View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0730_low_12 (Length: 439)
Name: NF0730_low_12
Description: NF0730
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0730_low_12 |
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Alignment Details
Target: chr2 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 1 - 349
Target Start/End: Original strand, 36606120 - 36606468
Alignment:
| Q |
1 |
atatcttgaaggtttttgatttcttgtgtgactttggcagacggaacatcaaactcaacggcatcagatgtagttgtttgatttataagaaaactatcat |
100 |
Q |
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| T |
36606120 |
atatcttgaaggtttttgatttcttgtgtgactttggcagacggaacatcacactcaacgacatcagatgtagttgtttgatttataagaaaactatcat |
36606219 |
T |
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| Q |
101 |
acattactgagtgatccagagttaacctgggacttactttctcattacaagtaatggtattttgaaaagttggtgtaaacggagaggattcaccagaaat |
200 |
Q |
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| T |
36606220 |
acattactgagtgatccagagttaacctgggacttactttctcattacgagtaatggtattctgaaaagttggtgtaaactgagaggattcaccagaaat |
36606319 |
T |
|
| Q |
201 |
attttcatcaggaccatcactgttggcacgtgatcccacaatttcagtgtgattaaaactcccatgttcagggggtgttggttcactcaagtcaataaaa |
300 |
Q |
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| T |
36606320 |
attttcatcaggaccaccactgttggcacgtgatcccacaatttcagtgtgattaaaactcccatgttcagggggtgttggttcactcaagtcaataaaa |
36606419 |
T |
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| Q |
301 |
gtgtttgcgaagtcaaaaagttcaaatccttgaatggagactgatgatg |
349 |
Q |
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| T |
36606420 |
gtgtttgcaaagtcaaaaagttcaaatccttgaatagagactgaagatg |
36606468 |
T |
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