View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0730_low_29 (Length: 250)

Name: NF0730_low_29
Description: NF0730
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0730_low_29
NF0730_low_29
[»] chr7 (39 HSPs)
chr7 (14-249)||(11054316-11054551)
chr7 (21-246)||(19486179-19486403)
chr7 (14-144)||(37784671-37784802)
chr7 (14-249)||(13256297-13256531)
chr7 (14-249)||(48274087-48274321)
chr7 (14-239)||(17467607-17467830)
chr7 (14-239)||(17585384-17585607)
chr7 (168-245)||(13698856-13698933)
chr7 (22-147)||(26070944-26071070)
chr7 (22-147)||(26094731-26094857)
chr7 (19-147)||(2028359-2028488)
chr7 (14-241)||(3288980-3289205)
chr7 (22-147)||(111955-112081)
chr7 (168-249)||(33001920-33001999)
chr7 (22-134)||(3894477-3894589)
chr7 (14-134)||(25123890-25124010)
chr7 (14-134)||(42056992-42057112)
chr7 (38-149)||(370704-370815)
chr7 (42-249)||(40554727-40554932)
chr7 (14-134)||(2190878-2190998)
chr7 (14-147)||(3049019-3049154)
chr7 (165-244)||(10063120-10063199)
chr7 (38-149)||(13757987-13758098)
chr7 (38-149)||(14251426-14251537)
chr7 (14-239)||(37380485-37380708)
chr7 (168-249)||(8756359-8756440)
chr7 (14-249)||(21734630-21734866)
chr7 (169-249)||(29004831-29004909)
chr7 (38-149)||(18980548-18980659)
chr7 (40-149)||(15927186-15927296)
chr7 (186-242)||(8249465-8249520)
chr7 (23-135)||(10063204-10063316)
chr7 (165-249)||(13898230-13898313)
chr7 (14-134)||(15525268-15525388)
chr7 (42-149)||(28720332-28720439)
chr7 (14-134)||(4280729-4280849)
chr7 (174-246)||(48744297-48744369)
chr7 (50-249)||(21734071-21734270)
chr7 (19-119)||(13866472-13866573)
[»] chr1 (19 HSPs)
chr1 (14-249)||(51476596-51476831)
chr1 (14-248)||(52983831-52984064)
chr1 (21-242)||(21473404-21473623)
chr1 (21-242)||(18824232-18824451)
chr1 (14-249)||(18270929-18271163)
chr1 (14-249)||(18275583-18275817)
chr1 (42-249)||(51324137-51324343)
chr1 (14-249)||(13527924-13528157)
chr1 (40-245)||(7320812-7321014)
chr1 (42-249)||(21239258-21239464)
chr1 (22-147)||(27330432-27330558)
chr1 (14-239)||(20058088-20058312)
chr1 (168-250)||(20030853-20030934)
chr1 (22-147)||(35054221-35054347)
chr1 (168-249)||(7791770-7791850)
chr1 (14-134)||(20825453-20825573)
chr1 (38-149)||(17148185-17148296)
chr1 (168-221)||(21660130-21660183)
chr1 (42-149)||(39060977-39061084)
[»] chr8 (28 HSPs)
chr8 (14-249)||(22583869-22584102)
chr8 (14-249)||(23889410-23889642)
chr8 (21-249)||(3273499-3273728)
chr8 (21-236)||(34302161-34302376)
chr8 (24-242)||(23451086-23451305)
chr8 (14-249)||(26220156-26220390)
chr8 (44-242)||(24496237-24496436)
chr8 (14-242)||(17611507-17611734)
chr8 (168-249)||(22532345-22532426)
chr8 (168-249)||(22537030-22537111)
chr8 (73-246)||(24979780-24979951)
chr8 (168-249)||(39694491-39694572)
chr8 (19-124)||(5080825-5080930)
chr8 (20-147)||(273879-274007)
chr8 (20-147)||(641842-641970)
chr8 (38-149)||(13721456-13721567)
chr8 (168-246)||(44522393-44522470)
chr8 (20-147)||(827648-827776)
chr8 (38-149)||(16873579-16873690)
chr8 (19-152)||(26222590-26222724)
chr8 (168-249)||(32950661-32950742)
chr8 (14-134)||(16039583-16039703)
chr8 (35-147)||(20481057-20481170)
chr8 (49-149)||(3431810-3431910)
chr8 (20-124)||(24386456-24386560)
chr8 (42-149)||(17501807-17501914)
chr8 (14-134)||(30766234-30766354)
chr8 (168-241)||(39364532-39364605)
[»] chr3 (56 HSPs)
chr3 (14-249)||(45530816-45531052)
chr3 (21-249)||(37641708-37641935)
chr3 (25-249)||(14818700-14818923)
chr3 (21-249)||(29172064-29172289)
chr3 (14-152)||(8604442-8604581)
chr3 (21-242)||(13511677-13511899)
chr3 (21-242)||(24340163-24340382)
chr3 (21-249)||(22146971-22147197)
chr3 (14-249)||(36167135-36167369)
chr3 (14-249)||(12536256-12536491)
chr3 (14-249)||(34851512-34851745)
chr3 (21-242)||(12158894-12159117)
chr3 (21-242)||(52338171-52338390)
chr3 (14-249)||(10550908-10551142)
chr3 (82-249)||(9511130-9511296)
chr3 (82-249)||(9519105-9519271)
chr3 (72-242)||(52212648-52212817)
chr3 (14-142)||(11061694-11061823)
chr3 (14-249)||(21618986-21619220)
chr3 (14-249)||(17547681-17547914)
chr3 (14-152)||(17100085-17100224)
chr3 (170-245)||(37038808-37038883)
chr3 (19-152)||(11882726-11882860)
chr3 (35-239)||(20188353-20188554)
chr3 (14-230)||(15517258-15517473)
chr3 (168-249)||(19568421-19568503)
chr3 (19-124)||(13327077-13327182)
chr3 (169-245)||(42324189-42324265)
chr3 (14-115)||(20417764-20417864)
chr3 (14-238)||(11849818-11850039)
chr3 (39-146)||(2843651-2843758)
chr3 (83-239)||(13667306-13667460)
chr3 (14-134)||(51961663-51961783)
chr3 (14-134)||(53770473-53770593)
chr3 (38-149)||(18910610-18910721)
chr3 (14-147)||(23491806-23491941)
chr3 (22-152)||(54423453-54423584)
chr3 (168-249)||(17513588-17513668)
chr3 (14-152)||(23395320-23395460)
chr3 (14-147)||(38167343-38167478)
chr3 (14-134)||(16260894-16261014)
chr3 (168-249)||(3393964-3394045)
chr3 (168-221)||(178720-178773)
chr3 (28-147)||(3991999-3992119)
chr3 (168-221)||(18366752-18366805)
chr3 (14-134)||(13968123-13968243)
chr3 (14-134)||(13973598-13973718)
chr3 (168-223)||(12276556-12276611)
chr3 (42-149)||(40039425-40039532)
chr3 (42-149)||(50351132-50351239)
chr3 (168-237)||(13029384-13029452)
chr3 (108-149)||(17758759-17758800)
chr3 (108-149)||(19060079-19060120)
chr3 (50-149)||(16934513-16934612)
chr3 (168-237)||(13025792-13025860)
chr3 (14-46)||(52212811-52212843)
[»] scaffold2046 (1 HSPs)
scaffold2046 (19-249)||(801-1028)
[»] chr6 (36 HSPs)
chr6 (19-249)||(13750488-13750715)
chr6 (21-249)||(18259386-18259612)
chr6 (21-249)||(8226943-8227169)
chr6 (57-249)||(28948221-28948412)
chr6 (19-236)||(24267455-24267671)
chr6 (14-249)||(5109924-5110158)
chr6 (21-249)||(23532099-23532325)
chr6 (14-249)||(16447986-16448220)
chr6 (55-242)||(24441306-24441491)
chr6 (19-249)||(29415766-29415997)
chr6 (19-152)||(25650672-25650806)
chr6 (100-232)||(31468006-31468137)
chr6 (35-147)||(18776609-18776722)
chr6 (14-239)||(5289298-5289517)
chr6 (14-134)||(18003196-18003316)
chr6 (168-244)||(20177753-20177829)
chr6 (168-244)||(22158162-22158238)
chr6 (14-134)||(23994355-23994475)
chr6 (38-149)||(16231509-16231620)
chr6 (170-245)||(25753198-25753273)
chr6 (170-245)||(25755368-25755443)
chr6 (38-149)||(18087350-18087461)
chr6 (170-244)||(19102699-19102773)
chr6 (14-134)||(13621336-13621456)
chr6 (38-149)||(23977386-23977497)
chr6 (168-249)||(16132635-16132716)
chr6 (170-249)||(18659196-18659275)
chr6 (42-232)||(19174803-19174991)
chr6 (168-249)||(29847488-29847569)
chr6 (22-134)||(15735455-15735567)
chr6 (168-249)||(19443246-19443326)
chr6 (14-134)||(24563048-24563168)
chr6 (170-232)||(16136053-16136115)
chr6 (168-241)||(25348115-25348188)
chr6 (35-147)||(26089191-26089304)
chr6 (115-147)||(16135999-16136031)
[»] scaffold0037 (4 HSPs)
scaffold0037 (14-249)||(113181-113415)
scaffold0037 (14-249)||(118015-118249)
scaffold0037 (23-119)||(25409-25505)
scaffold0037 (14-147)||(94407-94542)
[»] chr2 (25 HSPs)
chr2 (19-249)||(19358496-19358728)
chr2 (14-146)||(19659480-19659613)
chr2 (19-249)||(6477446-6477674)
chr2 (14-249)||(22703580-22703815)
chr2 (35-232)||(24087798-24087993)
chr2 (168-249)||(43707254-43707335)
chr2 (14-142)||(23822247-23822376)
chr2 (14-142)||(23831326-23831455)
chr2 (22-152)||(36891359-36891490)
chr2 (28-149)||(42178489-42178610)
chr2 (38-149)||(12642170-12642281)
chr2 (35-232)||(45617836-45618032)
chr2 (41-149)||(12636396-12636504)
chr2 (14-134)||(21274750-21274870)
chr2 (38-149)||(3799131-3799242)
chr2 (22-152)||(9653568-9653699)
chr2 (42-145)||(16935056-16935159)
chr2 (42-145)||(17005716-17005819)
chr2 (168-249)||(21245442-21245523)
chr2 (168-249)||(24273244-24273325)
chr2 (42-149)||(34877461-34877569)
chr2 (41-149)||(8943466-8943574)
chr2 (14-134)||(27366874-27366994)
chr2 (168-249)||(26904164-26904243)
chr2 (171-231)||(24383415-24383475)
[»] scaffold0017 (3 HSPs)
scaffold0017 (21-250)||(722-952)
scaffold0017 (21-134)||(7589-7702)
scaffold0017 (42-149)||(26374-26480)
[»] scaffold0117 (2 HSPs)
scaffold0117 (21-249)||(40423-40650)
scaffold0117 (72-249)||(25797-25973)
[»] scaffold0453 (1 HSPs)
scaffold0453 (14-237)||(3721-3943)
[»] scaffold0377 (1 HSPs)
scaffold0377 (21-242)||(16319-16540)
[»] chr5 (20 HSPs)
chr5 (14-242)||(8952257-8952483)
chr5 (21-249)||(40726303-40726529)
chr5 (14-249)||(18318416-18318650)
chr5 (19-249)||(22777279-22777508)
chr5 (20-152)||(21109334-21109467)
chr5 (35-232)||(21297585-21297781)
chr5 (35-230)||(21311130-21311324)
chr5 (171-241)||(21405850-21405920)
chr5 (14-146)||(22111577-22111710)
chr5 (14-249)||(22357113-22357346)
chr5 (22-147)||(20711518-20711644)
chr5 (14-241)||(20765474-20765699)
chr5 (14-124)||(21204360-21204470)
chr5 (73-249)||(23539431-23539604)
chr5 (41-149)||(9730912-9731020)
chr5 (20-134)||(21650138-21650252)
chr5 (14-249)||(10817415-10817650)
chr5 (20-147)||(22007197-22007325)
chr5 (168-248)||(22470588-22470667)
chr5 (81-149)||(20197648-20197716)
[»] scaffold0331 (1 HSPs)
scaffold0331 (21-249)||(4319-4542)
[»] scaffold0720 (1 HSPs)
scaffold0720 (21-241)||(662-880)
[»] scaffold0181 (1 HSPs)
scaffold0181 (14-249)||(25730-25964)
[»] chr4 (37 HSPs)
chr4 (21-237)||(15373944-15374158)
chr4 (21-249)||(22354291-22354517)
chr4 (14-249)||(14280854-14281088)
chr4 (21-242)||(16223992-16224211)
chr4 (58-249)||(6512273-6512462)
chr4 (14-152)||(52266205-52266343)
chr4 (21-242)||(20898966-20899185)
chr4 (23-242)||(15368146-15368362)
chr4 (14-244)||(54798123-54798352)
chr4 (14-249)||(4830371-4830604)
chr4 (14-249)||(4833666-4833899)
chr4 (19-147)||(26921778-26921907)
chr4 (35-245)||(18230367-18230575)
chr4 (168-245)||(9870663-9870740)
chr4 (22-142)||(30233202-30233323)
chr4 (14-223)||(14931362-14931569)
chr4 (14-249)||(2584358-2584591)
chr4 (168-249)||(3338129-3338210)
chr4 (82-242)||(15371712-15371871)
chr4 (14-152)||(15852039-15852178)
chr4 (21-249)||(27028362-27028584)
chr4 (14-249)||(13447135-13447368)
chr4 (19-151)||(4615359-4615492)
chr4 (38-149)||(7132593-7132704)
chr4 (38-149)||(20000340-20000451)
chr4 (42-146)||(5683060-5683164)
chr4 (23-152)||(15403159-15403287)
chr4 (23-147)||(16157410-16157535)
chr4 (14-78)||(15273059-15273123)
chr4 (49-149)||(54363791-54363891)
chr4 (42-149)||(15214119-15214226)
chr4 (168-242)||(15991026-15991099)
chr4 (14-79)||(8574316-8574381)
chr4 (21-68)||(15371663-15371710)
chr4 (51-149)||(45314400-45314498)
chr4 (168-249)||(10705491-10705572)
chr4 (168-249)||(10919261-10919342)
[»] scaffold0149 (1 HSPs)
scaffold0149 (21-242)||(35760-35979)
[»] scaffold0047 (1 HSPs)
scaffold0047 (14-152)||(76793-76932)
[»] scaffold0004 (4 HSPs)
scaffold0004 (14-249)||(75395-75630)
scaffold0004 (14-249)||(60032-60266)
scaffold0004 (19-249)||(72550-72782)
scaffold0004 (22-88)||(187612-187678)
[»] scaffold0175 (2 HSPs)
scaffold0175 (24-241)||(18463-18678)
scaffold0175 (20-98)||(14392-14470)
[»] scaffold0429 (1 HSPs)
scaffold0429 (14-249)||(2209-2443)
[»] scaffold0083 (4 HSPs)
scaffold0083 (168-249)||(10967-11048)
scaffold0083 (168-249)||(5249-5330)
scaffold0083 (42-146)||(47-151)
scaffold0083 (42-146)||(5351-5455)
[»] scaffold0008 (1 HSPs)
scaffold0008 (14-249)||(72262-72496)
[»] scaffold0107 (1 HSPs)
scaffold0107 (21-242)||(3505-3724)
[»] scaffold0021 (2 HSPs)
scaffold0021 (14-249)||(147228-147461)
scaffold0021 (22-146)||(87737-87862)
[»] scaffold1276 (1 HSPs)
scaffold1276 (72-249)||(804-978)
[»] scaffold0371 (1 HSPs)
scaffold0371 (21-242)||(3489-3711)
[»] scaffold0273 (1 HSPs)
scaffold0273 (35-249)||(7305-7518)
[»] scaffold0123 (2 HSPs)
scaffold0123 (42-245)||(6908-7110)
scaffold0123 (14-249)||(1480-1712)
[»] scaffold0247 (1 HSPs)
scaffold0247 (21-242)||(17468-17686)
[»] scaffold0256 (1 HSPs)
scaffold0256 (168-246)||(2060-2138)
[»] scaffold0825 (1 HSPs)
scaffold0825 (168-245)||(602-679)
[»] scaffold0174 (3 HSPs)
scaffold0174 (108-249)||(19405-19545)
scaffold0174 (175-249)||(11154-11228)
scaffold0174 (175-249)||(5034-5108)
[»] scaffold0261 (1 HSPs)
scaffold0261 (19-147)||(6690-6819)
[»] scaffold0113 (1 HSPs)
scaffold0113 (165-246)||(35245-35326)
[»] scaffold0962 (1 HSPs)
scaffold0962 (35-249)||(825-1038)
[»] scaffold0106 (1 HSPs)
scaffold0106 (168-249)||(21741-21822)
[»] scaffold0022 (1 HSPs)
scaffold0022 (14-249)||(117033-117266)
[»] scaffold0597 (1 HSPs)
scaffold0597 (28-147)||(1666-1786)
[»] scaffold0251 (2 HSPs)
scaffold0251 (14-134)||(14089-14209)
scaffold0251 (38-78)||(22106-22146)
[»] scaffold0244 (1 HSPs)
scaffold0244 (35-147)||(23192-23305)
[»] scaffold0080 (2 HSPs)
scaffold0080 (168-249)||(29741-29821)
scaffold0080 (168-249)||(35206-35286)
[»] scaffold0025 (1 HSPs)
scaffold0025 (14-147)||(146031-146166)
[»] scaffold0309 (2 HSPs)
scaffold0309 (14-249)||(8744-8976)
scaffold0309 (14-89)||(6592-6667)
[»] scaffold0465 (1 HSPs)
scaffold0465 (27-147)||(10652-10773)
[»] scaffold0574 (1 HSPs)
scaffold0574 (22-134)||(10209-10321)
[»] scaffold0126 (1 HSPs)
scaffold0126 (42-223)||(6682-6860)
[»] scaffold0447 (4 HSPs)
scaffold0447 (35-147)||(4021-4134)
scaffold0447 (35-147)||(8635-8748)
scaffold0447 (168-223)||(7610-7665)
scaffold0447 (168-223)||(12224-12279)
[»] scaffold0383 (2 HSPs)
scaffold0383 (35-147)||(6629-6742)
scaffold0383 (168-223)||(10219-10274)
[»] scaffold0032 (1 HSPs)
scaffold0032 (35-147)||(55035-55148)
[»] scaffold0490 (1 HSPs)
scaffold0490 (14-249)||(5489-5720)
[»] scaffold0303 (1 HSPs)
scaffold0303 (14-147)||(687-822)
[»] scaffold0342 (1 HSPs)
scaffold0342 (14-119)||(5373-5479)
[»] scaffold0706 (1 HSPs)
scaffold0706 (14-134)||(7240-7361)
[»] scaffold0125 (1 HSPs)
scaffold0125 (42-149)||(28182-28289)
[»] scaffold0042 (1 HSPs)
scaffold0042 (168-242)||(51966-52039)
[»] scaffold1957 (1 HSPs)
scaffold1957 (100-152)||(120-173)
[»] scaffold0737 (1 HSPs)
scaffold0737 (202-245)||(6036-6079)
[»] scaffold0003 (1 HSPs)
scaffold0003 (14-101)||(147003-147091)


Alignment Details
Target: chr7 (Bit Score: 160; Significance: 2e-85; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 11054316 - 11054551
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||  ||||||||||| ||||||    
T  11054316 gacaacatcagattttcaaccttcacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctatatgttcctgacacttagc 11054415  T
Q  114 cctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttccaaacctcacataatcccttatttgcaaaaacgtttagacaccg 212  Q
    ||||||||||| || || ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11054416 cctatcataatatatagaaaaattcaagtttcaaccaccc-aaaaaaatcgatttccaaacctcacataatcccttatttgcaaaaacgtttagacaccg 11054514  T
Q  213 acttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    |||||||||||||||||||||||||||||||||||||    
T  11054515 acttttcaagcgaaaatcccaattttcatcaacccaa 11054551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 21 - 246
Target Start/End: Complemental strand, 19486403 - 19486179
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    ||||||||||||| |||||||||||||||||||||| ||| | ||||| | |||||||| ||||||||| ||| || | ||||||| |||||| ||||||    
T  19486403 tcagattttcaaccttcacgttttcgctcataaaaaccaatccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagctctatca 19486304  T
Q  121 taatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccgactttt 218  Q
    ||||||| || ||||||||||||| ||||||||        ||| ||||| ||||||||||||||| |||||||||| |||||||||||| |||||| ||    
T  19486303 taatctatagaaaaattcaagtttaaaccaccc---aaaaatcggtttccaaaacctcacataatcacttatttgcagaaacgtttagacgccgactatt 19486207  T
Q  219 caagcgaaaatcccaattttcatcaacc 246  Q
    ||||||||||||||||||||||||||||    
T  19486206 caagcgaaaatcccaattttcatcaacc 19486179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 37784802 - 37784671
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||| ||||||    
T  37784802 gacagcatcagattttcaaccttcacattttcgctcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgttcctgacacttagc 37784703  T
Q  114 cctatcataatctacag-aaaattcaagtttc 144  Q
    ||||||||||||||||| ||||||||||||||    
T  37784702 cctatcataatctacagaaaaattcaagtttc 37784671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 13256297 - 13256531
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  ||||||||||||| | |||||   |||| ||||| | |||||||| |  |||||| ||| || | ||||||| |||||    
T  13256297 gacaacatcagattttctaattttcacgttttcgcgcgtaaaatctaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttag 13256396  T
Q  113 ccctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacac 210  Q
    | |||||||||||||||||||| |||||||||||||||||         |||||||||| |||||||||||||| ||||||||||||| |||||||||||    
T  13256397 ctctatcataatctacagaaaaattcaagtttcaaccacc---aaaaaatcgatttccagaacctcacataatcacttatttgcaaaa-cgtttagacac 13256492  T
Q  211 cgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||| |||||||||||||||||||||||||||||||||||    
T  13256493 cgagttttcaagcgaaaatcccaattttcatcaacccaa 13256531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 48274087 - 48274321
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| |||||||||| || | ||||||||||||| | |||||| |||||  |||| | |||||||| ||||||||| ||| |  | ||||||| | ||||    
T  48274087 gacagcatcagatttccacccttcacgttttcgcgcctaaaaaccaaaccattaacccgttttcgatgccgttttcgcctacgcgctcctgacacatagc 48274186  T
Q  114 cctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagacacc 211  Q
     |||||| ||||||||||||| ||| ||||||||||||||        ||| |||||||| |||||||||||| || |||||||||||  ||||||||||    
T  48274187 tctatcacaatctacagaaaaattccagtttcaaccacccaaaaa---tcggtttccaaaacctcacataatcactcatttgcaaaaatatttagacacc 48274283  T
Q  212 gacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  48274284 gactcttcaagcgaaaatcccaattttcatcaatccaa 48274321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 239
Target Start/End: Complemental strand, 17467830 - 17467607
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  ||||||||||||| | |||||  ||||| ||||| | |||||||| ||||||||| ||| |  | ||||||| |||||    
T  17467830 gacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacacttag 17467731  T
Q  113 ccctatcataatctacagaaaa-ttcaagttt-caaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagaca 209  Q
    | |||||||||||||||||||| ||||||||| |||||||||        |||||||||| ||||||||||| ||   | ||||||||||||||||||||    
T  17467730 ctctatcataatctacagaaaaattcaagttttcaaccacccaaaac---tcgatttccagaacctcacatactc---tgtttgcaaaaacgtttagaca 17467637  T
Q  210 ccgacttttcaagcgaaaatcccaattttc 239  Q
    |||| |||||||||||||||||||||||||    
T  17467636 ccgagttttcaagcgaaaatcccaattttc 17467607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 17585384 - 17585607
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  ||||||||||||| | |||||  ||||| ||||| | |||||||| ||||||||| ||| |  | ||||||| |||||    
T  17585384 gacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacacttag 17585483  T
Q  113 ccctatcataatctacag-aaaattcaag-tttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagaca 209  Q
    | |||||||||||||||| |||||||||| ||||||||||||        |||||||||| ||||||||||| ||   | ||||||||||||||||||||    
T  17585484 ctctatcataatctacagaaaaattcaagttttcaaccaccc---aaaactcgatttccagaacctcacatactc---tgtttgcaaaaacgtttagaca 17585577  T
Q  210 ccgacttttcaagcgaaaatcccaattttc 239  Q
    |||| |||||||||||||||||||||||||    
T  17585578 ccgagttttcaagcgaaaatcccaattttc 17585607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 168 - 245
Target Start/End: Complemental strand, 13698933 - 13698856
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaac 245  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  13698933 ccaaacctcacataatcccttatttgcaaaaacgtttagacacctacttttcaagcgaaaatcccaatcttcatcaac 13698856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 26071070 - 26070944
Alignment:
Q  22 cagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcat 121  Q
    |||||||||||| |  |||||||||| |||||||||||||| |||||||||||||||| ||| ||||||||| | ||||| |||| |||||||||||| |    
T  26071070 cagattttcaacctcaacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccattttcacctacgtgttcatgacacttagccctatctt 26070971  T
Q  122 aatctacag-aaaattcaagtttcaac 147  Q
    ||| ||||| |||||||||||||||||    
T  26070970 aatgtacagaaaaattcaagtttcaac 26070944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 26094857 - 26094731
Alignment:
Q  22 cagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcat 121  Q
    |||||||||||| |  |||||||||| |||||||||||||| |||||||||||||||| ||| ||||||||| | ||||| |||| |||||||||||| |    
T  26094857 cagattttcaacctcaacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccattttcacctacgtgttcatgacacttagccctatctt 26094758  T
Q  122 aatctacag-aaaattcaagtttcaac 147  Q
    ||| ||||| |||||||||||||||||    
T  26094757 aatgtacagaaaaattcaagtttcaac 26094731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 147
Target Start/End: Original strand, 2028359 - 2028488
Alignment:
Q  19 catcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctat 118  Q
    ||||||||||||||| |  |||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| | ||||  |||| |||||||||||    
T  2028359 catcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacttgtttatgacacttagccctat 2028458  T
Q  119 cataatctacag-aaaattcaagtttcaac 147  Q
    | |||| ||||| |||| ||||||||||||    
T  2028459 cttaatgtacagaaaaagtcaagtttcaac 2028488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 241
Target Start/End: Complemental strand, 3289205 - 3288980
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||| ||||| ||||||| |||||||  ||||  ||||| |  ||||||| ||||||||  ||| || ||||||||| |||||    
T  3289205 gacagcatcagattttctaactttcacattttcgcgcataaaatccaaattgttaacccattttcgatgccgtttttgcctacacgttcctgacacttag 3289106  T
Q  113 ccctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacac 210  Q
    | |||||||||||||||||||| ||||||||||||||||||        ||||||| || |||||||||||||| ||||||||| |||||| || |||||    
T  3289105 ctctatcataatctacagaaaatttcaagtttcaaccaccc---aaaaatcgattttcagaacctcacataatcacttatttgc-aaaacg-ttggacac 3289011  T
Q  211 cgacttttcaagcgaaaatcccaattttcat 241  Q
    ||||||||||| |  |||| |||||||||||    
T  3289010 cgacttttcaaacataaattccaattttcat 3288980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 112081 - 111955
Alignment:
Q  22 cagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcat 121  Q
    |||||||||||| | ||||||||||| ||||| |||||||| ||||||| |||||| | ||||||||||||| | ||||| |||| |||||||||||| |    
T  112081 cagattttcaacctccacgttttcgcgcataataatcaaaccgttaatccgttttcaatgccgttttcacctacgtgttcatgacacttagccctatctt 111982  T
Q  122 aatctacag-aaaattcaagtttcaac 147  Q
    | | ||||| |||||||||||||||||    
T  111981 agtgtacagaaaaattcaagtttcaac 111955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 168 - 249
Target Start/End: Original strand, 33001920 - 33001999
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    |||||||||||||||||||||||||| ||||||||||||  |||||||||| ||| ||||||||||||||||||||||||||    
T  33001920 ccaaacctcacataatcccttatttgtaaaaacgtttag--accgactttttaagagaaaatcccaattttcatcaacccaa 33001999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 3894477 - 3894589
Alignment:
Q  22 cagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcat 121  Q
    |||||||||||| | ||||||||||| |||||||||||||| ||||||| |||||||| ||||||||||||| | ||| | ||||  ||||||||||| |    
T  3894477 cagattttcaacctccacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacgtgtccatgacatttagccctatctt 3894576  T
Q  122 aatctacagaaaa 134  Q
    ||| |||||||||    
T  3894577 aatgtacagaaaa 3894589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 25123890 - 25124010
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||||| |  |||||||||| |||||||||||||| ||||||| ||||||||||||||||||||   |||| |||| ||||||| |    
T  25123890 gacaacatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgacgccgttttcactcacatgctcctaactcttaac 25123989  T
Q  114 cctatcataatctacagaaaa 134  Q
     ||||||||||  ||||||||    
T  25123990 actatcataatgcacagaaaa 25124010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 42057112 - 42056992
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||||| |  |||||||||| |||||||||||||| ||||||| |||||||| | ||||||||||| |||| |||| || ||||||    
T  42057112 gacaacatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgtcgttttcacctacatgctcctaacacttagc 42057013  T
Q  114 cctatcataatctacagaaaa 134  Q
     ||||||||||  ||||||||    
T  42057012 actatcataatgcacagaaaa 42056992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 149
Target Start/End: Original strand, 370704 - 370815
Alignment:
Q  38 acgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattc 137  Q
    |||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| || ||| || ||||||||||||||| ||| |||    
T  370704 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataatctacaaaaatttc 370803  T
Q  138 aagtttcaacca 149  Q
    | ||||||||||    
T  370804 atgtttcaacca 370815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 249
Target Start/End: Complemental strand, 40554932 - 40554727
Alignment:
Q  42 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 141  Q
    |||||| | ||||| |||||| ||||||| | ||| || || |||||| ||| ||   ||||||| ||| || ||||||||||||||||  | |||||||    
T  40554932 tttcgcacgtaaaattcaaaccgttaatcggattttgatgctgttttcgcctacactctcctgacacttggctctatcataatctacagctatttcaagt 40554833  T
Q  142 ttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttca 240  Q
     ||||||||||        ||||||||| ||||||||||||||| ||| |||||||||||||||| || ||||||||||||||  |||| ||||||| ||    
T  40554832 ctcaaccaccccaaaa---tcgatttcccaaacctcacataatctcttgtttgcaaaaacgtttaaactccgacttttcaagcataaattccaatttcca 40554736  T
Q  241 tcaacccaa 249  Q
    |||||||||    
T  40554735 tcaacccaa 40554727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 2190998 - 2190878
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||||| |  |||||||||| |||||||||||||| ||||||  |||||||| ||||||||| ||| |||| |||| || ||||||    
T  2190998 gacagcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaattcgttttcgatgccgttttcgcctacatgctcctaacacttagc 2190899  T
Q  114 cctatcataatctacagaaaa 134  Q
     ||||||||||  ||||||||    
T  2190898 actatcataatgcacagaaaa 2190878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 147
Target Start/End: Original strand, 3049019 - 3049154
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  |||||||||||||   |||||| ||||| ||||| |||||||||| ||||||||| ||| || | ||||||| |||||    
T  3049019 gacaacatcagattttccaattttcacgttttcgcgagtaaaaaccaaaccgttaacctgttttcgatgccgttttcgcctacacgctcctgacacttag 3049118  T
