View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0730_low_22 (Length: 301)
Name: NF0730_low_22
Description: NF0730
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0730_low_22 |
 | |
|
| [»] scaffold0517 (1 HSPs) |
| | |
|
| [»] scaffold0206 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 222; Significance: 1e-122; HSPs: 13)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 21 - 254
Target Start/End: Complemental strand, 26059857 - 26059624
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
26059857 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaactaaaatgctcaggataaacagagattgaataaaatttcgtagataactgaa |
26059758 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26059757 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
26059658 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtttcatctcac |
254 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
26059657 |
aaaaaattggttttgctaaaatgtttcatgtcac |
26059624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 21 - 254
Target Start/End: Original strand, 21633384 - 21633617
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
21633384 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
21633483 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21633484 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
21633583 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtttcatctcac |
254 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
21633584 |
aaaaaattggttttgctaaaatgtttcatgtcac |
21633617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 21 - 249
Target Start/End: Original strand, 4358308 - 4358536
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
4358308 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaactaaaatgctcaggttaaacagagattgaataaaatttcgtagataactgaa |
4358407 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4358408 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
4358507 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtttcat |
249 |
Q |
| |
|
|||| |||||||||||||||||||||||| |
|
|
| T |
4358508 |
aaaatattggttttgctaaaatgtttcat |
4358536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 21 - 254
Target Start/End: Original strand, 21634247 - 21634480
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||| || |
|
|
| T |
21634247 |
acatcatcacctcaattcaattctacaacgatattgaacacttattaactaaaatgctcaggataaacagagattaaataaaatttcgtagataactaaa |
21634346 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
21634347 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcactaactaaactaactttgataaacgatatttat |
21634446 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtttcatctcac |
254 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
21634447 |
aaaaaattggttttgctaaaatgtttcatgtcac |
21634480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 21 - 245
Target Start/End: Complemental strand, 26060730 - 26060506
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
26060730 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
26060631 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
26060630 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagagaagttgtcgctaactaaactaactttgataaacaatatttag |
26060531 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtt |
245 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
26060530 |
aaaaaattggttttgctaaaatgtt |
26060506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 21 - 245
Target Start/End: Original strand, 4357435 - 4357659
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
4357435 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
4357534 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
4357535 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacaagagaagttgtcgctaactaaactaactttgataaacaatatttag |
4357634 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtt |
245 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
4357635 |
aaaaaattggttttgctaaaatgtt |
4357659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 21 - 245
Target Start/End: Complemental strand, 26060295 - 26060071
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
26060295 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaacttaaatgcacaggataaacagagattgaataaaatttcgtagataactgaa |
26060196 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||| |||||| |||||||||| |
|
|
| T |
26060195 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagataagctgtcgctaactaaacaaactatgataaccgatatttat |
26060096 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtt |
245 |
Q |
| |
|
||||||||||| ||||||||||||| |
|
|
| T |
26060095 |
aaaaaattggtcttgctaaaatgtt |
26060071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 21 - 245
