaaatataaaaatttggagtataattttttcttttttgtttttaaataagttttattggaagatgtaaaaacaatttt 32318649  T
Q  277 cattggctattggttatggaaaaaatgaaagaaagaga 314  Q
    |||||| ||||||||||||| ||||||| ||| |||||    
T  32318650 cattggttattggttatggagaaaatgagagagagaga 32318687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 50012749 - 50012587
Alignment:
Q  178 aatcacatttattaagaaaa-ttaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 276  Q
    ||||||| ||||||| |||| |||||| ||| |||||||||||||||||||||||||||||||             ||||||| || |||||| ||||||    
T  50012749 aatcacacttattaaaaaaaattaaaatataggaatttggagtatagttttttgtgttttcttc------------ataggaatatataaaaataatttt 50012662  T
Q  277 cattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||| |||| ||||| |||||||| ||||| | ||||||||||||||||||||||||||||||||| |||||||    
T  50012661 cattgg-tattagttatagaaaaaataaaagagaaagaaaattgaatgtaatttgcatttaattttataagaataa 50012587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 180 - 341
Target Start/End: Original strand, 52841438 - 52841599
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    |||||||||||||||||| ||||||| || | |||| |||||||||| |||| || || ||  || |||||| |||| ||||||| ||||||||||||||    
T  52841438 tcacatttattaagaaaactaaaacacaatagtttgtagtatagtttcttgtcttatccttaaaataagtttcatagaaagatgttaaaacaattttcat 52841537  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattt 341  Q
    ||| |||| ||||| |  |||||||||| ||||| ||| ||| || |||||||| |||||||    
T  52841538 tggttattagttatagggaaaatgaaaggaagagcaaaatgattgcaatttgcacttaattt 52841599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 178 - 282
Target Start/End: Complemental strand, 50176692 - 50176588
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    |||||||||||||||||||| |||||||||  | |||| |  ||||||||||||||| |||||| || || ||||||||||||||||||||||||||||     
T  50176692 aatcacatttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttgaaataaattttataggaagatgtaaaaacaattttt 50176593  T
Q  278 attgg 282  Q
    |||||    
T  50176592 attgg 50176588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 181 - 255
Target Start/End: Complemental strand, 4672998 - 4672924
Alignment:
Q  181 cacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttata 255  Q
    |||| |||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  4672998 cacacttattaagaaaactaaaatataagaatttggagtatagttttttgtattttctttgaaaaaagttttata 4672924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 219 - 342
Target Start/End: Original strand, 8889729 - 8889845
Alignment:
Q  219 tatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaat 318  Q
    |||||||| ||||||| || ||| || ||||||||||||||||||||||||||||||||       ||||||||| || ||||||||||| |||||||||    
T  8889729 tatagtttattgtgttatccttgaaataagttttataggaagatgtaaaaacaattttc-------attggttattgagaaaatgaaagagagagaaaat 8889821  T
Q  319 tgaatgtaatttgcatttaatttt 342  Q
    |||||| | ||| |||||||||||    
T  8889822 tgaatgcactttacatttaatttt 8889845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 186 - 342
Target Start/End: Original strand, 25185302 - 25185459
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagtttt-ttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggct 284  Q
    |||||||||||| |||||||||  | |||| |  |||||||| ||||||| |||||| || ||||||||||||||||||| ||||||| |||||||||      
T  25185302 ttattaagaaaactaaaacatagtagtttgtaacatagtttttttgtgttatctttgaaataagttttataggaagatgtgaaaacaactttcattggta 25185401  T
Q  285 attggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
     ||| |||| || ||||||||| | |||  |||||||||| | |||||||||||||||    
T  25185402 gttgattatagagaaaatgaaaaagagaacaaattgaatgcactttgcatttaatttt 25185459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 178 - 326
Target Start/End: Original strand, 30701376 - 30701524
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||||| |||| |||||||||  | |||| |  ||| ||||||||||| |||||| || ||||||||||||||||||| |||| |||||||    
T  30701376 aatcacacttattaaaaaaactaaaacatagtagtttgtaacataattttttgtgttatctttgaaataagttttataggaagatgtgaaaataattttc 30701475  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgta 326  Q
    |||||   ||| |||| || ||||||||| | |||| ||||||||||||    
T  30701476 attggtagttgattatagagaaaatgaaaaagagagcaaattgaatgta 30701524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 186 - 342
Target Start/End: Original strand, 35366202 - 35366358
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    |||||||||||| |||||||||  | |||| |  ||||||| ||||||| || ||| || || |||||||| ||||||||||||||||||| ||||| ||    
T  35366202 ttattaagaaaactaaaacatagtagtttgcaacatagtttcttgtgttatcgttgaaataaattttatagaaagatgtaaaaacaattttaattggtta 35366301  T
Q  286 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    |||||||| ||  |||||| ||| | || |||||||||| | |||| ||||||||||    
T  35366302 ttggttattgatcaaatgatagagatagcaaattgaatgcactttgaatttaatttt 35366358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 220 - 342
Target Start/End: Original strand, 44510252 - 44510374
Alignment:
Q  220 atagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaatt 319  Q
    ||||||||||||||| | |||| || || |||||||||||| ||||||||||||||||||||   |||| |||| || |||||||||   |||| |||||    
T  44510252 atagttttttgtgttatttttgaaataaattttataggaagttgtaaaaacaattttcattgataattgattatagagaaaatgaaaaggagagcaaatt 44510351  T
Q  320 gaatgtaatttgcatttaatttt 342  Q
    ||||| | |||||||||||||||    
T  44510352 gaatgcactttgcatttaatttt 44510374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 178 - 342
Target Start/End: Complemental strand, 41063912 - 41063747
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaag-ttttataggaagatgtaaaaacaatttt 276  Q
    ||||||| ||||||||||||  ||||||||  | |||| |  ||||||||||||||| |  ||  || ||| |||||||| |||||||||||| ||||||    
T  41063912 aatcacacttattaagaaaaccaaaacatagtagtttgcaacatagttttttgtgttattcttaaaataagcttttatagaaagatgtaaaaataatttt 41063813  T
Q  277 cattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    |||||| |||| ||||| || ||||| ||||| |||  |||||||||| | |||||||||||||||    
T  41063812 cattggttatttgttattgagaaaatcaaagagagaacaaattgaatgcactttgcatttaatttt 41063747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 268 - 334
Target Start/End: Complemental strand, 14087030 - 14086966
Alignment:
Q  268 aacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcat 334  Q
    |||||||||||||||||||| |||||||||||||| ||||  |||||||||||||||||||||||||    
T  14087030 aacaattttcattggctattagttatggaaaaaataaaag--agagaaaattgaatgtaatttgcat 14086966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 36384092 - 36383929
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| ||||||||||| ||||||||| | ||||||   |||| ||||||||||| | ||||||| || ||| || | ||||| ||||||||||| ||||    
T  36384092 tcacacttattaagaaagttaaaacattataatttgagatataattttttgtgttatttttggaataaatttcatggaaagatataaaaacaattatcat 36383993  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    |||||| |  ||||||| ||||| |||   | |  |||||||||| ||||||||||||||||||    
T  36383992 tggctaattattatggagaaaataaaaaggaaaacaaattgaatgcaatttgcatttaatttta 36383929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 178 - 343
Target Start/End: Complemental strand, 25990914 - 25990749
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    |||||||||||||||||||| ||| || ||   |||||  ||||| ||||||||||| || |||||| |||||| || | || ||||||||| |||||||    
T  25990914 aatcacatttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaatatgtaaaaataattttc 25990815  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||||| ||    ||||||| ||||| |||   |||  |||||||||| ||||||||||||||||||    
T  25990814 attggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 25990749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 340
Target Start/End: Complemental strand, 47026736 - 47026655
Alignment:
Q  260 gatgtaaaaacaattttcattggcta-ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatt 340  Q
    |||||| ||| ||||||||||||||| ||||||| ||||||||||||||| | | ||| |||||||||||||||||||||||    
T  47026736 gatgtataaataattttcattggctaattggttaaggaaaaaatgaaagagaaaaaaatttgaatgtaatttgcatttaatt 47026655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 342
Target Start/End: Complemental strand, 15912300 - 15912204
Alignment:
Q  246 aagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    ||||||||||||||||||||||||||||||||||||  | ||| |||  || |||||||||   |||| |||||||||| | |||||||||||||||    
T  15912300 aagttttataggaagatgtaaaaacaattttcattgattgttgattacagagaaaatgaaaaggagagcaaattgaatgcagtttgcatttaatttt 15912204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 344
Target Start/End: Original strand, 28916511 - 28916675
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| ||| || ||   |||||  ||||| ||||||||||| |  |||||| |||||| || | |||||||||||| |||||||||    
T  28916511 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttcttcttggaataagtttcatggaaagatgtaaaaataattttcat 28916610  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttat 344  Q
    ||| ||    ||||||| ||||| |||  ||||  |||||||||| |||||||||||||||||||    
T  28916611 tggttaaaaattatggagaaaataaaaagaagaacaaattgaatgcaatttgcatttaattttat 28916675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 243 - 342
Target Start/End: Complemental strand, 13351785 - 13351686
Alignment:
Q  243 aaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    ||||||||||||||||||||||||||||||||||||||||   ||| |||| || |||||||||   |||  |||||||||| | |||||||||| ||||    
T  13351785 aaaaagttttataggaagatgtaaaaacaattttcattggtagttgattatagagaaaatgaaaaggagaacaaattgaatgcactttgcatttagtttt 13351686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 23873823 - 23873986
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| ||| || ||   |||||  ||||| ||||||||||| || |||||| |||||| || | |||||||||||| |||||||||    
T  23873823 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattttcat 23873922  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| ||    ||||||| ||||| ||| | |||  ||||| |||| ||||||||||||||||||    
T  23873923 tggttaaaaattatggagaaaataaaaaagagaacaaattaaatgcaatttgcatttaatttta 23873986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 6786781 - 6786736
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  6786781 gataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 6786736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 372 - 417
Target Start/End: Original strand, 7468170 - 7468215
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  7468170 gataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 7468215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 372 - 417
Target Start/End: Original strand, 28016961 - 28017006
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  28016961 gataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 28017006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 44149050 - 44149094
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  44149050 ataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 44149094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 296 - 352
Target Start/End: Complemental strand, 50665315 - 50665259
Alignment:
Q  296 aaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||| |||||||||| ||||||||||||| ||||||| ||||||||||    
T  50665315 aaaaaatgaaagagagagaaaattaaatgtaatttgcaattaatttcatgagaataa 50665259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 417
Target Start/End: Original strand, 15959855 - 15959902
Alignment:
Q  370 aagataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||    
T  15959855 aagataaaaatttgtcttttttgcttatattttgggacaaagaaaatg 15959902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 263 - 342
Target Start/End: Original strand, 34102049 - 34102127
Alignment:
Q  263 gtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    |||||||||||||||||||| |||||||||| || ||| ||||||| |||| |||||| ||| | |||||||||||||||    
T  34102049 gtaaaaacaattttcattggttattggttattgagaaagtgaaagagagagcaaattg-atgcactttgcatttaatttt 34102127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 38942437 - 38942600
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| ||| || ||   |||||  ||||| ||||||||||| || |||||| |||||| || | |||||||||||| |||||||||    
T  38942437 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattttcat 38942536  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| ||    ||||||| ||||| |||   |||  |||||||||| || |||||||||||||||    
T  38942537 tggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaacttgcatttaatttta 38942600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 46949485 - 46949322
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    |||||||||||||||||| ||| || ||   |||||   |||| ||||||||||| || |||||| |||||| || | |||||||||||| |||||||||    
T  46949485 tcacatttattaagaaaactaacacttagtgatttgagatataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattttcat 46949386  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| ||    ||||||| ||||| |||   |||  |||||||||  ||||||||||||||||||    
T  46949385 tggttaaaaattatggagaaaataaaaaggagaacaaattgaatacaatttgcatttaatttta 46949322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 417
Target Start/End: Original strand, 6787208 - 6787253
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||||||||||||||||||||||||| || |||||||    
T  6787208 gataaaagtttgtcttttttgcttatattttgggataaagaaaatg 6787253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 342
Target Start/End: Complemental strand, 16661639 - 16661521
Alignment:
Q  224 ttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagaga--aaattga 321  Q
    ||||||||||| |||||| || |||||| |||||| ||||||||||||||||| |||||   ||| || | || ||||||||| |||||||  |||||||    
T  16661639 ttttttgtgttatctttgaaataagttt-ataggaggatgtaaaaacaatttttattggtagttgattctagagaaaatgaaa-aaagagaacaaattga 16661542  T
Q  322 atgtaatttgcatttaatttt 342  Q
    ||| | |||||||||||||||    
T  16661541 atgcactttgcatttaatttt 16661521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 218 - 343
Target Start/End: Complemental strand, 40220182 - 40220057
Alignment:
Q  218 gtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaa 317  Q
    ||||| ||||||||||| || |||||| |||||| || | |||||||||||| |||| ||||||| ||    ||||||| ||||| |||   |||  |||    
T  40220182 gtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcattggttaaaaattatggagaaaataaaaaggagaacaaa 40220083  T
Q  318 ttgaatgtaatttgcatttaatttta 343  Q
    ||||||| ||||||||||||||||||    
T  40220082 ttgaatgcaatttgcatttaatttta 40220057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 341
Target Start/End: Complemental strand, 42724262 - 42724101
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| ||| |||||||| |||||||| |  ||||| |||||||||| || |||| |  ||| ||  ||||| |   |||||||||||||||||||| ||    
T  42724262 tcacacttactaagaaaactaaaacattatcatttgaagtatagtttcttctgttcttcttgaaattagtttcacgagaagatgtaaaaacaatttttat 42724163  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattt 341  Q
    | | |||| |||||| | ||||||| ||  |||| ||||| |||| ||||||||||||||||    
T  42724162 tagttatttgttatgaagaaaatgatagggagagcaaattaaatgcaatttgcatttaattt 42724101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 35884375 - 35884212
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    |||||||||||||||||| |||  | ||  ||||||  ||||| ||||||||||| | |||| || || |||||| | |||||||||||| |||||||||    
T  35884375 tcacatttattaagaaaactaactcttagtaatttgaggtataattttttgtgttctttttgaaataaattttatggaaagatgtaaaaataattttcat 35884276  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| ||    |||| || ||||| |||  ||||  | ||| |||| ||||||||||||||||||    
T  35884275 tggttaaaaattatagagaaaataaaaagaagaacacatttaatgcaatttgcatttaatttta 35884212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 35942005 - 35941842
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| ||| || |||  |||||  ||||| ||||||||| | || ||| || ||||||||| | ||||||||| || |||||||||    
T  35942005 tcacacttattaagaaaactaacacttaattatttgaggtataattttttgtgctctccttgaaataagttttatggaaagatgtaataataattttcat 35941906  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||  ||    ||||||| ||||| ||| | |||  |||||||||| |||||| |||||||||||    
T  35941905 tgattaaaaattatggagaaaataaaaaagagaacaaattgaatgcaatttgtatttaatttta 35941842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 43656033 - 43656196
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| ||| || ||   |||||  ||||| ||||||||||| || ||| || |||||| || | |||||||||||| |||||||||    
T  43656033 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgaaataagtttcatggaaagatgtaaaaataattttcat 43656132  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| ||    ||||| | ||||| |||   |||  |||||||||| ||||||||||||||||||    