Q  113 ccctatcataatctacag-aaaattcaagtttcaac 147  Q
    ||||||| |||| ||||| |||||||||||||||||    
T  3049119 ccctatcttaatgtacagaaaaattcaagtttcaac 3049154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 10063199 - 10063120
Alignment:
Q  165 tttccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaa 244  Q
    |||| ||||||||||||||| || |||||||||||| |||||||| ||||| |||||||||||||| |||||||||||||    
T  10063199 tttcaaaacctcacataatcactcatttgcaaaaacatttagacatcgactcttcaagcgaaaatctcaattttcatcaa 10063120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 149
Target Start/End: Original strand, 13757987 - 13758098
Alignment:
Q  38 acgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattc 137  Q
    |||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| || ||| || |||||||||| |||| ||| |||    
T  13757987 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataatttacaaaaatttc 13758086  T
Q  138 aagtttcaacca 149  Q
    | ||||||||||    
T  13758087 atgtttcaacca 13758098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 149
Target Start/End: Complemental strand, 14251537 - 14251426
Alignment:
Q  38 acgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattc 137  Q
    |||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| || ||| || |||| |||||||||| ||| |||    
T  14251537 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactattataatctacaaaaatttc 14251438  T
Q  138 aagtttcaacca 149  Q
    | ||||||||||    
T  14251437 atgtttcaacca 14251426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 37380485 - 37380708
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  ||||||||||||| | |||||  ||||| ||||| | |||||| | | ||||||| ||| |  | ||||||| |||||    
T  37380485 gacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcaatgtcgttttcgcctacgcgctcctgacacttag 37380584  T
Q  113 ccctatcataatctacag-aaaattcaag-tttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagaca 209  Q
    | |||||||||||||||| |||||||||| ||||||||||||        |||||||||| ||||||||||| ||   | |||||||||||||| |||||    
T  37380585 ctctatcataatctacagaaaaattcaagttttcaaccaccc---aaaactcgatttccagaacctcacatactc---tgtttgcaaaaacgttgagaca 37380678  T
Q  210 ccgacttttcaagcgaaaatcccaattttc 239  Q
    |||| ||||||||| || ||||||||||||    
T  37380679 ccgagttttcaagcaaagatcccaattttc 37380708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 8756440 - 8756359
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||  ||||  |||||| |||| ||||||    
T  8756440 ccaaacctcacataatctcttgtttgcaaaaacgtttagactccgacttttcaagcataaattacaatttccatcgacccaa 8756359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 21734866 - 21734630
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| |||||||||||| || ||| ||||||| | |||||||| ||||| ||||| | |||||||| ||||||||| |||  | | ||||||  ||||||    
T  21734866 gacagcatcagattttcgaccttctcgttttcacgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgagacttagc 21734767  T
Q  114 cctatcataatctac-----agaaaattcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttaga 207  Q
     ||||||||||||||     | ||||||||||||||||||| ||        ||||||| ||||| ||||||| ||| ||||||||| |||||| || ||    
T  21734766 tctatcataatctaccgaaaaaaaaattcaagtttcaaccaacc----aaaatcgatttcccaaaactcacatgatctcttatttgc-aaaacg-ttgga 21734673  T
Q  208 caccgacttttcaagc-gaaaatcccaattttcatcaacccaa 249  Q
    |||| ||||||||| |  ||||||||||||||||| |||||||    
T  21734672 caccaacttttcaaacataaaatcccaattttcattaacccaa 21734630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 169 - 249
Target Start/End: Original strand, 29004831 - 29004909
Alignment:
Q  169 caaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||||| || ||||||||||||  |||||||||||||||||||||||  |||||| |||||||||| |||||||    
T  29004831 caaacctcacatagtctcttatttgcaaa--cgtttagacaccgacttttcaaggaaaaatctcaattttcattaacccaa 29004909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 149
Target Start/End: Complemental strand, 18980659 - 18980548
Alignment:
Q  38 acgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattc 137  Q
    |||||||||| ||| |||||||||| |||||||  ||||||| || |||||||||| |||| |||| || ||| || ||||||||||||||| ||| |||    
T  18980659 acgttttcgcgcattaaaatcaaaccgttaatccattttcgatgcagttttcacctacatgctcctaacacttggcactatcataatctacaaaaatttc 18980560  T
Q  138 aagtttcaacca 149  Q
    | ||| ||||||    
T  18980559 atgttccaacca 18980548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 149
Target Start/End: Original strand, 15927186 - 15927296
Alignment:
Q  40 gttttcgctcataaaaatcaaacagttaatctgttttcgacgccg-ttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattca 138  Q
    |||||||| |||||||||||||| ||||||| |||||||| |||| ||||| ||| |||| |||| |  ||| || ||||||||||||||| ||| ||||    
T  15927186 gttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgtttttcgcctacatgctcctaatacttggcactatcataatctacaaaaatttca 15927285  T
Q  139 agtttcaacca 149  Q
     ||||||||||    
T  15927286 tgtttcaacca 15927296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 242
Target Start/End: Complemental strand, 8249520 - 8249465
Alignment:
Q  186 cttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatc 242  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  8249520 cttatttgcaaaa-cgtttagacaccgacttttcaaacgaaaatcccaatttccatc 8249465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 135
Target Start/End: Complemental strand, 10063316 - 10063204
Alignment:
Q  23 agattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcata 122  Q
    ||||||||| | ||||||||||||| | |||||||| ||| ||||| | |||||||| ||||||||||||| |    ||||||| |||||| |||||| |    
T  10063316 agattttcacccttcacgttttcgcgcctaaaaatcgaaccgttaacccgttttcgatgccgttttcacctacgcactcctgacacttagctctatcaca 10063217  T
Q  123 atctacagaaaat 135  Q
    ||||||| |||||    
T  10063216 atctacataaaat 10063204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 249
Target Start/End: Original strand, 13898230 - 13898313
Alignment:
Q  165 tttccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    |||||||||||||||||||| ||||||||| |||||||||| ||  ||||||||||| ||||||  ||||||| |||| ||||||    
T  13898230 tttccaaacctcacataatctcttatttgc-aaaacgtttatacttcgacttttcaaacgaaaactccaatttccatcgacccaa 13898313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 15525388 - 15525268
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||||| |  |||||||||| |||||||||||||| ||||||| |||| | | ||||||||| ||| |||  |||| || |||||     
T  15525388 gacagcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgtttgcaatgccgttttcgcctacattctcctaacacttagt 15525289  T
Q  114 cctatcataatctacagaaaa 134  Q
     ||||||||||  ||||||||    
T  15525288 actatcataatgcacagaaaa 15525268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 149
Target Start/End: Original strand, 28720332 - 28720439
Alignment:
Q  42 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 141  Q
    |||||| | ||||| |||||| ||||||| | ||| || ||||||||| ||| || | ||||||| ||| || ||||||||||||||||||| |||||||    
T  28720332 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgctcctgacacttggctctatcataatctacagaaatttcaagt 28720431  T
Q  142 ttcaacca 149  Q
     |||||||    
T  28720432 ctcaacca 28720439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 4280729 - 4280849
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| |||||||||||| || ||||||||||||| | |||||| | ||| ||||| | |||||||| ||||||||| ||| || | || |||  | ||||    
T  4280729 gacagcatcagattttcgaccttcacgttttcgcgcgtaaaaacccaaccgttaacccgttttcgatgccgttttcgcctacacgctcatgagacatagc 4280828  T
Q  114 cctatcataatctacagaaaa 134  Q
     |||||||||||||| |||||    
T  4280829 tctatcataatctaccgaaaa 4280849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 48744297 - 48744369
Alignment:
Q  174 ctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacc 246  Q
    |||||||| || ||||||||||| ||||||||||| ||||||||||||||  |||  ||||||||||| ||||    
T  48744297 ctcacatagtctcttatttgcaagaacgtttagactccgacttttcaagcataaactccaattttcatgaacc 48744369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 249
Target Start/End: Complemental strand, 21734270 - 21734071
Alignment:
Q  50 ataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctac----agaaaattcaagtttca 145  Q
    ||||||| ||||| ||||| | |||||||| ||||||||| |||  | | ||||||  |||||| ||||||||||||||    | |||||||||||||||    
T  21734270 ataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgagacttagctctatcataatctaccgaaaaaaaattcaagtttca 21734171  T
Q  146 accacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagc-gaaaatcccaattttcatca 243  Q
    |||| ||        ||||||| ||||| ||||||| ||| ||||||||| |||||| || |||||| ||||||||| |  ||||||||||||||||| |    
T  21734170 accaacc----aaaatcgatttcccaaaactcacatgatctcttatttgc-aaaacg-ttggacaccaacttttcaaacataaaatcccaattttcatta 21734077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 13866573 - 13866472
Alignment:
Q  19 catcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagcccta 117  Q
    |||||||||||| ||  ||||||||||||| | |||||| ||||| ||||| |||||||||| | ||||||| ||| || | ||||||| |||||| |||    
T  13866573 catcagattttccaattttcacgttttcgcgcgtaaaaaccaaaccgttaaactgttttcgatgtcgttttcgcctacacgctcctgacacttagctcta 13866474  T
Q  118 tc 119  Q
    ||    
T  13866473 tc 13866472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 160; Significance: 2e-85; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 51476596 - 51476831
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| |||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||  ||||||    
T  51476596 gacagcatcagattttcaaccctcacgttttcgctcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgttcctgaaacttagc 51476695  T
Q  114 cctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttccaaacctcacataatcccttatttgcaaaaacgtttagacaccg 212  Q
    ||||||||||||||||| ||||||||||||||||||||||        ||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  51476696 cctatcataatctacagaaaaattcaagtttcaaccaccc-aaaaaaatcgatttccaaacctcacacaatcccttatttacaaaaacgtttagacaccg 51476794  T
Q  213 acttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    |||||||||||||||||||||||||||||||||||||    
T  51476795 acttttcaagcgaaaatcccaattttcatcaacccaa 51476831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 14 - 248
Target Start/End: Original strand, 52983831 - 52984064
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||||| |||||||||| || |||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||  ||||||    
T  52983831 gacagcatcagattttcaaccttcacgtttttgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgttcctgaaacttagc 52983930  T
Q  114 cctatcataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacacc 211  Q
    |||||||||||||||||||| |||||||||||||||||||        ||||||| ||||||||||||||||| ||||||||||||||||||||||| ||    
T  52983931 cctatcataatctacagaaatattcaagtttcaaccaccc---aaaaatcgatttcccaaacctcacataatctcttatttgcaaaaacgtttagactcc 52984027  T
Q  212 gacttttcaagcgaaaatcccaattttcatcaaccca 248  Q
    ||||||||||| | |||| ||||||| |||| |||||    
T  52984028 gacttttcaagtgtaaattccaatttccatcgaccca 52984064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 21 - 242
Target Start/End: Original strand, 21473404 - 21473623
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    ||||||||||||| |||||||||| |  |||||||||||||| ||||| | |||||||| ||||||||| ||| || | ||||||| |||||||||||||    
T  21473404 tcagattttcaaccttcacgtttttgaacataaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagccctatca 21473503  T
Q  121 taatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgactttt 218  Q
    ||||||||| ||| |||||||||||||||||||        ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||| ||    
T  21473504 taatctacaaaaagattcaagtttcaaccaccc---aaaaatcgatttcccaaacctcacataatctcttatttgc-aaaacgtttagacaccgactatt 21473599  T
Q  219 caagcgaaaatcccaattttcatc 242  Q
    ||| ||||||||||||||| ||||    
T  21473600 caaacgaaaatcccaatttccatc 21473623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 21 - 242
Target Start/End: Original strand, 18824232 - 18824451
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    ||||||||||||| ||||||||||||| |||||||||||||| ||||| | |||||||| ||| ||||| ||| || | ||||||| |||||| ||||||    
T  18824232 tcagattttcaaccttcacgttttcgcacataaaaatcaaaccgttaacccgttttcgatgccattttcgcctacacgctcctgacacttagctctatca 18824331  T
Q  121 taatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgactttt 218  Q
    |||||||||| |||||||||||||||||||||         | ||||| ||||||||||||||||| ||||||||| ||||| |||||||||||||||||    
T  18824332 taatctacagaaaaattcaagtttcaaccacc---taaaaattgatttcccaaacctcacataatctcttatttgc-aaaacctttagacaccgactttt 18824427  T
Q  219 caagcgaaaatcccaattttcatc 242  Q
    ||| |||||||| |||||| ||||    
T  18824428 caaacgaaaatctcaatttccatc 18824451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 18270929 - 18271163
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  ||||||||||||| | |||||  ||||| ||||| |||||||||| ||||||||| ||| || | ||||||| |||||    
T  18270929 gacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacctgttttcgatgccgttttcgcctacacgctcctgacacttag 18271028  T
Q  113 ccctatcataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacac 210  Q
    | ||||||||||||||| ||| |||||||||||||||||||        ||||||| ||||||||||||||||| ||||||||| |||||||||||||||    
T  18271029 ctctatcataatctacaaaaagattcaagtttcaaccaccc---aaaaatcgatttcccaaacctcacataatctcttatttgc-aaaacgtttagacac 18271124  T
Q  211 cgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    | | ||||||| ||||||||||||||| |||||||||||    
T  18271125 caatttttcaaacgaaaatcccaatttccatcaacccaa 18271163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 18275583 - 18275817
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  ||||||||||||| | |||||  ||||| ||||| |||||||||| ||||||||| ||| || | ||||||| |||||    
T  18275583 gacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacctgttttcgatgccgttttcgcctacacgctcctgacacttag 18275682  T
Q  113 ccctatcataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacac 210  Q
    | ||||||||||||||| ||| |||||||||||||||||||        ||||||| ||||||||||||||||| ||||||||| |||||||||||||||    
T  18275683 ctctatcataatctacaaaaagattcaagtttcaaccaccc---aaaaatcgatttcccaaacctcacataatctcttatttgc-aaaacgtttagacac 18275778  T
Q  211 cgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    | | ||||||| ||||||||||||||| |||||||||||    
T  18275779 caatttttcaaacgaaaatcccaatttccatcaacccaa 18275817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 42 - 249
Target Start/End: Original strand, 51324137 - 51324343
Alignment:
Q  42 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 141  Q
    |||||| | ||||| |||||| ||||||| | ||| || | ||||||| ||| |||| ||||||| ||| || ||||||||||||||||||| |||||||    
T  51324137 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgtcgttttcgcctacatgctcctgacacttggctctatcataatctacagaaatttcaagt 51324236  T
Q  142 ttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttca 240  Q
     ||||||| ||        ||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  51324237 ctcaaccatcccaagaa--tcattttcccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttgaagcgaaaatcccaattttca 51324334  T
Q  241 tcaacccaa 249  Q
    |||||||||    
T  51324335 tcaacccaa 51324343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 13528157 - 13527924
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||| ||||||||||||| | |||||  ||||| ||||| |  ||||||| | ||||||| ||| || | ||||||| |||||    
T  13528157 gacaacatcagattttctaactttcacgttttcgcgcgtaaaatccaaaccgttaacccattttcgatgtcgttttcgcctacacgctcctgacacttag 13528058  T
Q  113 ccctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagacac 210  Q
    || ||||||||||||||||||| ||||||||||||||||||        |||||||||||| |||||||||||| ||||||||||||  |||||||||||    
T  13528057 ccttatcataatctacagaaaaattcaagtttcaaccacccaaaaa---tcgatttccaaaacctcacataatcgcttatttgcaaa--cgtttagacac 13527963  T
Q  211 cgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    |||||||||||| |||||||||||||| ||| |||||||    
T  13527962 cgacttttcaagggaaaatcccaatttccattaacccaa 13527924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 40 - 245
Target Start/End: Complemental strand, 7321014 - 7320812
Alignment:
Q  40 gttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaa 139  Q
    |||||||| | |||||  ||||| ||||||| |||||||| | ||||||| ||| || | ||||||| |||||| |||||||||||| ||||||||||||    
T  7321014 gttttcgcgcgtaaaatccaaaccgttaatccgttttcgatgtcgttttcgcctacacgctcctgacacttagctctatcataatctgcagaaaattcaa 7320915  T
Q  140 gtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaatttt 238  Q
    |||| ||||||||        |||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||| |||||||    
T  7320914 gttttaaccacccaaaaa---tcgatttccagaacctcacataatcacttatttgcaaaaacgtttatacaccgacttttcaagcg-aaatcacaatttt 7320819  T
Q  239 catcaac 245  Q
    |||||||    
T  7320818 catcaac 7320812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 42 - 249
Target Start/End: Complemental strand, 21239464 - 21239258
Alignment:
Q  42 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 141  Q
    |||||| | ||||| |||||| ||||||| | ||| || ||||||||  ||| || | ||||||| ||| || ||||||||||||||||||  |||||||    
T  21239464 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgtttttgcctacacgctcctgacacttggctctatcataatctacagaattttcaagt 21239365  T
Q  142 ttcaaccacccnnnnnnnntcgatttc-caaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttca 240  Q
     ||||||| ||        ||  |||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  21239364 ctcaaccatccgaagaa--tcattttctcaaacctcacataatcccttatttgcaaaatcgttttgacaccgacttttcaagcgaaaatcccaattttca 21239267  T
Q  241 tcaacccaa 249  Q
    |||||||||    
T  21239266 tcaacccaa 21239258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 27330558 - 27330432
Alignment:
Q  22 cagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcat 121  Q
    |||||||||||| ||||||||||||| |||||||||||||| ||||||| ||||||||  |||||||||||| | ||||| |||| |||||||||||| |    
T  27330558 cagattttcaaccttcacgttttcgcgcataaaaatcaaactgttaatccgttttcgataccgttttcacctacgtgttcatgacacttagccctatctt 27330459  T
Q  122 aatctacag-aaaattcaagtttcaac 147  Q
    ||| ||||| |||||||||||||||||    
T  27330458 aatgtacagaaaaattcaagtttcaac 27330432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 20058088 - 20058312
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  ||||||||||||  | |||||  |||||  |||| | |||||||| ||||||||| ||| || | |||||||  ||||    
T  20058088 gacaacatcagattttccaattttcacgttttcgtgcgtaaaatccaaaccattaacccgttttcgatgccgttttcgcctacacgctcctgacagttag 20058187  T
Q  113 ccctatcataatctacagaaaat-tcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacac 210  Q
    | ||||||||||||||| ||||  |||||||||||||||||        ||| |||||| |||||||||||||  ||||||||||||| |||||||||||    
T  20058188 ctctatcataatctacaaaaaaaatcaagtttcaaccacccaaaaa---tcggtttccagaacctcacataattacttatttgcaaaa-cgtttagacac 20058283  T
Q  211 cgacttttcaagcgaaaatcccaattttc 239  Q
    | |||||||||||||||||||||||||||    
T  20058284 caacttttcaagcgaaaatcccaattttc 20058312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 168 - 250
Target Start/End: Complemental strand, 20030934 - 20030853
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaat 250  Q
    |||||||||||||| || ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  20030934 ccaaacctcacatagtctcttatttgcaaaa-cgtttagacaccgacttttcaagggaaaatcccaattttcattaacccaat 20030853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 35054221 - 35054347
Alignment:
Q  22 cagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcat 121  Q
    |||||||||||| | || |||||||| |||||||||||||| ||||||| |||||||| ||||||||||||| | |||||  ||| | |||||||||| |    
T  35054221 cagattttcaacctccaagttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacgtgttcaagacacctagccctatctt 35054320  T
Q  122 aatctacag-aaaattcaagtttcaac 147  Q
    ||| || || |||||||||||||||||    
T  35054321 aatgtaaagaaaaattcaagtttcaac 35054347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 7791850 - 7791770
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    |||||||||||||| || ||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||| |||||||    
T  7791850 ccaaacctcacatagtctcttatttgcaaaa-cgtttagacaccgacttttcaagggaaagtcccaattttcattaacccaa 7791770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 20825573 - 20825453
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||||| |  |||||||||| |||||||||||||| ||||||| |||||||| | ||||||| ||| |||| |||| || ||||||    
T  20825573 gacaacatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgtcgttttcgcctacatgctcctaacacttagc 20825474  T
Q  114 cctatcataatctacagaaaa 134  Q
     ||||||||||  ||||||||    
T  20825473 actatcataatgcacagaaaa 20825453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 149
Target Start/End: Original strand, 17148185 - 17148296
Alignment:
Q  38 acgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattc 137  Q
    |||||||||| |||||||||||||  ||||||| |||||||| || |||||| ||| |||| |||| || ||| || ||||||||||||||| ||| |||    
T  17148185 acgttttcgcgcataaaaatcaaatcgttaatccgttttcgatgcagttttcgcctacatgctcctaacacttggcactatcataatctacaaaaatttc 17148284  T
Q  138 aagtttcaacca 149  Q
    | ||||||||||    
T  17148285 atgtttcaacca 17148296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 21660130 - 21660183
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaa 221  Q
    ||||||||||||||||| ||| ||| ||||||||||||||| |||||| |||||    
T  21660130 ccaaacctcacataatctctttttttcaaaaacgtttagactccgactcttcaa 21660183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 149
Target Start/End: Original strand, 39060977 - 39061084
Alignment:
Q  42 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 141  Q
    |||||| | ||||| |||||| ||||||| | ||| || | ||||||| ||| || | ||||||| |||| | ||||||||||||||||||| | |||||    
T  39060977 tttcgcgcgtaaaattcaaactgttaatcagattttgatgtcgttttcgcctacacgctcctgacacttaactctatcataatctacagaaattccaagt 39061076  T
Q  142 ttcaacca 149  Q
     |||||||    
T  39061077 ctcaacca 39061084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 152; Significance: 1e-80; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 22584102 - 22583869
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||||||| ||||||||||| |||||||||| || |||||||| ||||| |||||||| ||||||| ||||||||||||| |||||||||||| ||||||    
T  22584102 gacatcattagattttcaaccttcacgtttttgcgcataaaaaacaaaccgttaatctattttcgatgccgttttcacctacatgttcctgacacttagc 22584003  T
Q  114 cctatcataatctac-agaaaattcaagtttcaaccacccnnnnnnnntcgatttccaaacctcacataatcccttatttgcaaaaacgtttagacaccg 212  Q
    ||||||||||||||| | ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22584002 cctatcataatctacaaaaaaattcaagtttcaaccaccc---aaaaatcgatttccaaacctcacataatcccttatttgcaaaaacgtttagacaccg 22583906  T
Q  213 acttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||||||||||||||||| |||||||||||    
T  22583905 acttttcaagcgaaaatcccaatttccatcaacccaa 22583869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 23889410 - 23889642
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||| ||||||||| ||||| ||||||| ||| |||||||||| |||||||||||||||| ||||||||||||| ||||||||| |   |||||    
T  23889410 gacaacatcaaattttcaaccttcacattttcgcgcattaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgttcctaatatttagc 23889509  T
Q  114 cctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttccaaacctcacataatcccttatttgcaaaaacgtttagacaccg 212  Q
    ||||||||||||||||| ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23889510 cctatcataatctacagaaaaattcaagtttcaaccaccc----aaaatcgatttccaaacctcacataatcccttatttgcaaaaacgtttagacaccg 23889605  T
Q  213 acttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    | |||||||||||||||| |||||| |||||||||||    
T  23889606 atttttcaagcgaaaatctcaatttccatcaacccaa 23889642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 21 - 249
Target Start/End: Original strand, 3273499 - 3273728
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    ||||||||||||| ||||||||| ||| |||||||| ||||  ||||| | ||||| || ||||||||| ||| || | ||||||| |||||| ||||||    
T  3273499 tcagattttcaaccttcacgtttccgcgcataaaaaccaaatcgttaacccgtttttgatgccgttttcgcctacacgctcctgacacttagctctatca 3273598  T
Q  121 taatctacaga-aaattcaagtttcaaccacccnnnnnnnntcgatttccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttc 219  Q
    || |||||||| |||||||||||||||||||||        ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  3273599 tattctacagataaattcaagtttcaaccacccaaaaaaaatcgatttccaaacctcacatactcccttatttgcaaaaacgtttagacaccaacttttc 3273698  T
Q  220 aagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||||||||||||||||||||||    
T  3273699 aagcgaaaatcccaattttcatcaacccaa 3273728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 21 - 236
Target Start/End: Original strand, 34302161 - 34302376
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    ||||||||||||| | ||||||||||| |||||||| ||| | ||||| | |||||||| ||||||||| ||| || | |||| || |||||| ||||||    
T  34302161 tcagattttcaacctgcacgttttcgcgcataaaaaccaagccgttaacccgttttcgatgccgttttcgcctacacgctcctaacacttagctctatca 34302260  T
Q  121 taatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttc 219  Q
    |||||||| ||||| ||||||||||||||||||        |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  34302261 taatctacggaaaaattcaagtttcaaccacccaaaaaaaatcgatttccaaacctcacataatctcttatttgcaaaa-cgtttagacaccgacttttc 34302359  T
Q  220 aagcgaaaatcccaatt 236  Q
    || ||||||||||||||    
T  34302360 aaacgaaaatcccaatt 34302376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 24 - 242
Target Start/End: Original strand, 23451086 - 23451305
Alignment:
Q  24 gattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataa 123  Q
    |||||| ||||||||||||||||| | |||||||||||| |||||   |||||||| ||||||||| ||| || | ||||||| |||| | |||||||||    
T  23451086 gatttttaacattcacgttttcgcgcgtaaaaatcaaaccgttaactcgttttcgatgccgttttcgcctacacgctcctgacacttaactctatcataa 23451185  T
Q  124 tctacag-aaaattcaagtttcaaccacccnnnnnnnntcga-tttccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaa 221  Q
    ||||||| ||||||||||||||||||||||        |||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  23451186 tctacagaaaaattcaagtttcaaccacccaaaaaaaatcgattttccaaacctcacataatctcttatttgc-aaaacgtttagacaccgacttttcaa 23451284  T
