View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0732_low_8 (Length: 261)

Name: NF0732_low_8
Description: NF0732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0732_low_8
NF0732_low_8
[»] scaffold0170 (1 HSPs)
scaffold0170 (3-261)||(34076-34334)
[»] scaffold0302 (2 HSPs)
scaffold0302 (1-261)||(7144-7404)
scaffold0302 (1-261)||(202-462)
[»] scaffold0610 (1 HSPs)
scaffold0610 (1-261)||(6984-7244)
[»] chr8 (18 HSPs)
chr8 (1-261)||(20650850-20651110)
chr8 (1-261)||(16875590-16875850)
chr8 (1-261)||(22436329-22436589)
chr8 (1-261)||(21848832-21849092)
chr8 (1-261)||(21195035-21195294)
chr8 (1-261)||(23155537-23155795)
chr8 (1-261)||(23902190-23902450)
chr8 (1-76)||(16414302-16414377)
chr8 (71-225)||(31569407-31569561)
chr8 (95-222)||(20390164-20390291)
chr8 (26-114)||(19869866-19869954)
chr8 (68-211)||(20008483-20008626)
chr8 (68-219)||(22372999-22373150)
chr8 (68-258)||(21323841-21324030)
chr8 (68-150)||(21927565-21927647)
chr8 (215-261)||(22317207-22317253)
chr8 (68-222)||(28982976-28983130)
chr8 (68-222)||(28988195-28988349)
[»] chr3 (30 HSPs)
chr3 (1-261)||(25767907-25768167)
chr3 (1-261)||(6151144-6151404)
chr3 (1-261)||(8272690-8272950)
chr3 (1-261)||(30139395-30139655)
chr3 (1-261)||(30148946-30149206)
chr3 (1-261)||(13965643-13965904)
chr3 (1-261)||(15611692-15611952)
chr3 (1-261)||(15948761-15949021)
chr3 (173-261)||(6710880-6710968)
chr3 (68-225)||(14088298-14088455)
chr3 (68-258)||(11950255-11950445)
chr3 (68-225)||(13970467-13970624)
chr3 (68-225)||(11889638-11889795)
chr3 (47-156)||(13318828-13318937)
chr3 (68-225)||(15261245-15261402)
chr3 (132-216)||(55498486-55498570)
chr3 (71-186)||(13943688-13943803)
chr3 (68-222)||(28755946-28756100)
chr3 (215-261)||(55514237-55514283)
chr3 (77-225)||(41179147-41179295)
chr3 (71-219)||(44778878-44779026)
chr3 (86-225)||(15723310-15723449)
chr3 (71-153)||(10418395-10418477)
chr3 (89-119)||(16880084-16880114)
chr3 (215-261)||(18915315-18915361)
chr3 (68-222)||(47125572-47125726)
chr3 (50-255)||(13254275-13254480)
chr3 (68-153)||(18132693-18132778)
chr3 (86-154)||(15014132-15014200)
chr3 (68-112)||(17188112-17188156)
[»] chr1 (16 HSPs)
chr1 (1-261)||(20927029-20927289)
chr1 (1-261)||(20829516-20829776)
chr1 (1-261)||(41215980-41216240)
chr1 (1-142)||(20527147-20527288)
chr1 (1-261)||(21201003-21201263)
chr1 (1-84)||(22133880-22133963)
chr1 (71-224)||(20854954-20855107)
chr1 (68-222)||(31538188-31538342)
chr1 (68-222)||(37679094-37679248)
chr1 (68-222)||(48424918-48425072)
chr1 (68-222)||(52987786-52987940)
chr1 (71-222)||(20296426-20296577)
chr1 (68-258)||(20834091-20834281)
chr1 (68-157)||(16378174-16378263)
chr1 (68-144)||(21743743-21743819)
chr1 (1-37)||(35930949-35930985)
[»] scaffold0120 (1 HSPs)
scaffold0120 (1-261)||(24167-24427)
[»] scaffold0077 (2 HSPs)
scaffold0077 (1-261)||(26321-26581)
scaffold0077 (215-260)||(25270-25315)
[»] scaffold0092 (1 HSPs)
scaffold0092 (1-256)||(103-358)
[»] chr2 (19 HSPs)
chr2 (1-260)||(24568260-24568519)
chr2 (1-261)||(24829780-24830040)
chr2 (1-261)||(22760161-22760421)
chr2 (1-261)||(22279696-22279956)
chr2 (1-261)||(25130200-25130460)
chr2 (4-260)||(10037927-10038183)
chr2 (4-260)||(10098312-10098568)
chr2 (68-222)||(23112366-23112520)
chr2 (68-193)||(23098677-23098802)
chr2 (68-157)||(30010843-30010932)
chr2 (68-222)||(1065381-1065535)
chr2 (71-225)||(27789367-27789521)
chr2 (86-157)||(30209594-30209665)
chr2 (215-261)||(12639039-12639085)
chr2 (68-258)||(23278370-23278560)
chr2 (71-219)||(12575986-12576134)
chr2 (68-255)||(24818889-24819076)
chr2 (78-157)||(27208841-27208920)
chr2 (68-222)||(31832288-31832442)
[»] scaffold0225 (1 HSPs)
scaffold0225 (1-261)||(25385-25645)
[»] scaffold0162 (2 HSPs)
scaffold0162 (1-261)||(14899-15159)
scaffold0162 (1-261)||(11229-11489)
[»] scaffold0076 (2 HSPs)
scaffold0076 (1-261)||(42249-42509)
scaffold0076 (68-225)||(31799-31956)
[»] chr7 (26 HSPs)
chr7 (1-261)||(7825849-7826109)
chr7 (1-261)||(27105835-27106095)
chr7 (1-261)||(27172230-27172490)
chr7 (1-261)||(17925599-17925859)
chr7 (1-261)||(4441877-4442137)
chr7 (1-261)||(13457984-13458244)
chr7 (1-126)||(13378969-13379092)
chr7 (18-261)||(17143354-17143597)
chr7 (1-261)||(15716964-15717224)
chr7 (68-225)||(19614661-19614818)
chr7 (129-255)||(11770430-11770556)
chr7 (68-193)||(11386535-11386660)
chr7 (68-225)||(48813380-48813537)
chr7 (71-219)||(14139671-14139819)
chr7 (71-219)||(23503979-23504127)
chr7 (68-255)||(19149167-19149354)
chr7 (68-255)||(20748566-20748753)
chr7 (68-258)||(13675405-13675595)
chr7 (71-219)||(18052062-18052210)
chr7 (68-150)||(14262351-14262433)
chr7 (68-222)||(26092904-26093058)
chr7 (26-114)||(39232-39320)
chr7 (71-222)||(26116699-26116850)
chr7 (68-222)||(11301319-11301473)
chr7 (128-222)||(49154290-49154384)
chr7 (68-153)||(12204906-12204991)
[»] chr6 (24 HSPs)
chr6 (1-261)||(1647011-1647271)
chr6 (1-261)||(16380570-16380830)
chr6 (1-261)||(16648166-16648426)
chr6 (1-261)||(14130293-14130553)
chr6 (1-261)||(23998072-23998332)
chr6 (1-261)||(16099833-16100099)
chr6 (92-261)||(23026013-23026182)
chr6 (153-261)||(18836257-18836365)
chr6 (197-261)||(19985809-19985873)
chr6 (68-225)||(19881158-19881315)
chr6 (197-261)||(18578033-18578097)
chr6 (83-258)||(34643865-34644040)
chr6 (41-193)||(14643721-14643877)
chr6 (68-213)||(23086035-23086180)
chr6 (17-65)||(23025959-23026007)
chr6 (114-221)||(19487582-19487689)
chr6 (68-219)||(25769710-25769861)
chr6 (215-261)||(16234852-16234898)
chr6 (68-261)||(14378180-14378373)
chr6 (68-261)||(14379730-14379923)
chr6 (71-219)||(28281080-28281228)
chr6 (86-213)||(23080341-23080468)
chr6 (215-261)||(21929028-21929074)
chr6 (68-222)||(24366275-24366429)
[»] chr5 (18 HSPs)
chr5 (1-261)||(23507558-23507818)
chr5 (1-261)||(21935422-21935682)
chr5 (1-261)||(24583084-24583344)
chr5 (71-157)||(20777891-20777977)
chr5 (68-154)||(21409133-21409219)
chr5 (68-225)||(21679079-21679236)
chr5 (71-153)||(20823435-20823517)
chr5 (68-258)||(23473122-23473312)
chr5 (215-261)||(23505118-23505164)
chr5 (83-224)||(22463862-22464003)
chr5 (71-219)||(17267638-17267786)
chr5 (11-147)||(20250528-20250664)
chr5 (68-222)||(24796698-24796852)
chr5 (71-153)||(28893246-28893328)
chr5 (71-153)||(28914717-28914799)