T  43656133 tggttaaaaattatgaagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 43656196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 314 - 352
Target Start/End: Complemental strand, 11241077 - 11241039
Alignment:
Q  314 aaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  11241077 aaaattgaatgtaatttacatttaattttatgagaataa 11241039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 276
Target Start/End: Original strand, 46803670 - 46803760
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 276  Q
    ||||||||||||  ||||||||  | |||| |  ||||||||||||||| || ||| || |||||| |||| |||||||||||||||||||    
T  46803670 ttattaagaaaaccaaaacatagtagtttgcaacatagttttttgtgttatccttgcaataagtttcatagaaagatgtaaaaacaatttt 46803760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 302
Target Start/End: Original strand, 51338938 - 51339012
Alignment:
Q  228 ttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaat 302  Q
    ||||||| |||||| || |||||| |||| ||||||||||| ||||||||||||| |||| ||||| || |||||    
T  51338938 ttgtgttgtctttgaaataagtttcatagaaagatgtaaaatcaattttcattggttattagttatagagaaaat 51339012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 302
Target Start/End: Original strand, 51840536 - 51840610
Alignment:
Q  228 ttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaat 302  Q
    ||||||| ||||||||| |||||| |||| ||||| ||||| ||||||||||||| |||| ||||| || |||||    
T  51840536 ttgtgttatctttggaataagtttcatagaaagatataaaatcaattttcattggttattagttatagagaaaat 51840610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 4672843 - 4672798
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||| ||| |||||||||||||||||||||||||| |||||||    
T  4672843 gataaaaatttatcttttttgcttatattttgggacaaagaaaatg 4672798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 6785400 - 6785355
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||||    
T  6785400 gataaaagtttatcttttttgcttatattttgtgacaaagaaaatg 6785355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 342
Target Start/End: Original strand, 39151242 - 39151315
Alignment:
Q  269 acaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    |||||||||||||| |||| ||||| || ||||||||||| | || |||||||||| | ||| |||||||||||    
T  39151242 acaattttcattggttattagttattgataaaatgaaagataaagcaaattgaatgcactttacatttaatttt 39151315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 26907087 - 26907248
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| ||| || |||  |||||  ||||| ||||||||||| || |||||| |||||| || | |||||||||||| ||  ||| |    
T  26907087 tcacacttattaagaaaactaatacttaatgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataa--ttcgt 26907184  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| ||    ||||||| ||||| |||   |||  |||||||||| ||||||||||||||||||    
T  26907185 tggttaaaaattatggagaaaataaaaaggagaataaattgaatgcaatttgcatttaatttta 26907248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 29488707 - 29488663
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||| ||||||||||||||||||||| ||||| |||||||    
T  29488707 ataaaagttggtcttttttgcttatattttgagacaaagaaaatg 29488663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 43359740 - 43359696
Alignment:
Q  298 aaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    ||||||||||| |||| |||||||||||| |||||||||||||||    
T  43359740 aaaatgaaagagagagcaaattgaatgtactttgcatttaatttt 43359696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 40935609 - 40935772
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    |||||||||||||||||| ||| || ||   |||||  ||||  ||||||||||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  40935609 tcacatttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 40935708  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| ||    ||||||| ||||| |||   |||  ||||| |||| || |||||||||||||||    
T  40935709 tggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaatttta 40935772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 417
Target Start/End: Complemental strand, 46542923 - 46542880
Alignment:
Q  375 aaaagtttgtctttttt-gcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||||||| |||||||||||||||||| |||||||    
T  46542923 aaaagtttgtctttttttgcttatattttgggacaaagaaaatg 46542880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 417
Target Start/End: Original strand, 298884 - 298929
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||| ||||||||||||||||| |||||| ||||| |||||||    
T  298884 gataaaactttgtcttttttgcttacattttgagacaaagaaaatg 298929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 1820359 - 1820314
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||||||||||||| |||||||||| ||| || |||||||    
T  1820359 gataaaagtttgtcttttttacttatattttaggataaagaaaatg 1820314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 7397670 - 7397625
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||| | |||||||||||||| |||||||||| |||||||    
T  7397670 gataaaagttaggcttttttgcttataatttgggacaaagaaaatg 7397625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 33369497 - 33369452
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||| |||||||||||||||||||| | |||||| |||||||    
T  33369497 gataaaagcttgtcttttttgcttatattctaggacaaagaaaatg 33369452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 47026438 - 47026393
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||||||||||||| |||||||||| | |||| |||||||    
T  47026438 gataaaagtttgtcttttttacttatattttagaacaaagaaaatg 47026393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 408
Target Start/End: Original strand, 3875240 - 3875276
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggaca 408  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  3875240 gataaaaatttgtcttttttgcttatattatgggaca 3875276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 409
Target Start/End: Complemental strand, 9128002 - 9127966
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  9128002 ataaaagttggtcttttttgcttatattttgagacaa 9127966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 416
Target Start/End: Complemental strand, 11240989 - 11240945
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaat 416  Q
    ||||||||| |||| |||||||||||||| |||||||| ||||||    
T  11240989 gataaaagtgtgtcctttttgcttatattctgggacaaagaaaat 11240945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 26907290 - 26907334
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||| ||||||||| ||||||||||| ||||| |||||||    
T  26907290 ataaaagttggtcttttttacttatattttgagacaaagaaaatg 26907334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 409
Target Start/End: Original strand, 28916716 - 28916752
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  28916716 ataaaagtttgtcttttttacttatattttgagacaa 28916752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #112
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 409
Target Start/End: Complemental strand, 35189159 - 35189123
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  35189159 ataaaagttggtcttttttgcttatattttgagacaa 35189123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #113
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 38942642 - 38942686
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||  |||||||||||||||||||| ||||| |||||||    
T  38942642 ataaaagttgatcttttttgcttatattttgagacaaagaaaatg 38942686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #114
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 409
Target Start/End: Original strand, 39026447 - 39026483
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  39026447 ataaaagttggtcttttttgcttatattttgagacaa 39026483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #115
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 40935814 - 40935858
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||  |||||||||||||||||||| ||||| |||||||    
T  40935814 ataaaagttgatcttttttgcttatattttgagacaaagaaaatg 40935858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #116
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 40960675 - 40960719
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||  |||||||||||||||||||| ||||| |||||||    
T  40960675 ataaaagttgatcttttttgcttatattttgagacaaagaaaatg 40960719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #117
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 343
Target Start/End: Original strand, 44056377 - 44056457
Alignment:
Q  263 gtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    |||||||||||| ||||||| || || ||||||| ||||| | |   ||||||||| ||||| || |||||||||||||||    
T  44056377 gtaaaaacaattctcattggttaatgattatggagaaaataagaaggagagaaaatggaatgcaaattgcatttaatttta 44056457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #118
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 409
Target Start/End: Complemental strand, 44875138 - 44875102
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  44875138 ataaaagttggtcttttttgcttatattttgagacaa 44875102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #119
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 409
Target Start/End: Complemental strand, 46949280 - 46949244
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  46949280 ataaaagttggtcttttttgcttatattttgagacaa 46949244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #120
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 49924378 - 49924334
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||  |||||||||||||||||||| ||||| |||||||    
T  49924378 ataaaagttgatcttttttgcttatattttgagacaaagaaaatg 49924334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 178; Significance: 8e-96; HSPs: 73)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 178 - 419
Target Start/End: Original strand, 6110189 - 6110433
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  6110189 aatcacacttattaagaaaactaaaacataagaatttggagtatagctttttgtgttttcttcggaaaaagttttataggaagatgtaaaaacaattttc 6110288  T
Q  278 attggctattggttatggaaaaaatgaa--agaaagagaaaattgaatgtaatttgcatttaattttatgagaat-aacnnnnnnnntcttggaaaagat 374  Q
    ||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||| |||        |||||||||||||    
T  6110289 attggctattggttatggaaaaaatgaaagagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcttggaaaagat 6110388  T
Q  375 aaaagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  6110389 aaaagtttgtcttttttgcttatattttgggacaaagaaaatgtg 6110433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 186 - 419
Target Start/End: Original strand, 28599146 - 28599381
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  28599146 ttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagatttataggaagatgtaaaaataattttcattggcta 28599245  T
Q  286 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa--cnnnnnnnntcttggaaaagataaaagtttg 383  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||           ||||||||||||||||||||||    
T  28599246 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatatgcatttaattttatgagaataaacaaaaaaaaatcttggaaaagataaaagtttg 28599345  T
Q  384 tcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    ||||||||| |||||||||||||||| |||||||||    
T  28599346 tcttttttgattatattttgggacaaagaaaatgtg 28599381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 178 - 419
Target Start/End: Complemental strand, 35517293 - 35517050
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||    
T  35517293 aatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatagtgagatgtaaaaataattttc 35517194  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac--nnnnnnnntcttggaaaagata 375  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||| ||||||||    
T  35517193 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaaatcttgaaaaagata 35517094  T
Q  376 aaagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    ||||||||||||||||||||||||||||| || | |||||||||    
T  35517093 aaagtttgtcttttttgcttatattttggtacgaagaaaatgtg 35517050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 178 - 416
Target Start/End: Complemental strand, 45085427 - 45085188
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  45085427 aatcacacttattaagaaaattaaaacataagaatttggagtatagttttttgtattttctttgaaaaaagttttataggaagatgtaaaaacaattttc 45085328  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaat-aacnnnnnnnntcttggaaaagataa 376  Q
    ||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||        |||| ||||||||||    
T  45085327 attagccattggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcttagaaaagataa 45085228  T
Q  377 aagtttgtcttttttgcttatattttgggacaacgaaaat 416  Q
    |||||| |||||||||||||||||||||||||| ||||||    
T  45085227 aagtttatcttttttgcttatattttgggacaaagaaaat 45085188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 178 - 419
Target Start/End: Complemental strand, 41528427 - 41528184
Alignment:
Q  178 aatcacatttattaagaaaattaaaa-cataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 276  Q
    ||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||    ||||||||||||||||||||||||||||    
T  41528427 aatcacacttattaagaaaattaaaaacataagaatttgaagtatagttttttgtgttttctttgaaattttttttataggaagatgtaaaaacaatttt 41528328  T
Q  277 cattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaat-aacnnnnnnnntcttggaaaagata 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||        ||||| ||||||||    
T  41528327 cattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcttgaaaaagata 41528228  T
Q  376 aaagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    ||||||||||||||||||||||||||||||||||  ||||||||    
T  41528227 aaagtttgtcttttttgcttatattttgggacaaacaaaatgtg 41528184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 178 - 419
Target Start/End: Complemental strand, 3201496 - 3201263
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3201496 aatcacacttattaagaaaactaaaacataagaatttaaagtatagttttttgtgttttctttggaaaaagttttatagaaagatgtaaaaacaattttc 3201397  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataacnnnnnnnntcttggaaaagataaa 377  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||               |||||||||     
T  3201396 attggctattggttatggaaaaaatgaaagaaagataaaattgaatgtaatttgcatttaattttatgagaataaacaaaaa--------aaaagataat 3201305  T
Q  378 agtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    ||||||||||||||||||||||||||||| || |||||||||    
T  3201304 agtttgtcttttttgcttatattttgggataaagaaaatgtg 3201263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 19264270 - 19264095
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19264270 aatcacacttattaagaaaactaaaacataagaatttagagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 19264171  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaa-tttgcatttaattttatgagaataa 352  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  19264170 attggctattggttatggaaaaaattaaagagagagaaaattgaatgtaattttgcatttaattttatgagaataa 19264095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 45660538 - 45660361
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaat---ttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatt 274  Q
    |||||||||||||||||||| ||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  45660538 aatcacatttattaagaaaactaaaacataagaataatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatt 45660439  T
Q  275 ttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||||||||||||||||| ||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||    
T  45660438 ttcattggctattggttatggagaaaatgaaagagagataaaattaaatgtaatttgcatttaattttatgagaataa 45660361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 11617194 - 11617020
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||    
T  11617194 aatcacacttattaagaaaattaaaacataagaatttggagtatagtttttggtattttctttgaaaaaagttttataggaagatgtaaaaacaattttc 11617095  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||||||||||| | |||||| ||||| ||||||||||||||| ||||||||||| ||||||||| |||||    
T  11617094 attggctattggttatagtaaaaataaaagagagagaaaattgaatgaaatttgcattttattttatgaaaataa 11617020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 181 - 352
Target Start/End: Original strand, 33198624 - 33198795
Alignment:
Q  181 cacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 280  Q
    |||| |||||||||||| ||||| ||||||||||||| | ||||||||||||||||||||  || ||||||||||||||||||||||||||||||| |||    
T  33198624 cacacttattaagaaaactaaaatataagaatttggactctagttttttgtgttttctttaaaagaagttttataggaagatgtaaaaacaattttgatt 33198723  T
Q  281 ggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    || ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  33198724 ggttattggttatggagaaaatgaaagagagagaaaattgaatgtaatttgcatttaattctatgagaataa 33198795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 6765923 - 6766098