Q  222 gcgaaaatcccaattttcatc 242  Q
     | ||||||||||||| ||||    
T  23451285 actaaaatcccaatttccatc 23451305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 26220156 - 26220390
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||| | ||||||||||||| | |||||||||||| ||||| | |||||||| ||||||||  ||| |  | ||||||| ||||||    
T  26220156 gacagcatcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaacccgttttcgatgccgtttttgcctacgcgctcctgacacttagc 26220255  T
Q  114 cctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagacacc 211  Q
     |||||||||||||||||||| ||  ||||||||||||||        | | |||||||| |||||||||||| || |||||||||||| ||||||||||    
T  26220256 tctatcataatctacagaaaaatttcagtttcaaccacccaaaaa---ttggtttccaaaacctcacataatcactcatttgcaaaaacatttagacacc 26220352  T
Q  212 gacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  26220353 gactcttcaagcgaaaatcccaattttcatcaatccaa 26220390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 44 - 242
Target Start/End: Original strand, 24496237 - 24496436
Alignment:
Q  44 tcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaa-ttcaagtt 142  Q
    |||| |||||||| | ||| ||||| | |||||||| | ||||||| ||| || | ||||||| |||||| |||||||||||||||||||| ||||||||    
T  24496237 tcgcgcataaaaacctaaccgttaacccgttttcgatggcgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaagtt 24496336  T
Q  143 tcaaccacccnnnnnnnntcgatttc-caaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcat 241  Q
    |||||||||         |||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||    
T  24496337 tcaaccacctaaaaaaaatcgatttcacaaacctcacataatctcttatttgcaaaa-cgtttagacaccgacttttcaaacgaaaatcccaatttccat 24496435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 242
Target Start/End: Complemental strand, 17611734 - 17611507
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  |||||||||||||   |||||  ||||| ||||| | |||||||| ||||||||| ||| || | ||||||| ||||     
T  17611734 gacaacatcagattttctaattttcacgttttcgcgtgtaaaatccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttaa 17611635  T
Q  113 ccctatcataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacac 210  Q
    | ||||||||||||||| ||| |||||||||||||||||||        ||||||||| ||||||||||||||| ||||||||||||| |||||||||||    
T  17611634 ctctatcataatctacaaaaagattcaagtttcaaccacccaaaaa---tcgatttcccaaacctcacataatctcttatttgcaaaa-cgtttagacac 17611539  T
Q  211 cgacttttcaagcgaaaatcccaattttcatc 242  Q
    ||||| ||||| ||||||||||||||| ||||    
T  17611538 cgactattcaaacgaaaatcccaatttccatc 17611507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 22532426 - 22532345
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  22532426 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgactcttctagcgaaaatcccaattttcatcaacccaa 22532345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 22537111 - 22537030
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  22537111 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgactcttctagcgaaaatcccaattttcatcaacccaa 22537030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 73 - 246
Target Start/End: Original strand, 24979780 - 24979951
Alignment:
Q  73 ttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttcc-a 170  Q
    ||||||| ||||||||| ||| || | ||||||| |||||| |||||||||||||||||||| ||||||||||||||||||        | ||||||| |    
T  24979780 ttttcgatgccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccacccaaaaa---ttgatttccca 24979876  T
Q  171 aacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacc 246  Q
    |||||||||||||| ||||||||||||| |||||||||||| | ||||||| ||||||||||||||| ||||||||    
T  24979877 aacctcacataatctcttatttgcaaaa-cgtttagacaccaatttttcaaacgaaaatcccaatttccatcaacc 24979951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 39694572 - 39694491
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  39694572 ccaaacctcacataatcccttatttgcaaaaatgtttagacaccgacttttcaagcgaaaatctcaactttcatcaacccaa 39694491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 5080825 - 5080930
Alignment:
Q  19 catcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctat 118  Q
    ||||||||||||||| | || |||||||| |||||||||||||| |||||||||||||||| ||||||||||||| |||||||||| | |||||  ||||    
T  5080825 catcagattttcaacctacatgttttcgcgcataaaaatcaaactgttaatctgttttcgatgccgttttcacctacatgttcctgccacttagtactat 5080924  T
Q  119 cataat 124  Q
    ||||||    
T  5080925 cataat 5080930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 273879 - 274007
Alignment:
Q  20 atcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatc 119  Q
    |||||||||||||| | ||||||||||| |||||||||||||| ||||||| |||||||| ||||||||||||| |||| |||| || |||||  |||||    
T  273879 atcagattttcaacctccacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacatgctcctaacacttagtactatc 273978  T
Q  120 ataatctacag-aaaattcaagtttcaac 147  Q
    |||||  |||| ||||| |||||||||||    
T  273979 ataatgcacagaaaaatccaagtttcaac 274007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 641970 - 641842
Alignment:
Q  20 atcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatc 119  Q
    |||||||||||||| | ||||||||||| |||||||||||||| ||||||| |||||||| ||||||||||||| |||| |||| || |||||  |||||    
T  641970 atcagattttcaacctccacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacatgctcctaacacttagtactatc 641871  T
Q  120 ataatctacag-aaaattcaagtttcaac 147  Q
    |||||  |||| ||||| |||||||||||    
T  641870 ataatgcacagaaaaatccaagtttcaac 641842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 149
Target Start/End: Complemental strand, 13721567 - 13721456
Alignment:
Q  38 acgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattc 137  Q
    |||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| || ||| || ||||||||||||||| ||| |||    
T  13721567 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataatctacaaaaatttc 13721468  T
Q  138 aagtttcaacca 149  Q
    | ||||||||||    
T  13721467 atgtttcaacca 13721456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 44522470 - 44522393
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacc 246  Q
    |||||||||||||| || ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  44522470 ccaaacctcacatagtctcttatttgcaaaa-cgtttagacaccgacttttcaagggaaaatcccaattttcattaacc 44522393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 827776 - 827648
Alignment:
Q  20 atcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatc 119  Q
    ||||||||||  || | ||||||||||| |||||||||||||| ||||||| |||||||| ||||||||||||| |||| |||| || |||||  |||||    
T  827776 atcagattttggacctccacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacatgctcctaacacttagtactatc 827677  T
Q  120 ataatctacag-aaaattcaagtttcaac 147  Q
    |||||  |||| ||||| |||||||||||    
T  827676 ataatgcacagaaaaatccaagtttcaac 827648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 149
Target Start/End: Complemental strand, 16873690 - 16873579
Alignment:
Q  38 acgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattc 137  Q
    |||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| || ||| || |||||||||| |||| ||| |||    
T  16873690 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataatttacaaaaatttc 16873591  T
Q  138 aagtttcaacca 149  Q
    | ||||||||||    
T  16873590 atgtttcaacca 16873579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 26222724 - 26222590
Alignment:
Q  19 catcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctat 118  Q
    ||||||||||||| | |||| |||||||| | |||||||||||| ||||| | |||||||| ||||||||| ||| |  | ||||||| |||||| ||||    
T  26222724 catcagattttcacccttcatgttttcgcgcctaaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacacttagctctat 26222625  T
Q  119 cataatctacag-aaaattcaagtttcaaccaccc 152  Q
    || ||||||||| ||||||  ||||||||||||||    
T  26222624 cacaatctacagaaaaatttcagtttcaaccaccc 26222590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 249
Target Start/End: Original strand, 32950661 - 32950742
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||  |||| |||| || |||||||||||    
T  32950661 ccaaacctcacataatctcttgtttgcaaaaacgtttagactccgacttttcaagcttaaattccaacttccatcaacccaa 32950742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 16039703 - 16039583
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||| ||||||||||| |  |||||||||| ||||||||||||||  |||||| |||||||| | ||||||||||| |||| |||| || ||||||    
T  16039703 gacagcatgagattttcaacttctacgttttcgcgcataaaaatcaaaccattaatccgttttcgatgtcgttttcacctacatgctcctaacacttagc 16039604  T
Q  114 cctatcataatctacagaaaa 134  Q
     ||||||||||  ||||||||    
T  16039603 actatcataatgcacagaaaa 16039583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 147
Target Start/End: Original strand, 20481057 - 20481170
Alignment:
Q  35 ttcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaa 134  Q
    |||| |||||||| | |||||| ||||| ||||| | |||||||| ||||||||| ||| |||| ||||||| |||| ||||||| |||| |||||||||    
T  20481057 ttcaagttttcgcgcgtaaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacatgctcctgacacttaaccctatcttaatgtacagaaaa 20481156  T
Q  135 -ttcaagtttcaac 147  Q
     |||||||||||||    
T  20481157 attcaagtttcaac 20481170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 49 - 149
Target Start/End: Complemental strand, 3431910 - 3431810
Alignment:
Q  49 cataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagtttcaacc 148  Q
    |||||||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| || |||  | ||||||||||||||| ||| |||| |||||||||    
T  3431910 cataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttgacactatcataatctacaaaaatttcatgtttcaacc 3431811  T
Q  149 a 149  Q
    |    
T  3431810 a 3431810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 124
Target Start/End: Complemental strand, 24386560 - 24386456
Alignment:
Q  20 atcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatc 119  Q
    |||||||||||||| |  || ||||||| |||||||||||||| ||||||| |||||||| | ||||||||||| |||| || | || |||||| |||||    
T  24386560 atcagattttcaacttctacattttcgcgcataaaaatcaaaccgttaatccgttttcgatgtcgttttcacctacatgctcttaacacttagcactatc 24386461  T
Q  120 ataat 124  Q
    |||||    
T  24386460 ataat 24386456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 149
Target Start/End: Original strand, 17501807 - 17501914
Alignment:
Q  42 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 141  Q
    |||||| | ||||| |||||| ||||||| | ||| || ||||||||| ||| || |  |||||| ||| || ||||||||||||||||||| |||||||    
T  17501807 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgcccctgacacttggctctatcataatctacagaaatttcaagt 17501906  T
Q  142 ttcaacca 149  Q
    ||||||||    
T  17501907 ttcaacca 17501914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 30766354 - 30766234
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| |||||||||||| || ||||||||||||| | |||||| | ||| ||||| | |||||| | ||||||||| ||| || | || |||  | ||||    
T  30766354 gacagcatcagattttcgaccttcacgttttcgcgcgtaaaaacccaaccgttaacccgttttcaatgccgttttcgcctacacgctcatgagacatagc 30766255  T
Q  114 cctatcataatctacagaaaa 134  Q
     |||||||||||||| |||||    
T  30766254 tctatcataatctaccgaaaa 30766234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 39364532 - 39364605
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcat 241  Q
    ||||| |||||||| || ||||||||||  ||||||||||| |||| |||||||||  |||  |||||||||||    
T  39364532 ccaaaactcacatagtctcttatttgcatgaacgtttagactccgaattttcaagcataaactccaattttcat 39364605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 149; Significance: 8e-79; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 45531052 - 45530816
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||| |||||||||  ||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||| |||||||||||| ||| ||    
T  45531052 gacaacatcatattttcaaccctcacgttttcgctcataaaaatcaaaccgttaatctgttttcgataccgttttcacctacatgttcctgacacttggc 45530953  T
Q  114 cctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttccaaacctcacataatcccttatttgcaaaaacgtttagacaccg 212  Q
    ||||||||||||||||| |||||||||||| |||||||||        | |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  45530952 cctatcataatctacagaaaaattcaagttccaaccacccaaaaaaaattgatttccaaacctcacataatcccctatttgcaaaaacgtttagacaccg 45530853  T
Q  213 acttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||||||||||| |||||||||||||||||    
T  45530852 acttttcaagcgaaaatcctaattttcatcaacccaa 45530816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 21 - 249
Target Start/End: Complemental strand, 37641935 - 37641708
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    ||||||||||||| |||||||||||||||||||||| ||||| ||||| | |||||||| ||||||||| ||| || | ||||||| |||||| ||||||    
T  37641935 tcagattttcaaccttcacgttttcgctcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagctctatca 37641836  T
Q  121 taatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccgactttt 218  Q
    ||||||| || ||||||||||||| ||||||||        ||| ||||| ||||||||||||||| |||||||||| ||||||||||||||||||| ||    
T  37641835 taatctatagaaaaattcaagtttaaaccaccc---aaaaatcggtttccaaaacctcacataatcacttatttgcataaacgtttagacaccgactatt 37641739  T
Q  219 caagcgaaaatcccaattttcatcaacccaa 249  Q
    |||||||||||||||||||||||||||||||    
T  37641738 caagcgaaaatcccaattttcatcaacccaa 37641708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 25 - 249
Target Start/End: Original strand, 14818700 - 14818923
Alignment:
Q  25 attttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataat 124  Q
    ||||||||| ||||||||||||| |||||||||||||| |||||||||||||||| ||| ||||||||| |||||||||||| |||||||||||||||||    
T  14818700 attttcaaccttcacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccattttcacctacatgttcctgacacttagccctatcataat 14818799  T
Q  125 ctacagaaa-attcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaag 222  Q
     |||| ||| |||||||||||||||||||        || |||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||    
T  14818800 atacataaagattcaagtttcaaccaccc---caaaatctatttcccaaacctcacataatctcttatttgcaaaaacatttagactccgacttttcaag 14818896  T
Q  223 cgaaaatcccaattttcatcaacccaa 249  Q
    |  |||| ||||||| |||| ||||||    
T  14818897 cataaattccaatttccatcgacccaa 14818923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 21 - 249
Target Start/End: Complemental strand, 29172289 - 29172064
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    ||||||||||||| ||||||||||||| |||||||||||||| ||||| | |||||||| ||||||||| |||  | | ||||||| |||||| ||||||    
T  29172289 tcagattttcaaccttcacgttttcgcacataaaaatcaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgacacttagctctatca 29172190  T
Q  121 taatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccgactttt 218  Q
    |||||||||| ||||||||||||||||||||||        ||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| |||    
T  29172189 taatctacagaaaaattcaagtttcaaccaccc---aaaaatcgatttccaaaacctcacataatcgcttatttgc-aaaacgtttagacaccgac-ttt 29172095  T
Q  219 caagcgaaaatcccaattttcatcaacccaa 249  Q
    |||| |||||||||||||||||| |||||||    
T  29172094 caagggaaaatcccaattttcattaacccaa 29172064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 14 - 152
Target Start/End: Original strand, 8604442 - 8604581
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||| ||||||    
T  8604442 gacagcatcagattttcaaccttcacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgttcctgacacttagc 8604541  T
Q  114 cctatcataatctacag-aaaattcaagtttcaaccaccc 152  Q
    ||||||||||| ||||| ||||||||||||||||| ||||    
T  8604542 cctatcataatgtacagaaaaattcaagtttcaacaaccc 8604581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 21 - 242
Target Start/End: Original strand, 13511677 - 13511899
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    ||||||||||||| ||||||||||| | |||||||| ||||| ||||| | |||||||| ||||||||| ||| || | ||||||  |||||| ||||||    
T  13511677 tcagattttcaaccttcacgttttcccgcataaaaaccaaaccgttaacccgttttcgatgccgttttctcctacacgctcctgaaacttagctctatca 13511776  T
Q  121 taatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgactttt 218  Q
    |||||||||| ||||||||||||||||||||||        || |||| ||||||||||||| ||| ||||||||| |||||||||||||||||||||||    
T  13511777 taatctacagaaaaattcaagtttcaaccacccaaaaaaaatctatttcccaaacctcacattatcgcttatttgc-aaaacgtttagacaccgactttt 13511875  T
Q  219 caagcgaaaatcccaattttcatc 242  Q
    ||| ||||||||||||||| ||||    
T  13511876 caaacgaaaatcccaatttccatc 13511899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 21 - 242
Target Start/End: Complemental strand, 24340382 - 24340163
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    ||||||||||||| |||||||||| |  |||||||||||||| ||||| | |||||||| ||||||||| ||| || | ||||||| |||||||||||||    
T  24340382 tcagattttcaaccttcacgtttttgaacataaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagccctatca 24340283  T
Q  121 taatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgactttt 218  Q
    ||||||||| ||| |||||||||||||||||||        ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||| ||    
T  24340282 taatctacaaaaagattcaagtttcaaccaccc---aaaaatcgatttcccaaacctcacataatctcttatttgc-aaaacgtttagacaccgactatt 24340187  T
Q  219 caagcgaaaatcccaattttcatc 242  Q
    ||| | ||||||||||||| ||||    
T  24340186 caaacaaaaatcccaatttccatc 24340163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 21 - 249
Target Start/End: Complemental strand, 22147197 - 22146971
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    ||||||||||||| |||||||||||||||||||||| ||||| ||||| | |||||||| ||||||||| |||  | | ||||||| |||||||||||||    
T  22147197 tcagattttcaaccttcacgttttcgctcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgacacttagccctatca 22147098  T
Q  121 taatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccgactttt 218  Q
    ||||||| || ||||||||||||| ||||||||        ||| ||||| ||||||||||||||| ||||||||| ||||| |||||||||||| | ||    
T  22147097 taatctatagaaaaattcaagtttaaaccaccc---aaaaatcggtttccaaaacctcacataatcacttatttgc-aaaacatttagacaccgaatctt 22147002  T
Q  219 caagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||| ||| |||||||||||||||    
T  22147001 caagcgaaaattccagttttcatcaacccaa 22146971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 36167135 - 36167369
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||| | ||||||||||||| | |||||||||||| ||||| | |||||||| ||||||||| ||| |  | ||||||| ||||||    
T  36167135 gacagcatcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacacttagc 36167234  T
Q  114 cctatcataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacacc 211  Q
     |||||| |||||||||||| |||| ||||||||||||||        ||| ||||| ||||||||||||||| || |||||| ||||| ||||||||||    
T  36167235 tctatcacaatctacagaaagattccagtttcaaccaccc---aaaaatcggtttccaaaacctcacataatcactcatttgccaaaacatttagacacc 36167331  T
Q  212 gacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  36167332 gactcttcaagcgaaaatcccaattttcatcaatccaa 36167369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 12536256 - 12536491
Alignment:
Q  14 gacatcatcagattttcaacatt-cacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| ||||||||||||||  || ||||||||| | | |||||  ||||| ||||| | |||||||| | ||||||| ||| || | ||||||| |||||    
T  12536256 gacaacatcagattttcaaattttcacgttttctcgcgtaaaatccaaaccgttaacccgttttcgatgtcgttttcgcctacacgctcctgacacttag 12536355  T
Q  113 ccctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacac 210  Q
    | |||||||||||||||||||| ||||||||||||||| ||        | | |||||| |||||||||||||| |||||||||||||||||||||||||    
T  12536356 ctctatcataatctacagaaaaattcaagtttcaaccatccaaaaa---ttggtttccagaacctcacataatcacttatttgcaaaaacgtttagacac 12536452  T
Q  211 cgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  12536453 cgacttttcaagcgaaaatcccaattttcatcaagccaa 12536491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 34851745 - 34851512
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| |||||||||||| |  ||||||||||| | | |||||  ||||| ||||| | |||||||| ||||||||| ||| || | ||||||| ||||||    
T  34851745 gacaacatcagattttctaatttcacgttttcacgcgtaaaatccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagc 34851646  T
Q  114 cctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagacacc 211  Q
     |||||||||||||||||||| || |||||||||||||||        |||||||||||| |||||||||||| ||||||||||||| |||||| |||||    
T  34851645 tctatcataatctacagaaaaatttaagtttcaaccacccaaata---tcgatttccaaaacctcacataatcacttatttgcaaaa-cgtttatacacc 34851550  T
Q  212 gacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    |||| |||||| |||||||||||||||||| |||||||    
T  34851549 gactcttcaagggaaaatcccaattttcattaacccaa 34851512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 21 - 242
Target Start/End: Original strand, 12158894 - 12159117
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    ||||||||||||| ||||||||||||| |||||||||||||| ||||| | |||||||| ||| ||||| ||| || | | ||||| |||| | ||||||    
T  12158894 tcagattttcaaccttcacgttttcgcgcataaaaatcaaaccgttaacccgttttcgatgccattttcgcctacacgct-ctgacacttaactctatca 12158992  T
Q  121 taatctacag-aaaattcaagtttcaaccaccc--nnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgactt 216  Q
    |||| ||||| ||||||||||||||||||||||          ||||||| |||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  12158993 taatttacagaaaaattcaagtttcaaccacccaaaaaaaaaatcgatttcccaaacctcagataatctcttatttgc-aaaacgtttagacaccgactt 12159091  T
Q  217 ttcaagcgaaaatcccaattttcatc 242  Q
    ||||| ||||||||||||||| ||||    
T  12159092 ttcaaacgaaaatcccaatttccatc 12159117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 21 - 242
Target Start/End: Complemental strand, 52338390 - 52338171
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    ||||||||||||| ||||||||||||| |||||||||||||| ||||| | |||||||| ||||||||  |||  |   ||||||| |||||| ||||||    
T  52338390 tcagattttcaaccttcacgttttcgcacataaaaatcaaaccgttaacccgttttcgatgccgtttttgcctaaactctcctgacacttagctctatca 52338291  T
Q  121 taatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagacaccgactttt 218  Q
    |||||||||| ||||||||||||| |||| |||        ||||| |||||| ||||||| |||| ||||||||||||| |||||||||||||||||||    
T  52338290 taatctacaggaaaattcaagttttaaccgcccaaaaa---tcgatctccaaaacctcacacaatcacttatttgcaaaa-cgtttagacaccgactttt 52338195  T
Q  219 caagcgaaaatcccaattttcatc 242  Q
    ||| ||||||||||||||| ||||    
T  52338194 caaacgaaaatcccaatttccatc 52338171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 10550908 - 10551142
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||| | ||||||||||||| | ||||||| |||| ||||||| |||||||| ||||||||| ||| |  | |||| || ||||||    
T  10550908 gacagcatcagattttcacccttcacgttttcgcgcctaaaaataaaaccgttaatccgttttcgatgccgttttcgcctacgcgctcctaacacttagc 10551007  T
Q  114 cctatcataatctacagaaaat-tcaagtttcaaccacccnnnnnnnntcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagacacc 211  Q
     |||||| ||| |||| ||||  || ||||||||||||||        ||| |||||||| |||||||||||| || |||||||||||| ||||||||||    
T  10551008 tctatcacaatatacaaaaaaaatccagtttcaaccacccaaaaa---tcggtttccaaaacctcacataatcactcatttgcaaaaacatttagacacc 10551104  T
Q  212 gacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  10551105 gactcttcaagcgaaaatcccaattttcatcaatccaa 10551142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 82 - 249
Target Start/End: Complemental strand, 9511296 - 9511130
Alignment:
Q  82 ccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacat 180  Q
    |||||||| ||| || | ||||||| |||||| ||||||||||||||||||| ||||||| ||||||| ||        ||  ||||| |||| ||||||    
T  9511296 ccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaatttcaagtctcaaccatcccaagaa--tcattttcccaaacgtcacat 9511199  T
Q  181 aatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9511198 aatcctttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 9511130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 82 - 249
Target Start/End: Complemental strand, 9519271 - 9519105
Alignment:
Q  82 ccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacat 180  Q
    |||||||| ||| || | ||||||| |||||| ||||||||||||||||||| ||||||| ||||||| ||        ||  ||||| |||| ||||||    
T  9519271 ccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaatttcaagtctcaaccatcccaagaa--tcattttcccaaacgtcacat 9519174  T
Q  181 aatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9519173 aatcctttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 9519105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 72 - 242
Target Start/End: Complemental strand, 52212817 - 52212648
Alignment:
Q  72 gttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgattt-cc 169  Q
    |||||||| |||||||||| || |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||        ||||||| ||    
T  52212817 gttttcgatgccgttttcatctacatgttcctgacacttagccctatcataatctacagaaagattcaagtttcaaccaccc---caaaatcgatttccc 52212721  T
Q  170 aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatc 242  Q
    || |||||||||||| |||||||||||||| ||||| || ||||||||||||||| |||| ||||||| ||||    
T  52212720 aagcctcacataatctcttatttgcaaaaatgtttacactccgacttttcaagcgtaaattccaatttccatc 52212648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 11061823 - 11061694
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||| |||||||||||| ||||||| |||| ||||||    
T  11061823 gacagcatcagattttcaacattcacgttttcgcgcataaaaatcaaaccgttaatccgttttcgacaccgttttcacctacatgttcatgacacttagc 11061724  T
Q  114 cctatcataatctacag-aaaattcaagtt 142  Q
     ||||| |||| ||||| ||||||||||||    
T  11061723 tctatcttaatgtacagaaaaattcaagtt 11061694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 21618986 - 21619220
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||| | ||||||||||||| | |||||||||||| ||||| | |||||||| ||||||||| ||| |  | ||||||| |||| |    
T  21618986 gacagcatcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacacttaac 21619085  T
Q  114 cctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacacc 211  Q
     |||||| ||||||||| ||||||  ||||||||||||||        ||| ||||| |||||||||||||||||| |||||| ||||| ||||||||||    
T  21619086 tctatcacaatctacagaaaaattacagtttcaaccaccc---aaaaatcggtttccaaaacctcacataatccctcatttgccaaaacatttagacacc 21619182  T
Q  212 gacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    | || ||||||| |||||| ||||||||||||| ||||    
T  21619183 gtctcttcaagcaaaaatctcaattttcatcaatccaa 21619220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 17547914 - 17547681