Target Start/End: Original strand, 4357870 - 4358094
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||| ||| |||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
4357870 |
acatcatcacctcaatttaattctacaacgatattgaacacttatcaacttaaatgcacagaataaacagagattgaataaaatttcgtagataactgaa |
4357969 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||| |||||| |||||||||| |
|
|
| T |
4357970 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagataagctgtcgctaactaaacaaactatgataaccgatatttat |
4358069 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtt |
245 |
Q |
| |
|
||||||||||| ||||||||||||| |
|
|
| T |
4358070 |
aaaaaattggtcttgctaaaatgtt |
4358094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 21 - 245
Target Start/End: Original strand, 21633809 - 21634033
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
21633809 |
acatcatcacctcaattcaattctacaacaatattgaacacttatcaacttaaatgcacaggataaacagagattgaataaaatttcgtagataactgaa |
21633908 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||| |||||| |||||||||| |
|
|
| T |
21633909 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagataagctgtcgctaactaaacaaactatgataaccgatatttat |
21634008 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtt |
245 |
Q |
| |
|
||||||||||| || |||||||||| |
|
|
| T |
21634009 |
aaaaaattggtcttactaaaatgtt |
21634033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 208
Target Start/End: Original strand, 49827422 - 49827513
Alignment:
| Q |
117 |
tgaaatgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgata |
208 |
Q |
| |
|
|||||||||| ||| ||| | ||||| ||||||||| | || |||| |||||||||||| |||||| | ||||||||||||||||||||| |
|
|
| T |
49827422 |
tgaaatgcatgggagaagctgacattggctaaaattttagaaataactgaaatgcacgagataagttgccactaactaaactaactttgata |
49827513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 208
Target Start/End: Original strand, 54763875 - 54763944
Alignment:
| Q |
139 |
cattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgata |
208 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||| | |||||||| || |||||| ||||||||||| |
|
|
| T |
54763875 |
cattgacaaaaatttcaaaagtaactcaaatgcacggtataagttgtcactgactaaattaactttgata |
54763944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 208
Target Start/End: Original strand, 54764051 - 54764161
Alignment:
| Q |
98 |
ataaaatgtcgtagataactgaaatgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaac |
197 |
Q |
| |
|
||||||| ||||| ||| | |||||||| ||| || || ||||||||||||||||| || |||| ||||| || ||| |||||| | ||||||||| |
|
|
| T |
54764051 |
ataaaatttcgtaaatatataaaatgcatgggagaaaagggcattgactaaaatttcataattaactcaaatgtacaagataagttgacactaactaaat |
54764150 |
T |
|
| Q |
198 |
taactttgata |
208 |
Q |
| |
|
||||||||||| |
|
|
| T |
54764151 |
taactttgata |
54764161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 54764470 - 54764531
Alignment:
| Q |
147 |
aaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgata |
208 |
Q |
| |
|
||||||||||||||||| ||||||||| | |||||||| || |||||| ||||||||||| |
|
|
| T |
54764470 |
aaaatttcaaaagtaactcaaatgcacggtataagttgtcactgactaaattaactttgata |
54764531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 21 - 254
Target Start/End: Complemental strand, 46364621 - 46364388
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
46364621 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaactaaaatgctcaggataaacatagattgaataaaatttcgtagataactgaa |
46364522 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46364521 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
46364422 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtttcatctcac |
254 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
46364421 |
aaaaaattggttttgctaaaatgtttcatgtcac |
46364388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 21 - 245
Target Start/End: Complemental strand, 46365495 - 46365271
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
46365495 |
acatcatcatctcaattcaattctccaacgatattgaacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
46365396 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
46365395 |
atgcatcagataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagagaagttgtcgctaactaaactaactttgataaacaatatttag |
46365296 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtt |
245 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
46365295 |
aaaaaattggttttgctaaaatgtt |
46365271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 21 - 245
Target Start/End: Complemental strand, 46365059 - 46364835
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
46365059 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaacttaaatgcacaggataaacagagattgaataaaattttgtagataactgaa |
46364960 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