chr5 (71-153)||(28922072-28922154)
chr5 (71-153)||(28929985-28930067)
chr5 (146-258)||(20466478-20466590)
[»] scaffold0876 (2 HSPs)
scaffold0876 (13-260)||(1013-1260)
scaffold0876 (215-261)||(4525-4571)
[»] scaffold0387 (1 HSPs)
scaffold0387 (5-261)||(16049-16305)
[»] scaffold0021 (3 HSPs)
scaffold0021 (4-261)||(21905-22161)
scaffold0021 (4-261)||(31481-31737)
scaffold0021 (28-261)||(7205-7438)
[»] scaffold0266 (1 HSPs)
scaffold0266 (1-261)||(7916-8176)
[»] scaffold0218 (2 HSPs)
scaffold0218 (1-261)||(2007-2267)
scaffold0218 (1-168)||(26411-26578)
[»] chr4 (13 HSPs)
chr4 (1-261)||(15291210-15291470)
chr4 (1-222)||(12340917-12341138)
chr4 (77-222)||(8707910-8708055)
chr4 (128-255)||(8322955-8323082)
chr4 (71-225)||(51604914-51605068)
chr4 (26-258)||(14696076-14696308)
chr4 (71-222)||(44659988-44660139)
chr4 (68-222)||(3262913-3263067)
chr4 (215-261)||(9292795-9292841)
chr4 (68-255)||(14849225-14849412)
chr4 (68-219)||(15001484-15001635)
chr4 (68-219)||(15323219-15323370)
chr4 (215-261)||(14999275-14999321)
[»] scaffold0124 (1 HSPs)
scaffold0124 (1-261)||(5861-6123)
[»] scaffold1488 (1 HSPs)
scaffold1488 (1-261)||(858-1117)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-261)||(8881-9141)
[»] scaffold0008 (3 HSPs)
scaffold0008 (1-261)||(132544-132804)
scaffold0008 (136-261)||(25817-25942)
scaffold0008 (1-81)||(25938-26018)
[»] scaffold0561 (1 HSPs)
scaffold0561 (1-261)||(7060-7316)
[»] scaffold0692 (1 HSPs)
scaffold0692 (1-261)||(1939-2190)
[»] scaffold0467 (1 HSPs)
scaffold0467 (1-213)||(1676-1888)
[»] scaffold0635 (1 HSPs)
scaffold0635 (4-260)||(8887-9143)
[»] scaffold0369 (1 HSPs)
scaffold0369 (12-108)||(6888-6984)
[»] scaffold0269 (1 HSPs)
scaffold0269 (197-261)||(2255-2319)
[»] scaffold0462 (1 HSPs)
scaffold0462 (1-74)||(2117-2190)
[»] scaffold0730 (1 HSPs)
scaffold0730 (68-258)||(123-313)
[»] scaffold0244 (1 HSPs)
scaffold0244 (197-261)||(25028-25092)
[»] scaffold0028 (1 HSPs)
scaffold0028 (68-225)||(48636-48793)
[»] scaffold0083 (1 HSPs)
scaffold0083 (68-255)||(9156-9343)
[»] scaffold0016 (1 HSPs)
scaffold0016 (68-219)||(176466-176617)
[»] scaffold0011 (1 HSPs)
scaffold0011 (68-255)||(24655-24842)
[»] scaffold0585 (1 HSPs)
scaffold0585 (68-219)||(5211-5362)
[»] scaffold0102 (1 HSPs)
scaffold0102 (26-220)||(41728-41922)
[»] scaffold0090 (2 HSPs)
scaffold0090 (68-186)||(20915-21033)
scaffold0090 (68-186)||(25077-25195)
[»] scaffold0074 (1 HSPs)
scaffold0074 (68-258)||(5106-5295)
[»] scaffold0058 (2 HSPs)
scaffold0058 (68-193)||(76482-76614)
scaffold0058 (87-153)||(27389-27455)
[»] scaffold0020 (1 HSPs)
scaffold0020 (68-258)||(99684-99874)
[»] scaffold0004 (1 HSPs)
scaffold0004 (72-222)||(201594-201744)
[»] scaffold0719 (1 HSPs)
scaffold0719 (1-54)||(4785-4838)
[»] scaffold0509 (1 HSPs)
scaffold0509 (66-219)||(10861-11014)
[»] scaffold0029 (1 HSPs)
scaffold0029 (68-225)||(114586-114743)
[»] scaffold0309 (1 HSPs)
scaffold0309 (68-219)||(11826-11977)
[»] scaffold0310 (1 HSPs)
scaffold0310 (215-261)||(13093-13139)
[»] scaffold0010 (1 HSPs)
scaffold0010 (68-222)||(40455-40609)
[»] scaffold0001 (1 HSPs)
scaffold0001 (68-258)||(495012-495202)
[»] scaffold0865 (1 HSPs)
scaffold0865 (68-193)||(2394-2519)
[»] scaffold0133 (1 HSPs)
scaffold0133 (68-193)||(29407-29532)
[»] scaffold0379 (1 HSPs)
scaffold0379 (71-255)||(6014-6198)
[»] scaffold0037 (1 HSPs)
scaffold0037 (137-261)||(115172-115296)
[»] scaffold0017 (1 HSPs)
scaffold0017 (86-225)||(195627-195766)
[»] scaffold0007 (1 HSPs)
scaffold0007 (86-154)||(84659-84727)
[»] scaffold1486 (1 HSPs)
scaffold1486 (214-261)||(165-212)
[»] scaffold0192 (1 HSPs)
scaffold0192 (26-153)||(28624-28751)
[»] scaffold0089 (1 HSPs)
scaffold0089 (71-222)||(14838-14989)
[»] scaffold0072 (1 HSPs)
scaffold0072 (83-258)||(53039-53214)
[»] scaffold0040 (1 HSPs)
scaffold0040 (66-225)||(16904-17063)
[»] scaffold0026 (1 HSPs)
scaffold0026 (68-123)||(50939-50994)
[»] scaffold0023 (1 HSPs)
scaffold0023 (214-261)||(54210-54257)
[»] scaffold0018 (2 HSPs)
scaffold0018 (68-255)||(10863-11050)
scaffold0018 (68-255)||(17055-17242)
[»] scaffold1208 (1 HSPs)
scaffold1208 (68-162)||(1811-1905)
[»] scaffold0348 (1 HSPs)
scaffold0348 (68-122)||(9996-10050)
[»] scaffold0335 (1 HSPs)
scaffold0335 (215-261)||(10979-11025)
[»] scaffold2111 (1 HSPs)
scaffold2111 (68-117)||(709-758)
[»] scaffold0827 (1 HSPs)
scaffold0827 (26-99)||(5259-5332)
[»] scaffold0293 (1 HSPs)
scaffold0293 (77-258)||(14462-14643)
[»] scaffold0080 (1 HSPs)
scaffold0080 (86-255)||(11379-11548)
[»] scaffold1715 (1 HSPs)
scaffold1715 (71-219)||(985-1133)
[»] scaffold0476 (1 HSPs)
scaffold0476 (68-112)||(1667-1711)
[»] scaffold0149 (2 HSPs)
scaffold0149 (86-258)||(5490-5662)
scaffold0149 (86-258)||(9921-10093)
[»] scaffold0054 (1 HSPs)
scaffold0054 (71-219)||(64633-64781)
[»] scaffold0006 (1 HSPs)
scaffold0006 (26-186)||(103299-103459)


Alignment Details
Target: scaffold0170 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 3 - 261
Target Start/End: Complemental strand, 34334 - 34076
Alignment:
Q  3 ccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaatag 102  Q
    ||||||||||||| ||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34334 ccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaatag 34235  T
Q  103 aatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaaggatt 202  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||  ||||||    
T  34234 aatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgaggatt 34135  T
Q  203 gtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||||||| ||||||||||||||||  ||||||||||||||||| |||||    
T  34134 gtgttgcaagtcttgaaagagaaccagttatgtgcaaagttgtctaagtgtgaattttg 34076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 201; Significance: 1e-110; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 7404 - 7144
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||||||||| |||||||||||||| || ||||| || ||||||    
T  7404 atccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgtcatttggagtatctaatgcgccaggtgtttttatggaatacatgaat 7305  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||  ||||    