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||||||||||||||||||||| |||||| ||||||||||||| ||||||| |||||| || ||||||||||||||||||||||||||||     
T  6765923 aatcacacttattaagaaaattaaaacataaaaatttgaagtatagttttttatgttttcattggaataaattttataggaagatgtaaaaacaattttt 6766022  T
Q  278 attggctattggttatgg-aaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||| ||||||||||||| |||||||| |||| ||||||||||||||||||||| |||||||||| ||||||||||    
T  6766023 attgactattggttatggaaaaaaatggaagagagagaaaattgaatgtaatttacatttaatttaatgagaataa 6766098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 177 - 352
Target Start/End: Complemental strand, 12938413 - 12938238
Alignment:
Q  177 taatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 276  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||  |||||||||||||||    
T  12938413 taatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgctttctttgaaataagttttataggaaagtgtaaaaacaatttt 12938314  T
Q  277 cattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||||||| ||||||| ||||| ||||| ||| |||  ||||||||||||||||||||||| ||||||||||    
T  12938313 cattggctattgattatggagaaaataaaagagagataaatatgaatgtaatttgcatttaatttcatgagaataa 12938238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 28858482 - 28858305
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagta---tagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatt 274  Q
    |||||||  ||||||||||| ||||||||||||||||  | ||   ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||    
T  28858482 aatcacacatattaagaaaactaaaacataagaatttaaaatatagtagttttttgtgttttctttgaaaaaagttttatagaaagatgtaaaaataatt 28858383  T
Q  275 ttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  28858382 ttcattggctattggttattgtaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataa 28858305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 25572215 - 25572042
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||| |||||||||||| || ||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||    
T  25572215 aatcacacttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattttc 25572116  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||| ||||||||||||| |||||| |||| |||||||||| ||||||||||||||||||||| ||||||||||    
T  25572115 attggatattggttatgga-aaaatggaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataa 25572042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 29524031 - 29524205
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||| ||||| |||| |||||||||||| || ||| ||||||||||||||||||||| |||||| || ||||||||||||||||||||||    
T  29524031 aatcacacttattatgaaaactaaagcataagaatttgtagcataattttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattttc 29524130  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||| |||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||| ||||||||||    
T  29524131 attggcaattggttatggaaaaaataaaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataa 29524205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 24204519 - 24204693
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    |||||||||||| ||||||| |||||| ||||||||||||||||| ||| ||||||||||||||||| |||||||||||||| |||||||| ||||||||    
T  24204519 aatcacatttatcaagaaaactaaaacctaagaatttggagtataatttattgtgttttctttggaataagttttataggaatatgtaaaatcaattttc 24204618  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||||| | |||||| |||| |||||||||||||| |||||| |||||||| | ||||||||||    
T  24204619 attggctattggttatgaagaaaatggaagagagagaaaattgaatataatttacatttaatatcatgagaataa 24204693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 9864708 - 9864881
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagtttt-ttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 276  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| || |||||| ||||||||||||||    
T  9864708 aatcacacttattaagaaaactaaaacataagaatttggagtatagtttttttgtgttttctttggaataagtttcatgggaagaggtaaaaacaatttt 9864807  T
Q  277 cattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||| |||| ||||||| |||||| |||  ||| |||||||||||||||||||||||||||| ||||||||||    
T  9864808 cattggcaattgattatggagaaaatggaag--agataaaattgaatgtaatttgcatttaatttcatgagaataa 9864881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 186 - 349
Target Start/End: Complemental strand, 8701764 - 8701601
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    |||||||||||| |||||||||| |||||| || |||||||||| |||||||||||||| |||||| || ||||||||||||||||||||||||||||||    
T  8701764 ttattaagaaaactaaaacataaaaatttgtagcatagttttttatgttttctttggaataagtttcatgggaagatgtaaaaacaattttcattggcta 8701665  T
Q  286 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaa 349  Q
    |||||||||||||||||| |||| |||||||||| |||| |||||| ||||||||| |||||||    
T  8701664 ttggttatggaaaaaatggaagagagagaaaattaaatgaaatttgtatttaatttcatgagaa 8701601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 206 - 352
Target Start/End: Complemental strand, 14874105 - 14873958
Alignment:
Q  206 taagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaa 305  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  14874105 taagagtttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaataattttcattggctattggttatggagaaaatgaa 14874006  T
Q  306 agaaagagaaaattgaatgtaatttgca-tttaattttatgagaataa 352  Q
    ||| ||| |||||| ||||||||||||| ||||||| |||||||||||    
T  14874005 agagagataaaattaaatgtaatttgcattttaattatatgagaataa 14873958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 7645217 - 7645394
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||||||||||||||||| | |||||||||||| || ||| || ||| || |||| |||||||||||||||||    
T  7645217 aatcacacttattaagaaaactaaaacataagaatttggagtataatattttgtgttttccttagaataaatttcatgggaacatgtaaaaacaattttc 7645316  T
Q  278 attggctattggttatggaaaaaatg---aaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||  ||||||| ||||||   ||  | |||||||||||||||||||||||||||||||| ||||||||||    
T  7645317 attggctattaattatggagaaaatggttaattatagagaaaattgaatgtaatttgcatttaatttcatgagaataa 7645394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 186 - 352
Target Start/End: Complemental strand, 5963362 - 5963197
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    |||||||||||| ||||| |||||||||| |||| || ||||||||||||||||| ||| ||||||||| ||| |||||||||| |||||| ||||||||    
T  5963362 ttattaagaaaactaaaatataagaatttagagtctaattttttgtgttttctttagaataagttttatggga-gatgtaaaaataatttttattggcta 5963264  T
Q  286 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||| | |||||| |||| |||||||||||||||||||||||||||||| | || |||||||    
T  5963263 ttggttatgaagaaaatggaagagagagaaaattgaatgtaatttgcatttaatgtcataagaataa 5963197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 226 - 352
Target Start/End: Original strand, 40584436 - 40584562
Alignment:
Q  226 ttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgt 325  Q
    ||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||| | |||||||||| |||||||||||| ||||||||||||||||    
T  40584436 ttttgtgttttctttagaataagttttatgggaagatgtaaaaacaattttcattggttgttggttatgggaaaaatgaaagagagagaaaattgaatgt 40584535  T
Q  326 aatttgcatttaattttatgagaataa 352  Q
    |||||||||||||||| |||| |||||    
T  40584536 aatttgcatttaatttcatgaaaataa 40584562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 180 - 348
Target Start/End: Complemental strand, 35023066 - 35022897
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||  |||||| |||||||||||||||||||||||||||    
T  35023066 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgtttt-tttggagtaagtttcataggaagatgtaaaaacaattttcat 35022968  T
Q  280 tggc--tattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgaga 348  Q
    | ||  ||||| ||| ||| ||||||  ||| ||||||||||||||  |||||||||||||||| ||||||    
T  35022967 ttgctatattgtttaaggagaaaatggtagagagagaaaattgaatacaatttgcatttaatttaatgaga 35022897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 182 - 352
Target Start/End: Original strand, 30830590 - 30830760
Alignment:
Q  182 acatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattg 281  Q
    |||||||||||||||||||||||||||||| |||||||||   |||||||||||| |||| || |||||| ||  |||||| |||||| || ||||||||    
T  30830590 acatttattaagaaaattaaaacataagaaattggagtatgtctttttgtgttttttttgaaataagtttcatgagaagatttaaaaaaaaatttcattg 30830689  T
Q  282 gctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    | ||||| |||| || ||||||||| | ||||||||||| |||||||||||||||||||| ||||||||||    
T  30830690 gttattgattattgagaaaatgaaaaagagagaaaattgtatgtaatttgcatttaatttcatgagaataa 30830760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 186 - 352
Target Start/End: Complemental strand, 33677645 - 33677479
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    |||||| ||||| |||||||||| |||||| || |||||||||| |||||| |||  |  |||||||||||||||||||||||||||||||||||| |||    
T  33677645 ttattacgaaaactaaaacataaaaatttgaagaatagttttttatgttttttttttactaagttttataggaagatgtaaaaacaattttcattgacta 33677546  T
Q  286 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||| |||||  |||| | |||||||||||||| ||| ||||||||||| ||||||||||    
T  33677545 ttggttatggagaaaattgaagagaaagaaaattgaatgttattagcatttaatttcatgagaataa 33677479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 178 - 327
Target Start/End: Original strand, 35115793 - 35115943
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaa-aagttttataggaagatgtaaaaacaatttt 276  Q
    ||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||| |||   || ||||||||||| |||||||||||||||||||    
T  35115793 aatcacacttattaagagaactaaaacataagaatttggagtatagttttttgtgtttttttttttaataagttttatagaaagatgtaaaaacaatttt 35115892  T
Q  277 cattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaa 327  Q
    |||| | ||||||||||||| |||||| |||| || |||||||||||||||    
T  35115893 catttgttattggttatggagaaaatggaagagagtgaaaattgaatgtaa 35115943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 44455159 - 44454987
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||| |||||||||||||| ||||| ||| |||||||||||||||||||||||||||| ||| ||| |||||| || |||| | ||||||| ||  |||    
T  44455159 aatcatatttattaagaaaactaaaatatatgaatttggagtatagttttttgtgttttattttgaataagtttcatgggaaaacgtaaaaaaaa--ttc 44455062  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||| |||| || |||||| |||| ||  |||||||||||||||||||||||||||| ||||||||||    
T  44455061 attggctattgattatagagaaaatggaagagaggaaaaattgaatgtaatttgcatttaatttcatgagaataa 44454987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 178 - 324
Target Start/End: Original strand, 40808710 - 40808853
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||| |||||||||||| || ||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||    
T  40808710 aatcacacttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagtttcat-ggaagatgtaaaaacaattttc 40808808  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatg 324  Q
    ||| || |||||||| ||||||||| ||||  |||||||||| ||||    
T  40808809 attagcaattggttagggaaaaaataaaag--agagaaaattaaatg 40808853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 178 - 342
Target Start/End: Complemental strand, 26998487 - 26998323
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    |||||||||||||||||||| ||||||||   | |||| |  ||||||||||||||| |||||  || ||||||||||||||||||||||||||||||||    
T  26998487 aatcacatttattaagaaaactaaaacatggtagtttgtaagatagttttttgtgttatctttaaaataagttttataggaagatgtaaaaacaattttc 26998388  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    |||||   ||| |||| || ||||||||| | |||| |||||||||| | |||||||||||||||    
T  26998387 attggtagttgattatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttt 26998323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 178 - 281
Target Start/End: Complemental strand, 43415571 - 43415468
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||| |||||||| ||||| ||||||||||| |||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  43415571 aatcacacttactaagaaaactaaaatataagaatttgaagtataattttttgtgttttctttaaaaaaagttttataggaagatgtaaaaacaattttc 43415472  T
Q  278 attg 281  Q
    ||||    
T  43415471 attg 43415468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 180 - 342
Target Start/End: Complemental strand, 32010270 - 32010108
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| ||| |||||  | |||| | |||||||||||||||| |||||| || |||||||||||||||||||||||| |||||||||    
T  32010270 tcacacttattaagaaaactaatacatagtagtttgtaatatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaataattttcat 32010171  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    |||   ||| |||| || ||||||||| | |||| ||||| |||| | |||||||||||||||    
T  32010170 tggtagttgattatagagaaaatgaaaaagagagcaaattaaatgcactttgcatttaatttt 32010108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 181 - 350
Target Start/End: Complemental strand, 4707585 - 4707419
Alignment:
Q  181 cacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 280  Q
    ||||||||||||||| | |||||||| |   |||||||||||||||||||||||||| || ||| |||||| |  ||||||||| |||||||||||||||    
T  4707585 cacatttattaagaacactaaaacatga---tttggagtatagttttttgtgttttccttagaataagtttaacgggaagatgttaaaacaattttcatt 4707489  T
Q  281 ggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaat 350  Q
    || ||||  | || ||||||| || || | ||| | |||||||| ||||| |||||||||||| ||||||    
T  4707488 ggttattcatcatagaaaaaaggagaggaggagcacattgaatgcaatttacatttaattttacgagaat 4707419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 220 - 342
Target Start/End: Complemental strand, 32273799 - 32273677
Alignment:
Q  220 atagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaatt 319  Q
    ||||||||||||||| |||||| || ||||||||||||||||| |||||||||||||||||||   ||| |||| || ||||||||| | |||| |||||    
T  32273799 atagttttttgtgttatctttgaaataagttttataggaagatataaaaacaattttcattggtagttgattatagagaaaatgaaaaagagagcaaatt 32273700  T
Q  320 gaatgtaatttgcatttaatttt 342  Q
    ||||| | ||| |||||||||||    
T  32273699 gaatgcactttacatttaatttt 32273677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 243 - 352
Target Start/End: Original strand, 30421237 - 30421346
Alignment:
Q  243 aaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    ||||||||||||| |||||||||||||||||||| || |  ||||  || |  |||||||||||||||||||||||| |||||||||| |||||||||||    
T  30421237 aaaaagttttataagaagatgtaaaaacaatttttatcgattattaatttttaaaaaaatgaaagaaagagaaaattaaatgtaatttacatttaatttt 30421336  T
Q  343 atgagaataa 352  Q
    || |||||||    
T  30421337 ataagaataa 30421346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 186 - 342
Target Start/End: Complemental strand, 38071157 - 38071002
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    |||||||||||| ||||||||   | |||| |  ||||||||||||||| |||||| || |||||||| ||||||||||||||||||||||||||||       
T  38071157 ttattaagaaaactaaaacatggtagtttgtaacatagttttttgtgttatctttgaaataagttttacaggaagatgtaaaaacaattttcattggtag 38071058  T
Q  286 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    ||| |||| || ||||||||| | |||| |||||||||| | ||| |||||||||||    
T  38071057 ttgattatagagaaaatgaaa-atagagcaaattgaatgcactttacatttaatttt 38071002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 220 - 335
Target Start/End: Complemental strand, 9709641 - 9709526
Alignment:
Q  220 atagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaatt 319  Q
    ||||||| ||||||| || ||| || ||||||||||||||||||| ||||||||||||||| | ||||| |||| || ||||||||||| |||  |||||    
T  9709641 atagtttcttgtgttatccttgaaacaagttttataggaagatgtgaaaacaattttcatttgttattgattattgagaaaatgaaagagagaacaaatt 9709542  T
Q  320 gaatgtaatttgcatt 335  Q
    ||||| ||||||||||    
T  9709541 gaatgcaatttgcatt 9709526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 177 - 342
Target Start/End: Original strand, 4891627 - 4891793
Alignment:
Q  177 taatcacatttattaagaaaattaaaacataagaatttggagtatagtttt-ttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattt 275  Q
    ||||||||||||||||||||| ||||| |||  | |||| |  |||||||| ||||||| |||||| || ||||||||||||||||||||||||||||||    
T  4891627 taatcacatttattaagaaaactaaaatatagtagtttgtaacatagtttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattt 4891726  T
Q  276 tcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    | |||||   ||| ||||  | ||||||||| | |||| | |||||||| | ||| |||||||||||    
T  4891727 ttattggtagttgattataaagaaaatgaaaaagagagcagattgaatgcactttacatttaatttt 4891793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 266 - 352
Target Start/End: Original strand, 39696877 - 39696963
Alignment:
Q  266 aaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||| ||||||| | || || |||||| ||||||||||||||| |||||||||||||||||||||  |||||||||    