46364959 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagataagctgtcgctaactaaacaaaccatgataaacgatatttat |
46364860 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtt |
245 |
Q |
| |
|
||||||||||| ||||||||||||| |
|
|
| T |
46364859 |
aaaaaattggtcttgctaaaatgtt |
46364835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 218; Significance: 1e-120; HSPs: 18)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 21 - 254
Target Start/End: Original strand, 41778317 - 41778550
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
41778317 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaactaaaatgctcaggataaacagaggttgaataaaatttcgtagataactgaa |
41778416 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41778417 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
41778516 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtttcatctcac |
254 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
41778517 |
aaaaaattggttttgctaaaatgtttcatgtcac |
41778550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 21 - 254
Target Start/End: Original strand, 50988185 - 50988418
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
50988185 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaactaaaatgctcaagataaacagagattgaataaaatttcgtagataactgaa |
50988284 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
50988285 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
50988384 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtttcatctcac |
254 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
50988385 |
aaaaaattggttttgctaaaatgtttcatgtcac |
50988418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 21 - 254
Target Start/End: Original strand, 37398572 - 37398806
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
37398572 |
acatcatcacctcgattcaattctacaacgatattgaacacttatcaactaaaatgctcaggataaacagagattgaataaaatttcgtagataactgaa |
37398671 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37398672 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
37398771 |
T |
|
| Q |
221 |
-aaaaaattggttttgctaaaatgtttcatctcac |
254 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
37398772 |
aaaaaaattggttttgctaaaatgtttcatgtcac |
37398806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 21 - 254
Target Start/End: Complemental strand, 7715978 - 7715745
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
7715978 |
acatcatcacctcaattcaattctacaaagatattgaacacttatcaactaaaatgctcaggataaacagagattgaatacaatttcgtagataactgaa |
7715879 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7715878 |
atgaatcggataagtggtcattgactaaaatttcaaaagtagcataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
7715779 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtttcatctcac |
254 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
7715778 |
aaaaaattggttttgctaaaatgtttcatgtcac |
7715745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 21 - 245
Target Start/End: Complemental strand, 4292156 - 4291932
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
4292156 |
acatcatcacctcaattcaattctacaacgatattgaacacttataaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
4292057 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
4292056 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagagaagttgtcgctaactaaactaactttgataaacaatatttag |
4291957 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtt |
245 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
4291956 |
aaaaaattggttttgctaaaatgtt |
4291932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 21 - 254
Target Start/End: Original strand, 41777455 - 41777688
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
41777455 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaactaaaatgcacatgataaacagagattgaataaaatttcgtagaaaactgaa |
41777554 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
41777555 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgggacaagttgtcgttaactaaactaactttgataaccgatatttaa |
41777654 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtttcatctcac |
254 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||| |
|
|
| T |
41777655 |
aaaaaattggctttgctaaaatgtttcatgtcac |
41777688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 21 - 245
Target Start/End: Original strand, 33209126 - 33209350
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||| ||||||| ||||||| |
|
|
| T |
33209126 |
acatcatcacctcaattcaattctaaaacgatattgaacacttatcaactaaaatgcacaggataaacaaagattgaataaaatttcgtagaaaactgaa |
33209225 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
33209226 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagagaagttgtcgctaactaaactaactttgataaacaatatttag |