T  7304 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgagga 7205  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  7204 ttgtgttgcaagtcttgaaagagaaccagttatgtgctaagttgtctaagtgtgagttttg 7144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 462 - 202
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||||||||| |||||||||||||| || ||||| || ||||||    
T  462 atccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgtcatttggagtatctaatgcgccaggtgtttttatggaatacatgaat 363  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||  ||||    
T  362 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgagga 263  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||| ||||| |||||||||||||||| |||||| |||||||||||||||||    
T  262 ttgtgttgcaagttttgaaagagaaccagttatgtgctaagttttctaagtgtgagttttg 202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 6984 - 7244
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  6984 atccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaatgcaccaggtgtcttcattgagtatatgaat 7083  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    | |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||| | |||||| ||||||||||||||||  ||||    
T  7084 aaaatatttcatccttatctggaccgttttatggtggtgtttataaatgatattttggtgtatttgaagtctgaggaggagcatgctgagcatttgagga 7183  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7184 ttgtgttgcaagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttg 7244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 197; Significance: 1e-107; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 20650850 - 20651110
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  20650850 atccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtcttcatagagtatatgaat 20650949  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||| |||||||| |||||||  ||||    
T  20650950 agaatattttatccttatctggaccgttttgtagtggtgttcatagatgatattttggtgtattcgaaatctgaggaggagcatgccgagcatttgagga 20651049  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  20651050 ttgtgttgcaagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagatttg 20651110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 16875590 - 16875850
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| ||||| || ||||||    
T  16875590 atccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaat 16875689  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||||||  ||||    
T  16875690 agaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgagga 16875789  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||||||||| ||||||||||| ||||  |||||||||||||||||||||||    
T  16875790 ttgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttg 16875850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 22436589 - 22436329
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||||||||||||||| | ||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||| || ||||||    
T  22436589 atccaaaaccgcgttccgaacaaggtatggacagtatgagtattctgtgatgccatttggagtatccaatgcgccaggtgtcttaatggaataaatgaat 22436490  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||  |||||||||||||||  ||||    
T  22436489 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggagaagcatgctgagcatttgagga 22436390  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    | ||||||| |||||| |||||||| |||||||||| ||||||||||||||||||||||||    
T  22436389 tagtgttgcgagtcttaaaggagaatcagttatgtgctaagttgtctaagtgtgagttttg 22436329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 21848832 - 21849092
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||| ||||||||||| | ||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| ||||| || ||||||    
T  21848832 atccaaaactgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaat 21848931  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||||||  ||||    
T  21848932 agaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgagga 21849031  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||||||||| ||||||||||| ||||  |||||||||||||| ||||||||    
T  21849032 ttgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgggagttttg 21849092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 21195035 - 21195294
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||||| ||||||||| | ||||||||||||| |||||| |||||||| |||||||||||  |||| |||||||  ||||||||| |||||||||    
T  21195035 atccaaaaccgtgttccgaacaaggtatggacactatgagtattttgtgatgcaatttggagtatataatgtgccaggta-cttcatggaatatatgaat 21195133  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||| ||||||||||||||||  ||||    
T  21195134 agaatatttcatccttatctggaccgttttgtggtggtatttatagatgctattttggtgtattcgaaatctgaggaggagcatgctgagcatttgagga 21195233  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||    
T  21195234 ttgtgttgcaagtattgaaggagaaccagttatgtgctaagttgtctaagagtgagttttg 21195294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 23155537 - 23155795
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||||||||||||||||| |||||||||||   |||||| ||||||||||||||||| | ||||||||| ||||||||||||||| |||||||||    
T  23155537 atccaaaaccgcgttccgaacgaggtatggacactg--agtattctgtgatgccatttggagcacccaatgcgctaggtgtcttcatggaatatatgaat 23155634  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||| | |||||| || |||| ||||||||  ||||    
T  23155635 agaatatttcatccttatttggaccgttttgtggtggtgtttattgatgatattttagtgtattcgaagtctgaggaggatcatgttgagcatttgagga 23155734  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    |||||||| ||||||||||||| || |||||||||| ||||||||||||||||||||||||    
T  23155735 ttgtgttgtaagtcttgaaggataatcagttatgtgctaagttgtctaagtgtgagttttg 23155795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 23902450 - 23902190
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||||||||||| ||||| | ||||||||||| |||||| ||||||||||||||||||||||||||| | ||||||||||||||| |||||||||    
T  23902450 atccaaaaccgcgttccaaacgaggcatggacactatgagtattctgtgatgccatttggagtatccaatgcactaggtgtcttcatggaatatatgaat 23902351  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    |||||||||||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||| | |||||| ||||||||||||||||  ||||    
T  23902350 agaatatttcatccttttctggaccgttttatggtagtgtttatcgatgatattttggtgtattcgaagtttgaggaggagcatgctgagcatttgagga 23902251  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    || ||||||  ||||||||||| ||  |||| |||| ||||| ||| ||||| ||| ||||    