T  39696877 aaaacaattttcattagctattgatcatagagaaaatggaagaaagagaaaattaaatgtaatttgcatttaatttcgtgagaataa 39696963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 273 - 323
Target Start/End: Original strand, 5280592 - 5280642
Alignment:
Q  273 ttttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaat 323  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5280592 ttttcattggctattggttatggaaaaaatgaaagagagagaaaattgaat 5280642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 220 - 342
Target Start/End: Complemental strand, 20380251 - 20380129
Alignment:
Q  220 atagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaatt 319  Q
    ||||||||||||||| |||||| || |||||||||||||| ||||||||| ||  ||||||||   ||| |||| || |||||||||   |||| |||||    
T  20380251 atagttttttgtgttatctttgaaataagttttataggaaaatgtaaaaaaaaaattcattggtagttgattatagagaaaatgaaaacgagagcaaatt 20380152  T
Q  320 gaatgtaatttgcatttaatttt 342  Q
    ||||| | |||||||||||||||    
T  20380151 gaatgcactttgcatttaatttt 20380129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 246 - 342
Target Start/End: Original strand, 8032726 - 8032823
Alignment:
Q  246 aagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaa-gaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    ||||||||||||||||||||||||||||||| ||||| |  | ||||| || ||||||||| || |||| |||||||||| | |||||||||||||||    
T  8032726 aagttttataggaagatgtaaaaacaatttttattggttgctagttattgagaaaatgaaaggagagagcaaattgaatgcattttgcatttaatttt 8032823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 18833902 - 18834065
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||  ||||| ||   ||||||  ||||| ||||||||||| |  |||||| |||||| || | ||||||||||||||||| ||||    
T  18833902 tcacacttattaagaaagctaaaatattgtaatttgaggtataattttttgtgttattcttggaataagtttcatggaaagatgtaaaaacaattatcat 18834001  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| || |  ||||||| ||||| |||   |||  |||||||||| ||||||||||||||||||    
T  18834002 tggttaattattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 18834065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 370 - 417
Target Start/End: Complemental strand, 19264045 - 19263998
Alignment:
Q  370 aagataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  19264045 aagataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 19263998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 178 - 302
Target Start/End: Complemental strand, 32428144 - 32428019
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtg-ttttctttggaaaaagttttataggaagatgtaaaaacaatttt 276  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||||||  || ||| |||| |||  || |||||| || | || ||||||||| ||||||    
T  32428144 aatcatatttattaaaaaaactaaaacataagaatttggagtatagtccttggtgtttttttttataataagtttcatggaaacatgtaaaaataatttt 32428045  T
Q  277 cattggctattggttatggaaaaaat 302  Q
    ||||| |||||| ||| ||| |||||    
T  32428044 cattgactattgattacggagaaaat 32428019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 220 - 342
Target Start/End: Original strand, 11030962 - 11031077
Alignment:
Q  220 atagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaatt 319  Q
    ||||||| |||| || |||||  || ||||||||||| ||||| |||||||||||||       |||||||||| || ||||||||||| |||| |||||    
T  11030962 atagtttcttgtcttatctttaaaataagttttatagaaagatataaaaacaatttt-------tattggttattgagaaaatgaaagagagagcaaatt 11031054  T
Q  320 gaatgtaatttgcatttaatttt 342  Q
    ||||| | |||||||||||||||    
T  11031055 gaatgcactttgcatttaatttt 11031077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 271
Target Start/End: Original strand, 11825349 - 11825438
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaaca 271  Q
    ||||||| |||||||||||| |||||||||||||||| || ||||     ||||||||||||||||| |||||| || | ||||||||||||||    
T  11825349 aatcacacttattaagaaaactaaaacataagaattttgaatata----attgtgttttctttggaataagtttcatggaaagatgtaaaaaca 11825438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 792348 - 792511
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| ||| || ||   |||||  ||||| ||||||||||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  792348 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 792447  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| ||    ||||||| ||||| |||   |||  |||||||||| ||||||||||||||||||    
T  792448 tggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 792511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 5280536 - 5280595
Alignment:
Q  194 aaaattaaaacataagaatttggagtatag-ttttttgtgttttctttggaaaaagtttt 252  Q
    |||| ||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||    
T  5280536 aaaactaaaacataagaatttggactatagtttttttgtgttttcttgggaaaaagtttt 5280595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 343
Target Start/End: Complemental strand, 9294816 - 9294656
Alignment:
Q  183 catttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 282  Q
    ||||||||||||||| ||||| |||  | |||| |||||| |||||||| ||||  ||| || |||||| || | || |||||||||||||| | |||||    
T  9294816 catttattaagaaaactaaaagatagtagtttgaagtataattttttgtatttttcttgaaataagtttcatggaaaaatgtaaaaacaattcttattgg 9294717  T
Q  283 ctattggttatggaaaaaat-gaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
     || || ||||||| | ||| || || ||||  |||||||||| ||||||||||||||||||    
T  9294716 ttaatgattatggagagaatagagag-aagaacaaattgaatgcaatttgcatttaatttta 9294656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 236 - 281
Target Start/End: Original strand, 16494974 - 16495019
Alignment:
Q  236 tctttggaaaaagttttataggaagatgtaaaaacaattttcattg 281  Q
    |||||| || ||||||||||||||||||||||||||||||||||||    
T  16494974 tctttgaaataagttttataggaagatgtaaaaacaattttcattg 16495019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 417
Target Start/End: Original strand, 33198851 - 33198896
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||    
T  33198851 gataaaattttgtcttttttgcttatattttgggacaaagaaaatg 33198896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 342
Target Start/End: Original strand, 33932915 - 33933073
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| |||||||||  | |||| |||||| |||||||| || |  |||||  ||||||||||| |||||||||| ||||||    |    
T  33932915 tcacacttattaagaaaactaaaacatagtattttgtagtataattttttgtattattcttggattaagttttatagaaagatgtaaacacaatt----t 33933010  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
     || |||| || || || |||||||||| ||||| ||| |||||| || || |||||||||||    
T  33933011 cggttattagtcatagagaaaatgaaagtaagagcaaaatgaatgcaacttacatttaatttt 33933073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 38070959 - 38070914
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||    
T  38070959 gataaaagtttgtcttttttgcttataatttgggacaaagaaaatg 38070914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 249 - 342
Target Start/End: Complemental strand, 44442230 - 44442137
Alignment:
Q  249 ttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    ||||||| |||||||||||||||||||||||||    ||| |||| || ||||||||| | | || |||||||||| | |||||||||||||||    
T  44442230 ttttatatgaagatgtaaaaacaattttcattgatagttgattatagagaaaatgaaaaagatagcaaattgaatgcactttgcatttaatttt 44442137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 45660306 - 45660261
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||    
T  45660306 gataaaagtttgttttttttgcttatattttgggacaaagaaaatg 45660261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 416
Target Start/End: Original strand, 5280697 - 5280741
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaat 416  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||    
T  5280697 gataaaaatttgtcttttttgcttatattttgggacaaagaaaat 5280741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 25571987 - 25571943
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||||| |||||||||||||||||||||||| |||||||    
T  25571987 ataaaagtttgttttttttgcttatattttgggacaaagaaaatg 25571943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 29524258 - 29524302
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||    
T  29524258 ataaaagtttgtcttttttacttatattttgggacaaagaaaatg 29524302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 14565365 - 14565528
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| ||| || ||   |||||  ||||| ||||||||||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  14565365 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 14565464  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| ||    ||||||| ||||| |||   |||  ||||| |||| ||||||||||||||||||    
T  14565465 tggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaatttgcatttaatttta 14565528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 21539921 - 21539758
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| ||| || ||   |||||  ||||| ||||||||||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  21539921 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 21539822  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| ||    ||||||| ||||| |||   |||  |||||||||| || |||||||||||||||    
T  21539821 tgggtaaaaattatggagaaaataaaaaggagaacaaattgaatgcaacttgcatttaatttta 21539758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 373 - 416
Target Start/End: Original strand, 40808930 - 40808973
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaat 416  Q
    |||||| |||||||||||||||||||||||||||||| ||||||    
T  40808930 ataaaaatttgtcttttttgcttatattttgggacaaagaaaat 40808973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 44804062 - 44803899
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||||||| || ||   |||||  ||||| ||||||||||| || |||||| |||||| || | |||||||||||| |||| ||||    
T  44804062 tcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttaatggaaagatgtaaaaataattctcat 44803963  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| ||    ||||||| ||||| ||    |||  |||||||||| |||||| |||||||||||    
T  44803962 tggttaaaaattatggagaaaataaataggagaacaaattgaatgcaatttgtatttaatttta 44803899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 419
Target Start/End: Original strand, 18834109 - 18834155
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    |||||||||  |||||||||||||||||||||||||| |||||||||    
T  18834109 ataaaagttgatcttttttgcttatattttgggacaaagaaaatgtg 18834155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 28858253 - 28858208
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||| ||||||||||||||||| |||||| |||||||    
T  28858253 gataaaagtttgtattttttgcttatattttaggacaaagaaaatg 28858208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 21539716 - 21539672
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||| ||||||||||||||||||||| ||||| |||||||    
T  21539716 ataaaagttggtcttttttgcttatattttgagacaaagaaaatg 21539672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 33635295 - 33635251
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||| ||||||||||||||||||||| ||||| |||||||    
T  33635295 ataaaagttggtcttttttgcttatattttgagacaaagaaaatg 33635251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 26998280 - 26998235
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||| |||||||||||||||| ||| |||||| |||||||    
T  26998280 gataaaagttggtcttttttgcttataatttaggacaaagaaaatg 26998235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 343
Target Start/End: Complemental strand, 28492686 - 28492521
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| ||| || |||  |||||   |||| ||||||||||| || |||||| |||||| || | || ||||||||| |||| ||    
T  28492686 aatcacacttattaagaaaactaacacttaatgatttgagatataattttttgtgttctccttggaataagtttcatggaaatatgtaaaaataattctc 28492587  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||||| ||    |||| || ||||| |||   |||  || ||||||| ||||||||||||||||||    
T  28492586 attggttaaaaattatagagaaaataaaaaggagaataagttgaatgcaatttgcatttaatttta 28492521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 409
Target Start/End: Original strand, 792553 - 792589
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  792553 ataaaagttggtcttttttgcttatattttgagacaa 792589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 409
Target Start/End: Original strand, 14565571 - 14565607
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  14565571 ataaaagttagtcttttttgcttatattttgagacaa 14565607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 18455008 - 18454964
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||| ||| ||||||||||||||||||| |||||| |||||||    
T  18455008 ataaaaatttatcttttttgcttatattttaggacaaagaaaatg 18454964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 409
Target Start/End: Original strand, 29514216 - 29514252
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  29514216 ataaaagttggtcttttttgcttatattttgagacaa 29514252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 38549840 - 38549884
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||  |||||||||||||||||||| ||||| |||||||    
T  38549840 ataaaagttgatcttttttgcttatattttgagacaaagaaaatg 38549884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 174; Significance: 2e-93; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 179 - 419
Target Start/End: Original strand, 565 - 806
Alignment:
Q  179 atcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttca 278  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  565 atcacacttattaagaaaactaaaacataagaatttggagtatagttttatgtgttttctttgaaaaaagttttatagggagatgtaaaaacaattttca 664  T
Q  279 ttggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac-nnnnnnnntcttggaaaagataaa 377  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||    
T  665 ttggctattggttatggaaaaaatgaaagaaagataaaattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaatcttggaaaagataaa 764  T
Q  378 agtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    ||||||| ||||||||||||||||||| |||| |||||||||    
T  765 agtttgtgttttttgcttatattttggtacaaagaaaatgtg 806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 173; Significance: 7e-93; HSPs: 120)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 178 - 417
Target Start/End: Original strand, 37042367 - 37042607
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  37042367 aatcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttcgttggaaaaagttttataggaagatgtaaaaacaattttc 37042466  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac-nnnnnnnntcttggaaaagataa 376  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||| |    
T  37042467 attggctattgattatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaatcttggaaaagatta 37042566  T
Q  377 aagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    || |||||||||||| ||||||||||||||||| |||||||    
T  37042567 aaatttgtcttttttccttatattttgggacaaagaaaatg 37042607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 186 - 419
Target Start/End: Original strand, 11054269 - 11054500
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaa-agttttataggaagatgtaaaaacaattttcattggct 284  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  11054269 ttattaagaaaactaaaatataagaatttggagtatagttttttgtgttttctttggaaaaaagttttataggaagatttaaaaacaattttcattggct 11054368  T
Q  285 attggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac-nnnnnnnntcttggaaaagataaaagtttg 383  Q
    ||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||    
T  11054369 attggttatggaaaaaat----gaaagagaaaattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaatcttggaaaagataaaagtttg 11054464  T
Q  384 tcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    |||||||||||||||||||||||||| |||||||||    
T  11054465 tcttttttgcttatattttgggacaaagaaaatgtg 11054500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 186 - 419
Target Start/End: Original strand, 23311551 - 23311785
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    |||||||||||| |||||||||| ||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23311551 ttattaagaaaactaaaacataaaaatttagagtatagttttgtgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggcta 23311650  T
Q  286 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac-nnnnnnnntcttggaaaagataaaagtttgt 384  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||         ||||| ||||||||||||||||     
T  23311651 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatatacatttaattttatgagaataacaaaaaaaaatcttgaaaaagataaaagtttga 23311750  T
Q  385 cttttttgcttatattttgggacaacgaaaatgtg 419  Q
    ||||||||||||||||||||||||| |||||||||    
T  23311751 cttttttgcttatattttgggacaaagaaaatgtg 23311785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 180 - 419
Target Start/End: Complemental strand, 36546714 - 36546474