33209325 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtt |
245 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
33209326 |
aaaaaattggttttgctaaaatgtt |
33209350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 21 - 242
Target Start/End: Original strand, 37397699 - 37397920
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
37397699 |
acatcatcacctcaattcaattctacaacgatattgaacacttatctactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
37397798 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
37397799 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagagaaggtgtcgctaactaaactaactttgataaacaatatttag |
37397898 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaat |
242 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
37397899 |
aaaaaattggttttgctaaaat |
37397920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 21 - 245
Target Start/End: Original strand, 37398134 - 37398358
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| || |||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
37398134 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaacttaaatgcacaagataaacagagattgaattaaatttcgtagataactgaa |
37398233 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||| |||||| |||||||||| |
|
|
| T |
37398234 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagataagctgtcgctaactaaacaaactgtgataaccgatatttat |
37398333 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtt |
245 |
Q |
| |
|
||||||||||| ||||||||||||| |
|
|
| T |
37398334 |
aaaaaattggtcttgctaaaatgtt |
37398358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 21 - 245
Target Start/End: Original strand, 41777879 - 41778103
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
41777879 |
acatcatcacctcaattcaattctacaacaatattgaacacttatcaacttaaatgcacaggataaacagagattgaataaaatttcgtagataactgaa |
41777978 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||| |||||| |||||||||| |
|
|
| T |
41777979 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagataagctgtcgctaactaaacaaactatgataaccgatatttat |
41778078 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtt |
245 |
Q |
| |
|
||||||||||| || || ||||||| |
|
|
| T |
41778079 |
aaaaaattggtcttactgaaatgtt |
41778103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 21 - 254
Target Start/End: Complemental strand, 4291283 - 4291060
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
4291283 |
acatcatcacctcaattcaattctacaacgatattgaacacttattaactaaaatgctcaagataaacagagattgaataaaatttcgtagataactgaa |
4291184 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
4291183 |
atgcatcggataagtggtcatggactaaaatttcaaaagtaacataaatgcacgagaca----------aactaaacttactttgataaacgatatttat |
4291094 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtttcatctcac |
254 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
4291093 |
aaaaaattggttttgctaaaatgtttcatgtcac |
4291060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 21 - 245
Target Start/End: Complemental strand, 4291721 - 4291497
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | ||||||||||| |||||| ||| ||||||| | |||||||||||| ||||||||||||||| |
|
|
| T |
4291721 |
acatcatcacctcaattcaattctacaacgatattgcacacttatcaacttaaatgcacagaataaacatatattgaataaaatttcgtagataactgaa |
4291622 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||| |||||| |||||||||| |
|
|
| T |
4291621 |
atgcatcggataagtggtcattgagtaaaatttcaaaagtaacataaatggacgagataagttgtcgctaactaaacaaactatgataatcgatatttat |
4291522 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtt |
245 |
Q |
| |
|
||||||||||| ||||||||||||| |
|
|
| T |
4291521 |
aaaaaattggtcttgctaaaatgtt |
4291497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 21 - 245
Target Start/End: Original strand, 50987747 - 50987971
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | ||||||||||| |||||| || ||||||||||||||||||||||| ||||| |||||| || |
|
|
| T |
50987747 |
acatcatcacctcaattcaattctacaacgatattgtacacttatcaacttaaatgcacaagataaacagagattgaataaaatttcgtaaataacttaa |
50987846 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||| |||||||||| |
|
|
| T |
50987847 |
atgtatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagataagttgtcgctaactaaacaaactatgataaccgatatttat |
50987946 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtt |
245 |
Q |
| |
|
||||||||||| |||||||||||| |
|
|
| T |
50987947 |
aaaaaattggtcatgctaaaatgtt |
50987971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 172
Target Start/End: Original strand, 22521005 - 22521152
Alignment:
| Q |
25 |
catcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaaatgc |
124 |
Q |
| |
|
||||||||||||| |||| ||||| || || ||| |||||||||| ||||| | | || || || |||||||||||| | |||||||| |||||||| |
|
|
| T |