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  ||||||||||||| | |||||  ||||| ||||| |  ||||||| | ||||||| ||| || | ||||||| |||||    
T  17547914 gacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacccattttcgatgtcgttttcgcctacacgctcctgacacttag 17547815  T
Q  113 ccctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagacac 210  Q
    || |||||| |||||||||||| ||||||||||||||||||        |||||||||||| |||||||||||| ||||||||||||  |||||||||||    
T  17547814 ccttatcattatctacagaaaaattcaagtttcaaccacccaaaaa---tcgatttccaaaacctcacataatcgcttatttgcaaa--cgtttagacac 17547720  T
Q  211 cgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
     ||||||||||| |||||||||||||| ||| |||||||    
T  17547719 tgacttttcaagggaaaatcccaatttccattaacccaa 17547681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 152
Target Start/End: Original strand, 17100085 - 17100224
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||||| ||||||||||||| |||||||||||| | ||||||| |||||||| ||||||||||||| | ||||| |||| ||||||    
T  17100085 gacaacatcagattttcaaccttcacgttttcgcgcataaaaatcaatccgttaatccgttttcgatgccgttttcacctacgtgttcatgacacttagc 17100184  T
Q  114 cctatcataatctacag-aaaattcaagtttcaaccaccc 152  Q
     ||||| |||| ||||| ||||||||||||||||| ||||    
T  17100185 tctatcttaatgtacagaaaaattcaagtttcaacaaccc 17100224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 170 - 245
Target Start/End: Original strand, 37038808 - 37038883
Alignment:
Q  170 aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaac 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  37038808 aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatctcaattttcatcaac 37038883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 11882860 - 11882726
Alignment:
Q  19 catcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctat 118  Q
    ||||| ||||||||| ||||||||||||| |||||||||||||| |||||||||||||| | ||||||||||||| | |||||||||| |||| ||||||    
T  11882860 catcatattttcaaccttcacgttttcgcgcataaaaatcaaaccgttaatctgttttcaatgccgttttcacctacttgttcctgacacttacccctat 11882761  T
Q  119 cataatctacag-aaaattcaagtttcaaccaccc 152  Q
    ||||||  |||| ||||||||||||| ||| ||||    
T  11882760 cataatgcacagaaaaattcaagttttaacaaccc 11882726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 35 - 239
Target Start/End: Original strand, 20188353 - 20188554
Alignment:
Q  35 ttcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaa 134  Q
    ||||||||||||| | |||||  |||||  |||| | |||||||| ||||||||| ||| |  ||||||||| |||||| ||||||||||||||||||||    
T  20188353 ttcacgttttcgcgcgtaaaatccaaaccattaacccgttttcgatgccgttttcgcctacgcgttcctgacacttagctctatcataatctacagaaaa 20188452  T
Q  135 -ttcaagttt-caaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcc 231  Q
     ||||||||| |||||||||        |||||||||| ||||||||||| ||   | |||||||||||||||||||||||| |||||||||||||||||    
T  20188453 attcaagttttcaaccaccccaaac---tcgatttccagaacctcacatactc---tgtttgcaaaaacgtttagacaccgagttttcaagcgaaaatcc 20188546  T
Q  232 caattttc 239  Q
    ||||||||    
T  20188547 caattttc 20188554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 230
Target Start/End: Original strand, 15517258 - 15517473
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  ||||||||||||| | |||||  ||||| ||||| | ||||| || ||||||||| ||| || | |||| ||||||||    
T  15517258 gacaacatcagattttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgtttttgatgccgttttcgcctacacgctcctaactcttag 15517357  T
Q  113 ccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcga-tttccaaacctcacataatcccttatttgcaaaaacgtttagacac 210  Q
    | |||||||||||||||| ||||||||||||||||| ||||        || | |||| ||||||||||||||| ||||||||| |||||||||||||||    
T  15517358 ctctatcataatctacagaaaaattcaagtttcaactaccc---aaaaatcaattttcaaaacctcacataatcacttatttgc-aaaacgtttagacac 15517453  T
Q  211 cgacttttcaagcgaaaatc 230  Q
     |||||||||||||||||||    
T  15517454 tgacttttcaagcgaaaatc 15517473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 19568503 - 19568421
Alignment:
Q  168 ccaaacctcacataatcccttattt-gcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    |||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19568503 ccaaacctcggataatcccttattttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 19568421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 13327182 - 13327077
Alignment:
Q  19 catcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctat 118  Q
    ||||| ||||||||| ||||||||||||| |||||||||||||| ||||| |||||||||| ||||||||||||| | |||||||||| ||||| |||||    
T  13327182 catcaaattttcaaccttcacgttttcgcacataaaaatcaaaccgttaaactgttttcgatgccgttttcacctacttgttcctgacacttagacctat 13327083  T
Q  119 cataat 124  Q
    ||||||    
T  13327082 cataat 13327077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 169 - 245
Target Start/End: Complemental strand, 42324265 - 42324189
Alignment:
Q  169 caaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaac 245  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  42324265 caaacctcacataattccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatctcaatcttcatcaac 42324189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 20417764 - 20417864
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| |||||||||| |||| ||||||||||||| |||||||||||||| |||||||| ||||||| ||||||||||||| |||||||||||| ||||||    
T  20417764 gacaacatcagattt-caaccttcacgttttcgcgcataaaaatcaaactgttaatctattttcgatgccgttttcacctacatgttcctgacacttagc 20417862  T
Q  114 cc 115  Q
    ||    
T  20417863 cc 20417864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 238
Target Start/End: Complemental strand, 11850039 - 11849818
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  ||||||||||||| | ||| |  ||||| ||||| | ||||||||  |||||||| ||| |  | | ||||| |||||    
T  11850039 gacaacatcagattttctaattttcacgttttcgcgcgtaagatccaaaccgttaacccgttttcgataccgttttcgcctacgcgcttctgacacttag 11849940  T
Q  113 ccctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacac 210  Q
    | |||||||||||||||||||| ||||||||||||||||||        |||||||||| |||||| |||| ||   | |||||||||||||||||||||    
T  11849939 ctctatcataatctacagaaaaattcaagtttcaaccacccaaaac---tcgatttccagaacctcgcatactc---tgtttgcaaaaacgtttagacac 11849846  T
Q  211 cgacttttcaagcgaaaatcccaatttt 238  Q
    ||| ||||||||||||||||||||||||    
T  11849845 cgagttttcaagcgaaaatcccaatttt 11849818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 2843651 - 2843758
Alignment:
Q  39 cgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattca 138  Q
    ||||||||| ||||||||||||||  |||||| |||||||| ||||||||||||| | ||||| |||| |||| ||||||| |||| |||||||||||||    
T  2843651 cgttttcgcgcataaaaatcaaaccattaatccgttttcgatgccgttttcacctacgtgttcatgacacttaaccctatcttaatgtacagaaaattca 2843750  T
Q  139 agtttcaa 146  Q
    ||||||||    
T  2843751 agtttcaa 2843758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 83 - 239
Target Start/End: Complemental strand, 13667460 - 13667306
Alignment:
Q  83 cgttttcacctgcatgttcctgactcttagccctatcataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacat 180  Q
    ||||||| ||| || | ||||||| |||| | ||||||||||||||||||| | ||||||||||||||||         ||||||||| ||||||| |||    
T  13667460 cgttttcgcctacacgctcctgacacttaactctatcataatctacagaaagactcaagtttcaaccacc---taaaaatcgatttcccaaacctcgcat 13667364  T
Q  181 aatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttc 239  Q
    |||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  13667363 aatctcttatttgcaaaa-cgtttagacaccgagttttcaagcgaaaatcccaattttc 13667306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 51961783 - 51961663
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||||| |  |||||||||| |||||||||||||| ||||||| ||||||||||||||||||||   |||| |||| ||||||| |    
T  51961783 gacaacatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgacgccgttttcactcacatgctcctaactcttaac 51961684  T
Q  114 cctatcataatctacagaaaa 134  Q
     ||||||||||  ||||||||    
T  51961683 actatcataatgcacagaaaa 51961663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 53770473 - 53770593
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||||| |  |||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| || ||||||    
T  53770473 gacaacatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttagc 53770572  T
Q  114 cctatcataatctacagaaaa 134  Q
     ||||||||||  ||||||||    
T  53770573 actatcataatgcacagaaaa 53770593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 149
Target Start/End: Original strand, 18910610 - 18910721
Alignment:
Q  38 acgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattc 137  Q
    |||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| || ||| || ||||||||||||||| ||| |||    
T  18910610 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataatctacaaaaatttc 18910709  T
Q  138 aagtttcaacca 149  Q
    | ||||||||||    
T  18910710 atgtttcaacca 18910721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 147
Target Start/End: Original strand, 23491806 - 23491941
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  ||||||||||||| | |||||| ||||| ||||||| |||||||  ||||||||||||| | ||||| |||| |||||    
T  23491806 gacaacatcagattttccaattttcacgttttcgcgcgtaaaaaccaaaccgttaatccgttttcggtgccgttttcacctacttgttcatgacacttag 23491905  T
Q  113 ccctatcataatctacag-aaaattcaagtttcaac 147  Q
    ||||||| |||| ||||| |||||||||||||||||    
T  23491906 ccctatcttaatgtacagaaaaattcaagtttcaac 23491941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 152
Target Start/End: Original strand, 54423453 - 54423584
Alignment:
Q  22 cagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcat 121  Q
    |||||||||||| ||||| ||||||| |||||||||| ||  ||||||| |||||||| | ||||||||||| | ||||| |||| ||||||||||||      
T  54423453 cagattttcaaccttcacattttcgcgcataaaaatcgaattgttaatccgttttcgatgtcgttttcacctacgtgttcatgacacttagccctatctg 54423552  T
Q  122 aatctacag-aaaattcaagtttcaaccaccc 152  Q
    ||| ||||| ||||||||||||||||| ||||    
T  54423553 aatgtacagaaaaattcaagtttcaacaaccc 54423584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 168 - 249
Target Start/End: Original strand, 17513588 - 17513668
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||| |||||||| || ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  17513588 ccaaaactcacatagtctcttatttgcaaaa-cgtttagacaccgacttttcaagggaaaatcccaattttcattaacccaa 17513668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 152
Target Start/End: Complemental strand, 23395460 - 23395320
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  ||||||||||||| | |||||  ||||| ||||| | |||||||| ||||||||| ||| || | ||||||| |||||    
T  23395460 gacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaactgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttag 23395361  T
Q  113 ccctatcataatctacagaaa-attcaagtttcaaccaccc 152  Q
    | ||||||||||||||| ||| |||||||||||||||||||    
T  23395360 ctctatcataatctacaaaaagattcaagtttcaaccaccc 23395320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 147
Target Start/End: Original strand, 38167343 - 38167478
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  ||||||||||||| | |||||| ||||| ||||| | |||||||| ||||||||||||| ||   ||||||| |||||    
T  38167343 gacaacatcagattttccaattttcacgttttcgcgcgtaaaaaccaaaccgttaacccgttttcgatgccgttttcacctacacactcctgacacttag 38167442  T
Q  113 ccctatcataatctacag-aaaattcaagtttcaac 147  Q
    ||||||| |||| ||||| |||||||||||||||||    
T  38167443 ccctatcttaatgtacagaaaaattcaagtttcaac 38167478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 16260894 - 16261014
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||||| |  |||||||||| |||||||||||||  ||||||| |||||||| ||| ||||||||| |||| |||| ||  |||||    
T  16260894 gacaacatcagattttcaacttctacgttttcgcgcataaaaatcaaatcgttaatccgttttcgatgccattttcacctacatgctcctaacaattagc 16260993  T
Q  114 cctatcataatctacagaaaa 134  Q
     ||||||||||  ||||||||    
T  16260994 actatcataatgcacagaaaa 16261014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 3394045 - 3393964
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||||||||| ||| ||||||||||||||||||| | ||||||||||||  |||| ||||||| |||| ||||||    
T  3394045 ccaaacctcacataatctcttgtttgcaaaaacgtttagactctgacttttcaagcataaattccaatttccatcgacccaa 3393964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 178773 - 178720
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaa 221  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||| |||||    
T  178773 ccaaacctcacataatctcttatttgcaaaaacgtttagactccgactcttcaa 178720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 147
Target Start/End: Original strand, 3991999 - 3992119
Alignment:
Q  28 ttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatcta 127  Q
    |||||| ||||| ||||||| ||||| |||||||| ||||||| |||| ||| ||||||||||||| | | ||| |||| ||||||||||||  | | ||    
T  3991999 ttcaactttcacattttcgcgcataataatcaaaccgttaatccgtttccgatgccgttttcacctacgttttcatgacacttagccctatctcagtgta 3992098  T
Q  128 cag-aaaattcaagtttcaac 147  Q
     || |||||||||||||||||    
T  3992099 aagaaaaattcaagtttcaac 3992119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 18366805 - 18366752
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaa 221  Q
    ||||||||||||||||| | | ||||||||||||||||||| ||||||||||||    
T  18366805 ccaaacctcacataatctcatgtttgcaaaaacgtttagactccgacttttcaa 18366752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 13968243 - 13968123
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| |||||||||||| || ||||||||||||| | |||||| | ||| ||||| | |||||||| ||||||||| ||| || | || |||  | ||||    
T  13968243 gacagcatcagattttcgaccttcacgttttcgcgcgtaaaaacccaaccgttaacccgttttcgatgccgttttcgcctacacgctcatgagacatagc 13968144  T
Q  114 cctatcataatctacagaaaa 134  Q
     |||||||||||||| |||||    
T  13968143 tctatcataatctaccgaaaa 13968123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 13973718 - 13973598
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| |||||||||||| || ||||||||||||| | |||||| | ||| ||||| | |||||||| ||||||||| ||| || | || |||  | ||||    
T  13973718 gacagcatcagattttcgaccttcacgttttcgcgcgtaaaaacccaaccgttaacccgttttcgatgccgttttcgcctacacgctcatgagacatagc 13973619  T
Q  114 cctatcataatctacagaaaa 134  Q
     |||||||||||||| |||||    
T  13973618 tctatcataatctaccgaaaa 13973598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 12276556 - 12276611
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagc 223  Q
    |||||||||| |||||| ||| ||||||||||||||||||| |||| |||||||||    
T  12276556 ccaaacctcagataatctcttgtttgcaaaaacgtttagactccgatttttcaagc 12276611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 149
Target Start/End: Complemental strand, 40039532 - 40039425
Alignment:
Q  42 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 141  Q
    |||||| ||||||| |||||| |||||||   ||| || |||| |||| ||  || | ||||||| |||||| ||||||||||||||||||| |||||||    
T  40039532 tttcgcgcataaaattcaaaccgttaatcaaattttgatgccgctttcgcccacacgctcctgacacttagctctatcataatctacagaaatttcaagt 40039433  T
Q  142 ttcaacca 149  Q
    || |||||    
T  40039432 ttaaacca 40039425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 149
Target Start/End: Complemental strand, 50351239 - 50351132
Alignment:
Q  42 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 141  Q
    |||||| | ||||| |||||| ||||||| | ||| || | ||||||| ||| || | ||||||| |||| | ||||||||||||||||||| |||||||    
T  50351239 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgtcgttttcgcctacacggtcctgacacttaactctatcataatctacagaaatttcaagt 50351140  T
Q  142 ttcaacca 149  Q
     |||||||    
T  50351139 ctcaacca 50351132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 237
Target Start/End: Complemental strand, 13029452 - 13029384
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattt 237  Q
    ||||||||||||||||| ||||||||| |||||||||| ||  ||||||||||| ||||||  |||||||    
T  13029452 ccaaacctcacataatctcttatttgc-aaaacgtttatacttcgacttttcaaacgaaaactccaattt 13029384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 149
Target Start/End: Complemental strand, 17758800 - 17758759
Alignment:
Q  108 cttagccctatcataatctacagaaaattcaagtttcaacca 149  Q
    |||||| ||||||||||||||||||| |||||||||||||||    
T  17758800 cttagctctatcataatctacagaaatttcaagtttcaacca 17758759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 149
Target Start/End: Complemental strand, 19060120 - 19060079
Alignment:
Q  108 cttagccctatcataatctacagaaaattcaagtttcaacca 149  Q
    |||||| ||||||||||||||||||| |||||||||||||||    
T  19060120 cttagctctatcataatctacagaaatttcaagtttcaacca 19060079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 149
Target Start/End: Complemental strand, 16934612 - 16934513
Alignment:
Q  50 ataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagtttcaacca 149  Q
    |||||| |||||| ||||||| | ||| |||||||||||| ||| || | ||||||| |||  | ||| ||||||||||| ||| |||| ||||||||||    
T  16934612 ataaaattcaaaccgttaatcggattttgacgccgttttcgcctacacgctcctgacacttgactctaacataatctacaaaaatttcatgtttcaacca 16934513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 237
Target Start/End: Complemental strand, 13025860 - 13025792
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattt 237  Q
    |||||||||| |||||| ||||||||| |||||||||| ||  ||||||||||| ||||||  |||||||    
T  13025860 ccaaacctcaaataatctcttatttgc-aaaacgtttatacttcgacttttcaaacgaaaactccaattt 13025792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 52212843 - 52212811
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcg 46  Q
    |||||||||||||||||||| ||||||||||||    
T  52212843 gacatcatcagattttcaaccttcacgttttcg 52212811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2046 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold2046
Description:

Target: scaffold2046; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 19 - 249
Target Start/End: Original strand, 801 - 1028
Alignment:
Q  19 catcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctat 118  Q
    ||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||| ||| ||||||||| |||| ||||||| |||||||||||    
T  801 catcagattttcaaccttcacgttttcgcgcataaaaatcaaactgttaatctgttttcgatgcc-ttttcacctacatgctcctgacacttagccctat 899  T
Q  119 cataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgatttccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttt 217  Q
    ||||||||||||||| |||||||||||||||||||        |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  900 cataatctacagaaagattcaagtttcaaccaccc---aaaaatcgatttccaaacctcacataatctcttatttgcaaaaacgtttagacaccgacttt 996  T
Q  218 tcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||| |||||||||||||| |||| ||||||    
T  997 tcaagtgaaaatcccaatttccatcgacccaa 1028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 143; Significance: 3e-75; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 19 - 249
Target Start/End: Complemental strand, 13750715 - 13750488
Alignment:
Q  19 catcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctat 118  Q
    ||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||| ||| ||||||||| |||| ||||||| |||||||||||    
T  13750715 catcagattttcaaccttcacgttttcgcgcataaaaatcaaactgttaatctgttttcgatgcc-ttttcacctacatgctcctgacacttagccctat 13750617  T
Q  119 cataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgatttccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttt 217  Q
    ||||||||||||||| |||||||||||||||||||        |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13750616 cataatctacagaaagattcaagtttcaaccaccc---aaaaatcgatttccaaacctcacataatctcttatttgcaaaaacgtttagacaccgacttt 13750520  T
Q  218 tcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||| |||||||||||||| |||| ||||||    
T  13750519 tcaagtgaaaatcccaatttccatcgacccaa 13750488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 21 - 249
Target Start/End: Complemental strand, 18259612 - 18259386
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    ||||||||||||| ||||||||||||| ||||| |||||||| ||||| | |||||||| ||||||||  |||  | | ||||||| |||||| ||||||    
T  18259612 tcagattttcaaccttcacgttttcgcacataataatcaaaccgttaacccgttttcgatgccgtttttgcctaaacgctcctgacacttagctctatca 18259513  T
Q  121 taatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccgactttt 218  Q
    |||||||||| ||||||||||||||||||||||        ||||||||| ||||||||||||||| ||||||||| |||||||| | ||||||||||||    
T  18259512 taatctacagaaaaattcaagtttcaaccaccc---aaaaatcgatttccaaaacctcacataatcacttatttgc-aaaacgttcaaacaccgactttt 18259417  T
Q  219 caagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||||||||||||||| |||||||    
T  18259416 caagcgaaaatcccaattttcattaacccaa 18259386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 21 - 249
Target Start/End: Complemental strand, 8227169 - 8226943
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    ||||||||||||| |||||||||||||||||||||| ||||| ||||| | |||||||| ||||||||| |||  | | ||||||| |||||||||||||    
T  8227169 tcagattttcaaccttcacgttttcgctcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgacacttagccctatca 8227070  T
Q  121 taatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccgactttt 218  Q
    ||||||| || ||||||||||||| ||||||||        ||| ||||| ||||||||||||||| ||||||||| |||||||||||||||||| | ||    
T  8227069 taatctatagaaaaattcaagtttaaaccaccc---aaaaatcggtttccaaaacctcacataatcacttatttgc-aaaacgtttagacaccgaatctt 8226974  T
Q  219 caagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||| ||| |||||||||||||||    
T  8226973 caagcgaaaattccagttttcatcaacccaa 8226943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 57 - 249
Target Start/End: Original strand, 28948221 - 28948412
Alignment:
Q  57 tcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagtttcaaccacccnnnn 156  Q
    |||||| ||||||| | ||| || ||||||||| |||  ||| ||||||| ||| || ||||||||||||||||||| ||||||||||||||| ||        
T  28948221 tcaaaccgttaatcggattttgatgccgttttcgcctatatgctcctgacacttggctctatcataatctacagaaatttcaagtttcaaccatcccaag 28948320  T
Q  157 nnnntcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
        ||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  28948321 aa--tcattttccaaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcaaaaattccaattttcatcaacccaa 28948412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 19 - 236
Target Start/End: Original strand, 24267455 - 24267671
Alignment:
Q  19 catcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagcccta 117  Q
    |||||||||||| ||  ||||||||||||| | |||||  ||||| ||||| | |||||||| ||||||||| ||| || | ||||||| |||||| |||    
T  24267455 catcagattttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagctcta 24267554  T
Q  118 tcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgact 215  Q
    ||||||||||||| ||||||||||||||||||| ||        ||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  24267555 tcataatctacagaaaaattcaagtttcaaccagcc---aaacatcgatttcccaaacctcacataatctcttatttgc-aaaacgtttagacaccgact 24267650  T
Q  216 tttcaagcgaaaatcccaatt 236  Q
    |||||| ||||||||||||||    
T  24267651 tttcaaacgaaaatcccaatt 24267671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 5110158 - 5109924
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  ||||||||||||| | |||||  ||||| ||||| | |||||||| ||||||||| ||| || | ||||||| |||||    
T  5110158 gacaacatcagattttctaatcttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttag 5110059  T
Q  113 ccctatcataatctacagaaaat-tcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacac 210  Q
    | ||||||||||||||||||||  |||||||||||||| ||        ||||||||| ||||||||||||||  ||||||||||||| |||||||||||    
T  5110058 ctctatcataatctacagaaaaactcaagtttcaaccaaccaaaaa---tcgatttcccaaacctcacataatatcttatttgcaaaa-cgtttagacac 5109963  T
Q  211 cgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||| ||||||| ||||||||||||||| |||||||||||    
T  5109962 cgatttttcaaacgaaaatcccaatttccatcaacccaa 5109924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 21 - 249
Target Start/End: Complemental strand, 23532325 - 23532099
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    ||||||||||||| |||||||||||||||||||||| ||||| ||||| | |||||||| ||||||||| |||  | |  |||||| |||||||||||||    
T  23532325 tcagattttcaaccttcacgttttcgctcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacgcacctgacacttagccctatca 23532226  T
Q  121 taatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccgactttt 218  Q
    ||||||| || |||| |||||||| ||||||||        ||| ||||| |||| |||||||||| ||||||||| |||||||||||||||||| | ||    
T  23532225 taatctatagaaaaaatcaagtttaaaccaccc---aaaaatcggtttccaaaacttcacataatcacttatttgc-aaaacgtttagacaccgaatctt 23532130  T
Q  219 caagcgaaaatcccaattttcatcaacccaa 249  Q
    |||| |||||||||| ||| |||||||||||    
T  23532129 caagtgaaaatcccagtttccatcaacccaa 23532099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 16448220 - 16447986
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||| | ||||||||||||| | |||||||||||| ||||| | |||||||| ||||||||||||| |  | ||||||| | ||||    
T  16448220 gacagcatcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaaccagttttcgatgccgttttcacctacgcgctcctgacacatagc 16448121  T
Q  114 cctatcataatctacagaaaattca-agtttcaaccacccnnnnnnnntcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagacacc 211  Q
     |||||| || ||| |||||| | | ||||||||||||||        |||||||||||| |||||||||||| || |||||||||||| ||||||||||    
T  16448120 tctatcacaaactaaagaaaaattacagtttcaaccacccaaaaa---tcgatttccaaaacctcacataatcactcatttgcaaaaacatttagacacc 16448024  T
Q  212 gacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    |||| ||||||||||||||| |||| ||||||| ||||    
T  16448023 gactcttcaagcgaaaatccaaattatcatcaaaccaa 16447986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 55 - 242
Target Start/End: Original strand, 24441306 - 24441491
Alignment:
Q  55 aatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaa-attcaagtttcaaccacccn 153  Q
    |||||||| ||||| | |||||||| ||||||||  ||| || | ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||     
T  24441306 aatcaaaccgttaacccgttttcgatgccgtttttgcctacacgctcctgacacttagccctatcataatctacaaaaatattcaagtttcaaccaccca 24441405  T
Q  154 nnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatc 242  Q