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| |||||||||| ||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||    
T  36546714 tcacacttattaagaaaactaaaacataaaaatttagagtatagttttttgtattttctttggaaaaagtttcataggaagatgtaaaaccaattttcat 36546615  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaat-aacnnnnnnnntcttggaaaagataaaa 378  Q
    |||||||||||||| |||||||||||||| ||||| |||| |||||||||||||||||||||||||||||| |||        ||||| |||||| ||||    
T  36546614 tggctattggttatagaaaaaatgaaagagagagagaatttaatgtaatttgcatttaattttatgagaataaacaaaaagaatcttgaaaaagacaaaa 36546515  T
Q  379 gtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  36546514 gtttgtcttttttgcttatattttgggacaaagaaaatgtg 36546474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 180 - 419
Target Start/End: Original strand, 36561601 - 36561841
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| |||||||||| ||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||    
T  36561601 tcacacttattaagaaaactaaaacataaaaatttagagtatagttttttgtattttctttggaaaaagtttcataggaagatgtaaaaccaattttcat 36561700  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaat-aacnnnnnnnntcttggaaaagataaaa 378  Q
    |||||||||||||| |||||||||||||| ||||| |||| |||||||||||||||||||||||||||||| |||        ||||| |||||| ||||    
T  36561701 tggctattggttatagaaaaaatgaaagagagagagaatttaatgtaatttgcatttaattttatgagaataaacaaaaagaatcttgaaaaagacaaaa 36561800  T
Q  379 gtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  36561801 gtttgtcttttttgcttatattttgggacaaagaaaatgtg 36561841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 178 - 419
Target Start/End: Complemental strand, 30189745 - 30189501
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  30189745 aatcacacttattaaaaaaattaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttc 30189646  T
Q  278 attggctattggttatggaa-aaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataac--nnnnnnnntcttggaaaagat 374  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||| |||||||||          |||| ||||||||    
T  30189645 attggctattggttatggaaaaaaatgaaagaaagagaatattgaatgtaatttacatttaattttacgagaataacaaaaaaaaaatcttagaaaagat 30189546  T
Q  375 aaaagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    |||| ||| ||||||||  | |||||||||||||| |||||||||    
T  30189545 aaaaatttatcttttttattaatattttgggacaaagaaaatgtg 30189501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 14752158 - 14752332
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  14752158 aatcacacttatttagaaaactaaaacataagaatttggagtataattttttgtgttttctttggaaaaaaatttataggaagatgtaaaaacaattttc 14752257  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14752258 attgactattggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataa 14752332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 28875580 - 28875406
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    |||||||||||||||||||| |||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  28875580 aatcacatttattaagaaaactaaagcataagaatttggactatagttatttgtgttttctttggaaaaagttttataagaagatgtaaaaacaattttc 28875481  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  28875480 attggctattggttatggagaaaatgaaagaaaaagaaaattgaatgtaatttgtatttaattttatgagaataa 28875406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 178 - 416
Target Start/End: Complemental strand, 47864365 - 47864125
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  47864365 aatcacatttattaagaaaactaaaacatgagaatttggagtatagttttttgcattttctttgaaaaaagttttataggaagatgtaaaaacaattttc 47864266  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa--cnnnnnnnntcttggaaaagata 375  Q
    |||| |||||| ||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||           ||||| ||||||||    
T  47864265 attgactattgattatgaaaaaaatgaaagagagaaaaaattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaaatcttgaaaaagata 47864166  T
Q  376 aaagtttgtcttttttgcttatattttgggacaacgaaaat 416  Q
     |||||||||||||||  |||||||||||||||| ||||||    
T  47864165 gaagtttgtcttttttatttatattttgggacaaagaaaat 47864125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 50650987 - 50651161
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| ||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  50650987 aatcacacttattaagaaaactaaaacataagaatttgaaatatagttttttgtgttttctttgcaaaaagttttataggaagatgtaaaaacaattttc 50651086  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||| |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  50651087 attgactattggttatggagaaaataaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataa 50651161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 35963326 - 35963152
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||     
T  35963326 aatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttgtttggaaaaagttttataggaagatggaaaaacaattttt 35963227  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||| ||||||||||||| ||||||||||| |||||||||| |||| |||||||||||||||||||||||||||    
T  35963226 attggttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataa 35963152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 6075255 - 6075081
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| ||||  |||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||| |||||||||||||||    
T  6075255 aatcacacttattaagaaaactaaagtataagaatttggagtataattttttgtgttttctttggaaaaagtgttacaggaagaagtaaaaacaattttc 6075156  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6075155 attggccattggttatgcaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataa 6075081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 7866433 - 7866607
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||||||||| |||||||||||||| | ||||||||| ||||||||||||| |||||||||||||||||||||    
T  7866433 aatcacacttattaagaaaactaaaacataagaatttagagtatagttttttttattttctttgaaaaaagttttataagaagatgtaaaaacaattttc 7866532  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||| |||||||||||||||||||| ||||| | ||||||||||||||||||| |||||||||||||||||||||    
T  7866533 attgactattggttatggaaaaaataaaagagatagaaaattgaatgtaattttcatttaattttatgagaataa 7866607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 46711608 - 46711781
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||||||||||  ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||    
T  46711608 aatcacacttattaagaaaacgaaaacataagaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatattc 46711707  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||||||||||| |||||||||||||| ||||||| |||||||||||||| |||||||||||||| |||||    
T  46711708 attggctattggttat-gaaaaaatgaaagagagagaaatttgaatgtaatttgtatttaattttatgaaaataa 46711781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 178 - 348
Target Start/End: Original strand, 579095 - 579258
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| ||||||||||||||||||       |||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  579095 aatcacacttattaagaaaactaaaacataagaatttgg-------ttttttgtgttttctttgaaaaaagttttataggaagatataaaaacaattttc 579187  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgaga 348  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  579188 attggctattggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgaga 579258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 206 - 352
Target Start/End: Complemental strand, 6438229 - 6438083
Alignment:
Q  206 taagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaa 305  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6438229 taagaatttggagtatagttttttgtgttttctttgaaaaaagctttataggaagatgtaaaaacaattttcattggctattggttatggagaaaatgaa 6438130  T
Q  306 agaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||| ||| |||||| ||||||||||||||||||||||||||||||||    
T  6438129 agagagataaaattaaatgtaatttgcatttaattttatgagaataa 6438083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 54464846 - 54465019
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||  |||||  || |||||||||||||||||||||||||    
T  54464846 aatcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttaaaaaaaaatt-ataggaagatgtaaaaacaattttc 54464944  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
     |||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  54464945 gttggctattggttatggaaaaagtgaaagagagagaaaattgaatgtaatttgcgtttaattttatgagaataa 54465019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 186 - 352
Target Start/End: Complemental strand, 37075126 - 37074958
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    ||||||| |||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37075126 ttattaaaaaaactaaaacataagaatttgaagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaacacaattttcattggcta 37075027  T
Q  286 ttggttatggaaaaaatg--aaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||| |||||||||  |||||  || |||||||||||||||||||||||||||||||||||||||    
T  37075026 ttggttatagaaaaaatgaaaaagagcgataaaattgaatgtaatttgcatttaattttatgagaataa 37074958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 53270408 - 53270233
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||| ||||| |||||||    
T  53270408 aatcacactcattaagaaaattaaa-cataagaatttggagtatagttttttgtgttttctttgaaaaaagtttcatagaaagatgaaaaaataattttc 53270310  T
Q  278 attggctattggttatggaaaaaatgaaagaaag--agaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||| |||||||||||||||||||||||||| ||  |||||||||||||||||||| ||||||||||||||||||||    
T  53270309 attgcctattggttatggaaaaaatgaaagagagaaagaaaattgaatgtaatttgtatttaattttatgagaataa 53270233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 50730283 - 50730109
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagtttttt-gtgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 276  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||  |     
T  50730283 aatcacatttattaagaaaactaaaacataagaatttggagtatagtttttttgtgctttctttggaaaaagttttataggaagatgtaaaaaaaaaat- 50730185  T
Q  277 cattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||| |||||||||||||||||||| ||| | ||||||||||||||||||||| |||||||||||| ||||||||    
T  50730184 cattgactattggttatggaaaaaataaaaaagagagaaaattgaatgtaatttacatttaattttaagagaataa 50730109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 50782571 - 50782745
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagtttttt-gtgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 276  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||  |     
T  50782571 aatcacatttattaagaaaactaaaacataagaatttggagtatagtttttttgtgctttctttggaaaaagttttataggaagatgtaaaaaaaaaat- 50782669  T
Q  277 cattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||| |||||||||||||||||||| ||| | ||||||||||||||||||||| |||||||||||| ||||||||    
T  50782670 cattgactattggttatggaaaaaataaaaaagagagaaaattgaatgtaatttacatttaattttaagagaataa 50782745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 2927464 - 2927289
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagtttttt-gtgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 276  Q
    |||||||||||||||||||| ||||||||||||||||| || |||||||||| || |||||||||||| ||||||||| |||||||||||||| ||||||    
T  2927464 aatcacatttattaagaaaactaaaacataagaatttgtagcatagtttttttgtattttctttggaataagttttatgggaagatgtaaaaataatttt 2927365  T
Q  277 cattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||||||||||||| |||||||  |||| |||||||||| ||||||||||| ||||||||| ||||||||||    
T  2927364 cattggctattggttatgaaaaaaatagaagagagagaaaattaaatgtaatttgtatttaatttcatgagaataa 2927289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 178 - 419
Target Start/End: Original strand, 23910463 - 23910687
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  23910463 aatcacacttattaagaaaattaaaacataagaatttagagtatagctttttgtgttttctttgtaaaaagttttataggaagatgtaaaaataattttc 23910562  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaat-aacnnnnnnnntcttggaaaagataa 376  Q
    |||||||||||||||||                  |||||||||||||||||||||||||||| ||||||||| |||        ||||| |||||||||    
T  23910563 attggctattggttatg------------------gaaaattgaatgtaatttgcatttaattatatgagaataaacaaaaaaaatcttgaaaaagataa 23910644  T
Q  377 aagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    || ||||||||||||||||||||||||||||||  ||||||||    
T  23910645 aaatttgtcttttttgcttatattttgggacaaaaaaaatgtg 23910687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 26208188 - 26208014
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||| | ||||| |||||| || | ||||||||||||||||||||    
T  26208188 aatcacacttattaagaaaactaaaacataagaatttagagtatagttttttgtgttttgtctggaataagtttcatggtaagatgtaaaaacaattttc 26208089  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||  || |||| |||||| ||||||||||||||||||||||||| |||||| | |||||||||||||    
T  26208088 attggctatttattgtggagaaaatggaagaaagagaaaattgaatgtaattggcatttgaatttatgagaataa 26208014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 29235361 - 29235193
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||||||||| |||||||||||||||| |||||||| ||||| |||| ||||||||||||||||| |||||||    
T  29235361 aatcacacttattaagaaaactaaaacataagaatttagagtatagttttttgtattttctttagaaaacgtttaataggaagatgtaaaaataattttc 29235262  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||||||||||||||||||| |      |||||||||||||| |||||||||| |||| |||||    
T  29235261 attggctattggttatggaaaaaatgaaagaga------attgaatgtaatttacatttaatttaatgataataa 29235193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 8703279 - 8703109
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||||| |||| |||||||||||||||||||||||||||||| |||| || ||||||||||  |||||||||||||||||||||||||| |    
T  8703279 aatcacacttattaaaaaaactaaaacataagaatttggagtatagttttt-gtgtgtt-tttggaaaaaaatttataggaagatgtaaaaacaattt-c 8703183  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||| ||||||||||| ||||||| | |||||||| ||||||||||||||||||||||||||||||||    
T  8703182 attggctattgattatggaaaaa-tgaaagagaaagaaaatttaatgtaatttgcatttaattttatgagaataa 8703109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 9055166 - 9054996
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||||| |||| |||||||||||||||||||||||||||||| |||| || ||||||||||  |||||||||||||||||||||||||| |    
T  9055166 aatcacacttattaaaaaaactaaaacataagaatttggagtatagttttt-gtgtgtt-tttggaaaaaaatttataggaagatgtaaaaacaattt-c 9055070  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||| ||||||||||| ||||||| | |||||||| ||||||||||||||||||||||||||||||||    
T  9055069 attggctattgattatggaaaaa-tgaaagagaaagaaaatttaatgtaatttgcatttaattttatgagaataa 9054996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 181 - 352
Target Start/End: Complemental strand, 19464248 - 19464075
Alignment:
Q  181 cacatttattaagaaaattaaaacataagaatttggagtata--gttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttca 278  Q
    |||| ||||||| |||| ||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||    
T  19464248 cacacttattaacaaaactaaaacataagaatttggagtatatagttttttgtgttttctttgaaaaaagttttataggaagattgaaaaacaattttca 19464149  T
Q  279 ttggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||   |||||||||||| |||||||||||| ||| ||| ||||||||||||||||||| | |||||||||||||    
T  19464148 tttattattggttatgggaaaaatgaaagagagaaaaagttgaatgtaatttgcatttcagtttatgagaataa 19464075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 194 - 351
Target Start/End: Original strand, 20847235 - 20847391
Alignment:
Q  194 aaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttat 293  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||| ||||||||||||  ||||||||||||||||  |||| ||||    
T  20847235 aaaattaaaacataagaatttggagtataatttt-tgtgttttctttggaataagtttcataggaagatgtgcaaacaattttcattggtaattgattat 20847333  T
Q  294 ggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaata 351  Q
    ||| ||||||||||| ||  ||||||||||||||||||||||||||||||||||||||    
T  20847334 ggagaaaatgaaagagaggaaaaattgaatgtaatttgcatttaattttatgagaata 20847391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 41476285 - 41476453
Alignment:
Q  178 aatcacatttattaagaaaattaaaa-cataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 276  Q
    ||||||| |||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||    
T  41476285 aatcacacttattaagaaaactaaaaacataaaaatttggagtatagttttttgtgttttctttgaaaaaagttttatagaaagatgtaaaaataatttt 41476384  T
Q  277 cattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||       || ||||||||||||||  | |||||||||||| ||||||||||||||||||||||||||||    
T  41476385 cattggc-------tagggaaaaaatgaaagggaaagaaaattgaatctaatttgcatttaattttatgagaataa 41476453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 186 - 352
Target Start/End: Original strand, 32619787 - 32619954
Alignment:
Q  186 ttattaagaaaattaa-aacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggct 284  Q