T  23902250 ttatgttgcgtgtcttgaaggaaaattagttgtgtgctaagtggtcgaagtgcgagctttg 23902190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 16414377 - 16414302
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgcca 76  Q
    |||||||||||| |||||||| | ||||||||||||| |||||| |||||||||||||||| ||||||||||||||    
T  16414377 atccaaaaccgcattccgaacaaggtatggacactatgagtattctgtgatgccatttggaatatccaatgcgcca 16414302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 225
Target Start/End: Original strand, 31569407 - 31569561
Alignment:
Q  71 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaat 170  Q
    ||||| ||||| |||||||||||||||||| |||| |||||| ||| ||||||    || |||||||| ||||| ||||||||| || | ||||||||      
T  31569407 gcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattcgaaga 31569506  T
Q  171 atgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaa 225  Q
     ||| ||||||||||| || |||   || |||||| ||||||| ||||| |||||    
T  31569507 ctgaagaagagcatgcagaacatctgagaattgtgctgcaagttttgaaagagaa 31569561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 222
Target Start/End: Complemental strand, 20390291 - 20390164
Alignment:
Q  95 atgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcatt 194  Q
    ||||||||||| || ||| |||   |||| || |||||||| |||||||| ||||| || ||| | ||||| ||   ||| ||||||||||| |||||||    
T  20390291 atgaatagaattttccatgctttcttggatcggtttgtggttgtgtttattgatgacatcttgatttattctaagactgaagaagagcatgcggagcatt 20390192  T
Q  195 aaaggattgtgttgcaagtcttgaagga 222  Q
     || ||||||||||||||| ||||||||    
T  20390191 taaagattgtgttgcaagtgttgaagga 20390164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 19869954 - 19869866
Alignment:
Q  26 tatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaatagaatatttcatcc 114  Q
    ||||| || ||| ||||||  |||||||| |||||||| ||||| |||||||| || || |||||||||||||| ||||| || |||||    
T  19869954 tatggtcattatgagtattcagtgatgccttttggagtgtccaacgcgccaggagtgtttatggagtatatgaacagaattttccatcc 19869866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 211
Target Start/End: Original strand, 20008483 - 20008626
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| || |||||||||||||| ||||| || ||| ||||||||||    |||||||| |||||||  ||||||||  |  | ||||| |    
T  20008483 aatgcgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttagtgatgatatcctaatttattcta 20008582  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaa 211  Q
    |  |||| ||||||||||| ||||||   | |||||||||||||    
T  20008583 agaatgaagaagagcatgcagagcatatgaagattgtgttgcaa 20008626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 219
Target Start/End: Complemental strand, 22373150 - 22372999
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| ||||||||||| |||||| |||| || ||| ||||||||||    |||||||| |||||||  ||||||||  |  | ||||| |    
T  22373150 aatgcgcctggtgtgttcatggagtacatgaattgaattttccatgcttatctggataaatttgtggttgtgtttactgatgatatcctaatttattcta 22373051  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaa 219  Q
    |  |||| ||||| ||||| ||||||   | ||||||||||||||| |||||    
T  22373050 agaatgaagaagaccatgcagagcatcttaagattgtgttgcaagtgttgaa 22372999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 258
Target Start/End: Original strand, 21323841 - 21324030
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| |||||||||||||||||  |||| || ||| |||| |||||    || ||||| |||||||| ||||| ||| || | ||||| |    
T  21323841 aatgcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttacctggataaattcgtggttgtgtttatcgatgacattctgatctattcaa 21323940  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagtt 258  Q
    |   ||| ||||||||||| || |||   | ||||||||||||| | ||||| |||||  |||| | || ||||||||| |||||||||||    
T  21323941 agactgaagaagagcatgcagaacatctgaagattgtgttgcaaattttgaaagagaa-aagttgtatgctaagttgtcgaagtgtgagtt 21324030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 21927647 - 21927565
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatga 150  Q
    |||||||| ||||| || |||||||||||||| ||||| || ||| ||||||||||    |||||||| |||||||| |||||    
T  21927647 aatgcgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttattgatga 21927565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 261
Target Start/End: Complemental strand, 22317253 - 22317207
Alignment:
Q  215 ttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||| | |||||||||| ||||||||| ||||||||||||||    
T  22317253 ttgaaggaggatcagttatgtgctaagttgtcgaagtgtgagttttg 22317207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 222
Target Start/End: Complemental strand, 28983130 - 28982976
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| || |||||||| |||||  |||| || ||| ||| ||||||    ||||||||||| ||||| ||||||||| |  | ||||| |    
T  28983130 aatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgtggtggtatttattgatgatattctaatctattcca 28983031  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaagga 222  Q
    |  ||||||| |||||||| ||||||   || || ||||||||||| ||||||||    
T  28983030 agaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaagga 28982976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 222
Target Start/End: Complemental strand, 28988349 - 28988195
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| || |||||||| |||||  |||| || ||| ||| ||||||    ||||||||||| ||||| ||||||||| |  | ||||| |    
T  28988349 aatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgtggtggtatttattgatgatattctaatctattcca 28988250  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaagga 222  Q
    |  ||||||| |||||||| ||||||   || || ||||||||||| ||||||||    
T  28988249 agaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaagga 28988195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 193; Significance: 1e-105; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 25768167 - 25767907
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||||||||||| ||| | ||||||||||||| |||||| |||||||||||| |||||||| ||| ||||||||||||||||||| |||||||||    
T  25768167 atccaaaaccgcgttccaaacaaggtatggacactatgagtattctgtgatgccattcggagtatctaattcgccaggtgtcttcatggaatatatgaat 25768068  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| | ||||||||||||||||  ||||    