           ||||||||| ||||| ||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  24441406 aaaa---tcgatttcccaaaccccacataatctcttatttgcaaaa-cgtttagacaccgacttttcaaacgaaaatcccaatttccatc 24441491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 19 - 249
Target Start/End: Complemental strand, 29415997 - 29415766
Alignment:
Q  19 catcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagcccta 117  Q
    |||||||||||| ||  ||||||||||||| |||||||  ||||| ||||| |  ||||||| | ||||||| ||| || | ||||||| |||||| |||    
T  29415997 catcagattttctaattttcacgttttcgcgcataaaatccaaaccgttaacccattttcgatgtcgttttcgcctacacgctcctgacacttagctcta 29415898  T
Q  118 tcataatctacagaaaa---ttcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccga 213  Q
    |||||||||||||||||   ||||||||||||||||||        | ||||||| ||||||||||||||| ||||||||||||| ||||||||||||||    
T  29415897 tcataatctacagaaaaagattcaagtttcaaccacccaaaaa---ttgatttcccaaacctcacataatctcttatttgcaaaa-cgtttagacaccga 29415802  T
Q  214 cttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
     ||||||| |||||||| |||||| |||||||||||    
T  29415801 tttttcaaacgaaaatcgcaatttccatcaacccaa 29415766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 25650672 - 25650806
Alignment:
Q  19 catcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctat 118  Q
    ||||||||||||| | ||||||||||||| |||||||||||||| ||||||||  |||||| ||||||||||||| |||||||||||| ||||||| |||    
T  25650672 catcagattttcatccttcacgttttcgcgcataaaaatcaaactgttaatctaatttcgatgccgttttcacctacatgttcctgacacttagccttat 25650771  T
Q  119 cataatctacag-aaaattcaagtttcaaccaccc 152  Q
    | |||| ||||| ||||||||||||||||| ||||    
T  25650772 cttaatgtacagaaaaattcaagtttcaacaaccc 25650806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 100 - 232
Target Start/End: Complemental strand, 31468137 - 31468006
Alignment:
Q  100 tcctgactcttagccctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaa 197  Q
    ||||||| |||| | |||||||||||||||||||| ||||||||||||||||||        |||||||||| |||||||||||||| ||||||||||||    
T  31468137 tcctgacacttaactctatcataatctacagaaaaattcaagtttcaaccacccaaaaa---tcgatttccagaacctcacataatcacttatttgcaaa 31468041  T
Q  198 aacgtttagacaccgacttttcaagcgaaaatccc 232  Q
    |||||||||||||||||||||||||||||||||||    
T  31468040 aacgtttagacaccgacttttcaagcgaaaatccc 31468006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 147
Target Start/End: Original strand, 18776609 - 18776722
Alignment:
Q  35 ttcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacag-aaa 133  Q
    ||||||||||| | |||||||||||||| |||||||||||||||| ||||||||||||| | ||||| |||| |||||||||||| |||| ||||| |||    
T  18776609 ttcacgttttcacgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacgtgttcatgacacttagccctatcttaatgtacagaaaa 18776708  T
Q  134 attcaagtttcaac 147  Q
    ||||||||||||||    
T  18776709 attcaagtttcaac 18776722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 239
Target Start/End: Complemental strand, 5289517 - 5289298
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  ||||||||||||| | |||||  ||||| ||||| | |||||||| ||||||||| ||| |    ||||||| |||||    
T  5289517 gacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgccgttttcgcctacgcactcctgacacttag 5289418  T
Q  113 ccctatcataatctacagaaaattcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacacc 211  Q
    | ||||||||||||||||  ||||||||||||||||||||        |||||||||| |||||| |||| ||   | ||||||||||||||||||||||    
T  5289417 ctctatcataatctacag--aattcaagtttcaaccaccc---aaaactcgatttccagaacctcgcatactc---tgtttgcaaaaacgtttagacacc 5289326  T
Q  212 gacttttcaagcgaaaatcccaattttc 239  Q
    || ||||||||||||||||| |||||||    
T  5289325 gagttttcaagcgaaaatccaaattttc 5289298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 18003316 - 18003196
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||||| |  |||||||||| |||||||||||||| ||||||  |||||||| ||||||||||||| |||| |||| || ||||||    
T  18003316 gacagcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaattcgttttcgatgccgttttcacctacatgctccttacacttagc 18003217  T
Q  114 cctatcataatctacagaaaa 134  Q
     ||||||||||  ||||||||    
T  18003216 actatcataatgcacagaaaa 18003196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 168 - 244
Target Start/End: Original strand, 20177753 - 20177829
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaa 244  Q
    |||||||||||||||||||||||||||||||||||| | || | |||||||||||||||||||||||||| ||||||    
T  20177753 ccaaacctcacataatcccttatttgcaaaaacgttcaaactctgacttttcaagcgaaaatcccaatttccatcaa 20177829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 168 - 244
Target Start/End: Complemental strand, 22158238 - 22158162
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaa 244  Q
    |||||||||||||||||||||||||||||||||||| | || | |||||||||||||||||||||||||| ||||||    
T  22158238 ccaaacctcacataatcccttatttgcaaaaacgttcaaactctgacttttcaagcgaaaatcccaatttccatcaa 22158162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 23994355 - 23994475
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||||| |  |||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| || ||||||    
T  23994355 gacaacatcagattttcaacttctacgttttcgcgcataaaaatcaaactgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttagc 23994454  T
Q  114 cctatcataatctacagaaaa 134  Q
     ||||||||||  ||||||||    
T  23994455 actatcataatgcacagaaaa 23994475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 149
Target Start/End: Original strand, 16231509 - 16231620
Alignment:
Q  38 acgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattc 137  Q
    |||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| || ||| || ||||||||||||||| ||| |||    
T  16231509 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataatctacaaaaatttc 16231608  T
Q  138 aagtttcaacca 149  Q
    | ||||||||||    
T  16231609 atgtttcaacca 16231620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 245
Target Start/End: Original strand, 25753198 - 25753273
Alignment:
Q  170 aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaac 245  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| ||| |||||||||    
T  25753198 aaacctcacataatcccttatttgcaaaaacgtttagacaccaacttttcgaacgaaaatcctaatcttcatcaac 25753273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 245
Target Start/End: Original strand, 25755368 - 25755443
Alignment:
Q  170 aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaac 245  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| ||| |||||||||    
T  25755368 aaacctcacataatcccttatttgcaaaaacgtttagacaccaacttttcgaacgaaaatcctaatcttcatcaac 25755443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 149
Target Start/End: Complemental strand, 18087461 - 18087350
Alignment:
Q  38 acgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattc 137  Q
    |||||||||| |||||||||||||| ||||||| |||||||| || |||||| ||| |||| |||| || ||| || ||||||||||||||| ||| |||    
T  18087461 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgcagttttcgcctacatgctcctaacacttggcactatcataatctacaaaaatttc 18087362  T
Q  138 aagtttcaacca 149  Q
    | ||||||||||    
T  18087361 atgtttcaacca 18087350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 170 - 244
Target Start/End: Complemental strand, 19102773 - 19102699
Alignment:
Q  170 aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaa 244  Q
    ||||||||||||||| || |||||||||||| |||||||||  ||| ||||||||||||||||||||||||||||    
T  19102773 aaacctcacataatcactcatttgcaaaaacatttagacacttactcttcaagcgaaaatcccaattttcatcaa 19102699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 13621456 - 13621336
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||||| |  || |||| || |||||||||||||| ||||||| |||||||| ||||||||||||| |||| |||| ||  |||||    
T  13621456 gacagcatcagattttcaacttctacatttttgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacatgctcctaacaattagc 13621357  T
Q  114 cctatcataatctacagaaaa 134  Q
     ||||||||||  ||||||||    
T  13621356 actatcataatgcacagaaaa 13621336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 149
Target Start/End: Original strand, 23977386 - 23977497
Alignment:
Q  38 acgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattc 137  Q
    |||||||||| |||||||||||||| ||||||| |||||||| ||||||| | ||| |||| |||| || ||| || |||||||||| |||| ||| |||    
T  23977386 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgtttccgcctacatgctcctaacacttggcactatcataatttacaaaaatttc 23977485  T
Q  138 aagtttcaacca 149  Q
    | ||||||||||    
T  23977486 atgtttcaacca 23977497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 16132716 - 16132635
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||  |||| |||| || |||| ||||||    
T  16132716 ccaaacctcacataatctcttgtttgcaaaaacgtttagactccgacttttcaagcttaaattccaacttccatcgacccaa 16132635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 249
Target Start/End: Original strand, 18659196 - 18659275
Alignment:
Q  170 aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||  ||||  ||| || |||||||||||    
T  18659196 aaacctcacataatctcttgtttgcaaaaacgtttagactccgacttttcaagcataaatttcaacttccatcaacccaa 18659275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 232
Target Start/End: Original strand, 19174803 - 19174991
Alignment:
Q  42 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 141  Q
    |||||| ||||||| |||||  ||||| | |||||| | | ||||||| ||| |  | ||||||| |||| | ||||||||||||||| |||||||||||    
T  19174803 tttcgcgcataaaattcaaattgttaacccgttttcaatgtcgttttcgcctacgcgctcctgacacttaactctatcataatctacataaaattcaagt 19174902  T
Q  142 ttcaaccacccnnnnnnnntcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatccc 232  Q
    ||||| || ||        ||  |||||||| |||||||||||| ||||||||||||| || ||| |||||||||| |||| ||||||||||    
T  19174903 ttcaagcatcccaaaa---tcattttccaaaacctcacataatcgcttatttgcaaaagcgcttaaacaccgacttctcaaacgaaaatccc 19174991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 29847569 - 29847488
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||||||||| ||| |||||||||| |||||||| ||||||||||||||  |||  ||||||| |||| ||||||    
T  29847569 ccaaacctcacataatctcttgtttgcaaaaatgtttagactccgacttttcaagcataaactccaatttccatcgacccaa 29847488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 15735567 - 15735455
Alignment:
Q  22 cagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcat 121  Q
    ||||||||| |  ||||||||||||  | |||||||||||| ||||||| ||||| || ||||||||||||| |||| |||| ||  ||||| |||||||    
T  15735567 cagattttccaatttcacgttttcgtgcgtaaaaatcaaactgttaatccgtttttgatgccgttttcacctacatgctcctaacaattagcactatcat 15735468  T
Q  122 aatctacagaaaa 134  Q
    |||  ||||||||    
T  15735467 aatgcacagaaaa 15735455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 19443326 - 19443246
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||||||||| ||||||||| |||||||||| ||  ||||||||||| ||||||  ||||||| |||| ||||||    
T  19443326 ccaaacctcacataatctcttatttgc-aaaacgtttatacttcgacttttcaaacgaaaactccaatttccatcgacccaa 19443246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 24563048 - 24563168
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| |||||||||||| || ||||||||||||| | |||||| | ||| ||||| | |||||||| ||||||||| ||| || | || |||  | ||||    
T  24563048 gacagcatcagattttcgaccttcacgttttcgcgcgtaaaaacccaaccgttaacccgttttcgatgccgttttcgcctacacgctcatgagacatagc 24563147  T
Q  114 cctatcataatctacagaaaa 134  Q
     |||||||||||||| |||||    
T  24563148 tctatcataatctaccgaaaa 24563168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 16136053 - 16136115
Alignment:
Q  170 aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatccc 232  Q
    ||||||||||||||| |||||||||||||| | ||| |||||||||| |||  ||||||||||    
T  16136053 aaacctcacataatcgcttatttgcaaaaatgcttaaacaccgacttctcacacgaaaatccc 16136115  T

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Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 25348115 - 25348188
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcat 241  Q
    ||||| |||||||| || ||||||||||| ||||||||||| |||| |||||||||  |||  |||||||||||    
T  25348115 ccaaaactcacatagtctcttatttgcaagaacgtttagactccgaattttcaagcataaactccaattttcat 25348188  T

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Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 147
Target Start/End: Original strand, 26089191 - 26089304
Alignment:
Q  35 ttcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaa 134  Q
    |||||||||||||   |||||| ||||| ||||||| |||||||  || ||||||  || | ||||| |||| |||||||||||| |||| | |||||||    
T  26089191 ttcacgttttcgcatgtaaaaaccaaactgttaatccgttttcggtgctgttttcctctacttgttcatgacacttagccctatcttaatatgcagaaaa 26089290  T
Q  135 -ttcaagtttcaac 147  Q
     |||||||||||||    
T  26089291 tttcaagtttcaac 26089304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 147
Target Start/End: Original strand, 16135999 - 16136031
Alignment:
Q  115 ctatcataatctacagaaaattcaagtttcaac 147  Q
    ||||||||||||||| |||||||||||||||||    
T  16135999 ctatcataatctacataaaattcaagtttcaac 16136031  T

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Target: scaffold0037 (Bit Score: 133; Significance: 3e-69; HSPs: 4)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 113415 - 113181
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||| ||||||||| || |||||||||| ||||||| ||||||  ||||| ||||||||| ||||||||||||| ||||||||| || ||||||    
T  113415 gacaacatcaaattttcaacctttacgttttcgcgcataaaattcaaaccattaatttgttttcgatgccgttttcacctacatgttcctcacacttagc 113316  T
Q  114 cctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacacc 211  Q
    ||||||||||||||||| ||||||||||||||||||||||        |||||||||| ||| |||||||||| ||||||||||||||||||||||||||    
T  113315 cctatcataatctacagaaaaattcaagtttcaaccaccc---aaaaatcgatttccagaacatcacataatcacttatttgcaaaaacgtttagacacc 113219  T
Q  212 gacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||||||||||||||||||||||||||||||    
T  113218 gacttttcaagcgaaaatcccaattttcatcaacccaa 113181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 118249 - 118015
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||||| ||||| ||||||| ||||||||||| || |||||| ||||||||| | ||||||||||| ||||||||| || ||||||    
T  118249 gacaacatcagattttcaaccttcacattttcgcgcataaaaatcataccgttaatttgttttcgatgtcgttttcacctacatgttcctcacacttagc 118150  T
Q  114 cctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacacc 211  Q
    ||||||||||||||||| ||||||||||||||||||||||        ||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  118149 cctatcataatctacagaaaaattcaagtttcaaccaccc---aaaaatcgatttccaaaacctcacataatcacttatttgcaaaaacgtttagacacc 118053  T
Q  212 gacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    || | |||||||||||||| ||||||||||||||||||    
T  118052 gagtcttcaagcgaaaatctcaattttcatcaacccaa 118015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 119
Target Start/End: Complemental strand, 25505 - 25409
Alignment:
Q  23 agattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatc 119  Q
    ||||||||||| | ||||||||||| |||||||||||||| ||||||| |||||||| ||||||||||||| | ||||| |||  ||||||||||||    
T  25505 agattttcaacctccacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacgtgttcatgagacttagccctatc 25409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 147
Target Start/End: Original strand, 94407 - 94542
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  ||||| ||||||| |||||||| |||||  |||||| |||||||| ||||||||||||| | ||||| |||| |||||    
T  94407 gacaacatcagattttccaattttcacattttcgcgcataaaaaccaaacctttaatccgttttcgatgccgttttcacctacgtgttcatgacacttag 94506  T
Q  113 ccctatcataatctacag-aaaattcaagtttcaac 147  Q
    ||||||| |||| | ||| |||||||||||||||||    
T  94507 ccctatcttaatgtgcagcaaaattcaagtttcaac 94542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 133; Significance: 3e-69; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 19 - 249
Target Start/End: Original strand, 19358496 - 19358728
Alignment:
Q  19 catcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctat 118  Q
    |||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||| |  |||||||||| |||||||||||| |||| | ||||    
T  19358496 catcagattttcaaccatcacgttttcgctcataaaaatcaaaccgttaatctgttttcgatgttgttttcacctacatgttcctgacacttaactctat 19358595  T
Q  119 cataatctacag-aaaattcaagtttcaaccaccc-nnnnnnnntcgatttccaaacctcacataatcccttatttgcaaaaacgtttagacaccgactt 216  Q
    |||||| ||||| ||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||| || |    
T  19358596 cataatatacagaaaaattcaagtttcaaccacccaaaaaaaaatcgatttccaaacctcacataatcccttatttgcaaaaacgtttagacaccaacgt 19358695  T
Q  217 ttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    |||||||||||||| |||||||||| |||||||    
T  19358696 ttcaagcgaaaatctcaattttcattaacccaa 19358728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 19659480 - 19659613
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||||  ||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||| ||||||    
T  19659480 gacaacatcagattttcaaacttcacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgttcctgacacttagc 19659579  T
Q  114 cctatcataatctacag-aaaattcaagtttcaa 146  Q
    ||||||||||| ||||| ||||||||| ||||||    
T  19659580 cctatcataatgtacagaaaaattcaaatttcaa 19659613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 19 - 249
Target Start/End: Complemental strand, 6477674 - 6477446
Alignment:
Q  19 catcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagcccta 117  Q
    |||||||||||| ||| ||||||||||||| | |||||  ||||| ||||| |  |||| || ||||||||| ||| || | ||||||| ||||||| ||    
T  6477674 catcagattttctaactttcacgttttcgcgcgtaaaatccaaaccgttaacccatttttgatgccgttttcgcctacacgctcctgacacttagcctta 6477575  T
Q  118 tcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagacaccgact 215  Q
    |||| |||||||||||| ||||||||||||||||||        |||||||||||| |||||||||||| ||||||||||||  ||||||||||||||||    
T  6477574 tcattatctacagaaaaattcaagtttcaaccacccaaaaa---tcgatttccaaaacctcacataatcgcttatttgcaaa--cgtttagacaccgact 6477480  T
Q  216 tttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||| |||||||||||||| ||| |||||||    
T  6477479 tttcaagggaaaatcccaatttccattaacccaa 6477446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 22703580 - 22703815
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  ||||||||||||| | |||||  ||||  ||||| |  ||||||| ||||||||| ||| || | ||||||| |||||    
T  22703580 gacaacatcagattttctaatcttcacgttttcgcgcgtaaaatccaaatcgttaacccattttcgatgccgttttcgcctacacgctcctgacacttag 22703679  T
Q  113 ccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacac 210  Q
    | |||||||||||||||| ||||||||||||||||||||||        |||||||||| |||||||||||||| ||||||||| |||||||||||||||    
T  22703680 ctctatcataatctacagaaaaattcaagtttcaaccaccc---aaaaatcgatttccagaacctcacataatcacttatttgc-aaaacgtttagacac 22703775  T
Q  211 cgacttttcaagcg-aaaatcccaattttcatcaacccaa 249  Q
    | | ||||||| || ||||||||||||| |||||||||||    
T  22703776 caatttttcaaacgaaaaatcccaatttccatcaacccaa 22703815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 35 - 232
Target Start/End: Complemental strand, 24087993 - 24087798
Alignment:
Q  35 ttcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaa- 133  Q
    ||||||||||||| | |||||  ||||  || || | |||||||| ||||||||| ||| || | ||||||| |||||| |||||||||||||||||||     
T  24087993 ttcacgttttcgcgcgtaaaatccaaatcgtcaacccgttttcgatgccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaac 24087894  T
Q  134 attcaagtttcaaccacccnnnnnnnntcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatccc 232  Q
    |||||||||||||| ||||        || ||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  24087893 attcaagtttcaactacccaaaaa---tctatttccaaaacctcacataatcacttatttgcaaaa-cgtttagacaccgacttttcaagcgaaaatccc 24087798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 43707335 - 43707254
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  43707335 ccaaacctcacataatcacttatttgcaaaaacgtttagacaccgacctttcaagcgaaaatcccaattttcatgaacccaa 43707254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 23822376 - 23822247
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||  ||| ||||||||||||  ||||| |||||||| ||||||| |||||||| ||||||||||||| ||||||| |||| ||||||    
T  23822376 gacagcatcagatttcgaaccttcacgttttcgagcataacaatcaaaccgttaatccgttttcgatgccgttttcacctacatgttcatgacacttagc 23822277  T
Q  114 cctatcataatctacag-aaaattcaagtt 142  Q
    |||||| |||| ||||| ||||||||||||    
T  23822276 cctatcttaatgtacagaaaaattcaagtt 23822247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 23831455 - 23831326
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||  ||| ||||||||||||  ||||| |||||||| ||||||| |||||||| ||||||||||||| ||||||| |||| ||||||    
T  23831455 gacagcatcagatttcgaaccttcacgttttcgagcataacaatcaaaccgttaatccgttttcgatgccgttttcacctacatgttcatgacacttagc 23831356  T
Q  114 cctatcataatctacag-aaaattcaagtt 142  Q
    |||||| |||| ||||| ||||||||||||    
T  23831355 cctatcttaatgtacagaaaaattcaagtt 23831326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 152
Target Start/End: Complemental strand, 36891490 - 36891359
Alignment:
Q  22 cagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcat 121  Q
    |||||||||||| |  |||||||||| ||||||| |||||| |||||||  ||||||| ||||||||||||| | ||||| |||| |||||||||||| |    
T  36891490 cagattttcaacctctacgttttcgcgcataaaactcaaaccgttaatccattttcgatgccgttttcacctacgtgttcatgacacttagccctatctt 36891391  T
Q  122 aatctacag-aaaattcaagtttcaaccaccc 152  Q
    ||| ||||| ||||||||||||||||| ||||    
T  36891390 aatgtacagaaaaattcaagtttcaacaaccc 36891359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 149
Target Start/End: Complemental strand, 42178610 - 42178489
Alignment:
Q  28 ttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatcta 127  Q
    |||||| | ||||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| || ||| || |||||||||||||    
T  42178610 ttcaacttccacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataatcta 42178511  T
Q  128 cagaaaattcaagtttcaacca 149  Q
    ||  || |||| ||||||||||    
T  42178510 caagaatttcatgtttcaacca 42178489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 149
Target Start/End: Complemental strand, 12642281 - 12642170
Alignment:
Q  38 acgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattc 137  Q
    |||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| || ||| || |||||||||| |||| ||| |||    
T  12642281 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataatttacaaaaatttc 12642182  T
Q  138 aagtttcaacca 149  Q
    | ||||||||||    
T  12642181 atgtttcaacca 12642170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 232
Target Start/End: Complemental strand, 45618032 - 45617836
Alignment:
Q  35 ttcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaa 134  Q
    ||||||||||||| | |||||  ||||| |||||||||||||||||||||||||| ||| || | |||||   |||||   || |||||||||  |||||    
T  45618032 ttcacgttttcgcgcgtaaaatccaaactgttaatctgttttcgacgccgttttcgcctacacgctcctggaacttagatataccataatctattgaaaa 45617933  T
Q  135 -ttcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatccc 232  Q
     ||||||||||| ||||||        |||||||||| |||||||||||||| |||||||||||||| | ||| |||| |||||||||  ||||||||||    
T  45617932 attcaagtttcacccaccctaaaa---tcgatttccagaacctcacataatcgcttatttgcaaaaatgcttatacacggacttttcacacgaaaatccc 45617836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 41 - 149
Target Start/End: Complemental strand, 12636504 - 12636396
Alignment:
Q  41 ttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaag 140  Q
    ||||||| |||||||||||||| ||||||| |||||||| ||||||| | ||| |||| |||| || ||| || ||||||||||||||| ||| |||| |    
T  12636504 ttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgtttccgcctacatgctcctaacacttggcactatcataatctacaaaaatttcatg 12636405  T
Q  141 tttcaacca 149  Q
    |||||||||    
T  12636404 tttcaacca 12636396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 21274870 - 21274750
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||||| |  |||||||||| |||||||||||||| |||||||  ||||||| ||||||||| ||| |||| |||| || ||||||    
T  21274870 gacaacatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccattttcgatgccgttttcgcctacatgctcctaacacttagc 21274771  T
Q  114 cctatcataatctacagaaaa 134  Q
     |||||| |||  ||||||||    
T  21274770 actatcacaatgcacagaaaa 21274750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 149
Target Start/End: Complemental strand, 3799242 - 3799131
Alignment:
Q  38 acgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattc 137  Q
    |||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| || ||| || |||||||| | |||| ||| |||    
T  3799242 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcatattttacaaaaatttc 3799143  T
Q  138 aagtttcaacca 149  Q
    | ||||||||||    
T  3799142 atgtttcaacca 3799131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 152
Target Start/End: Complemental strand, 9653699 - 9653568
Alignment:
Q  22 cagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcat 121  Q
    ||||||||| |  ||||||||||||| | |||||||||||| ||||||| |||||||| | ||||||||||| | ||||| |||| |||||  ||||| |    
T  9653699 cagattttccaatttcacgttttcgcgcgtaaaaatcaaaccgttaatccgttttcgatgtcgttttcacctacgtgttcatgacacttagttctatctt 9653600  T
Q  122 aatctacag-aaaattcaagtttcaaccaccc 152  Q
    ||| || || ||||||||||||||||| ||||    
T  9653599 aatgtatagaaaaattcaagtttcaacaaccc 9653568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 16935056 - 16935159
Alignment:
Q  42 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 141  Q
    |||||| ||||||| |||||| ||||||| | ||| |||||||||||| ||| || | ||||||| |||||| ||||||||||||||||||| |||| ||    
T  16935056 tttcgcgcataaaattcaaaccgttaatcggattttgacgccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaatttcatgt 16935155  T
Q  142 ttca 145  Q
    ||||    
T  16935156 ttca 16935159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 17005716 - 17005819
Alignment:
Q  42 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 141  Q
    |||||| ||||||| |||||| ||||||| | ||| |||||||||||| ||| || | ||||||| |||||| ||||||||||||||||||| |||| ||    
T  17005716 tttcgcgcataaaattcaaaccgttaatcggattttgacgccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaatttcatgt 17005815  T
Q  142 ttca 145  Q
    ||||    
T  17005816 ttca 17005819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 168 - 249
Target Start/End: Original strand, 21245442 - 21245523
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||  |||| |||| || |||| ||||||    