    |||||||||||| ||  ||||| ||||||||||||||| | ||||||||||||||||||| | |||||||| ||||||||||||| ||||||||||||||    
T  32619787 ttattaagaaaactatgaacatgagaatttggagtataatattttgtgttttctttggaataggttttataagaagatgtaaaaataattttcattggct 32619886  T
Q  285 attggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||||||| ||| ||  | | ||||||||||||||||||||||||||||||||||| |||||||    
T  32619887 attggttatggagaaattgggatagagagaaaattgaatgtaatttgcatttaattttattagaataa 32619954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 186 - 352
Target Start/End: Original strand, 26724949 - 26725115
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    |||||||||||| ||||| ||||||||||| |||||| ||||||||||||||||||||| ||||||| |  |||||||||||||||||||||||||| ||    
T  26724949 ttattaagaaaactaaaatataagaatttgaagtataattttttgtgttttctttggaataagttttctgagaagatgtaaaaacaattttcattggtta 26725048  T
Q  286 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||| ||||||| |||||  |||| ||| |||| |||||||||||||||| |||||| ||||||||||    
T  26725049 ttgattatggagaaaatagaagagagataaaactgaatgtaatttgcatataatttcatgagaataa 26725115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 177 - 305
Target Start/End: Complemental strand, 31837094 - 31836966
Alignment:
Q  177 taatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 276  Q
    |||||||| |||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||    
T  31837094 taatcacacttattaagaaaactaaaacataagaagttggagtatagttttttgtattttctttggaaaaagttttataggaatatgcaaaaacaatttt 31836995  T
Q  277 cattggctattggttatggaaaaaatgaa 305  Q
    ||||| ||||||||| |||| ||||||||    
T  31836994 cattgactattggttgtggagaaaatgaa 31836966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 9264725 - 9264610
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| ||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  9264725 aatcacacttattaagaaaactaaaacatatgaattttgagtatagttttttgtgttttctttgaaaaaagttttatatgaagatgtaaaaacaattttc 9264626  T
Q  278 attggctattggttat 293  Q
    |||||||||| |||||    
T  9264625 attggctattcgttat 9264610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 47116023 - 47115849
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||||||||||| |||| |||||||||||||||| ||||||| ||||||||||||  ||| ||| || |||||| | ||||||||||| ||||||||    
T  47116023 aatcacatttattaaaaaaactaaaacataagaatttagagtataattttttgtgtttgttttagaataaattttatggaaagatgtaaaagcaattttc 47115924  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
     |||| ||||| ||||||| |||||| || |||||||||||| |||| |||||  ||||||||| ||||||||||    
T  47115923 tttggttattgattatggataaaatggaaaaaagagaaaattaaatgaaatttatatttaatttcatgagaataa 47115849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 246 - 347
Target Start/End: Original strand, 34722623 - 34722724
Alignment:
Q  246 aagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatg 345  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||   ||||||||||||||||||||| ||||||||||||||    
T  34722623 aagttttataagaagatgtaaaaacaattttcattggctattggttatgcaaaaaatgaaaaggagagaaaattgaatgtaatttacatttaattttatg 34722722  T
Q  346 ag 347  Q
    ||    
T  34722723 ag 34722724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 224 - 352
Target Start/End: Complemental strand, 3972402 - 3972275
Alignment:
Q  224 ttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaat 323  Q
    |||||||||||||||||| || ||||||||| ||||||||||||||||||||||||| ||||||||||| | | |||||| |||| |||  |||||||||    
T  3972402 ttttttgtgttttctttg-aataagttttatgggaagatgtaaaaacaattttcattagctattggttaggaagaaaatggaagagagaacaaattgaat 3972304  T
Q  324 gtaatttgcatttaattttatgagaataa 352  Q
    |||||||||||||||||| ||||||||||    
T  3972303 gtaatttgcatttaatttcatgagaataa 3972275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 224 - 352
Target Start/End: Original strand, 3997476 - 3997603
Alignment:
Q  224 ttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaat 323  Q
    |||||||||||||||||| || ||||||||| ||||||||||||||||||||||||| ||||||||||| | | |||||| |||| |||  |||||||||    
T  3997476 ttttttgtgttttctttg-aataagttttatgggaagatgtaaaaacaattttcattagctattggttaggaagaaaatggaagagagaacaaattgaat 3997574  T
Q  324 gtaatttgcatttaattttatgagaataa 352  Q
    |||||||||||||||||| ||||||||||    
T  3997575 gtaatttgcatttaatttcatgagaataa 3997603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 178 - 342
Target Start/End: Original strand, 8096968 - 8097132
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||  | |||| |  ||||||| ||||||| || ||| || |||||||||||||||||||||||| |||||||    
T  8096968 aatcacacttattaagaaaactaaaacatagtagtttgcaacatagtttcttgtgttatccttgaaataagttttataggaagatgtaaaaataattttc 8097067  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    ||||| ||||| |||| || ||||||||||| |||| |||||||||| | |||||||||||||||    
T  8097068 attggttattgcttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttaatttt 8097132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 186 - 342
Target Start/End: Original strand, 22479012 - 22479168
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    |||||||||||| |||||||||  | |||| |  ||||||||||||||| |||||| || |||||||||||||||||||||||||| ||||||||||       
T  22479012 ttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacacttttcattggtag 22479111  T
Q  286 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    ||| |||| || ||||||||| | |||| |||||||||| | |||||||||||||||    
T  22479112 ttgattatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttt 22479168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 178 - 342
Target Start/End: Complemental strand, 34195056 - 34194892
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||  | |||| |  ||||||| |||| ||  |  || || ||||||||||||||||||||||||||||||||    
T  34195056 aatcacacttattaagaaaactaaaacatagtagtttgcaacatagtttcttgtcttacccatgaaataagttttataggaagatgtaaaaacaattttc 34194957  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    ||||| |||||||||| || ||||||||||| |||| ||| |||||| | |||||||||||||||    
T  34194956 attggttattggttattgagaaaatgaaagagagagcaaactgaatgcactttgcatttaatttt 34194892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 222 - 352
Target Start/End: Complemental strand, 6752800 - 6752670
Alignment:
Q  222 agttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattga 321  Q
    ||||||||| ||||| |||  || |||||| || | ||||||||||||||||||| ||||||||||||||||||| |||||| |||| |||| ||| |||    
T  6752800 agttttttgggttttttttttaataagtttcatggaaagatgtaaaaacaattttaattggctattggttatggagaaaatggaagagagaggaaaatga 6752701  T
Q  322 atgtaatttgcatttaattttatgagaataa 352  Q
    |||||||||||||||||||| |||| |||||    
T  6752700 atgtaatttgcatttaatttcatgaaaataa 6752670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 178 - 342
Target Start/End: Complemental strand, 10115079 - 10114915
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||  | |||| |  ||| |||||||| || |||||| || ||||||||||||||||||||||||||||||||    
T  10115079 aatcacacttattaagaaaactaaaacatagtagtttgtaacataattttttgtattatctttgaaataagttttataggaagatgtaaaaacaattttc 10114980  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    |||||   ||| |||| || ||||||||| | |||| |||||||||| | ||||| |||||||||    
T  10114979 attggtagttgattatagagaaaatgaaaaatagagcaaattgaatgcactttgcttttaatttt 10114915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 190 - 342
Target Start/End: Original strand, 30454687 - 30454838
Alignment:
Q  190 taagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattgg 289  Q
    |||||||| |||||||||  | |||| |  ||||||| ||||||| || ||| || ||||||||||| ||||||||||||||||||| ||||| ||||||    
T  30454687 taagaaaactaaaacatagtagtttgcaacatagtttcttgtgttatccttgaaataagttttatagaaagatgtaaaaacaatttt-attggttattgg 30454785  T
Q  290 ttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    |||| || ||||||||||| |||| |||||||||| | |||||||||||||||    
T  30454786 ttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttaatttt 30454838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 264 - 352
Target Start/End: Original strand, 46557237 - 46557325
Alignment:
Q  264 taaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||| ||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||| |||||||||| ||||||||||    
T  46557237 taaaaataattttcattggctattagttatggaaaaaatgaaagagagagaaaattaaatgtaatttacatttaatttcatgagaataa 46557325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 222 - 335
Target Start/End: Original strand, 16032981 - 16033094
Alignment:
Q  222 agttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattga 321  Q
    ||||| ||||||| || ||| || ||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||| | || |||||||    
T  16032981 agtttcttgtgttatccttgaaataagttttataggaagatgtaaaaacaattttcattggttattagttattgaaaaaatgaaagagaaagcaaattga 16033080  T
Q  322 atgtaatttgcatt 335  Q
    ||| | ||||||||    
T  16033081 atgcactttgcatt 16033094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 178 - 342
Target Start/End: Complemental strand, 10252179 - 10252015
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||  | |||| |  ||| || ||||| || |||||| || ||||||||||||||||||||||||||||||||    
T  10252179 aatcacacttattaagaaaactaaaacatagtagtttgtaacataattgtttgtattatctttgaaataagttttataggaagatgtaaaaacaattttc 10252080  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    |||||   ||| |||| || ||||||||| | |||| |||||||||| | ||||| |||||||||    
T  10252079 attggtagttgattatagagaaaatgaaaaatagagcaaattgaatgcactttgcttttaatttt 10252015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 178 - 342
Target Start/End: Complemental strand, 21214412 - 21214245
Alignment:
Q  178 aatcacatttattaagaaaattaaaacata--agaa-tttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatt 274  Q
    ||||||| ||||||||||||||||||||||  || | |||| |  ||||||||||||||| | |||| || ||||||||||| |||||||||||||||||    
T  21214412 aatcacacttattaagaaaattaaaacatagtagtagtttgtaacatagttttttgtgttatttttgaaataagttttatagaaagatgtaaaaacaatt 21214313  T
Q  275 ttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    ||||||||   ||| |||| || ||||| ||| | |||| |||||||||| | |||||||||||||||    
T  21214312 ttcattggtagttgattattgagaaaataaaaaagagagcaaattgaatgcactttgcatttaatttt 21214245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 178 - 342
Target Start/End: Original strand, 22455958 - 22456122
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    |||||||  ||||||||||| |||||||||  | |||| |  |||||||||||||||  ||||| || ||||||||||||||||| |||||||||||||     
T  22455958 aatcacaaatattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttaactttgaaataagttttataggaagatataaaaacaattttg 22456057  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    |||||   ||| |||| || ||||||||| | |||| |||||||||| | |||||||||||||||    
T  22456058 attggtagttgattatagagaaaatgaaaaagagagcaaattgaatgcattttgcatttaatttt 22456122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 47866941 - 47867036
Alignment:
Q  256 ggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||| |||||||||| ||||||||||||||||| ||||||| ||| || |||| ||||||||||||||||||||||||||||| |||||||||||||    
T  47866941 ggaatatgtaaaaaccattttcattggctattgattatggagaaagtggaagagagagaaaattgaatgtaatttgcatttaa-tttatgagaataa 47867036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 219 - 342
Target Start/End: Complemental strand, 38401507 - 38401384
Alignment:
Q  219 tatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaat 318  Q
    |||||||||||||||| |||||| || |||||||||||| ||||||||||| ||||||||||||   ||  |||| || ||||||||| | |||||||||    
T  38401507 tatagttttttgtgttatctttgaaataagttttatagggagatgtaaaaataattttcattggtagttaattatagagaaaatgaaaaagagagaaaat 38401408  T
Q  319 tgaatgtaatttgcatttaatttt 342  Q
    | |||||| |||||||||||||||    
T  38401407 taaatgtactttgcatttaatttt 38401384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 352
Target Start/End: Original strand, 33974614 - 33974683
Alignment:
Q  283 ctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||    
T  33974614 ctattggttatggaaaaaatgaaagagaaagaaaatttaatgtaatttgcatttaattttatgagaataa 33974683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 181 - 342
Target Start/End: Original strand, 47443927 - 47444087
Alignment:
Q  181 cacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 280  Q
    ||||||||||||||||| |||||||||  | |||| |  ||||||||||||||| |||||| || || |||||||| ||||||||||||||||||||| |    
T  47443927 cacatttattaagaaaactaaaacatattagtttgtaacatagttttttgtgttatctttgaaataaattttatag-aagatgtaaaaacaattttcact 47444025  T
Q  281 ggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    ||   ||| |||| || ||||||||| | | || |||||||||| | |||||||||||||||    
T  47444026 ggtagttgattatagagaaaatgaaaaagatagcaaattgaatgcactttgcatttaatttt 47444087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 186 - 342
Target Start/End: Original strand, 7886575 - 7886731
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    |||||||||||| |||||||||  | ||||    ||||||| ||||||| |  ||| || || |||||||| ||||||||||||||||||||||||| ||    
T  7886575 ttattaagaaaactaaaacatagtagtttgtgacatagtttcttgtgttattcttgaaataaattttatagaaagatgtaaaaacaattttcattggtta 7886674  T
Q  286 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    || ||||| || ||||||||||| |||| |||||||||| | ||||||||| |||||    
T  7886675 ttagttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttgatttt 7886731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 178 - 342
Target Start/End: Complemental strand, 10014437 - 10014273
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||  | |||| |  ||| || ||||| || |||||| || ||||||||||||||||||||||||||||||||    
T  10014437 aatcacacttattaagaaaactaaaacatagtagtttgtaacataattgtttgtattatctttgaaataagttttataggaagatgtaaaaacaattttc 10014338  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    |||||   ||| |||| || ||||| ||| | |||| |||||||||| | ||||| |||||||||    
T  10014337 attggtagttgattatagagaaaataaaaaatagagtaaattgaatgcactttgcttttaatttt 10014273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 220 - 342
Target Start/End: Original strand, 46918205 - 46918327
Alignment:
Q  220 atagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaatt 319  Q
    ||||||| ||||||| || ||  || ||||||||||||||||| ||||||||||||||||||| |||||||||| || ||||||||||| || | ||||     
T  46918205 atagtttcttgtgttatccttaaaataagttttataggaagatctaaaaacaattttcattggttattggttattgagaaaatgaaagagagtgcaaatg 46918304  T
Q  320 gaatgtaatttgcatttaatttt 342  Q
    ||||| | |||||| ||||||||    
T  46918305 gaatgcactttgcacttaatttt 46918327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 178 - 302
Target Start/End: Original strand, 8769529 - 8769651
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||| |||| |||||||||||||| ||||||| |||  |||||| || || ||||| |||||||| ||||||     
T  8769529 aatcacacttattaagaaaactaaaacataacaattaggagtatagtttttggtgtttttttt--aaaaagattcatgggaagttgtaaaaataattttt 8769626  T
Q  278 attggctattggttatggaaaaaat 302  Q
    |||||||| || ||||||| |||||    
T  8769627 attggctaatgattatggagaaaat 8769651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 180 - 288
Target Start/End: Original strand, 33973518 - 33973627
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagtttt-ttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttca 278  Q
    ||||| ||||||| |||| ||||| |||| |||||||||||||||||| |||||||||||||  |||||||||||||| |||| || |||| ||||||||    
T  33973518 tcacacttattaacaaaactaaaatataaaaatttggagtatagtttttttgtgttttctttaaaaaaagttttatagaaagacgtcaaaataattttca 33973617  T
Q  279 ttggctattg 288  Q
     |||||||||    
T  33973618 gtggctattg 33973627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 263 - 352
Target Start/End: Complemental strand, 38674959 - 38674870
Alignment:
Q  263 gtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||||||| |||||| ||||| | ||||||||||| |||||||||||||| ||||||| ||||||||| || |||||||    
T  38674959 gtaaaaacaattttcattgactattgattatgaagaaaatgaaagagagagaaaattgaatctaatttgtatttaatttcataagaataa 38674870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 296 - 352
Target Start/End: Original strand, 48802548 - 48802604
Alignment:
Q  296 aaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  48802548 aaaaaatgaaagagagagaaaattgaatgtaatttgcatttacttttatgagaataa 48802604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 277
Target Start/End: Original strand, 25242127 - 25242227
Alignment:
Q  177 taatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 276  Q
    |||||||| |||||||||||| |||||||||  | |||| |  ||||||||||||||| |||||  || ||||||||||| |||||| ||||||||||||    
T  25242127 taatcacacttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttaaaataagttttatagaaagatgaaaaaacaatttt 25242226  T