T  25768067 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcaaaatctgagaaggagcatgctgagcatttgagga 25767968  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25767967 ttatgttgcaagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttg 25767907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 6151144 - 6151404
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||| | ||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  6151144 atccaaaactgtgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaatgcgccaggtgtctttatggagtatatgaat 6151243  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||   | ||    
T  6151244 aaaatatttcatccttatctagaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatctgaggaggagcatgctgagcatctgacga 6151343  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||    
T  6151344 ttgtgttgcaagtgttgaaggagaaccagttatgtgctaagttgtctaagtgcgagttttg 6151404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 8272690 - 8272950
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| ||||| || ||||||    
T  8272690 atccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaat 8272789  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||||||  ||||    
T  8272790 agaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgagga 8272889  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||||||||| ||||||||||| || |  |||||||||||||||||||||||    
T  8272890 ttgtgttgcaagtcttgaaagagaaccagttgtgcgccaagttgtctaagtgtgagttttg 8272950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 30139655 - 30139395
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||| ||||||||||| ||||| || ||||||    
T  30139655 atccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggaatacatgaat 30139556  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||||||  ||||    
T  30139555 agaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgagga 30139456  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||||||||| ||||||||||| ||||  |||||||||||||||||||||||    
T  30139455 ttgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttg 30139395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 30149206 - 30148946
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||| ||||||||||| ||||| || ||||||    
T  30149206 atccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggaatacatgaat 30149107  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||||||  ||||    
T  30149106 agaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgagga 30149007  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||||||||| ||||||||||| ||||  |||||||||||||||||||||||    
T  30149006 ttgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttg 30148946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 13965643 - 13965904
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||| || ||||||    
T  13965643 atccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaatgcgccaggtgtctttatggaatacatgaat 13965742  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaag-agcatgctgagcattaaagg 199  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||| |||||||||||||||  |||    
T  13965743 agaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaagtctgaggaagaagcatgctgagcatttgagg 13965842  T
Q  200 attgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||| |||||| ||||||||||| | ||  || ||||||||||||||||||||    
T  13965843 attgtgttgcaagacttgaaagagaaccagttgtctgccaatttgtctaagtgtgagttttg 13965904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 15611952 - 15611692
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||| ||||||||||| ||||| |||||||||    
T  15611952 atccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggaatatatgaat 15611853  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||  ||||    
T  15611852 agaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgagga 15611753  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    |||| |||||||| ||||| || |||| ||| ||||  |||||||||||| ||||||||||    
T  15611752 ttgtcttgcaagttttgaaagataaccggttgtgtgccaagttgtctaagcgtgagttttg 15611692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 15948761 - 15949021
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  15948761 atccaaaaccgcgttccgaacgaggtatggacactatgagtattccgtgatgccatttggagtatccaatgcgccaggtgtctttatggaatatatgaat 15948860  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    |||||||||||||||||| ||||||| ||||||||||| || |||||||||||||||||||||||||| | |||||||||||||| |||||||   ||||    
T  15948861 agaatatttcatccttatttggaccgatttgtggtggttttcatagatgatattttggtgtattcgaagtctgaggaagagcatgttgagcatctgagga 15948960  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||||||||| ||||||||||| || |  ||||||||||||||||| |||||    
T  15948961 ttgtgttgcaagtcttgaaagagaaccagttgtgagccaagttgtctaagtgtgaattttg 15949021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 173 - 261
Target Start/End: Original strand, 6710880 - 6710968
Alignment:
Q  173 gaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||| ||||||||||||||||  |||||||||||||  || ||||||||||| ||||| | || ||||||||||||||||||||||||    
T  6710880 gaggaggagcatgctgagcatttgaggattgtgttgcgtgttttgaaggagaatcagttgtttgctaagttgtctaagtgtgagttttg 6710968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 225
Target Start/End: Complemental strand, 14088455 - 14088298
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| ||||||||||||||||| ||||| |||||| |||| |||||    |||||||| || || || ||||| |||||| | |||||||    
T  14088455 aatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattcga 14088356  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaa 225  Q
     |  ||||||||||||||| || |||   |||||||| |||||||| ||||| |||||    
T  14088355 gaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaa 14088298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 258
Target Start/End: Original strand, 11950255 - 11950445
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| ||||||||||| |||||  |||| || ||| |||| |||||    || ||||| |||||||| ||||||||| || | ||||| |    
T  11950255 aatgcgcctggtgtgttcatggagtagatgaaccgaattttccatgcttacctggataaattcgtggttgtgtttattgatgatattctgatttattcta 11950354  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagtt 258  Q