T  21245442 ccaaacctcacataatctcttgtttgcaaaaacgtttagactccgacttttcaagcttaaattccaacttccatcgacccaa 21245523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 24273325 - 24273244
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||  |||| |||| || |||| ||||||    
T  24273325 ccaaacctcacataatctcttgtttgcaaaaacgtttagactccgacttttcaagcttaaattccaacttccatcgacccaa 24273244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 42 - 149
Target Start/End: Original strand, 34877461 - 34877569
Alignment:
Q  42 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacaga-aaattcaag 140  Q
    |||||| | ||||| ||||||  ||||||||||||||| ||||||||| ||  || | ||||||| |||||| |||||||| |||||||| |||||||||    
T  34877461 tttcgcgcgtaaaattcaaaccattaatctgttttcgatgccgttttcgccaacacgctcctgacacttagctctatcatattctacagagaaattcaag 34877560  T
Q  141 tttcaacca 149  Q
    |||||||||    
T  34877561 tttcaacca 34877569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 149
Target Start/End: Original strand, 8943466 - 8943574
Alignment:
Q  41 ttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaag 140  Q
    ||||||| |||||||||||||| |||| ||  ||||||| | ||||| | ||| |||| |||| || ||| || ||||||||||||||| ||| |||| |    
T  8943466 ttttcgcgcataaaaatcaaaccgttactccattttcgatgtcgtttccgcctacatgctcctaacacttggcactatcataatctacaaaaatttcatg 8943565  T
Q  141 tttcaacca 149  Q
    |||||||||    
T  8943566 tttcaacca 8943574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 27366994 - 27366874
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| |||||||||||| || ||||||||||||| | |||||| | ||| ||||| | |||||||| ||||||||| ||| || | || |||  | ||||    
T  27366994 gacagcatcagattttcgaccttcacgttttcgcgcgtaaaaacccaaccgttaacccgttttcgatgccgttttcgcctacacgctcatgagacatagc 27366895  T
Q  114 cctatcataatctacagaaaa 134  Q
     |||||||||||||| |||||    
T  27366894 tctatcataatctaccgaaaa 27366874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 249
Target Start/End: Original strand, 26904164 - 26904243
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||||||||| ||||||||| |||||||||| ||  ||||||||||| ||||||  |||| || |||||||||||    
T  26904164 ccaaacctcacataatctcttatttgc-aaaacgtttatacttcgacttttcaaacgaaaactccaa-ttccatcaacccaa 26904243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 24383415 - 24383475
Alignment:
Q  171 aacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcc 231  Q
    |||||||||||||| ||||||||||||| || ||| ||| ||||||| ||  |||||||||    
T  24383415 aacctcacataatcacttatttgcaaaagcgcttaaacatcgactttgcacacgaaaatcc 24383475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 111; Significance: 4e-56; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 21 - 250
Target Start/End: Complemental strand, 952 - 722
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    ||||||||||||| ||||||||||||  |||||||| ||||| ||||| | |||||||| ||||||||| ||| ||   ||||||| |||||| ||||||    
T  952 tcagattttcaaccttcacgttttcgtgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacactcctgacacttagctctatca 853  T
Q  121 taatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttc 219  Q
    |||||||||||||| || |||||||||||| ||        |||||||||||||||||||| ||  ||||||||||||||||||||||||| ||||||||    
T  852 taatctacagaaaaattaaagtttcaaccatccaaaaaaaatcgatttccaaacctcacatgatatcttatttgcaaaaacgtttagacactgacttttc 753  T
Q  220 aagcgaaaatcccaattttcatcaacccaat 250  Q
    |||||||||||||||||||||||| ||||||    
T  752 aagcgaaaatcccaattttcatcatcccaat 722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 134
Target Start/End: Complemental strand, 7702 - 7589
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    ||||||||||||| ||||||||||||  |||||||| ||||| ||||| | |||||||| ||||||||| ||| ||   ||||||| |||||| ||||||    
T  7702 tcagattttcaaccttcacgttttcgtgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacactcctgacacttagctctatca 7603  T
Q  121 taatctacagaaaa 134  Q
    ||||||||||||||    
T  7602 taatctacagaaaa 7589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 149
Target Start/End: Original strand, 26374 - 26480
Alignment:
Q  42 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 141  Q
    |||||| | ||||| |||||| |||||||   ||| || ||||||||| ||| || | ||||||| |||| | |||||||||||||||| ||||||||||    
T  26374 tttcgcgcgtaaaattcaaaccgttaatcgaattttgatgccgttttcgcctacacgctcctgacacttaactctatcataatctacag-aaattcaagt 26472  T
Q  142 ttcaacca 149  Q
     |||||||    
T  26473 ctcaacca 26480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 110; Significance: 2e-55; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 21 - 249
Target Start/End: Complemental strand, 40650 - 40423
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    ||||||||||||| ||||||||||||| |||||||||||||| ||||| | |||||||| ||||||||| |||  | | ||||||| |||||| ||||||    
T  40650 tcagattttcaaccttcacgttttcgcacataaaaatcaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgacacttagctctatca 40551  T
Q  121 taatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccgactttt 218  Q
    ||||||||| ||| |||||||||||||||||||        ||||||||| ||||||||||||||| |||||||||| |||||||||||||| ||||  |    
T  40550 taatctacaaaaagattcaagtttcaaccaccc---aaaaatcgatttccaaaacctcacataatcacttatttgcataaacgtttagacactgactact 40454  T
Q  219 caagcgaaaatcccaattttcatcaacccaa 249  Q
    |||||||||||||||||||||||||||||||    
T  40453 caagcgaaaatcccaattttcatcaacccaa 40423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 249
Target Start/End: Original strand, 25797 - 25973
Alignment:
Q  72 gttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttcc- 169  Q
    ||||||||  |||||||| ||| || | ||||||| |||||| |||||||| |||| |||||| ||||||||||||||||||        |||||||||     
T  25797 gttttcgataccgttttcgcctacacgctcctgacacttagctctatcatattctatagaaaaattcaagtttcaaccacccaaaaa---tcgatttccc 25893  T
Q  170 aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||| ||||||| |||| ||||||    
T  25894 aaacctcacataatctcttatttgcaaaaacgtttagactccgacttttcaagcgtaaattccaatttccatcgacccaa 25973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 14 - 237
Target Start/End: Original strand, 3721 - 3943
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||||| |||| |||||||| |||||||||||| | |||||| ||||||||| ||||||||| ||| |||| ||||||| ||||||    
T  3721 gacaacatcagattttcaaccttcatgttttcgcgcataaaaatcaatccgttaatgtgttttcgatgccgttttcgcctacatggtcctgacacttagc 3820  T
Q  114 cctatcataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacacc 211  Q
    |||||||||||||||||||| |||||||||||||||||||        ||||||| ||||||||||||||||| |||||||||||||||||| |||| ||    
T  3821 cctatcataatctacagaaagattcaagtttcaaccaccc---caaaatcgatttcccaaacctcacataatctcttatttgcaaaaacgttcagactcc 3917  T
Q  212 gacttttcaagcgaaaatcccaattt 237  Q
    ||||||||||||  |||| |||||||    
T  3918 gacttttcaagcataaattccaattt 3943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0377 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 21 - 242
Target Start/End: Complemental strand, 16540 - 16319
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    ||||||||||||| ||||||||||||| |||||||| ||||| ||||||| ||||||||  |||||||| ||| || | ||||||| |||||| ||||||    
T  16540 tcagattttcaaccttcacgttttcgcgcataaaaaccaaaccgttaatccgttttcgataccgttttcgcctacacgctcctgacacttagctctatca 16441  T
Q  121 taatctacag-aaaattcaagtttcaaccacccnnnnnnnntcga-tttccaaacctcacataatcccttatttgcaaaaacgtttagacaccgactttt 218  Q
    |||||||||| |||||||||||||||||||| |        |||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  16440 taatctacagaaaaattcaagtttcaaccacac-aaaaaaatcgattttccaaacctcacataatctcttatttgc-aaaacgtttagacaccgactttt 16343  T
Q  219 caagcgaaaatcccaattttcatc 242  Q
    ||| ||||||||||||||| ||||    
T  16342 caaacgaaaatcccaatttccatc 16319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 103; Significance: 2e-51; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 14 - 242
Target Start/End: Complemental strand, 8952483 - 8952257
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| |||||||||| |||| ||||||||||||| |||||||| ||||| ||||| | |||||||| ||||||||| ||| || | ||||||| ||||||    
T  8952483 gacaacatcagatttccaaccttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagc 8952384  T
Q  114 cctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacacc 211  Q
     |||||||||||||||| |||||||||||||||||||||         ||||||| ||||||||||||||||| ||||||||| ||||||||||||||||    
T  8952383 tctatcataatctacagaaaaattcaagtttcaaccacc---taaaaatcgatttcccaaacctcacataatctcttatttgc-aaaacgtttagacacc 8952288  T
Q  212 gacttttcaagcgaaaatcccaattttcatc 242  Q
    |||||||||| ||||||||||||||| ||||    
T  8952287 gacttttcaaacgaaaatcccaatttccatc 8952257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 21 - 249
Target Start/End: Original strand, 40726303 - 40726529
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    ||||||||||||| |||||||||||||||||||||| ||||| ||||| | |||||||| ||||||||| |||  | | ||||||| |||||||||||||    
T  40726303 tcagattttcaaccttcacgttttcgctcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgacacttagccctatca 40726402  T
Q  121 taatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccgactttt 218  Q
    ||||||| || ||||||||||||| ||||||||        ||| ||||| ||||||||||||||| ||||||||| |||||||||||||||||| | ||    
T  40726403 taatctatagaaaaattcaagtttaaaccaccc---aaaaatcggtttccaaaacctcacataatcacttatttgc-aaaacgtttagacaccgaatctt 40726498  T
Q  219 caagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||| ||| |||||||||||||||    
T  40726499 caagcgaaaattccagttttcatcaacccaa 40726529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 18318650 - 18318416
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||| | ||||||||||||| | |||||||||||| ||||| |||||||||| ||||||||| ||| |  | ||||||| ||||||    
T  18318650 gacagcatcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaacctgttttcgatgccgttttcgcctacgcgctcctgacacttagc 18318551  T
Q  114 cctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacacc 211  Q
     |||||| ||||||  | ||||||| ||||||||||||||        ||| ||||| ||||||||||||||| || |||||||||||  ||||||||||    
T  18318550 tctatcacaatctaaggaaaaattccagtttcaaccaccc---aaaaatcggtttccaaaacctcacataatcactcatttgcaaaaatatttagacacc 18318454  T
Q  212 gacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    |||| || |||||||||||| |||||| ||||||||||    
T  18318453 gactctttaagcgaaaatcctaatttttatcaacccaa 18318416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 249
Target Start/End: Complemental strand, 22777508 - 22777279
Alignment:
Q  19 catcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagcccta 117  Q
    |||||||||||| ||  ||||||||||||| ||||||| |||||| ||||  | |||||||| ||||||||| ||| || | || |||| |||| | |||    
T  22777508 catcagattttctaattttcacgttttcgcgcataaaattcaaactgttatcccgttttcgatgccgttttcgcctacacgctcatgacacttaactcta 22777409  T
Q  118 tcataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccgact 215  Q
    |||||||||||||||| ||||||||||||||| |||        ||||||||| ||||||||||||||| ||||||||||||| |||||||||||| | |    
T  22777408 tcataatctacagaaagattcaagtttcaaccgcccaaaaa---tcgatttcccaaacctcacataatctcttatttgcaaaa-cgtttagacacctatt 22777313  T
Q  216 tttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    |||||| ||||||||||||||| |||||||||||    
T  22777312 tttcaaacgaaaatcccaatttccatcaacccaa 22777279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 152
Target Start/End: Original strand, 21109334 - 21109467
Alignment:
Q  20 atcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatc 119  Q
    |||||||||||||| ||||||||||||| |||||| ||||||| |||||||||||||||| | ||||||||||| |||||||||||| ||||||||||||    
T  21109334 atcagattttcaaccttcacgttttcgcgcataaatatcaaaccgttaatctgttttcgatgtcgttttcacctacatgttcctgacacttagccctatc 21109433  T
Q  120 ataatctacag-aaaattcaagtttcaaccaccc 152  Q
    | ||| ||||| |||||| |||||||||| ||||    
T  21109434 acaatgtacagaaaaattgaagtttcaacaaccc 21109467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 232
Target Start/End: Complemental strand, 21297781 - 21297585
Alignment:
Q  35 ttcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaa 134  Q
    |||| |||||||| |||||||  ||||| ||||| | |||||||| | ||||||| ||| || | ||||||| |||||| |||||||||||| |||||||    
T  21297781 ttcatgttttcgcgcataaaatccaaactgttaacccgttttcgatgtcgttttcgcctacacgctcctgacacttagctctatcataatctccagaaaa 21297682  T
Q  135 -ttcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatccc 232  Q
     || |||||||||||||||        |||||||||| ||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  21297681 attaaagtttcaaccacccaaaaa---tcgatttccagaaccttacataatcacttatttgcaaaaacgtttagacagcgacttttcaagcgaaaatccc 21297585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 230
Target Start/End: Complemental strand, 21311324 - 21311130
Alignment:
Q  35 ttcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaa 134  Q
    |||| |||||||| |||||||  ||||| ||||| | |||||||| ||||||||| |||  | | ||||||| |||||| ||||||||||||||||||||    
T  21311324 ttcatgttttcgcgcataaaatccaaaccgttaacccgttttcgatgccgttttcgcctatacgctcctgacacttagctctatcataatctacagaaaa 21311225  T
Q  135 -ttcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatc 230  Q
     || ||||||| |||||||        |||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||    
T  21311224 attaaagtttcgaccacccaaaaa---tcgatttccagaacctcacataatcacttatttgcaaaaacttttagacaccgacttttcaagtgaaaatc 21311130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 21405920 - 21405850
Alignment:
Q  171 aacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcat 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21405920 aacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcat 21405850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 22111577 - 22111710
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||||| ||||||||||||| |||||||||||| | |||||||||||||||| ||||||||||||  |||||| ||| | ||||||    
T  22111577 gacagcatcagattttcaaccttcacgttttcgcacataaaaatcaatccgttaatctgttttcgatgccgttttcacccacatgtttctggcacttagc 22111676  T
Q  114 cctatcataatctacag-aaaattcaagtttcaa 146  Q
     |||||||||| || || ||||||||||||||||    
T  22111677 actatcataatgtatagaaaaattcaagtttcaa 22111710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 22357346 - 22357113
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  ||||||||||||| | |||||  ||||| |||||   |||||||| ||||||||| ||| || | ||||||| ||||     
T  22357346 gacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaactcgttttcgatgccgttttcgcctacacgctcctgacacttaa 22357247  T
Q  113 ccctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacac 210  Q
    | |||||| | ||||||||||| ||||||||||||||||||        |||||||||| |||||||||||||| ||||||||||||| |||||||||||    
T  22357246 ctctatca-attctacagaaaaattcaagtttcaaccacccaaaaa---tcgatttccagaacctcacataatcacttatttgcaaaa-cgtttagacac 22357152  T
Q  211 cgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||| ||||||| |||| |||||||||| |||||||||||    
T  22357151 cgatttttcaaacgaagatcccaatttccatcaacccaa 22357113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 20711518 - 20711644
Alignment:
Q  22 cagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcat 121  Q
    |||||||||||| | ||| ||||| | |||||||||||||| |||||||||||||||| | ||||||||||| ||||||| |||| |||||||||||| |    
T  20711518 cagattttcaacctccacattttcacgcataaaaatcaaaccgttaatctgttttcgatgtcgttttcacctacatgttcatgacacttagccctatctt 20711617  T
Q  122 aatctacag-aaaattcaagtttcaac 147  Q
    ||| ||||| |||||||||||||||||    
T  20711618 aatgtacagaaaaattcaagtttcaac 20711644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 241
Target Start/End: Complemental strand, 20765699 - 20765474
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| |||||||||||||   ||||||||||| | | |||||||||||| ||||| |  ||||||| ||||||||| ||| |  | ||||||| ||||||    
T  20765699 gacagcatcagattttcactcttcacgttttcacgcctaaaaatcaaaccgttaaccccttttcgatgccgttttcgcctacgcgctcctgacacttagc 20765600  T
Q  114 cctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacacc 211  Q
     |||||| ||||||||| ||||||| ||||||||||||||        | | ||||| ||||||||||||||| || |||||| ||||| ||||||||||    
T  20765599 tctatcacaatctacagaaaaattccagtttcaaccaccc---aaaaataggtttccaaaacctcacataatcactcatttgc-aaaacatttagacacc 20765504  T
Q  212 gacttttcaagcgaaaatcccaattttcat 241  Q
    |||| |||||||||||||| ||||||||||    
T  20765503 gactcttcaagcgaaaatctcaattttcat 20765474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 21204360 - 21204470
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||||| |  |||||||||| |||||||||||||| ||||||| |||||||| ||||||||||||| |||| |||| || ||||||    
T  21204360 gacagcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacatgctcctaacacttagc 21204459  T
Q  114 cctatcataat 124  Q
     ||||||||||    
T  21204460 actatcataat 21204470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 249
Target Start/End: Original strand, 23539431 - 23539604
Alignment:
Q  73 ttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacaga-aaattcaagtttcaaccacccnnnnnnnntcgatttcca- 170  Q
    ||||||| ||||||||| ||| || | ||||||| |||||| ||||||||||||||||| |||||||||||||||||||||        | ||||||||     
T  23539431 ttttcgatgccgttttcgcctacacgctcctgacacttagctctatcataatctacagataaattcaagtttcaaccaccc---aaaaattgatttccag 23539527  T
Q  171 aacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    |||||||||||||| ||||||||| |||||| || |||||||||||||||| |  |||| ||||||||||| |||||||    
T  23539528 aacctcacataatcacttatttgc-aaaacg-ttggacaccgacttttcaaacataaattccaattttcattaacccaa 23539604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 41 - 149
Target Start/End: Complemental strand, 9731020 - 9730912
Alignment:
Q  41 ttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaag 140  Q
    ||||||| |||||||||||||| ||||||| |||||||||||||||||| ||| |||| |||| || ||| || ||||||||||||||| ||| |||| |    
T  9731020 ttttcgcgcataaaaatcaaaccgttaatccgttttcgacgccgttttcgcctacatgctcctaacacttggcactatcataatctacaaaaatttcatg 9730921  T
Q  141 tttcaacca 149  Q
    |||||||||    
T  9730920 tttcaacca 9730912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 21650138 - 21650252
Alignment:
Q  20 atcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatc 119  Q
    |||||||||||||| | ||||||||||| |||||||||||||| ||||||| ||||| || | ||||||||||| | |||||  ||| ||||||||||||    
T  21650138 atcagattttcaacctccacgttttcgcgcataaaaatcaaaccgttaatccgtttttgatgtcgttttcacctacttgttcacgacacttagccctatc 21650237  T
Q  120 ataatctacagaaaa 134  Q
     |||| |||||||||    
T  21650238 ttaatgtacagaaaa 21650252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 10817415 - 10817650
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  ||||||||||| | | |||||  ||||| ||||| |  ||||||| ||| ||||| ||| || | ||||||| |||||    
T  10817415 gacaacatcagattttctaatcttcacgttttcacgcgtaaaatccaaaccgttaacccattttcgatgcccttttcgcctacacgctcctgacacttag 10817514  T
Q  113 ccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacac 210  Q
    | ||||||||||||| || ||||||||||||||||||||||        |||||||||| ||||||| |||||  ||||||||| ||||||||||||| |    
T  10817515 ctctatcataatctatagaaaaattcaagtttcaaccaccc---aaaaatcgatttccagaacctcatataattacttatttgc-aaaacgtttagacgc 10817610  T
Q  211 cgacttttcaagcg-aaaatcccaattttcatcaacccaa 249  Q
    ||| ||||||| || ||||||| ||||| ||| |||||||    
T  10817611 cgatttttcaaacgaaaaatccaaatttccataaacccaa 10817650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 22007325 - 22007197
Alignment:
Q  20 atcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatc 119  Q
    ||||||||||| || ||||||||||||| |||||||| ||||| ||||| | |||||||| ||||||||| ||| || | || |||  | |||| |||||    
T  22007325 atcagattttcgaccttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcatgagacatagcactatc 22007226  T
Q  120 ataatctacag-aaaattcaagtttcaac 147  Q
    ||||||||| | |||| ||||||||||||    
T  22007225 ataatctaccgaaaaactcaagtttcaac 22007197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 22470588 - 22470667
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaaccca 248  Q
    ||||||||||||||||| ||||||||| |||||||||| ||  ||||||||||| ||||||  ||||||| |||| |||||    
T  22470588 ccaaacctcacataatctcttatttgc-aaaacgtttatacttcgacttttcaaacgaaaactccaatttccatcgaccca 22470667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 149
Target Start/End: Complemental strand, 20197716 - 20197648
Alignment:
Q  81 gccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagtttcaacca 149  Q
    ||||||||| ||| || | ||||||| |||| | ||||||||||||||||||| ||||||| |||||||    
T  20197716 gccgttttcgcctacacgctcctgacacttaactctatcataatctacagaaatttcaagtctcaacca 20197648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 21 - 249
Target Start/End: Original strand, 4319 - 4542
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    ||||||||||||| ||||||||||||| |||||||||||||| ||||| | |||||| | ||||||||  |||  | |   ||||| |||||| ||||||    
T  4319 tcagattttcaaccttcacgttttcgcacataaaaatcaaactgttaacccgttttcaatgccgtttttgcctaaacg---ctgacacttagctctatca 4415  T
Q  121 taatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagacaccgactttt 218  Q
    |||||||||||||| ||||||||||||||||||        |||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||    
T  4416 taatctacagaaaaattcaagtttcaaccacccaaaaa---tcgatttccaaaacctcacataatcgcttatttgcaaaa-cgtttagacaccgactttt 4511  T
Q  219 caagcgaaaatcccaattttcatcaacccaa 249  Q
    |||| |||||||||||||||||| |||||||    
T  4512 caagggaaaatcccaattttcattaacccaa 4542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 21 - 241
Target Start/End: Complemental strand, 880 - 662
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    ||||||||||||| ||||||||||||| |||||||||||||| ||||| | |||||||| | ||||||| |||  | | ||||||| |||||| ||||||    
T  880 tcagattttcaaccttcacgttttcgcacataaaaatcaaaccgttaacccgttttcgatgtcgttttcgcctaaacgctcctgacacttagctctatca 781  T
Q  121 taatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccgactttt 218  Q
    ||||||| || ||||||||||||||||||||||        ||||||||| ||| ||||||||||| ||||||||| |||||||||||||||||||| ||    
T  780 taatctatagaaaaattcaagtttcaaccaccc---aaaaatcgatttccaaaatctcacataatcgcttatttgc-aaaacgtttagacaccgactctt 685  T
Q  219 caagcgaaaatcccaattttcat 241  Q
    |||| ||||||||||||||||||    
T  684 caagggaaaatcccaattttcat 662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 25964 - 25730
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| |||||||||| |||| ||||||||||||| |||||||| ||||| ||||| | |||||||| ||||||||| ||| || | ||||||| ||||||    
T  25964 gacaacatcagatttccaaccttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagc 25865  T
Q  114 cctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacacc 211  Q
     |||||||||||||||| |||||||||||||||||||||         ||||||||| ||||||||||||||| |||||||||||||||||||||||  |    
T  25864 tctatcataatctacagaaaaattcaagtttcaaccacc---aaaaaatcgatttccaaaacctcacataatctcttatttgcaaaaacgtttagacttc 25768  T
Q  212 gacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||||  || | ||||||| |||| ||||||    
T  25767 gacttttcaagcataatttccaatttccatcgacccaa 25730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 5e-46; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 21 - 237
Target Start/End: Original strand, 15373944 - 15374158
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    ||||||||||||| ||||||||||||  |||||||||||||  ||||| | |||||||| ||||||||||||| || ||||||||| ||||||| |||||    
T  15373944 tcagattttcaaccttcacgttttcggacataaaaatcaaatggttaacccgttttcgatgccgttttcacctacacgttcctgacacttagccttatca 15374043  T
Q  121 taatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgactttt 218  Q
    ||||||| | ||| |||||||||||||||||||        | ||||| ||||||||||||||||| ||||||||| |||||||||||||||||||| ||    
T  15374044 taatctataaaaagattcaagtttcaaccaccc---aaaaattgatttcccaaacctcacataatctcttatttgc-aaaacgtttagacaccgactatt 15374139  T
Q  219 caagcgaaaatcccaattt 237  Q
    ||| |||||||||||||||    
T  15374140 caaacgaaaatcccaattt 15374158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 21 - 249
Target Start/End: Original strand, 22354291 - 22354517
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    ||||||||||||| ||||||||||||||| |||||| ||||| ||||| | |||||||| ||||||||| |||  | | ||||||| |||||||||||||    
T  22354291 tcagattttcaaccttcacgttttcgctcttaaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgacacttagccctatca 22354390  T
Q  121 taatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccgactttt 218  Q
    ||||||| || ||||||||||||| ||||||||        ||| ||||| ||||||||||||||| ||||||||| |||||||||||||||||| | ||    
T  22354391 taatctatagaaaaattcaagtttaaaccaccc---aaaaatcggtttccaaaacctcacataatcacttatttgc-aaaacgtttagacaccgaatctt 22354486  T
Q  219 caagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||| ||| |||||||||||||||    
T  22354487 caagcgaaaattccagttttcatcaacccaa 22354517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 14280854 - 14281088
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||| | ||||||||||||| | |||||||||||| ||||| | |||||||| ||||||||| ||| |  | ||||||| | ||||    
T  14280854 gacagcatcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacacatagc 14280953  T
Q  114 cctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagacacc 211  Q
     |||||| ||||||||||||| ||  ||||||||||||||        ||| |||||||| |||||||||||| || |||||||||||| ||||||||||    
T  14280954 tctatcacaatctacagaaaaatttcagtttcaaccacccaaaaa---tcggtttccaaaacctcacataatcactcatttgcaaaaacatttagacacc 14281050  T
Q  212 gacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  14281051 gactcttcaagcgaaaatcccaattttcatcaatccaa 14281088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 21 - 242
Target Start/End: Original strand, 16223992 - 16224211
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    |||||||||||||  |||||||||||  |||||||||||||| ||||| | |||||||| | |||||||  || || | ||||||| |||||||||||||    
T  16223992 tcagattttcaaccatcacgttttcggacataaaaatcaaaccgttaacccgttttcgatgtcgttttcgtctacacgctcctgacacttagccctatca 16224091  T
Q  121 taatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgactttt 218  Q
    ||||||||| ||| |||||||||||||||||||        ||||||| ||||||||||||||||| ||||||| | |||||||||||||||||||| ||    
T  16224092 taatctacaaaaagattcaagtttcaaccaccc---aaaactcgatttcccaaacctcacataatctcttattt-ccaaaacgtttagacaccgactatt 16224187  T
Q  219 caagcgaaaatcccaattttcatc 242  Q