Q  277 c 277  Q
    |    
T  25242227 c 25242227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 46557120 - 46557219
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatag-ttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttt 276  Q
    |||||||||||||||||||| |||| |||||||||||  |  |||| ||||||||||||||||| ||| |||||| || |||||||||||||| ||||||    
T  46557120 aatcacatttattaagaaaactaaagcataagaattt-tatcatagtttttttgtgttttctttagaataagtttcatgggaagatgtaaaaataatttt 46557218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 51309578 - 51309415
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||||||||||||||||| ||||||||  | ||||  ||||| ||||||||||| |  |||||| |||||| |||| |||||||| |||||||| | ||    
T  51309578 tcacatttattaagaaaataaaaacatagtagtttgaggtataattttttgtgttcttcttggaataagtttcatagaaagatgtataaacaattcttat 51309479  T
Q  280 tggctattggttatggaaaaaat-gaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| || || ||||||| | ||| |||||   ||  |||||||||| ||||||||||||||||||    
T  51309478 tggttaatgattatggagagaatagaaag-gggaacaaattgaatgcaatttgcatttaatttta 51309415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 178 - 342
Target Start/End: Original strand, 2994365 - 2994532
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaag----atgtaaaaacaat 273  Q
    ||||||| |||||||||||| ||||| |||  | |||| |  ||||||||||||||| |  ||| || |||||||||||||||    |||||||| ||||    
T  2994365 aatcacacttattaagaaaactaaaatatagtagtttgtaacatagttttttgtgttatgcttgaaataagttttataggaaggaagatgtaaaa-caat 2994463  T
Q  274 tttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    |||||||||   ||| |||| || ||||||||| | |||| |||||||||| | |||||||||||||||    
T  2994464 tttcattggtagttgattatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttt 2994532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 189 - 304
Target Start/End: Original strand, 3084141 - 3084256
Alignment:
Q  189 ttaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattg 288  Q
    ||||||||| ||||| || |||||||| |||||| ||| ||||||  || ||  ||  |||||||| |||||||||||||||||| |||||||| ||||     
T  3084141 ttaagaaaactaaaatatgagaatttgaagtataatttcttgtgtcctccttaaaattagttttatgggaagatgtaaaaacaatattcattggttattt 3084240  T
Q  289 gttatggaaaaaatga 304  Q
    |||||||| |||||||    
T  3084241 gttatggagaaaatga 3084256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 370 - 417
Target Start/End: Original strand, 14752382 - 14752429
Alignment:
Q  370 aagataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  14752382 aagataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 14752429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 31126377 - 31126214
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| ||| || ||   |||||  ||||| ||||||||||| || ||| || ||||||||| | |||||||||||| |||||||||    
T  31126377 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgaaataagttttatggaaagatgtaaaaataattttcat 31126278  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| ||    ||||||| ||||| |||   |||  |||||||||| ||||||||||||||||||    
T  31126277 tggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 31126214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 178 - 295
Target Start/End: Original strand, 8764629 - 8764744
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||||| |||| |||||||||| |||| ||||||||| |||||||||||| |||  |||||  || || ||||| |||||||| ||||||     
T  8764629 aatcacacttattaaaaaaactaaaacataacaattaggagtatagctttttgtgtttttttt--aaaaaaattcatgggaagttgtaaaaataattttt 8764726  T
Q  278 attggctattggttatgg 295  Q
    |||||||| || ||||||    
T  8764727 attggctaatgattatgg 8764744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 184 - 272
Target Start/End: Complemental strand, 17587867 - 17587779
Alignment:
Q  184 atttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaa 272  Q
    |||||||||||||| |||||||||  |||||| | |||||||| || |||| |  ||| || |||||||||||||||||||||||||||    
T  17587867 atttattaagaaaactaaaacatagtaatttgcaatatagtttcttttgttattcttgaaataagttttataggaagatgtaaaaacaa 17587779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 342
Target Start/End: Complemental strand, 48291922 - 48291826
Alignment:
Q  246 aagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    ||||||||||||||| |||||||| ||||||||||||   ||| |||  |||||||||||| | |||| |||||||||| | ||| |||||||||||    
T  48291922 aagttttataggaaggtgtaaaaataattttcattggtagttgattacagaaaaaatgaaaaagagagcaaattgaatgcactttccatttaatttt 48291826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 343
Target Start/End: Complemental strand, 1335231 - 1335112
Alignment:
Q  224 ttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaat 323  Q
    ||||||||||| || |||||| |||||| || | |||||||||||| |||||| ||||| ||    ||||||| ||||| |||  ||||  |||||||||    
T  1335231 ttttttgtgttctccttggaataagtttcatggaaagatgtaaaaataatttttattggttaaaaattatggagaaaataaaaagaagaacaaattgaat 1335132  T
Q  324 gtaatttgcatttaatttta 343  Q
    | ||||||||||||||||||    
T  1335131 gcaatttgcatttaatttta 1335112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 9264071 - 9264008
Alignment:
Q  289 gttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||| ||| ||||||||||| ||| ||||||  |||||||||||||||||||||||||||||||    
T  9264071 gttacggagaaaatgaaagagagataaaattagatgtaatttgcatttaattttatgagaataa 9264008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 55400903 - 55400740
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| ||| || ||   |||||  ||||| ||||||||||| ||||||||| |||||| || | |||||||||||| |||| ||||    
T  55400903 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctctttggaataagtttcatggaaagatgtaaaaataattctcat 55400804  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    ||| ||    ||||||| ||||| |||    ||  |||||||||| ||||||||||||||||||    
T  55400803 tggttaaaaattatggagaaaataaaaaggtgaacaaattgaatgcaatttgcatttaatttta 55400740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 225 - 352
Target Start/End: Original strand, 41936195 - 41936313
Alignment:
Q  225 tttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatg 324  Q
    |||||||||||| ||| ||| |||||| || ||||||||||||| ||||||| |||||       ||||||| ||||||  |||  ||||||||||||||    
T  41936195 tttttgtgttttatttagaataagtttcatgggaagatgtaaaatcaattttaattgg-------ttatggagaaaatgggaga--gagaaaattgaatg 41936285  T
Q  325 taatttgcatttaattttatgagaataa 352  Q
     |||||||||||| ||| ||||||||||    
T  41936286 caatttgcatttagtttcatgagaataa 41936313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 54725628 - 54725670
Alignment:
Q  246 aagttttataggaagatgtaaaaacaattttcattggctattg 288  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  54725628 aagttttataggaagatgtaaaaacaattttcattggttattg 54725670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 6075030 - 6074985
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||    
T  6075030 gataaatgtttgtcttttttgcttatattttgggacaatgaaaatg 6074985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 417
Target Start/End: Original strand, 7866659 - 7866704
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||    
T  7866659 gataaaagtttgtcttttttgtttatattttgggacaaagaaaatg 7866704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 417
Target Start/End: Original strand, 22479211 - 22479256
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||    
T  22479211 gataaaagtttgtcttttttgcttataatttgggacaaagaaaatg 22479256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 293
Target Start/End: Complemental strand, 31292777 - 31292664
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| ||||| | |||| ||||||||   |||||| |||||| ||| || |||| || ||||||  |||| ||| ||||||||||||||||||||||||    
T  31292777 tcacacttattgaaaaaactaaaacatggtaatttgaagtataatttcttttgttctccttggaattagttctatgggaagatgtaaaaacaattttcat 31292678  T
Q  280 tggctattggttat 293  Q
    ||| |||| |||||    
T  31292677 tggttatttgttat 31292664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 37074906 - 37074861
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||    
T  37074906 gataaaagtttgtcttttttgcttatatttcgggacaaagaaaatg 37074861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 51426706 - 51426621
Alignment:
Q  258 aagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    |||||||||||| |||||||||||| ||    ||||||| ||||| |||  ||||  |||||||||||||||||||||||||||||    
T  51426706 aagatgtaaaaataattttcattggttaaaaattatggagaaaataaaaagaagaacaaattgaatgtaatttgcatttaatttta 51426621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 280
Target Start/End: Complemental strand, 6784450 - 6784390
Alignment:
Q  220 atagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcatt 280  Q
    ||||||||||||||| |||||  || || ||||||||||||||||||||| ||||||||||    
T  6784450 atagttttttgtgttatctttcaaataaattttataggaagatgtaaaaataattttcatt 6784390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 343
Target Start/End: Complemental strand, 21654410 - 21654247
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| ||| || ||   |||||  ||||| ||||||||||| || ||| || |||||| || | |||||||||||| |||||||||    
T  21654410 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgaaataagtttcatggaaagatgtaaaaataattttcat 21654311  T
Q  280 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttta 343  Q
    | | ||    ||||||| ||||| |||   |||  |||||||||| ||||||||||||||||||    
T  21654310 ttgttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 21654247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 370 - 417
Target Start/End: Complemental strand, 28875356 - 28875309
Alignment:
Q  370 aagataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||| | |||||||||||||||||||||||| |||||||    
T  28875356 aagataaaagtttatattttttgcttatattttgggacaatgaaaatg 28875309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 312 - 347
Target Start/End: Complemental strand, 34722599 - 34722564
Alignment:
Q  312 agaaaattgaatgtaatttgcatttaattttatgag 347  Q
    ||||||||||||||||||||||||||||||||||||    
T  34722599 agaaaattgaatgtaatttgcatttaattttatgag 34722564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 417
Target Start/End: Original strand, 33974738 - 33974780
Alignment:
Q  375 aaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||||||||||||||||||| ||||| |||||||    
T  33974738 aaaagtttgtcttttttgcttatattttgagacaaagaaaatg 33974780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 341
Target Start/End: Original strand, 23209236 - 23209393
Alignment:
Q  184 atttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggc 283  Q
    |||||||||||||||||||| ||   | ||||   |||||||| | ||||| |  ||| || ||||||||||| |||||| ||||| |||||| |||||     
T  23209236 atttattaagaaaattaaaatattgtagtttgtgatatagtttctcgtgttattcttgaaataagttttatagaaagatgaaaaaataatttttattggt 23209335  T
Q  284 tattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattt 341  Q
    |||| ||||  || ||||||||||  |||  | | |||||| ||||||||||||||||    
T  23209336 tattagttagagagaaaatgaaagggagaacataatgaatgcaatttgcatttaattt 23209393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 2927235 - 2927191
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||||||||||||||||||||  ||||| |||||||    
T  2927235 ataaaagtttgtcttttttgcttatattttaagacaaagaaaatg 2927191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 2878253 - 2878210
Alignment:
Q  201 aaacataagaatttggagtatagttttttgtgttttctttggaa 244  Q
    |||||||||||||| || |||||||||||||||| |||||||||    
T  2878253 aaacataagaatttagaatatagttttttgtgttatctttggaa 2878210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 350
Target Start/End: Original strand, 8769644 - 8769683
Alignment:
Q  311 gagaaaattgaatgtaatttgcatttaattttatgagaat 350  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  8769644 gagaaaattgaacgtaatttgcatttaatttaatgagaat 8769683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 416
Target Start/End: Original strand, 16739315 - 16739358
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaat 416  Q
    ||||||||| ||||||||||||||||||||| ||||| ||||||    
T  16739315 ataaaagttggtcttttttgcttatattttgagacaaagaaaat 16739358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 302
Target Start/End: Complemental strand, 30612276 - 30612221
Alignment:
Q  247 agttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaat 302  Q
    ||||| |||| ||||||||||||||||| ||||||| || || |||||||||||||    
T  30612276 agtttcatagaaagatgtaaaaacaattctcattggttaatgattatggaaaaaat 30612221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 324
Target Start/End: Complemental strand, 36151061 - 36150946
Alignment:
Q  210 aatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaa-acaattttcattggctattggttatggaaaaaatgaaaga 308  Q
    ||||| |||| ||||||||||  ||||  || ||| ||||||||| ||||||||||||| | |||||| ||||| ||||| ||||||| |||||| ||      
T  36151061 aatttcgagtgtagttttttgcttttttcttagaataagttttatgggaagatgtaaaacataatttttattggttattgattatggagaaaatggaaat 36150962  T
Q  309 aagagaaaattgaatg 324  Q
    ||||| ||||| ||||    
T  36150961 aagagtaaattaaatg 36150946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 47866874 - 47866921
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagtt 225  Q
    ||||||| ||||||| || | |||||||||||||||||||||||||||    
T  47866874 aatcacacttattaaaaagactaaaacataagaatttggagtatagtt 47866921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 417
Target Start/End: Original strand, 54465065 - 54465112
Alignment:
Q  370 aagataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||| ||| ||||||||||||||||||| |||||| |||||||    
T  54465065 aagataaaaatttatcttttttgcttatattttaggacaaagaaaatg 54465112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 6438028 - 6437982
Alignment:
Q  372 gataaaagtttgtctttttt-gcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||| |||||| |||||||||||||||||| |||||||    
T  6438028 gataaaagtttgtttttttttgcttatattttgggacaaagaaaatg 6437982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 417
Target Start/End: Original strand, 26725167 - 26725213
Alignment:
Q  371 agataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||||||||||| |||| ||||| ||||||| ||||||    
T  26725167 agataaaagtttgtcttttttacttacattttaggacaacaaaaatg 26725213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 32322194 - 32322296
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||||||| || ||   |||||  ||||| ||||||||||| || |||||| |||||| || | |||||| ||||| |||| ||||    
T  32322194 tcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgcaaaaataattctcat 32322293  T
Q  280 tgg 282  Q
    |||    
T  32322294 tgg 32322296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 282
Target Start/End: Complemental strand, 34022764 - 34022662
Alignment:
Q  180 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 279  Q
    ||||| |||||||||||| ||| || ||   |||||  ||||| ||||||||||| || ||| || ||||||||| | |||||||||||| |||| ||||    
T  34022764 tcacacttattaagaaaactaatacttagtgatttgaggtataattttttgtgttctccttgaaataagttttatggaaagatgtaaaaataattctcat 34022665  T
Q  280 tgg 282  Q
    |||    
T  34022664 tgg 34022662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 36509540 - 36509582
Alignment:
Q  310 agagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||| ||||||||||| |||||||||| ||||||||||    
T  36509540 agagaaaatcgaatgtaatttacatttaatttgatgagaataa 36509582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 304
Target Start/End: Original strand, 45868536 - 45868582
Alignment:
Q  258 aagatgtaaaaacaattttcattggctattggttatggaaaaaatga 304  Q
    ||||||||||||||||||||||||| |||| |||| ||| |||||||    
T  45868536 aagatgtaaaaacaattttcattggttatttgttacggagaaaatga 45868582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 417
Target Start/End: Original strand, 2994575 - 2994620
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||||||| ||||| |||||| |||||||||| |||||||    
T  2994575 gataaaagtttgtcattttttcttataatttgggacaaagaaaatg 2994620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 350
Target Start/End: Original strand, 8764746 - 8764783
Alignment:
Q  313 gaaaattgaatgtaatttgcatttaattttatgagaat 350  Q
    |||||||||| |||||||||||||||||| ||||||||    
T  8764746 gaaaattgaacgtaatttgcatttaatttaatgagaat 8764783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 409
Target Start/End: Original strand, 8764837 - 8764874
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||||||||||||||||||||||| |||||| |||||    
T  8764837 gataaaagtttgtcttttttgcttaaattttgcgacaa 8764874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 406
Target Start/End: Complemental strand, 19464021 - 19463988
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttggga 406  Q
    ||||||||||||||||| ||||||||||||||||    