    |   ||| ||||||||||| || ||||  | ||||||||||||||| ||||| |||||  |||| | || ||||||||| |||||||||||    
T  11950355 agactgaagaagagcatgcagaacatttgaagattgtgttgcaagtattgaaagagaagaagttgtatgctaagttgtcgaagtgtgagtt 11950445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 68 - 225
Target Start/End: Original strand, 13970467 - 13970624
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| ||||||||||||||||| ||||| |||||| |||| |||||    |||||||| || || || ||||| |||||| | |||||||    
T  13970467 aatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattcga 13970566  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaa 225  Q
     |  ||||||||||||||| || |||   ||| |||| |||||||| ||||| |||||    
T  13970567 gaactgaggaagagcatgcagaacatctgagggttgtattgcaagtattgaaagagaa 13970624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 225
Target Start/End: Original strand, 11889638 - 11889795
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||||||||| |||||||| || |||||| | || |||||| | ||| | || || || ||||| ||||| || |||||||||||| | || || |    
T  11889638 aatgcgccaggtgtgttcatggaatacatgaatcgtatttttcatgcgtatttagatcgcttcgtggttgtgttcattgatgatattttgatatactcta 11889737  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaa 225  Q
    | | | ||||||| |||||||||||||  | |||||| ||||||||  ||||||||||    
T  11889738 agtttaaggaagaacatgctgagcatttgaagattgttttgcaagtgctgaaggagaa 11889795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 156
Target Start/End: Original strand, 13318828 - 13318937
Alignment:
Q  47 gtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatag 146  Q
    ||||||||||| || ||  | |||||||| ||||| |||||||||||||||||  |||| |||||| ||| ||||||    ||||||||||| ||||| |    
T  13318828 gtgatgccattcggtgttactaatgcgcctggtgtgttcatggagtatatgaaccgaatttttcatgcttttctggataaatttgtggtggtatttattg 13318927  T
Q  147 atgatatttt 156  Q
    ||||||||||    
T  13318928 atgatatttt 13318937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 225
Target Start/End: Complemental strand, 15261402 - 15261245
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||||||||| || |||||||| |||||| | || |||||| | | | |||| ||||| ||||| || || || |||||||||||| | ||||| |    
T  15261402 aatgcgccaggtgtgtttatggagtacatgaatcgtatctttcatgcgtttttggatcgtttcgtggttgtattcatcgatgatattttgatatattcca 15261303  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaa 225  Q
    |   ||| ||||| |||||||||||||  | |||||| ||||||||  ||||||||||    
T  15261302 agactgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaggagaa 15261245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 55498570 - 55498486
Alignment:
Q  132 tggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtctt 216  Q
    ||||||||||||| |||||||| || ||||||||||| |  |||||  ||||||| |||||||  ||||||||||||||| ||||    
T  55498570 tggtggtgtttatcgatgatatcttagtgtattcgaagtcggaggagcagcatgcagagcatttcaggattgtgttgcaaatctt 55498486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 186
Target Start/End: Complemental strand, 13943803 - 13943688
Alignment:
Q  71 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaat 170  Q
    ||||| ||||| |||||||||||||||||| |||| |||||| ||| ||||||    || |||||||| ||||| ||||||||| || | ||||||||      
T  13943803 gcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattcgaaga 13943704  T
Q  171 atgaggaagagcatgc 186  Q
     ||| |||||||||||    
T  13943703 ctgaagaagagcatgc 13943688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 222
Target Start/End: Complemental strand, 28756100 - 28755946
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| || |||||||| |||||  |||| || ||| ||| ||||||    ||||| ||||||||||| |||||||| ||  | ||||| |    
T  28756100 aatgcgccgggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatatcttaatttattcca 28756001  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaagga 222  Q
    |  ||||||| |||||||| ||||||   || |||||||||||||| ||||||||    
T  28756000 agaatgaggaggagcatgcagagcatctgagaattgtgttgcaagtgttgaagga 28755946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 215 - 261
Target Start/End: Original strand, 55514237 - 55514283
Alignment:
Q  215 ttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||| || ||||||| ||||||||||||||||||||||||    
T  55514237 ttgaaggagaatcatttatgtgctaagttgtctaagtgtgagttttg 55514283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 225
Target Start/End: Complemental strand, 41179295 - 41179147
Alignment:
Q  77 ggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgagg 176  Q
    ||||| |||||||||||||||||| |||| |||||| ||| ||||||    || |||||||| ||||| ||||||||| || | ||||||||   ||| |    
T  41179295 ggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattcgaagactgaag 41179196  T
Q  177 aagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaa 225  Q
    |||||||| | || |||   || |||||| ||||||| ||||| |||||    
T  41179195 aagagcattcagaacatctgagaattgtgctgcaagttttgaaagagaa 41179147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 219
Target Start/End: Complemental strand, 44779026 - 44778878
Alignment:
Q  71 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaat 170  Q
    ||||| ||||| |||||||||| ||||||| |||| |||||| ||| ||||||    || |||||||| ||||| ||||| ||| || | ||||||||      
T  44779026 gcgcccggtgtattcatggagtttatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgacattctgatttattcgaaga 44778927  T
Q  171 atgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaa 219  Q
     ||| ||||||||||| || |||   || |||||||||||||| |||||    
T  44778926 ctgaagaagagcatgcagaacatctgagaattgtgttgcaagttttgaa 44778878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 225
Target Start/End: Original strand, 15723310 - 15723449
Alignment:
Q  86 atggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatg 185  Q
    ||||||||||||||| | || |||||| | | | |||| || |||||||| |||||||| |||||||||||| | || || ||   ||| ||||| ||||    
T  15723310 atggagtatatgaatcgcatctttcatgcatttttggatcggtttgtggttgtgtttatcgatgatattttgatttactccaagactgaagaagaacatg 15723409  T
Q  186 ctgagcattaaaggattgtgttgcaagtcttgaaggagaa 225  Q
    ||||||||   | |||||| |||||||| ||||| |||||    
T  15723410 ctgagcatctgaagattgttttgcaagtgttgaaagagaa 15723449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 10418395 - 10418477
Alignment:
Q  71 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatat 153  Q
    ||||| ||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||||||||| ||||||||||||||    
T  10418395 gcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttttctggataaatttgtggtggtatttatagatgatat 10418477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 119
Target Start/End: Complemental strand, 16880114 - 16880084
Alignment:
Q  89 gagtatatgaatagaatatttcatccttatc 119  Q
    |||||||||||||||||||||||||||||||    
T  16880114 gagtatatgaatagaatatttcatccttatc 16880084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 261
Target Start/End: Complemental strand, 18915361 - 18915315
Alignment:
Q  215 ttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    |||||||||||| ||||||||| ||||||||| |||||||| |||||    
T  18915361 ttgaaggagaactagttatgtgctaagttgtccaagtgtgaattttg 18915315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 222
Target Start/End: Complemental strand, 47125726 - 47125572
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| || |||||||| |||||  |||| || ||| ||| ||||||    ||||| ||||||||||| ||||||||| |  | ||||| |    
T  47125726 aatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattctaatctattcca 47125627  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaagga 222  Q
    |  ||||||| |||||||| ||||||   || || ||||||||||| ||||||||    
T  47125626 agaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaagga 47125572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 255
Target Start/End: Complemental strand, 13254480 - 13254275
Alignment:
Q  50 atgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatg 149  Q
    ||||| ||||||||  ||||||| || || || || ||||||||||||||| | || || ||| | | | |||| || |||||||| |||||||| || |    
T  13254480 atgccttttggagttaccaatgcacctggagtgtttatggagtatatgaatcgcatcttccatgcatttttggatcggtttgtggttgtgtttatcgacg 13254381  T
Q  150 atattttggtgtattcgaaatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaa 249  Q
    |||||||| | || || ||   ||| ||||| ||||||||||||   | |||||| |||||||| ||||| |||||  || | | || ||| ||||||||    
T  13254380 atattttgatctactccaagactgaagaagaacatgctgagcatctgaagattgttttgcaagtgttgaaagagaagaagctttatgctaaattgtctaa 13254281  T
Q  250 gtgtga 255  Q
    ||||||    
T  13254280 gtgtga 13254275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 153
Target Start/End: Original strand, 18132693 - 18132778
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatat 153  Q
    |||||||| ||||| |||||||||||||||||  |||| |||||| |||| |||||    |||||||| |||||||| || |||||    
T  18132693 aatgcgcctggtgtgttcatggagtatatgaaccgaatttttcatgcttacctggataaatttgtggttgtgtttattgacgatat 18132778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 15014132 - 15014200
Alignment:
Q  86 atggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatatt 154  Q
    ||||| ||||||||| | || |||||| ||||| |||| || ||||| || ||||||||||||||||||    
T  15014132 atggaatatatgaatcgtatttttcatgcttatttggatcgatttgttgttgtgtttatagatgatatt 15014200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 17188156 - 17188112
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcat 112  Q
    |||||||| ||||| ||||||||||||||||| ||||| ||||||    
T  17188156 aatgcgcctggtgtgttcatggagtatatgaacagaatttttcat 17188112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 193; Significance: 1e-105; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 20927289 - 20927029
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| ||||| || ||||||    
T  20927289 atccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaat 20927190  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||| ||||||||  ||||    
T  20927189 agaatatttcatccttatctggacagttttgtggtggtgttcatagatgatattttggtgtattcgaagtctgaggaagagcatgatgagcatttgagga 20927090  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||    
T  20927089 ttgtgttgcaagtcttgaaggagaatcagttatgtgctaagttatctaagtgtgagttttg 20927029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 20829516 - 20829776
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||| ||||||||||| ||||| || ||||||    
T  20829516 atccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggaatacatgaat 20829615  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||||||  ||||    
T  20829616 agaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgagga 20829715  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||||||||| ||||||||||| ||||  |||||||||||||||||||||||    
T  20829716 ttgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttg 20829776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 41215980 - 41216240
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||||||||||||||||| ||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||| |||||| | |||||||||    
T  41215980 atccaaaaccgcgttccgaacgaggtatggaaactatgagtattctgtgatgccatttggagtatccaatgcgccaggtgttttcatgcaatatatgaat 41216079  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    |||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||| | |||||| ||||||||||||||||  ||||    
T  41216080 agaatatttcatccttttctggaccgttttatggtggtgtttattgatgatattttggtgtattcgaagtctgaggaggagcatgctgagcatttgagga 41216179  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||| |||||||||||||||   |||||||  ||||||||| ||||||||||||||    
T  41216180 ttgtgttgcgagtcttgaaggagaattggttatgttctaagttgtcgaagtgtgagttttg 41216240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 20527288 - 20527147
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    |||||||||||| |||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||| ||||||||||| || || || ||||||    
T  20527288 atccaaaaccgcattccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatagaatacatgaat 20527189  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgttt 142  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  20527188 agaatatttcatccttatctggaccgttttgtggtggtgttt 20527147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 21201003 - 21201263
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||| |||||||||||||  ||||| |||||| | |||| ||||||||||||| | ||  | ||| ||||  ||||||||||||| |||||||||    