    ||| ||||||||||||||| ||||    
T  16224188 caaacgaaaatcccaatttccatc 16224211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 58 - 249
Target Start/End: Original strand, 6512273 - 6512462
Alignment:
Q  58 caaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaa-ttcaagtttcaaccacccnnnn 156  Q
    ||||| ||||| | |||||||| ||||||||| |||  ||| ||||||  |||||| |||||||||||||||||||| ||||||||||||||||||        
T  6512273 caaaccgttaacccgttttcgatgccgttttcgcctatatgctcctgaaacttagctctatcataatctacagaaaaattcaagtttcaaccacccaaaa 6512372  T
Q  157 nnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
        ||||||||| ||||||||||||||| ||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  6512373 a---tcgatttcccaaacctcacataatctcttatttgcaaaa-cgtttagacaccgatttttcaaacgaaaatcccaattttcatcaacccaa 6512462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 152
Target Start/End: Complemental strand, 52266343 - 52266205
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||| ||||||||||| ||||||||||||| |||||||||||||| ||||||| |||||||| | ||||||||||| ||||||| |||| ||||||    
T  52266343 gacagcataagattttcaaccttcacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgtcgttttcacctacatgttcatgacacttagc 52266244  T
Q  114 cctatcataatctacagaaaattcaagtttcaaccaccc 152  Q
    |||||| |||| |||||||||||||||||||||| ||||    
T  52266243 cctatcttaatgtacagaaaattcaagtttcaacaaccc 52266205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 21 - 242
Target Start/End: Complemental strand, 20899185 - 20898966
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    ||||||||||||| ||||||||||||| |||||||||||||| ||||| | |||||||| ||||||||| |||  | | || |||  |||||| ||||||    
T  20899185 tcagattttcaaccttcacgttttcgcacataaaaatcaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcatgaaacttagctctatca 20899086  T
Q  121 taatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccgactttt 218  Q
    ||||||| || |||||||||| |||||||||||        ||||| ||| |||||||||| |||| ||||||||| |||||||||||||||||||||||    
T  20899085 taatctatagaaaaattcaagcttcaaccaccc---aaaaatcgatctccaaaacctcacacaatcacttatttgc-aaaacgtttagacaccgactttt 20898990  T
Q  219 caagcgaaaatcccaattttcatc 242  Q
    ||| |||||||| |||||| ||||    
T  20898989 caaacgaaaatctcaatttccatc 20898966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 23 - 242
Target Start/End: Original strand, 15368146 - 15368362
Alignment:
Q  23 agattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcata 122  Q
    ||||||||||| ||||||||| ||  |||||||||||||| ||||| | |||||||| | ||||||| ||| || | ||||||| |||||||||||||||    
T  15368146 agattttcaaccttcacgttt-cggacataaaaatcaaaccgttaacccgttttcgatgtcgttttcgcctacacgctcctgacacttagccctatcata 15368244  T
Q  123 atctacagaaa-attcaagtttcaaccacccnnnnnnnntcga-tttccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttca 220  Q
    ||||||| ||| |||||||||||||||||||        |||| || ||||||||||||||||  ||||||||| ||||||||||||| |||||| ||||    
T  15368245 atctacaaaaagattcaagtttcaaccaccc---aaaaatcgacttgccaaacctcacataatttcttatttgc-aaaacgtttagacgccgactattca 15368340  T
Q  221 agcgaaaatcccaattttcatc 242  Q
    | ||||||||||||||| ||||    
T  15368341 atcgaaaatcccaatttccatc 15368362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 54798352 - 54798123
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| |||||||||| || | ||||||||||||| | |||||| ||||| ||||| | |||||||| ||||||||| ||| |  | ||||||| | ||||    
T  54798352 gacagcatcagatttccacccttcacgttttcgcgcctaaaaaacaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacacatagc 54798253  T
Q  114 cctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagacacc 211  Q
     |||||| ||||||||||||| ||| ||||||||||||||        ||| |||||||| ||||||||||||  | || ||||||||| ||||||||||    
T  54798252 tctatcacaatctacagaaaaattccagtttcaaccacccaaaaa---tcggtttccaaaacctcacataatcagtcatatgcaaaaacatttagacacc 54798156  T
Q  212 gacttttcaagcgaaaatcccaattttcatcaa 244  Q
    |||| ||||||||||||||||||||||||||||    
T  54798155 gactcttcaagcgaaaatcccaattttcatcaa 54798123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 4830604 - 4830371
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  ||||||||||||| |||||||  ||||| ||||| | |||||||| ||||||||| ||| || | ||||||| |||||    
T  4830604 gacaacatcagattttctaatcttcacgttttcgcgcataaaatccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttag 4830505  T
Q  113 ccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacac 210  Q
    | |||||||||||||||| ||||||||||||||||||||||        | |||||||| |||||||||||||| ||||||||| |||||| || |||||    
T  4830504 ctctatcataatctacagaaaaattcaagtttcaaccaccc---aaaaattgatttccagaacctcacataatcacttatttgc-aaaacg-ttggacac 4830410  T
Q  211 cgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||| |  |||| ||||||||||| |||||||    
T  4830409 cgacttttcaaacataaattccaattttcattaacccaa 4830371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 4833899 - 4833666
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  ||||||||||||| |||||||  ||||| ||||| | |||||||| ||||||||| ||| || | ||||||| |||||    
T  4833899 gacaacatcagattttctaatcttcacgttttcgcgcataaaatccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttag 4833800  T
Q  113 ccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacac 210  Q
    | |||||||||||||||| ||||||||||||||||||||||        | |||||||| |||||||||||||| ||||||||| |||||| || |||||    
T  4833799 ctctatcataatctacagaaaaattcaagtttcaaccaccc---aaaaattgatttccagaacctcacataatcacttatttgc-aaaacg-ttggacac 4833705  T
Q  211 cgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||| |  |||| ||||||||||| |||||||    
T  4833704 cgacttttcaaacataaattccaattttcattaacccaa 4833666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 147
Target Start/End: Complemental strand, 26921907 - 26921778
Alignment:
Q  19 catcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctat 118  Q
    ||||||||||||||| | || |||||||| |||||||||||||| |||||||||||||||| | ||||||||||| |||||||||||| |||||| ||||    
T  26921907 catcagattttcaacctacatgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgtcgttttcacctacatgttcctgacacttagcactat 26921808  T
Q  119 cataatctacag-aaaattcaagtttcaac 147  Q
    |||| | ||||| |||||||||||||||||    
T  26921807 catattgtacagaaaaattcaagtttcaac 26921778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 35 - 245
Target Start/End: Original strand, 18230367 - 18230575
Alignment:
Q  35 ttcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaa 134  Q
    ||||||||||||| | |||||  |||   ||||| | |||||||| | ||||||| |||  | | ||||||| |||||| ||||| ||||||||||||||    
T  18230367 ttcacgttttcgcacttaaaatccaatgcgttaacccgttttcgatgtcgttttcgcctaaacgctcctgacacttagctctatcgtaatctacagaaaa 18230466  T
Q  135 -ttcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatccc 232  Q
     ||||||||||||||||||        || ||||||| |||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||    
T  18230467 attcaagtttcaaccacccaaaaa---tcaatttccagaacctcacataatcacttatttgcaaaa-cgtttagacaccgagttttcaagcgaaaatccc 18230562  T
Q  233 aattttcatcaac 245  Q
    |||||||||||||    
T  18230563 aattttcatcaac 18230575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 168 - 245
Target Start/End: Complemental strand, 9870740 - 9870663
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaac 245  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  9870740 ccaaacctcacataatcccttacttgcaaaaacgtttagacaccgacttttcaagcgaaaatctcaattttcatcaac 9870663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 142
Target Start/End: Complemental strand, 30233323 - 30233202
Alignment:
Q  22 cagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcat 121  Q
    |||||||||||  ||||||||||||| |||||||||||||| ||||||| |||||||| ||||||||||||| ||||||| |||| |||||||||||| |    
T  30233323 cagattttcaatcttcacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacatgttcttgacacttagccctatctt 30233224  T
Q  122 aatctacag-aaaattcaagtt 142  Q
    ||| ||||| ||||||||||||    
T  30233223 aatgtacagaaaaattcaagtt 30233202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 223
Target Start/End: Complemental strand, 14931569 - 14931362
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| |||||||||| |||| ||||||||||| | | |||||| ||||| ||||| | ||||| || ||||||||| ||| |  | ||||||| ||| ||    
T  14931569 gacaacatcagatttccaaccttcacgttttcacgcgtaaaaaccaaaccgttaacccgtttttgatgccgttttcgcctacccgctcctgacacttggc 14931470  T
Q  114 cctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcga-tttccaaacctcacataatcccttatttgcaaaaacgtttagacacc 211  Q
     ||||||||||||| || ||||||||||||||||||||||        |||| |||||||||||||||||||| ||||||||| ||||||||||||| ||    
T  14931469 tctatcataatctatagaaaaattcaagtttcaaccaccc---aaaaatcgattttccaaacctcacataatctcttatttgc-aaaacgtttagactcc 14931374  T
Q  212 gacttttcaagc 223  Q
    ||||||||||||    
T  14931373 gacttttcaagc 14931362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 2584591 - 2584358
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  ||||||||||||| | |||||  ||||| ||||| |  ||| ||| ||||||||| ||| || | ||||||| |||||    
T  2584591 gacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacccatttacgatgccgttttcgcctacacgctcctgacacttag 2584492  T
Q  113 ccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacac 210  Q
    | |||||||||||||||| ||||||||||||||||||||||        |||||||||| |||||||||||||| ||||||||| |||||| || |||||    
T  2584491 ctctatcataatctacagaaaaattcaagtttcaaccaccc---aaaaatcgatttccagaacctcacataatcacttatttgc-aaaacg-ttggacac 2584397  T
Q  211 cgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||| |  |||| ||||||||||| |||||||    
T  2584396 cgacttttcaaacataaattccaattttcattaacccaa 2584358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 168 - 249
Target Start/End: Original strand, 3338129 - 3338210
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    |||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3338129 ccaaacctcacatagtcccttatttgcaagaatgtttagacaccgacttttcaagcgaaaatcccaattttcatgaacccaa 3338210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 82 - 242
Target Start/End: Original strand, 15371712 - 15371871
Alignment:
Q  82 ccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcaca 179  Q
    |||||||| ||| || | ||||||| |||||||||||||||||||||| ||| |||||||||||||| ||||        ||||||||| ||||||||||    
T  15371712 ccgttttcgcctacacgctcctgacacttagccctatcataatctacaaaaagattcaagtttcaactacccaaaaaa--tcgatttcccaaacctcaca 15371809  T
Q  180 taatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatc 242  Q
    ||||| ||||||||||||| |||||||||||||||| ||||| ||||||||||||||| ||||    
T  15371810 taatctcttatttgcaaaa-cgtttagacaccgactattcaaacgaaaatcccaatttccatc 15371871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 152
Target Start/End: Complemental strand, 15852178 - 15852039
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||||| ||||| |||| || |||||||||||||  ||||||| |||||||| ||||||||||||| ||||||| |||| ||||||    
T  15852178 gacagcatcagattttcaaccttcacatttttgcgcataaaaatcaaattgttaatccgttttcgatgccgttttcacctacatgttcatgacacttagc 15852079  T
Q  114 cctatcataatctaca-gaaaattcaagtttcaaccaccc 152  Q
    |||||| |||| ||||  |||| |||||||||||| ||||    
T  15852078 cctatcttaatgtacataaaaaatcaagtttcaacaaccc 15852039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 249
Target Start/End: Original strand, 27028362 - 27028584
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    ||||||||||||| ||||||||||||| |||||||||||||| |   | | |||||||| ||||||||| |||  | | ||||||| |||||| ||||||    
T  27028362 tcagattttcaaccttcacgttttcgcacataaaaatcaaaccg---acccgttttcgatgccgttttcgcctaaacgctcctgacacttagctctatca 27028458  T
Q  121 taatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgactttt 218  Q
    |||||||||| ||||||||||||||||||||||        | ||||| ||||| ||||||| ||||||||||||| |||||| || |||||| || |||    
T  27028459 taatctacagaaaaattcaagtttcaaccaccc---aaaaattgatttcccaaaactcacatgatcccttatttgc-aaaacg-ttggacaccaaccttt 27028553  T
Q  219 caagcgaaaatcccaattttcatcaacccaa 249  Q
    ||| |  |||||||||||||||| |||||||    
T  27028554 caaacataaatcccaattttcattaacccaa 27028584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 13447135 - 13447368
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  ||||||||||||| | |||||  ||||| ||||| |  |||| || ||||||||| ||| || | ||||||| ||||     
T  13447135 gacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaactgttaacccatttttgatgccgttttcgcctacacgctcctgacacttat 13447234  T
Q  113 ccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttc-caaacctcacataatcccttatttgcaaaaacgtttagacac 210  Q
    | |||||||||||||||| ||||||||||||||||||||||        ||||||||  ||||||||||||||| ||||||||  |||||| |||||||     
T  13447235 ctctatcataatctacagaaaaattcaagtttcaaccaccc---aaaaatcgatttctaaaacctcacataatcgcttatttg-taaaacg-ttagacat 13447329  T
Q  211 cgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||| |||||| ||||||| |||||||||| |||||||    
T  13447330 cgactcttcaagggaaaatctcaattttcattaacccaa 13447368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 4615492 - 4615359
Alignment:
Q  19 catcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctat 118  Q
    |||||||||| |||| ||||||||||||| |||||||| ||||| |||||   || ||||| ||||||||| ||| || |  |||||| |||||| ||||    
T  4615492 catcagatttccaaccttcacgttttcgcgcataaaaaccaaaccgttaactcgtcttcgatgccgttttcgcctacacgcacctgacacttagctctat 4615393  T
Q  119 cataatctacag-aaaattcaagtttcaaccacc 151  Q
    |||||||||||| |||||| ||||||||||||||    
T  4615392 cataatctacagaaaaattgaagtttcaaccacc 4615359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 149
Target Start/End: Complemental strand, 7132704 - 7132593
Alignment:
Q  38 acgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattc 137  Q
    |||||||||| |||||||||||||| ||||||| ||||||||  |||||||| ||| |||| |||| || ||| || ||||||||||||||| ||| |||    
T  7132704 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgataccgttttcgcctacatgctcctaacacttggcactatcataatctacaaaaatttc 7132605  T
Q  138 aagtttcaacca 149  Q
    | ||||||||||    
T  7132604 atgtttcaacca 7132593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 149
Target Start/End: Original strand, 20000340 - 20000451
Alignment:
Q  38 acgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattc 137  Q
    |||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| || ||| || |||||||||| |||| ||| |||    
T  20000340 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataatttacaaaaatttc 20000439  T
Q  138 aagtttcaacca 149  Q
    | ||||||||||    
T  20000440 atgtttcaacca 20000451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 146
Target Start/End: Complemental strand, 5683164 - 5683060
Alignment:
Q  42 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 141  Q
    |||||| ||||||| |||||| ||||||| | ||| |||||||||||| ||| || | ||||||| |||||| ||||||||||||||||||| |||| ||    
T  5683164 tttcgcgcataaaattcaaaccgttaatcggattttgacgccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaatttcatgt 5683065  T
Q  142 ttcaa 146  Q
    |||||    
T  5683064 ttcaa 5683060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 152
Target Start/End: Original strand, 15403159 - 15403287
Alignment:
Q  23 agattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcata 122  Q
    ||||||||||| ||||||||| ||  |||||||||||||| ||||  | |||||||| | ||||||| ||| || | ||||||| |||||||||||||||    
T  15403159 agattttcaaccttcacgttt-cggacataaaaatcaaaccgttaccc-gttttcgatgtcgttttcgcctacacgctcctgacacttagccctatcata 15403256  T
Q  123 atctacagaaa-attcaagtttcaaccaccc 152  Q
    ||||||| ||| |||||||||||| ||||||    
T  15403257 atctacaaaaagattcaagtttcacccaccc 15403287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 147
Target Start/End: Original strand, 16157410 - 16157535
Alignment:
Q  23 agattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcata 122  Q
    |||||||| || ||||||||||||| |||||||| ||||| ||||| | |||||||| ||||||||| ||| || | || |||  | |||| ||||||||    
T  16157410 agattttcgaccttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcatgagacatagcactatcata 16157509  T
Q  123 atctacag-aaaattcaagtttcaac 147  Q
    |||||| | |||| ||||||||||||    
T  16157510 atctaccgaaaaactcaagtttcaac 16157535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 15273123 - 15273059
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcg 78  Q
    |||| ||||||||||||||| |  |||||||||| |||||||||||||| ||||||| |||||||    
T  15273123 gacaacatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcg 15273059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 149
Target Start/End: Complemental strand, 54363891 - 54363791
Alignment:
Q  49 cataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagtttcaacc 148  Q
    ||||||| |||||| ||||||  | ||| || ||||||||| ||| || | || |||| |||||| ||||||||||||| ||||| ||||||||||||||    
T  54363891 cataaaattcaaaccgttaattggattttgatgccgttttcgcctacacgctcgtgacacttagctctatcataatctatagaaatttcaagtttcaacc 54363792  T
Q  149 a 149  Q
    |    
T  54363791 a 54363791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 149
Target Start/End: Complemental strand, 15214226 - 15214119
Alignment:
Q  42 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 141  Q
    |||||| | ||||| |||||| ||||||| | ||| || ||||||||| ||| || | ||||||| ||| || ||||||||||||||||| | |||||||    
T  15214226 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgctcctgacacttggctctatcataatctacagatatttcaagt 15214127  T
Q  142 ttcaacca 149  Q
    | ||||||    
T  15214126 tacaacca 15214119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 242
Target Start/End: Original strand, 15991026 - 15991099
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatc 242  Q
    ||||||||||||||||| ||||||||| |||||||||| ||  ||||||||||| |||||   ||||||||||||    
T  15991026 ccaaacctcacataatctcttatttgc-aaaacgtttatacttcgacttttcaaacgaaacctccaattttcatc 15991099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 8574381 - 8574316
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcga 79  Q
    |||| ||||||||||||| | ||||||||||||| | |||||||||||| ||||| | ||||||||    
T  8574381 gacagcatcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaacccgttttcga 8574316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 15371663 - 15371710
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaa 68  Q
    ||||||||||||| ||||||||||||  |||||||||||||| |||||    
T  15371663 tcagattttcaaccttcacgttttcggacataaaaatcaaaccgttaa 15371710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 149
Target Start/End: Complemental strand, 45314498 - 45314400
Alignment:
Q  51 taaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagtttcaacca 149  Q
    ||||| |||||| ||||||| | ||| || | ||||||| ||| || | ||||||  |||| | ||||||||||||||||||| ||||||| |||||||    
T  45314498 taaaattcaaaccgttaatcggattttgatgtcgttttcgcctacacgatcctgatacttaactctatcataatctacagaaatttcaagtctcaacca 45314400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 249
Target Start/End: Original strand, 10705491 - 10705572
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||| ||||||| ||| |||| |||||||||||| | | ||||||||||||  |||  ||||||| |||| ||||||    
T  10705491 ccaaacctcccataatctcttgtttggaaaaacgtttagcctctgacttttcaagcataaactccaatttccatcgacccaa 10705572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 249
Target Start/End: Original strand, 10919261 - 10919342
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||| ||||||| ||| |||| |||||||||||| | | ||||||||||||  |||  ||||||| |||| ||||||    
T  10919261 ccaaacctcccataatctcttgtttggaaaaacgtttagcctctgacttttcaagcataaactccaatttccatcgacccaa 10919342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 21 - 242
Target Start/End: Complemental strand, 35979 - 35760
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    |||||||||||||| |||||||||||| |||||||| ||||| ||||| | |||||||| ||||||||| ||| || | ||||||| |||| | ||||||    
T  35979 tcagattttcaacaatcacgttttcgcgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttatctctatca 35880  T
Q  121 taatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgactttt 218  Q
    ||||||||||||| |||||||||||||||| |         ||||||| ||||||||||||| ||| ||||||||| |||||||||||||||||||||||    
T  35879 taatctacagaaatattcaagtttcaaccatc---taaatatcgatttcccaaacctcacattatctcttatttgc-aaaacgtttagacaccgactttt 35784  T
Q  219 caagcgaaaatcccaattttcatc 242  Q
    ||| ||||||||||||||| ||||    
T  35783 caaacgaaaatcccaatttccatc 35760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 14 - 152
Target Start/End: Original strand, 76793 - 76932
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| ||||||| |||| ||||||    
T  76793 gacaacatcagattttcaaccttcacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgttcttgacacttagc 76892  T
Q  114 cctatcataatctacag-aaaattcaagtttcaaccaccc 152  Q
    ||||||||||| ||||| ||||||||||||||||| ||||    
T  76893 cctatcataatgtacagaaaaattcaagtttcaacaaccc 76932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 90; Significance: 1e-43; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 75395 - 75630
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  ||||||||||||| | |||||  ||||| ||||| | |||||||| ||||||||| ||| |  | |||||||  ||||    
T  75395 gacaacatcagattttccaattttcacgttttcgcgcgtaaaatccaaactgttaacccgttttcgatgccgttttcgcctacgcgctcctgacatttag 75494  T
Q  113 ccctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacac 210  Q
    | |||| ||||||||||||||| ||||||||||||||||||        ||| |||||| |||||||||||||| |||||||||||||||||||||||||    
T  75495 ctctataataatctacagaaaaattcaagtttcaaccacccaaaaa---tcggtttccagaacctcacataatcacttatttgcaaaaacgtttagacac 75591  T
Q  211 cgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||||| ||||||| |||||||||||||||||    
T  75592 cgacttttcaagcaaaaatccaaattttcatcaacccaa 75630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 60032 - 60266
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  |||||||||||||   |||||| ||||| ||||| | |||||||| ||||||||| ||| || | ||||||| |||||    
T  60032 gacaacatcagattttctaattttcacgttttcgcgagtaaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttag 60131  T
Q  113 ccctatcataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacac 210  Q
    | ||||||||||||||| ||| |||||||||||||||||||        ||||||||| ||||||||||||||| ||||||||||||| ||||||| |||    
T  60132 cactatcataatctacaaaaagattcaagtttcaaccacccaaaaa---tcgatttcccaaacctcacataatctcttatttgcaaaa-cgtttagtcac 60227  T
Q  211 cgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||| ||||||| ||||||||||||||| |||||||||||    
T  60228 cgatttttcaaacgaaaatcccaatttccatcaacccaa 60266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 249
Target Start/End: Original strand, 72550 - 72782
Alignment:
Q  19 catcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagcccta 117  Q
    |||||||||||| ||  ||||||||||||| | |||||  ||||| ||||| | |||||| |  |||||||| ||| || | ||||||| |||||| |||    
T  72550 catcagattttccaattttcacgttttcgcgcgtaaaatccaaactgttaacccgttttcaataccgttttcgcctacacgctcctgacacttagctcta 72649  T
Q  118 tcataatctacagaaaat----tcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacaccg 212  Q
    | |||||||||||||||     |||||||||||||||||        ||| |||||| |||||||||||||| |||||||||||||||||||||||||||    
T  72650 taataatctacagaaaaaaaaatcaagtttcaaccacccaaaaa---tcggtttccagaacctcacataatcacttatttgcaaaaacgtttagacaccg 72746  T
Q  213 acttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  72747 acttttcaagcgaaaat-ccaattatcatcaacccaa 72782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 187678 - 187612
Alignment:
Q  22 cagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgtttt 88  Q
    ||||||||| |  |||||||||||||   |||||||||||| ||||||| |||||||| ||||||||    
T  187678 cagattttccaatttcacgttttcgcgtgtaaaaatcaaaccgttaatccgttttcgatgccgtttt 187612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 87; Significance: 8e-42; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 24 - 241
Target Start/End: Original strand, 18463 - 18678
Alignment:
Q  24 gattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataa 123  Q
    |||||||||| ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||||||| |||  |   ||||||| ||| || |||||||||    
T  18463 gattttcaaccttcacgttttcgcacataaaaatcaaaccgttaacccattttcgatgccgttttcgcctaaacactcctgacacttggctctatcataa 18562  T
Q  124 tctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaa 221  Q
    ||||||| ||||||||||||||||||||||        ||||| ||| |||||||||| |||| ||||||||| |||||||| |||||||||||||||||    
T  18563 tctacagaaaaattcaagtttcaaccaccc---aaaaatcgatctccaaaacctcacacaatcacttatttgc-aaaacgttcagacaccgacttttcaa 18658  T
Q  222 gcgaaaatcccaattttcat 241  Q
    ||||||||||||||||||||    
T  18659 gcgaaaatcccaattttcat 18678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 14392 - 14470
Alignment:
Q  20 atcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatg 98  Q
    |||| ||||||||| |  |||||||||| |||||||||||||| ||||||| |||||| | ||||||||||||| ||||    
T  14392 atcaaattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttctatgccgttttcacctacatg 14470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 2443 - 2209
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| |||||||||| |||| ||||||||||| | |||||||| ||||| ||||| | |||||||| ||||||||| ||| |||| |||| || ||||||    
T  2443 gacaacatcagatttccaaccttcacgttttctcgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacatgctccttacacttagc 2344  T
Q  114 cctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacacc 211  Q
     ||||||||||||| || |||||||||||||||||||||         | ||||| ||||||||||||||||| ||||||| |||||||||||||||  |    
T  2343 tctatcataatctatagaaaaattcaagtttcaaccacc---taaaaattgatttcccaaacctcacataatctcttattttcaaaaacgtttagacttc 2247  T
Q  212 gacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||||  |||| ||||||| |||||||||||    
T  2246 gacttttcaagcataaattccaatttccatcaacccaa 2209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 82; Significance: 8e-39; HSPs: 4)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 11048 - 10967
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11048 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 10967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 5330 - 5249
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5330 ccaaacctcacataatcccttatttgtaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 5249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 146