T  19464021 ataaaagtttgtcttttctgcttatattttggga 19463988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 21214202 - 21214157
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||  ||||||||||||||| |||||||||| |||||||    
T  21214202 gataaaagttgatcttttttgcttataatttgggacaaagaaaatg 21214157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 417
Target Start/End: Original strand, 22456165 - 22456210
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||| |||||||||||||||| ||||||| || |||||||    
T  22456165 gataaaagttggtcttttttgcttataatttgggataaagaaaatg 22456210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 409
Target Start/End: Complemental strand, 31836900 - 31836863
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  31836900 gataaaagtttgtattttttgcttacattttgggacaa 31836863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 38401341 - 38401296
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||  ||||||||||||||| |||||||||| |||||||    
T  38401341 gataaaagttgatcttttttgcttataatttgggacaaagaaaatg 38401296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 417
Target Start/End: Original strand, 46711835 - 46711880
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||||| |||| ||||||||||||| ||||| |||||||    
T  46711835 gataaaagtttgttttttatgcttatattttgagacaaagaaaatg 46711880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 417
Target Start/End: Original strand, 50651213 - 50651258
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    ||||||||||| |||||||||||||||| |||| |||| |||||||    
T  50651213 gataaaagtttatcttttttgcttatatattggaacaaagaaaatg 50651258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 409
Target Start/End: Complemental strand, 3972213 - 3972177
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  3972213 ataaaagtttatcttttttgcttacattttgggacaa 3972177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 409
Target Start/End: Original strand, 3997665 - 3997701
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  3997665 ataaaagtttatcttttttgcttacattttgggacaa 3997701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 416
Target Start/End: Complemental strand, 6752615 - 6752571
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaat 416  Q
    |||||||||||||||||||| |||| ||||| |||||| ||||||    
T  6752615 gataaaagtttgtcttttttacttaaattttaggacaaagaaaat 6752571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 409
Target Start/End: Complemental strand, 21654204 - 21654168
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  21654204 ataaaagttggtcttttttgcttatattttgagacaa 21654168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 409
Target Start/End: Complemental strand, 28793121 - 28793085
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  28793121 ataaaagttggtcttttttgcttatattttgagacaa 28793085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 45347828 - 45347872
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||  |||||||||||||||||||| ||||| |||||||    
T  45347828 ataaaagttgatcttttttgcttatattttgagacaaagaaaatg 45347872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #118
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 45781357 - 45781313
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||  |||||||||||||||||||| ||||| |||||||    
T  45781357 ataaaagttgatcttttttgcttatattttgagacaaagaaaatg 45781313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #119
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 282
Target Start/End: Complemental strand, 45781524 - 45781460
Alignment:
Q  218 gtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattgg 282  Q
    ||||| ||||||||||| ||||| ||| |||||| || | |||||||||||| |||| |||||||    
T  45781524 gtataattttttgtgttctctttagaataagtttcatggaaagatgtaaaaataattctcattgg 45781460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #120
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 408
Target Start/End: Complemental strand, 49583926 - 49583890
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggaca 408  Q
    |||||||||| |||||||||||||||| |||||||||    
T  49583926 gataaaagttggtcttttttgcttataatttgggaca 49583890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 171; Significance: 1e-91; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 178 - 419
Target Start/End: Complemental strand, 78127 - 77885
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  78127 aatcacacttattaagaaaactaaaacataagaatttagagtatagttttttgtgttttctttgaaaaaagttgtataggaagatgtaaaaacaattttc 78028  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaat-aacnnnnnnnntcttggaaaagataa 376  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||        ||||| |||||||||    
T  78027 attggccattggttatggaaaaaatgaaagaaagtgaaaattgaatgtaatttacatttaattttatgagaataaacaaaaaaaatcttgaaaaagataa 77928  T
Q  377 aagtttgtcttttttgcttatattttgggacaacgaaaatgtg 419  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  77927 aagtttgtcttttttgcttatattttgggacaaagaaaatgtg 77885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 157; Significance: 3e-83; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 186 - 409
Target Start/End: Complemental strand, 10207 - 9983
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  10207 ttattaagaaaattaaaacataagaatttggaatgtagttttttgtgttttctttagaaaaagttttataggaagatgtaaaaacaattttcattgacta 10108  T
Q  286 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaat-aacnnnnnnnntcttggaaaagataaaagtttgt 384  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||        |||| |||||||||||||||||     
T  10107 ttggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattgtatgagaataaacaaaaaaaatcttagaaaagataaaagtttgc 10008  T
Q  385 cttttttgcttatattttgggacaa 409  Q
    ||||||| |||||||||||||||||    
T  10007 cttttttacttatattttgggacaa 9983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 149; Significance: 2e-78; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 206 - 409
Target Start/End: Original strand, 3447 - 3651
Alignment:
Q  206 taagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaa 305  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3447 taagaatttggagtatagttttttgtgttttcttttgaaaaagttttataggaagatgtaaaaataattttcattggctattggttatggaaaaaatgaa 3546  T
Q  306 agaaagagaaaattgaatgtaatttgcatttaattttatgagaat-aacnnnnnnnntcttggaaaagataaaagtttgtcttttttgcttatattttgg 404  Q
    ||| ||||||||||||||||||||||||||||||| ||||||||| |||        |||| |||||||||||||||| |||||||||||||||||||||    
T  3547 agagagagaaaattgaatgtaatttgcatttaattgtatgagaataaacaacaacaatcttagaaaagataaaagtttatcttttttgcttatattttgg 3646  T
Q  405 gacaa 409  Q
    |||||    
T  3647 gacaa 3651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 135; Significance: 3e-70; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 44762 - 44936
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||  |||||||||||||    
T  44762 aatcacatttattaagaaaactaaaacataataatttggagtatatttttttgtgttttctttggaaaaagttttataggaatattaaaaaacaattttc 44861  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||| ||||||||    
T  44862 attggctattggttatggaaaaaatgaaagagagggaaaattaaatgtaatttgcatttaattttacgagaataa 44936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 184 - 416
Target Start/End: Complemental strand, 155024 - 154792
Alignment:
Q  184 atttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggc 283  Q
    |||||||||||||| |||||||||||||| || | |||||||||| || ||||||||| |||||||||||||| |||||||||||||||||| |||||||    
T  155024 atttattaagaaaactaaaacataagaatctgaaatatagttttt-gtattttctttgaaaaaagttttatagaaagatgtaaaaacaatttacattggc 154926  T
Q  284 tattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaat-aacnnnnnnnntcttggaaaagataaaagttt 382  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||         ||||| |||||||||||||||    
T  154925 tattggttatggaaaaaatgaaagatagagaaaatttaatgtaatttgcatttaattttatgagaataaaaaaaaaaaatcttgaaaaagataaaagttt 154826  T
Q  383 gtcttttttgcttatattttgggacaacgaaaat 416  Q
     |||||||| ||||||||||| ||||| ||||||    
T  154825 atcttttttacttatattttgagacaaagaaaat 154792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 115; Significance: 3e-58; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 186 - 352
Target Start/End: Complemental strand, 157956 - 157790
Alignment:
Q  186 ttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcta 285  Q
    |||||||||||| |||| |||||||||||| || ||||||||||||||||||||||||| |||||| || || ||||||||||||||||||||||||| |    
T  157956 ttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagtttcatggggagatgtaaaaacaattttcattggcaa 157857  T
Q  286 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||| ||||||||||    
T  157856 ttggttatggaaaaaataaaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataa 157790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 52593 - 52767
Alignment:
Q  178 aatcacatttattaagaaaatta---aaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatt 274  Q
    ||||||||||||||| |||||||   ||| |||||||||| |||||   ||||||||| ||| |||  || |||||| || | || ||||||||||||||    
T  52593 aatcacatttattaataaaattagtaaaatataagaatttagagtagt-ttttttgtgattttttt--aataagtttgatggaaatatgtaaaaacaatt 52689  T
Q  275 ttcattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||||| |||||| ||||||| |||||  |||| |||||||||| ||||||||| ||||||||||| |||| |||||    
T  52690 ttcattgactattgattatggagaaaatagaagagagagaaaattaaatgtaattcgcatttaatttcatgaaaataa 52767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 373 - 416
Target Start/End: Complemental strand, 157737 - 157694
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaacgaaaat 416  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  157737 ataaaagtttgtcttttttgcttatattttgggacaaagaaaat 157694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 111; Significance: 7e-56; HSPs: 4)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 1182 - 1008
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||||||||||  |||| ||||| |||| ||||||||||||||||||||||||||| |||  |||||||||||||| |||||||||||||| |||||    
T  1182 aatcacatttattataaaaactaaaatataaaaatttggagtatagttttttgtgtttttttttaaaaaagttttatagaaagatgtaaaaacagttttc 1083  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||  |||||||||||||||||||||||||  ||||||||| |||||||||||| |||||||||||||||||||    
T  1082 attgagtattggttatggaaaaaatgaaagagggagaaaattcaatgtaatttgcgtttaattttatgagaataa 1008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 9142 - 8968
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||||||||||  |||| ||||| |||| ||||||||||||||||||||||||||| |||  |||||||||||||| |||||||||||||| |||||    
T  9142 aatcacatttattataaaaactaaaatataaaaatttggagtatagttttttgtgtttttttttaaaaaagttttatagaaagatgtaaaaacagttttc 9043  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    ||||  |||||||||||||||||||||||||  ||||||||| |||||||||||| |||||||||||||||||||    
T  9042 attgagtattggttatggaaaaaatgaaagagggagaaaattcaatgtaatttgcgtttaattttatgagaataa 8968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 956 - 911
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  956 gataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 372 - 417
Target Start/End: Complemental strand, 8916 - 8871
Alignment:
Q  372 gataaaagtttgtcttttttgcttatattttgggacaacgaaaatg 417  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  8916 gataaaagtttgtcttttttgcttatattttgggacaaagaaaatg 8871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 96; Significance: 6e-47; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 205 - 352
Target Start/End: Complemental strand, 40321 - 40175
Alignment:
Q  205 ataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatga 304  Q
    ||||||||||| ||||||| |||||||||||||||||||| || |||||||| ||| |||||||||||||||||||||||||||||||| |||||||||     
T  40321 ataagaatttg-agtatagctttttgtgttttctttggaataaattttatagaaagttgtaaaaacaattttcattggctattggttatagaaaaaatgg 40223  T
Q  305 aagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    | || ||||||| |||||||||||||||||||||||| ||||||||||    
T  40222 atgagagagaaagttgaatgtaatttgcatttaatttcatgagaataa 40175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 222 - 352
Target Start/End: Complemental strand, 160376 - 160246
Alignment:
Q  222 agttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggttatggaaaaaatgaaagaaagagaaaattga 321  Q
    ||||||||||||||||||||||| ||  || || ||||||||||||| || ||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  160376 agttttttgtgttttctttggaataaaattcatgggaagatgtaaaaccagttttcattggctattggttatgggaaaaatggaagaaagagaaaattga 160277  T
Q  322 atgtaatttgcatttaattttatgagaataa 352  Q
    |||||||||  ||||||||| || |||||||    
T  160276 atgtaatttatatttaatttcataagaataa 160246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 178 - 342
Target Start/End: Original strand, 5866 - 6030
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||||||||||||||||||||  | |||| | |||||||||||||||| || ||| || ||||||||||||||||||||||||||||||||    
T  5866 aatcacacttattaagaaaattaaaacatagtagtttgtaatatagttttttgtgttatcattgaaataagttttataggaagatgtaaaaacaattttc 5965  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
     |||    ||| |||| |||||||||||| | |||| |||||||||| | |||||||||||||||    
T  5966 cttgatagttgattatagaaaaaatgaaaaagagagtaaattgaatgcactttgcatttaatttt 6030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 233478 - 233652
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgtttt-ctttggaaaaagttttataggaagatgtaaaaacaatttt 276  Q
    |||||||||||||||||||| ||||| ||||||||||    ||||||| |||||||||| ||||  || |||||| || |||||||||||||||| ||||    
T  233478 aatcacatttattaagaaaactaaaatataagaatttaatatatagttatttgtgtttttctttaaaataagtttcatgggaagatgtaaaaaca-tttt 233576  T
Q  277 cattggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 352  Q
    |||||||||| | |||   | |||||| |||| || || |||||||||||||||||||||||||| ||||||||||    
T  233577 cattggctatggattaaaaagaaaatggaagagagtgataattgaatgtaatttgcatttaatttcatgagaataa 233652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 178 - 321
Target Start/End: Original strand, 160910 - 161053
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||||||||||||||||||||  | |||| |  ||||||| ||||||| || ||| || |||||| |||| ||| ||||||||||||||||    
T  160910 aatcacacttattaagaaaattaaaacatagtagtttgcaacatagtttcttgtgttatccttgaaataagtttgatagaaagttgtaaaaacaattttc 161009  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattga 321  Q
    ||||| |||| ||||| || |||||||||||||||| |||||||    
T  161010 attggttatttgttattgagaaaatgaaagaaagagcaaattga 161053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 178 - 342
Target Start/End: Complemental strand, 3338 - 3174
Alignment:
Q  178 aatcacatttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttc 277  Q
    ||||||| ||||||||||||||||||||||  | |||| |  ||||||||||||||| |||||| || ||||||||||||||||| |||||||||||| |    
T  3338 aatcacacttattaagaaaattaaaacatagtagtttgtaacatagttttttgtgttatctttgaaataagttttataggaagatctaaaaacaatttcc 3239  T
Q  278 attggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttt 342  Q
    |||||   ||| |||| || ||||||||| | | |  |||||||||| | ||||||| |||||||    
T  3238 attggtagttgattatagagaaaatgaaaaagaaaacaaattgaatgcactttgcatataatttt 3174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1786 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 189 - 302
Target Start/End: Complemental strand, 997 - 893
Alignment:
Q  189 ttaagaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattg 288  Q
    |||| |||||||||||||||||||||| |||||||||||         |||||||| ||||||||||| ||||| |||||| ||||||||||| ||||||    
T  997 ttaaaaaaattaaaacataagaatttgaagtatagtttt---------ctttggaataagttttatagaaagatataaaaataattttcattgactattg 907  T
Q  289 gttatggaaaaaat 302  Q
    |||||||| |||||    
T  906 gttatggagaaaat 893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1157 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold1157
Description:

Target: scaffold1157; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 210 - 292
Target Start/End: Original strand, 1690 - 1772
Alignment:
Q  210 aatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggctattggtta 292  Q
    |||||||| |||| ||| |||||||||| ||||||  ||||| || |||||||||||||||| |||||||||| |||| ||||    
T  1690 aatttggattataatttattgtgttttccttggaattagtttcatgggaagatgtaaaaacatttttcattggttatttgtta 1772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 409
Target Start/End: Complemental strand, 4590 - 4554
Alignment:
Q  373 ataaaagtttgtcttttttgcttatattttgggacaa 409  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  4590 ataaaagttggtcttttttgcttatattttgagacaa 4554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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