22521005 |
catcacctcaatttaattttacaatgaaatcgaacacttatcaacaaaaatacacgagacaagtaggcattgaataaaattttgtagataattgaaatgc |
22521104 |
T |
|
| Q |
125 |
atcggataagtggtcattgactaaaatttcaaaagtaacataaatgca |
172 |
Q |
| |
|
|| ||| |||||| ||||||||||||| |||||||||| |||||||| |
|
|
| T |
22521105 |
attggaaaagtgggcattgactaaaatagcaaaagtaacgtaaatgca |
22521152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 164
Target Start/End: Original strand, 22521452 - 22521590
Alignment:
| Q |
26 |
atcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaaatgca |
125 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| ||||| ||||| | | |||||| || |||||||| ||| |||||||||||||||||||| |
|
|
| T |
22521452 |
atcacctcaattcaattctacaatgatattgaacacttagtttaaaaaatacacgggataagtggacattgaatacaatttcgtagataactgaaatgca |
22521551 |
T |
|
| Q |
126 |
tcggataagtggtcattgactaaaatttcaaaagtaaca |
164 |
Q |
| |
|
| | | || ||| |||| |||||||||| |||||||||| |
|
|
| T |
22521552 |
tggtaaaaatgggcattcactaaaattttaaaagtaaca |
22521590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 22520500 - 22520551
Alignment:
| Q |
26 |
atcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgc |
77 |
Q |
| |
|
|||||||||||||||||||| || |||||| ||||||||||||||||||||| |
|
|
| T |
22520500 |
atcacctcaattcaattctaaaatgatattcaatacttatcaactaaaatgc |
22520551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 170
Target Start/End: Original strand, 22522000 - 22522132
Alignment:
| Q |
36 |
ttcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaaatgcatcggataagt |
135 |
Q |
| |
|
||||||||||||| | ||||||| ||||||||||||||||| | |||| ||| ||||||||||| | ||||||| | ||||||| ||| |||| |
|
|
| T |
22522000 |
ttcaattctacaatgttattgaacacttatcaactaaaatgtacgacataagtagacattgaataaaa--ttgtagatagattaaatgcacgggagaagt |
22522097 |
T |
|
| Q |
136 |
ggtcattgactaaaatttcaaaagtaacataaatg |
170 |
Q |
| |
|
| |||||||||||||||| |||||||| |||||| |
|
|
| T |
22522098 |
aggcattgactaaaatttctaaagtaacgtaaatg |
22522132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 186
Target Start/End: Original strand, 20201212 - 20201371
Alignment:
| Q |
26 |
atcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaaatgca |
125 |
Q |
| |
|
|||||||| |||||||| |||| || |||||| || |||||||||||||| | | ||||| || |||| |||||| | ||| |||||| ||||||| |
|
|
| T |
20201212 |
atcacctcgcttcaattcgacaatgacattgaactctcatcaactaaaatgcacggaataaatggacattgtctaaaattttgtaaataactaaaatgca |
20201311 |
T |
|
| Q |
126 |
tcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtc |
186 |
Q |
| |
|
| ||| || ||| |||||| |||| |||||||||||| ||||||| | || |||||||| |
|
|
| T |
20201312 |
tgggagaaatggacattga-gaaaaattcaaaagtaactcaaatgcatgggataagttgtc |
20201371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 21 - 254
Target Start/End: Complemental strand, 36032180 - 36031947
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||| |
|
|
| T |
36032180 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaactaaaatgctcaagataaacagagattgaataaaatttcatagataactgaa |
36032081 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36032080 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
36031981 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtttcatctcac |
254 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
36031980 |
aaaaaattggttttgctaaaatgtttcatgtcac |
36031947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 21 - 249
Target Start/End: Original strand, 18122204 - 18122432
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
18122204 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaactaaaatgctcaggttaaacagagattgaataaaatttcgtagataactgaa |
18122303 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18122304 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
18122403 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtttcat |
249 |
Q |
| |
|
|||| |||||||||||||||||||||||| |
|
|
| T |
18122404 |
aaaatattggttttgctaaaatgtttcat |
18122432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 21 - 237
Target Start/End: Original strand, 37087087 - 37087303
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
37087087 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaactaaaatgctcgggataaacagagattgaataaaatttcgtagataactgaa |
37087186 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37087187 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagataagttgtcgctaactaaactaactttgataaacgatatttat |
37087286 |
T |
|
| Q |
221 |
aaaaaattggttttgct |
237 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
37087287 |
aaaaaattggttttgct |
37087303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 21 - 245
Target Start/End: Original strand, 37086214 - 37086438