Target Start/End: Complemental strand, 151 - 47
Alignment:
Q  42 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 141  Q
    |||||| | ||||| |||||| ||||||| | ||| || ||||||||| ||| ||   ||||||| | | || ||||||||||||||||||| |||||||    
T  151 tttcgcgcgtaaaattcaaactgttaatcagattttgatgccgttttcgcctacactctcctgacacatggctctatcataatctacagaaatttcaagt 52  T
Q  142 ttcaa 146  Q
     ||||    
T  51 ctcaa 47  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 146
Target Start/End: Complemental strand, 5455 - 5351
Alignment:
Q  42 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 141  Q
    |||||| | ||||| |||||| ||||||| | ||| || ||||||||| ||| ||   ||||||| | | || ||||||||||||||||||| |||||||    
T  5455 tttcgcgcgtaaaattcaaactgttaatcagattttgatgccgttttcgcctacactctcctgacacatggctctatcataatctacagaaatttcaagt 5356  T
Q  142 ttcaa 146  Q
     ||||    
T  5355 ctcaa 5351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 72262 - 72496
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||| | ||||||||||||| | |||||||||||| ||||| | |||||||| ||| ||||| ||| |  | ||||||| ||||||    
T  72262 gacagcatcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaacccgttttcgatgccattttcgcctacgcgctcctgacacttagc 72361  T
Q  114 cctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacacc 211  Q
     |||||| ||||||||| |||||||  |||||||||||||        ||| ||||| ||| ||||||||||| || ||||| |||||| ||||||||||    
T  72362 tctatcacaatctacagaaaaattcctgtttcaaccaccc---aaaaatcggtttccaaaatctcacataatcactcatttgtaaaaacatttagacacc 72458  T
Q  212 gacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  72459 gactcttcaagcgaaaatcccaattttcatcaatccaa 72496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 21 - 242
Target Start/End: Original strand, 3505 - 3724
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    ||||||||| ||| ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||||||| |||  | | ||||||| |||||| ||||||    
T  3505 tcagattttaaaccttcacgttttcgcacataaaaatcaaaccgttaacccattttcgatgccgttttcgcctaaacgctcctgacacttagctctatca 3604  T
Q  121 taatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttc 219  Q
    |||||||||| ||||||||||||||||||||||        | |  |   |||||||||| |||| ||||||||| ||||||||||||||||||||||||    
T  3605 taatctacagaaaaattcaagtttcaaccacccaaaaatcgttg--tataaaacctcacacaatcacttatttgc-aaaacgtttagacaccgacttttc 3701  T
Q  220 aagcgaaaatcccaattttcatc 242  Q
    || ||||||||||||||| ||||    
T  3702 aaacgaaaatcccaatttacatc 3724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 147228 - 147461
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  ||||||||||||| |||||||  ||||| ||||| | |||||||| ||||||||| ||| || | ||||||| |||||    
T  147228 gacaacatcagattttctaatcttcacgttttcgcgcataaaatccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttag 147327  T
Q  113 ccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacac 210  Q
    | |||||||||||||||| ||||||||||||||||||||||        |||||||||| |||||||||||||| ||||||||| |||||| || |||||    
T  147328 ctctatcataatctacagaaaaattcaagtttcaaccaccc---aacaatcgatttccagaacctcacataatcacttatttgc-aaaacg-ttggacac 147422  T
Q  211 cgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||| |  |||| ||||||||||| |||||||    
T  147423 cgacttttcaaacataaattccaattttcattaacccaa 147461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 146
Target Start/End: Original strand, 87737 - 87862
Alignment:
Q  22 cagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcat 121  Q
    |||||||||||| | ||||||||||| |||||||||||||| ||||||| |||||||| ||||||||||||| | ||||| |||| |||||||||||| |    
T  87737 cagattttcaacctccacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacgtgttcatgacacttagccctatctt 87836  T
Q  122 aatctacag-aaaattcaagtttcaa 146  Q
    ||| ||||| ||||||||||||||||    
T  87837 aatgtacagaaaaattcaagtttcaa 87862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 72 - 249
Target Start/End: Original strand, 804 - 978
Alignment:
Q  72 gttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttcca 170  Q
    |||||||| | ||||||| ||| || | ||||||| |||||| |||||||||||||||||||| ||||||||||||||||||        ||||||||||    
T  804 gttttcgatgtcgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccacccaacaa---tcgatttcca 900  T
Q  171 -aacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
     |||||||||||||| |||||||||||| |  |||||||||||| |||||||||||||||||||||||||| ||||||||    
T  901 gaacctcacataatcacttatttgcaaaca--tttagacaccgagttttcaagcgaaaatcccaattttcaccaacccaa 978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 242
Target Start/End: Original strand, 3489 - 3711
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    |||| |||| ||| |||| ||||||||  ||||||| ||||  ||||| | |||||||| ||||||||| ||| || | ||||||| |||||| ||||||    
T  3489 tcaggtttttaaccttcatgttttcgcgtataaaaaccaaatcgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagctctatca 3588  T
Q  121 taatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccgactttt 218  Q
    ||||| | ||||| |||||||||||||| ||||        ||||||||| ||||||||||| ||| ||||||||||||| |||||||||||||||||||    
T  3589 taatcaaaagaaatattcaagtttcaactacccaaaaaaaatcgatttcccaaacctcacatgatctcttatttgcaaaa-cgtttagacaccgactttt 3687  T
Q  219 caagcgaaaatcccaattttcatc 242  Q
    ||| ||||||||||||||| ||||    
T  3688 caaacgaaaatcccaatttccatc 3711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 35 - 249
Target Start/End: Original strand, 7305 - 7518
Alignment:
Q  35 ttcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaa 134  Q
    ||||||||||||  | |||||  |||||  |||| | |||||||| ||||||||| ||| || | || |||| |||||  ||||||||||||||||||||    
T  7305 ttcacgttttcgtgcgtaaaatccaaaccattaacccgttttcgatgccgttttcgcctacacgctcttgacacttagatctatcataatctacagaaaa 7404  T
Q  135 -ttcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatccc 232  Q
     ||||||||||||||||||        ||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||| ||    
T  7405 attcaagtttcaaccacccaaaaa---tcgatttcccaaacctcacataatctcttatttgcaaaaacgtttagactccgacttttcaagcgtaaattcc 7501  T
Q  233 aattttcatcaacccaa 249  Q
    ||||| |||| ||||||    
T  7502 aatttccatcgacccaa 7518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 42 - 245
Target Start/End: Original strand, 6908 - 7110
Alignment:
Q  42 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 141  Q
    |||||| | ||||| |||||| ||||| |  ||||||| ||||||||| ||| || | ||||||| |||||| |||||||||||||||  || |||||||    
T  6908 tttcgcgcgtaaaattcaaaccgttaacccattttcgatgccgttttcgcctacacgctcctgacacttagctctatcataatctacaacaatttcaagt 7007  T
Q  142 ttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttca 240  Q
     ||||||| ||        ||  ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  7008 ctcaaccatcccaagaa--tcattttcccaaacctcacataatcccttatttggaaaaacgtttagacaccgacttttcaaacgaaaatcccaattttca 7105  T
Q  241 tcaac 245  Q
    |||||    
T  7106 tcaac 7110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 1712 - 1480
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||||| ||||| ||||||| |||||||  ||||| ||||| | |||||||| ||| ||||| ||| || | ||||||  ||||||    
T  1712 gacaacatcagattttcaaccttcacattttcgcgcataaaacccaaaccgttaacccgttttcgatgccattttcgcctacacgctcctgagacttagc 1613  T
Q  114 cctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacacc 211  Q
     |||||||||||||| | |||| ||||||||||||||||         ||||||| ||||| ||||||| ||| ||||||||| |||||| || ||||||    
T  1612 tctatcataatctaccgaaaaactcaagtttcaaccacc----aaaaatcgatttcccaaaactcacatgatctcttatttgc-aaaacg-ttggacacc 1519  T
Q  212 gacttttcaagc-gaaaatcccaattttcatcaacccaa 249  Q
     ||||||||| |  ||||||||||||||||| |||||||    
T  1518 aacttttcaaacataaaatcccaattttcattaacccaa 1480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 21 - 242
Target Start/End: Complemental strand, 17686 - 17468
Alignment:
Q  21 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 120  Q
    ||||||||||||| ||||||||||||  |||||||||||||| ||||| | |||||||| ||||||||| ||| || | |||| ||  ||||||||||||    
T  17686 tcagattttcaaccttcacgttttcgaacataaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctaac-attagccctatca 17588  T
Q  121 taatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgactttt 218  Q
    ||||||||| ||| |||||||||||||||||||        ||||||| ||||||||||||||||| ||||||| | ||||||||| |||||| ||| ||    
T  17587 taatctacaaaaagattcaagtttcaaccaccc---aataatcgatttcccaaacctcacataatctcttattt-ccaaaacgttttgacaccaactatt 17492  T
Q  219 caagcgaaaatcccaattttcatc 242  Q
    ||| |||||||||| |||| ||||    
T  17491 caaacgaaaatccctatttccatc 17468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 2138 - 2060
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacc 246  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  2138 ccaaacctcacataatcccttatttgcaaaaacgtttagacactgacttttcaagcaaaaatcccaattttcatcaacc 2060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 168 - 245
Target Start/End: Complemental strand, 679 - 602
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaac 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  679 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatctcaatcttcatcaac 602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 67; Significance: 7e-30; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 108 - 249
Target Start/End: Original strand, 19405 - 19545
Alignment:
Q  108 cttagccctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgttta 205  Q
    |||||| |||||||||||||||||||| |||| |||||||||||||        ||| |||||| ||||| || ||||| ||||||||||||||||||||    
T  19405 cttagctctatcataatctacagaaaaattcatgtttcaaccacccaaaaa---tcggtttccataaccttacgtaatcacttatttgcaaaaacgttta 19501  T
Q  206 gacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  19502 gacactgacttttcaagcgaaaatcccaattttcatcaagccaa 19545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 175 - 249
Target Start/End: Original strand, 11154 - 11228
Alignment:
Q  175 tcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11154 tcacataatcacttattttcaaaaacgtttagacactgacttttcaagcgaaaatcccaattttcatcaacccaa 11228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 175 - 249
Target Start/End: Original strand, 5034 - 5108
Alignment:
Q  175 tcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||    
T  5034 tcacataatcacttattttcaaaaacgtttagacaccgacttttcatgtgaaaatctcaattttcatcaacccaa 5108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 147
Target Start/End: Complemental strand, 6819 - 6690
Alignment:
Q  19 catcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctat 118  Q
    |||||||||||| || |||| |||||||| |||||||||||||| |||||||||||||||| | |||||||| || |||||||||||| ||||||   ||    
T  6819 catcagattttctaccttcatgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgtcgttttcaactacatgttcctgacacttagcatcat 6720  T
Q  119 cataatctacag-aaaattcaagtttcaac 147  Q
    |||| ||||||| |||||||||||||||||    
T  6719 catattctacagaaaaattcaagtttcaac 6690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 35245 - 35326
Alignment:
Q  165 tttccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacc 246  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  35245 tttcgaaacctcacataatcccttatttgcaaaaacgtttagacaccaactttacaagcgaaaatcccaatttacatcaacc 35326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 249
Target Start/End: Complemental strand, 1038 - 825
Alignment:
Q  35 ttcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacag-aaa 133  Q
    |||||||||||||  ||||||| ||||| ||||| | |||||||| ||||||||| ||| ||   ||||||| |||||| |||||||||||||||| |||    
T  1038 ttcacgttttcgcgaataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacactcctgacacttagctctatcataatctacagaaaa 939  T
Q  134 attcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatccc 232  Q
    |||||||||||||||| |         || |||| ||||||||||||||||| ||| ||||||||||||||||||| || ||||||||| |  |||| ||    
T  938 attcaagtttcaaccaac---taaaaatctatttcccaaacctcacataatctcttgtttgcaaaaacgtttagactccaacttttcaaacataaattcc 842  T
Q  233 aattttcatcaacccaa 249  Q
    ||||| |||| ||||||    
T  841 aatttccatcgacccaa 825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 168 - 249
Target Start/End: Original strand, 21741 - 21822
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||| | |||||||    
T  21741 ccaaacctcacataatcccttatttgcaagaacgtttagacaccgtcttttcgagcgaaaatcccaattttcgtgaacccaa 21822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 117033 - 117266
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||| ||||||| | |||||||||| || | |||||||||||| ||||| | |||| ||| || |||||| ||| |  | ||||||| | ||||    
T  117033 gacaacatcaaattttcacccttcacgtttttgcgcctaaaaatcaaaccgttaacccgtttacgatgctgttttcgcctacgcgctcctgacacatagc 117132  T
Q  114 cctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagacacc 211  Q
     |||||| ||||||||||||| ||| ||||||||||||||         || |||| ||| |||||||||||| || |||||||||| | ||||||||||    
T  117133 tctatcacaatctacagaaaaattccagtttcaaccacccaaaata---cggtttctaaaacctcacataatcactcatttgcaaaa-catttagacacc 117228  T
Q  212 gacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  117229 gactcttcaagcgaaaatcccaattttcatcaatccaa 117266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 28 - 147
Target Start/End: Complemental strand, 1786 - 1666
Alignment:
Q  28 ttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatcta 127  Q
    |||||| ||||||||||||| |||||||||||||| ||||||| |||||||| ||||||||||||| | ||||| |||| |||||||||||   | | ||    
T  1786 ttcaactttcacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacttgttcatgacacttagccctatatcagtgta 1687  T
Q  128 cag-aaaattcaagtttcaac 147  Q
    ||| |||||||||||||||||    
T  1686 cagaaaaattcaagtttcaac 1666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 14209 - 14089
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| ||||||||||||||| |  |||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| || ||||||    
T  14209 gacaacatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttagc 14110  T
Q  114 cctatcataatctacagaaaa 134  Q
     ||||||||||  ||||||||    
T  14109 actatcataatgcacagaaaa 14089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 22146 - 22106
Alignment:
Q  38 acgttttcgctcataaaaatcaaacagttaatctgttttcg 78  Q
    |||||||||| |||||||||||||| ||||||| |||||||    
T  22146 acgttttcgcgcataaaaatcaaaccgttaatccgttttcg 22106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 147
Target Start/End: Complemental strand, 23305 - 23192
Alignment:
Q  35 ttcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacag-aaa 133  Q
    ||||||||||||| | |||||| ||||| ||||||| |||||||| ||||||||||||| | ||||| |||| |||||||||||| |||| | ||| |||    
T  23305 ttcacgttttcgcgcgtaaaaaccaaaccgttaatccgttttcgatgccgttttcacctacgtgttcatgacacttagccctatcttaatgtgcagaaaa 23206  T
Q  134 attcaagtttcaac 147  Q
    ||||||||||||||    
T  23205 attcaagtttcaac 23192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 168 - 249
Target Start/End: Original strand, 29741 - 29821
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    |||||||||||||| || |||||||||||||  |||||||||||||||||||||| |||||||||||||||||| |||||||    
T  29741 ccaaacctcacatagtctcttatttgcaaaat-gtttagacaccgacttttcaagggaaaatcccaattttcattaacccaa 29821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 168 - 249
Target Start/End: Original strand, 35206 - 35286
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 249  Q
    |||||||||||||| || |||||||||||||  |||||||||||||||||||||| |||||||||||||||||| |||||||    
T  35206 ccaaacctcacatagtctcttatttgcaaaat-gtttagacaccgacttttcaagggaaaatcccaattttcattaacccaa 35286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 147
Target Start/End: Original strand, 146031 - 146166
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  ||||||||||||| | |||||| ||||| ||||| | |||||||| ||||||||| ||| || | ||||||| |||||    
T  146031 gacaacatcagattttccaattttcacgttttcgcgcgtaaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttag 146130  T
Q  113 ccctatcataatctacag-aaaattcaagtttcaac 147  Q
    ||||||| |||| ||||| |||||||||||||||||    
T  146131 ccctatcttaatgtacagaaaaattcaagtttcaac 146166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 8744 - 8976
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| |||||||||||| || ||||||||||||| |||||||| ||||| ||||| | |||||||| |||||||||  || || | ||||||  | ||||    
T  8744 gacagcatcagattttcgaccttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgtctacacgctcctgagacatagc 8843  T
Q  114 cctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacacc 211  Q
     |||||||||||||| | |||| |||||||||||| |||         ||||||| ||||| ||||||| ||| ||||||||| |||||| || ||||||    
T  8844 tctatcataatctactgaaaaactcaagtttcaactacc----aaaaatcgatttcccaaaactcacatgatctcttatttgc-aaaacg-ttggacacc 8937  T
Q  212 gacttttcaagc-gaaaatcccaattttcatcaacccaa 249  Q
     ||||||||| |  ||||||||||||||||| |||||||    
T  8938 aacttttcaaacataaaatcccaattttcattaacccaa 8976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 6592 - 6667
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttc 89  Q
    |||| |||||||||||| || ||||||||||||| |||||||| ||||| ||||| | |||||||| |||||||||    
T  6592 gacagcatcagattttcgaccttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcgatgccgttttc 6667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 147
Target Start/End: Complemental strand, 10773 - 10652
Alignment:
Q  27 tttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatct 126  Q
    ||||||| | |||||||| || |||||||||||||| ||||||| ||||| || ||||||||||||| | ||||| |||| |||||||||||| |||| |    
T  10773 tttcaacctccacgtttttgcgcataaaaatcaaaccgttaatccgtttttgatgccgttttcacctacttgttcatgacacttagccctatcttaatgt 10674  T
Q  127 acag-aaaattcaagtttcaac 147  Q
     ||| |||| ||||||||||||    
T  10673 gcagaaaaagtcaagtttcaac 10652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 10321 - 10209
Alignment:
Q  22 cagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcat 121  Q
    ||||||||| |  |||||||||||   |||||||||||||| ||||||| |||||||| ||||||||||||| |||| |||| || |||||| |||||||    
T  10321 cagattttccaatttcacgttttcctgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacatgctcctaacacttagcactatcat 10222  T
Q  122 aatctacagaaaa 134  Q
    |||  ||||||||    
T  10221 aatgcacagaaaa 10209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 223
Target Start/End: Original strand, 6682 - 6860
Alignment:
Q  42 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 141  Q
    |||||| | ||||| |||||| ||||||| | ||| || ||| ||||| ||| ||   ||||||| ||| || ||||||||||||||||  | |||||||    
T  6682 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgccattttcgcctacactctcctgacacttggctctatcataatctacagctatttcaagt 6781  T
Q  142 ttcaaccacccnnnnnnnntcgatttccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagc 223  Q
     ||| ||||||        |||||||||||||||||||||||| ||| |||| |||||||||||||| ||||||||||||||    
T  6782 ctcatccaccccaaaa---tcgatttccaaacctcacataatctcttgtttggaaaaacgtttagactccgacttttcaagc 6860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 46; Significance: 2e-17; HSPs: 4)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 147
Target Start/End: Original strand, 4021 - 4134
Alignment:
Q  35 ttcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacag-aaa 133  Q
    ||||||||||||| | |||||| ||||| ||||| | |||||||| ||||||||| ||| || | || |||| |||||||||||| |||| ||||| |||    
T  4021 ttcacgttttcgcgcgtaaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcttgacacttagccctatcttaatgtacagaaaa 4120  T
Q  134 attcaagtttcaac 147  Q
    ||||||||||||||    
T  4121 attcaagtttcaac 4134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 147
Target Start/End: Original strand, 8635 - 8748
Alignment:
Q  35 ttcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacag-aaa 133  Q
    ||||||||||||| | |||||| ||||| ||||| | |||||||| ||||||||| ||| || | || |||| |||||||||||| |||| ||||| |||    
T  8635 ttcacgttttcgcgcgtaaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcttgacacttagccctatcttaatgtacagaaaa 8734  T
Q  134 attcaagtttcaac 147  Q
    ||||||||||||||    
T  8735 attcaagtttcaac 8748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 7610 - 7665
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagc 223  Q
    ||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||    
T  7610 ccaaacctcacataatctcttgtttgcaaaaacgtttagactccgacttttcaagc 7665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 12224 - 12279
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagc 223  Q
    ||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||    
T  12224 ccaaacctcacataatctcttgtttgcaaaaacgtttagactccgacttttcaagc 12279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 147
Target Start/End: Original strand, 6629 - 6742
Alignment:
Q  35 ttcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacag-aaa 133  Q
    ||||||||||||| | |||||| ||||| ||||| | |||||||| ||||||||| ||| || | || |||| |||||||||||| |||| ||||| |||    
T  6629 ttcacgttttcgcgcgtaaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcttgacacttagccctatcttaatgtacagaaaa 6728  T
Q  134 attcaagtttcaac 147  Q
    ||||||||||||||    
T  6729 attcaagtttcaac 6742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 10219 - 10274
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagc 223  Q
    ||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||    
T  10219 ccaaacctcacataatctcttgtttgcaaaaacgtttagactccgacttttcaagc 10274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 147
Target Start/End: Original strand, 55035 - 55148
Alignment:
Q  35 ttcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacag-aaa 133  Q
    ||||||||||||| |||||||||||||| |||||||||||| ||| ||||||||||||| | | ||| |||| ||| ||||||||  | | || || |||    
T  55035 ttcacgttttcgcgcataaaaatcaaaccgttaatctgtttccgatgccgttttcacctacgttttcatgacacttggccctatctcagtgtaaagaaaa 55134  T
Q  134 attcaagtttcaac 147  Q
    ||||||||||||||    
T  55135 attcaagtttcaac 55148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 249
Target Start/End: Original strand, 5489 - 5720
Alignment:
Q  14 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 113  Q
    |||| |||||||||||| |  ||||||||||||  |||||||| ||||| ||||| | |||||||| |||||||||  || |||| ||||||  | ||||    
T  5489 gacaacatcagattttcgaacttcacgttttcgagcataaaaaccaaaccgttaacccgttttcgatgccgttttcgtctacatgctcctgagacatagc 5588  T
Q  114 cctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacacc 211  Q
     |||||||||||||| | |||| |||||||||||| |||         ||||||| ||||| ||||||| ||| ||||||||| ||||||||  | ||||    
T  5589 tctatcataatctaccgaaaaactcaagtttcaactacc----aaaaatcgatttcccaaaactcacatgatctcttatttgc-aaaacgtt--ggcacc 5681  T
Q  212 gacttttcaagc-gaaaatcccaattttcatcaacccaa 249  Q
     ||||||||| |  ||||||||||||||||| |||||||    
T  5682 aacttttcaaacataaaatcccaattttcattaacccaa 5720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 147
Target Start/End: Complemental strand, 822 - 687
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  || ||||||| || | |||||| ||||||||||||| ||||| || ||||||||| ||| || | ||||||| |||||    
T  822 gacaacatcagattttccaatttttacgtttttgcacgtaaaaaccaaacagttaatccgttttggatgccgttttcgcctacacgctcctgacacttag 723  T
Q  113 ccctatcataatctacag-aaaattcaagtttcaac 147  Q
    | ||||| |||| ||||| |||||||||||||||||    
T  722 ctctatcttaatgtacagaaaaattcaagtttcaac 687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 119
Target Start/End: Original strand, 5373 - 5479
Alignment:
Q  14 gacatcatcagatttt-caacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| ||||||||||| |||  ||||||||||||| |||||||| ||||| ||||| | |||||| | ||||||||  ||| |||||||||||| |||||    
T  5373 gacaacatcagatttttcaattttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcaatgccgtttttgcctacatgttcctgacacttag 5472  T
Q  113 ccctatc 119  Q
    | |||||    
T  5473 ctctatc 5479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 7361 - 7240
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 112  Q
    |||| |||||||||||| ||  ||||||||||||| | |||||| |||||  ||||||  ||||||| | ||||||||||| |||| |||| || |||||    
T  7361 gacaacatcagattttccaattttcacgttttcgcgcgtaaaaaccaaacttttaatccattttcgatgtcgttttcacctacatgctcctaacacttag 7262  T
Q  113 ccctatcataatctacagaaaa 134  Q
    | ||||||||||  ||||||||    
T  7261 cactatcataatgcacagaaaa 7240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 149
Target Start/End: Original strand, 28182 - 28289
Alignment:
Q  42 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 141  Q
    |||||| ||||||| |||||| ||||||| | |||  | ||||||||| ||| |||| ||||||| |||| | ||||||||||||||||| | || ||||    
T  28182 tttcgcgcataaaattcaaaccgttaatcggattttaatgccgttttcgcctacatgctcctgacacttaactctatcataatctacagagatttaaagt 28281  T
Q  142 ttcaacca 149  Q
     |||||||    
T  28282 ctcaacca 28289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 242
Target Start/End: Original strand, 51966 - 52039
Alignment:
Q  168 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatc 242  Q
    ||||||||||||||||| ||||||||| |||||||||| ||  ||||||||||| ||||||  ||||||| ||||    
T  51966 ccaaacctcacataatctcttatttgc-aaaacgtttatacttcgacttttcaaacgaaaactccaatttccatc 52039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1957 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1957
Description:

Target: scaffold1957; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 173 - 120
Alignment:
Q  100 tcctgactcttagccctatcataatctacag-aaaattcaagtttcaaccaccc 152  Q
    ||||||| |||||| ||| |||||||||||| ||||||||||||||||||||||    
T  173 tcctgacacttagctctaacataatctacagaaaaattcaagtttcaaccaccc 120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 245
Target Start/End: Complemental strand, 6079 - 6036
Alignment:
Q  202 tttagacaccgacttttcaagcgaaaatcccaattttcatcaac 245  Q
    |||||||||| ||||||||| ||||||||||||| |||||||||    
T  6079 tttagacaccaacttttcaaacgaaaatcccaatcttcatcaac 6036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 147003 - 147091
Alignment:
Q  14 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttc 101  Q
    |||| |||||||||||| ||  ||||||||||||| | |||||  ||||  ||||| | |||||||| ||||||||||||| |||||||    
T  147003 gacaacatcagattttccaattttcacgttttcgcacgtaaaatccaaatcgttaacccgttttcgatgccgttttcacctacatgttc 147091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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