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||| |||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
37086214 |
acatcatcacctcaattccattctacagcgatattgaacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
37086313 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
37086314 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagagaagttgtcgctaactaaactaactttgataaacaatatttag |
37086413 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtt |
245 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
37086414 |
aaaaaattggttttgctaaaatgtt |
37086438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 21 - 245
Target Start/End: Complemental strand, 36033052 - 36032828
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||| ||| ||| ||||||| |
|
|
| T |
36033052 |
acatcatcacctcaattcaattctacaacgatattgaacactgatcaactaaaatgcacaggataaacagagattgaataaaatttcgcagaaaactgaa |
36032953 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
36032952 |
atgcatcggataagtggtcattaactaaaatttcaaaagtaacataaatgcacgagagaagttgtcgctaactaaactaactttgataaacaatatttag |
36032853 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtt |
245 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
36032852 |
aaaaaattggttttgctaaaatgtt |
36032828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 21 - 245
Target Start/End: Original strand, 37086649 - 37086873
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
37086649 |
acatcatcacctcaattcaattctacaacgataatgaacacttatcaacttaaatgcacaggataaacagagattgaataaaatttcgtagataactgaa |
37086748 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||| |||||| |||||||||| |
|
|
| T |
37086749 |
atgcattggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagataagctgtcgctaactaaacaaactatgataaccgatatttat |
37086848 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtt |
245 |
Q |
| |
|
||||||||||| ||||||||||||| |
|
|
| T |
37086849 |
aaaaaattggtcttgctaaaatgtt |
37086873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 21 - 245
Target Start/End: Complemental strand, 36032618 - 36032394
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||| ||||||||||| ||||||||||||||||| | ||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
36032618 |
acatcaccacctcaattcgattctacaacgatattgcacacttatcaacttaaatgcacaggataaacagagattgaataaaatttcgtagataactgaa |
36032519 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||| |||||| |||||||||| |
|
|
| T |
36032518 |
atgcatcagataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagataagctgtcgctaactaaacaaactatgataaccgatatttat |
36032419 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtt |
245 |
Q |
| |
|
||||||||||| ||||||||||||| |
|
|
| T |
36032418 |
aaaaaattggtcttgctaaaatgtt |
36032394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 54961006 - 54961073
Alignment:
| Q |
139 |
cattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgat |
207 |
Q |
| |
|
||||||||||||||||| ||||||| |||||||||||| |||||||| || || |||||||||||||| |
|
|
| T |
54961006 |
cattgactaaaatttcagaagtaactcaaatgcacgagataagttgtcactgac-aaactaactttgat |
54961073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 37087310 - 37087370
Alignment:
| Q |
27 |
tcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaa |
87 |
Q |
| |
|
|||||||| |||||||||| || ||||||||| ||||| ||||||||||| | ||||||| |
|
|
| T |
37087310 |
tcacctcacttcaattctataatgatattgaacccttataaactaaaatgcacgggataaa |
37087370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 206; Significance: 1e-112; HSPs: 8)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 21 - 254
Target Start/End: Complemental strand, 20400486 - 20400253
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
20400486 |
acatcatcacctcaattcaattctacaatgatattgaacacttatcaacttaaatgcacatgataaacagagattgaataaaatttcgtagataactgaa |
20400387 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20400386 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
20400287 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtttcatctcac |
254 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
20400286 |
aaaaaattggttttgctaaaatgtttcatgtcac |
20400253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 21 - 254
Target Start/End: Original strand, 34997621 - 34997854
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |
|
|
| T |
34997621 |
acatcatcacctcaattcaattctacaacgatattggacacttatcaactaaaatgctcaggataaacagagattgaataaaatttcgttaataactgaa |
34997720 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34997721 |
atggatcggataagtggtcattgattaaaatttcaaaagtaacataaatgcacgagataagttgtcgctaactaaactaactttgataaacgatatttat |
34997820 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtttcatctcac |
254 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
34997821 |
aaaaaattggttttgctaaaatgtttcatgtcac |
34997854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 21 - 245
Target Start/End: Original strand, 34996748 - 34996972
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
34996748 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaactagaatgcacaggataaacagagattgaataaaatttcgtagaaaactgaa |
34996847 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
34996848 |
atgcatcggataagtggtcattggctaaaatttcaaaagtaacataaatgcacgagagaagttgtcgctaactaaactaactttgataaacaatatttag |
34996947 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtt |
245 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
34996948 |
aaaaaattggttttgctaaaatgtt |
34996972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 21 - 254
Target Start/End: Original strand, 17842958 - 17843191
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||||| || ||||||||||| |||||| |||||||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
17842958 |
acatcatcacctcaattcaattttacaatgatattaaacacttatcaacttaaatgcacaggataaacagagattgaatacaatttcgtagataactgaa |
17843057 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
|| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17843058 |
atacatcggataagtggtcattaactaaaatttcaaaagtaaaataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
17843157 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtttcatctcac |
254 |
Q |
| |
|
||||||||| ||||||||||||||||||| |||| |
|
|
| T |
17843158 |
aaaaaattgattttgctaaaatgtttcatgtcac |
17843191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 21 - 245
Target Start/End: Original strand, 34997182 - 34997406
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
34997182 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaacttaaatgcacaggataaacagagattaaataaaatttcgtagataactgaa |
34997281 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||| |||||| |||||||||| |
|
|
| T |
34997282 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagataagctgtcgctaactaaacaaactatgataaccgatatttat |
34997381 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaatgtt |
245 |
Q |
| |
|
||||||||||| |||||||||||| |
|
|
| T |
34997382 |
aaaaaattggtcatgctaaaatgtt |
34997406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 21 - 241
Target Start/End: Complemental strand, 20400922 - 20400701
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||| |||||||||||||||| ||||||| ||||||| |
|
|
| T |
20400922 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaactaaaatacacaggataaatagagattgaataaaatttcgtagaaaactgaa |
20400823 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaac-taactttgataaacgatattta |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||| ||||||| |
|
|
| T |
20400822 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagagaagttgtcgctgactaaacttaactttgataaacaatattta |
20400723 |
T |
|
| Q |
220 |
taaaaaattggttttgctaaaa |
241 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
20400722 |
gaaaaaattggttttgctaaaa |
20400701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 27433819 - 27433887
Alignment:
| Q |
140 |
attgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgata |
208 |
Q |
| |
|
|||||| ||||||||||||||||| ||||| ||| || |||||||| ||||||||||||||||||||| |
|
|
| T |
27433819 |
attgacaaaaatttcaaaagtaactcaaatggacgggataagttgtcactaactaaactaactttgata |
27433887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 208
Target Start/End: Original strand, 27433301 - 27433370
Alignment:
| Q |
139 |
cattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgata |
208 |
Q |
| |
|
|||||||||| |||||| ||||||| ||||||||| || ||||| || ||||||||| ||||||||||| |
|
|
| T |
27433301 |
cattgactaagatttcagaagtaactcaaatgcacgggataagttatcactaactaaattaactttgata |
27433370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0517 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: scaffold0517
Description:
Target: scaffold0517; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 21 - 242
Target Start/End: Complemental strand, 9514 - 9293
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
9514 |
acatcatcacctcaattcaattctacaacgatattgaacacttatcaactaaaatgctcaggataaacagagattgaataaaatttcgtagataactgaa |
9415 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttat |
220 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
9414 |
atgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagataagctgtcgctaactaaactaactttgataatcgatatttat |
9315 |
T |
|
| Q |
221 |
aaaaaattggttttgctaaaat |
242 |
Q |
| |
|
||||||||||| |||||||||| |
|
|
| T |
9314 |
aaaaaattggtcttgctaaaat |
9293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 21 - 161
Target Start/End: Complemental strand, 29589083 - 29588943
Alignment:
| Q |
21 |
acatcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaa |
120 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
29589083 |
acatcatcacctcaattcaattctacaacaatattgaacacttatcaactaaaatgcacaggataaacagagattgaataaaatttcgtagataactgaa |
29588984 |
T |
|
| Q |
121 |
atgcatcggataagtggtcattgactaaaatttcaaaagta |
161 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29588983 |
atgcatcggataagtggtcattgactaaaatttcaaaagta |
29588943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 208
Target Start/End: Original strand, 1076825 - 1076894
Alignment:
| Q |
139 |
cattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgata |
208 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||| | |||||||| || |||||| ||||||||||| |
|
|
| T |
1076825 |
cattgacaaaaatttcaaaagtaactcaaatgcacggtataagttgtcactgactaaattaactttgata |
1076894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 130 - 254
Target Start/End: Complemental strand, 44841104 - 44840980
Alignment:
| Q |
130 |
ataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacgatatttataaaaaattg |
229 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44841104 |
ataagtggtcattgactaaaatttcaaaagtaacataaatgaacgaaacaagttgtcgctaactaaactaactttgataaacgatatttataaaaaattg |
44841005 |
T |
|
| Q |
230 |
gttttgctaaaatgtttcatctcac |
254 |
Q |
| |
|
||||||||||||||||||| |||| |
|
|
| T |
44841004 |
attttgctaaaatgtttcatatcac |
44840980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 62; Significance: 8e-27; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 18754613 - 18754465
Alignment:
| Q |
23 |
atcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaaat |
122 |
Q |
| |
|
|||||||| ||||||||||||||||| | |||||||||||||||||||||||||| | |||||| || | |||| ||||| ||||| ||||||||||| |
|
|
| T |
18754613 |
atcatcacttcaattcaattctacaatgttattgaatacttatcaactaaaatgcactagataaatggacaatgaacaaaatttcgtatataactgaaat |
18754514 |
T |
|
| Q |
123 |
gcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgca |
172 |
Q |
| |
|
|| | | || ||| ||||||||||||||||||||||||| |||||||| |
|
|
| T |
18754513 |
gcgt-gctgaactgggcattgactaaaatttcaaaagtaacgtaaatgca |
18754465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 196
Target Start/End: Complemental strand, 18754194 - 18754020
Alignment:
| Q |
23 |
atcatcacctcaattcaattctacaacgatattgaatacttatcaactaaaatgctcaggataaacagagattgaataaaatgtcgtagataactgaaat |
122 |
Q |
| |
|
||||||||||||||| ||| | ||| ||||||||| ||||||||| | |||||| | || || | | |||||||||||| |||||||||||||||| |
|
|
| T |
18754194 |
atcatcacctcaatttaatgcatcaatgatattgaacacttatcaatttaaatgcacgagacaagtacatattgaataaaattacgtagataactgaaat |
18754095 |
T |
|
| Q |
123 |
gcatcggataagtggtcattgactaaa-atttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaa |
196 |
Q |
| |
|
||||| || || ||||||||||||||| ||| ||||||||| ||||||||||||| || |||||| | |||||| |
|
|
| T |
18754094 |
gcatctgaaaaatggtcattgactaaactttttaaaagtaacgtaaatgcacgagataatttgtcgttgactaaa |
18754020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 113 - 213
Target Start/End: Original strand, 5323839 - 5323939
Alignment:
| Q |
113 |
taactgaaatgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgataaacg |
212 |
Q |
| |
|
||||| |||||||| ||| |||||| ||||||| |||| |||||||||||| |||||||||| | |||||||| ||||||||||||||||||| ||| |
|
|
| T |
5323839 |
taactaaaatgcatgggagaagtgggcattgacaaaaaattcaaaagtaactcaaatgcacgaaataagttgtcatcaactaaactaactttgatacacg |
5323938 |
T |
|
| Q |
213 |
a |
213 |
Q |
| |
|
| |
|
|
| T |
5323939 |
a |
5323939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 5323053 - 5323142
Alignment:
| Q |
119 |
aaatgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaactaaactaactttgata |
208 |
Q |
| |
|
|||||||| ||| ||| || |||||||||||| ||||||| |||| |||||||||| || |||| ||| |||||||| ||||||||||| |
|
|
| T |
5323053 |
aaatgcatgggagaagcgggcattgactaaaagttcaaaattaacttaaatgcacgggataagtagtcaataactaaattaactttgata |
5323142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0206 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0206
Description:
Target: scaffold0206; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 208
Target Start/End: Complemental strand, 10659 - 10543
Alignment:
| Q |
92 |
gattgaataaaatgtcgtagataactgaaatgcatcggataagtggtcattgactaaaatttcaaaagtaacataaatgcacgagacaagttgtcgctaa |
191 |
Q |
| |
|
||||| ||||||| ||||| |||| | |||||||| | | ||| | ||||||| ||||||||||||||||| ||||| || ||| |||||| | | | |
|
|
| T |
10659 |
gattgtataaaatatcgtaaataaataaaatgcatagaagaagcgaacattgacaaaaatttcaaaagtaactcaaatgtacaagataagttgacattga |
10560 |
T |
|
| Q |
192 |
ctaaactaactttgata |
208 |
Q |
| |
|
||||| ||||||||||| |
|
|
| T |
10559 |
ctaaattaactttgata |
10543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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