T  21201003 atccaaaactgcgttccgaacgagatatggtcactatgaatattctgtgatgccatttagtgtgactaatacgccgagtgtcttcatggaatatatgaat 21201102  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||||||||||||||| || | ||||||| ||  |||||||||||||| |||||||||||||| |  ||||| ||||||| | |||||   ||||    
T  21201103 agaatatttcatccttatctgtactggtttgtggaggcttttatagatgatatcttggtgtattcgaagttggaggaggagcatgttaagcatctgagga 21201202  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||   ||||||||| ||  |||| | || ||| ||||| |||||||| |||||    
T  21201203 ttgtgttgcataccttgaaggataagaagttgtttgctaacttgtcgaagtgtgaattttg 21201263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 22133880 - 22133963
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtctt 84  Q
    |||||| ||||||||  |||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  22133880 atccaagaccgcgttatgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaatgcgccaggtgtctt 22133963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 224
Target Start/End: Original strand, 20854954 - 20855107
Alignment:
Q  71 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaat 170  Q
    ||||| ||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||||||||| |||||||||||||||||| | ||||| |||     
T  20854954 gcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttttctggataaatttgtggtggtatttatagatgatattttgatttattctaaaa 20855053  T
Q  171 atgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggaga 224  Q
     ||| || |||||||| || || |  | ||||||||||||  | ||||||||||    
T  20855054 ctgaagaggagcatgcagaacacttgaagattgtgttgcagattttgaaggaga 20855107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 222
Target Start/End: Original strand, 31538188 - 31538342
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| || |||||||| |||||  |||| || ||| ||| ||||||    ||||| ||||||||||| |||||||||||  | ||||| |    
T  31538188 aatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattcca 31538287  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaagga 222  Q
    |  ||||||| |||||||| ||||||   || ||||| |||||||| ||||||||    
T  31538288 agaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaagga 31538342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 222
Target Start/End: Complemental strand, 37679248 - 37679094
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| || |||||||| |||||| |||| || ||| ||| ||||||    ||||| ||||||||||| |||||||||||  | ||||| |    
T  37679248 aatgcgcctggtgtttttatggagtacatgaatcgaatcttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattcca 37679149  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaagga 222  Q
    |  |||||||  ||||||| ||||||   || ||||| |||||||| ||||||||    
T  37679148 agaatgaggagaagcatgcagagcatctgagaattgtattgcaagtgttgaagga 37679094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 222
Target Start/End: Complemental strand, 48425072 - 48424918
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| || |||||||| |||||  |||| || ||| ||| ||||||    ||||| ||||||||||| |||||||||||  | ||||| |    
T  48425072 aatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattcca 48424973  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaagga 222  Q
    |  ||||||| |||||||| ||||||   || ||||| |||||||| ||||||||    
T  48424972 agaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaagga 48424918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 222
Target Start/End: Complemental strand, 52987940 - 52987786
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| || |||||||| |||||  |||| || ||| ||| ||||||    ||||| ||||||||||| |||||||||||  | ||||| |    
T  52987940 aatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattcca 52987841  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaagga 222  Q
    |  ||||||| |||||||| ||||||   || ||||| |||||||| ||||||||    
T  52987840 agaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaagga 52987786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 20296577 - 20296426
Alignment:
Q  71 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaat 170  Q
    ||||| ||||| ||||||||||| |||||  |||| || ||| ||| ||||||    ||||| ||||||||||| |||||||| ||  | ||||| ||      
T  20296577 gcgcctggtgtgttcatggagtacatgaaccgaatcttccatgcttttctggataagtttgttgtggtgtttattgatgatatcttaatttattctaaga 20296478  T
Q  171 atgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaagga 222  Q
    |||| || |||||||| ||||||  ||| ||||| |||||||| ||||||||    
T  20296477 atgaagaggagcatgcagagcatctaagaattgtattgcaagtgttgaagga 20296426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 258
Target Start/End: Original strand, 20834091 - 20834281
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||  ||||| |||||||||||||||||  |||| || ||| |||| |||||    || ||||| |||||||| ||||||||| || | ||||| |    
T  20834091 aatgcgcgtggtgtgttcatggagtatatgaaccgaattttccatgcttacctggataaattcgtggttgtgtttattgatgatattctgatttattcaa 20834190  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagtt 258  Q
    |   ||| ||||| ||||| || ||||  | ||||||||||||| | ||||| |||||   ||| | || ||||||||| |||||||||||    
T  20834191 agactgaagaagaacatgcagaacatttgaagattgtgttgcaaattttgaaagagaaaaggttgtatgctaagttgtcgaagtgtgagtt 20834281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 16378263 - 16378174
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttg 157  Q
    |||||||| ||||| ||||||||||| |||||| |||| ||||||   | | |||| ||||| ||||| |||||||| ||||| ||||||    
T  16378263 aatgcgcctggtgtgttcatggagtacatgaatcgaatttttcatgtgtttttggatcgtttcgtggttgtgtttattgatgacattttg 16378174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 144
Target Start/End: Original strand, 21743743 - 21743819
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttat 144  Q
    |||||||| ||||| || |||||||||||||| ||||| || ||| ||||||||||    |||||||| ||||||||    
T  21743743 aatgcgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttat 21743819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 35930949 - 35930985
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactat 37  Q
    |||||||||| |||||||||||| |||||||||||||    
T  35930949 atccaaaaccacgttccgaacgaggtatggacactat 35930985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 24427 - 24167
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||||||||||||||| | ||||||||||||| |||||  ||||||||||||||||||||| ||||||| |||||||||  ||||||||||||||    
T  24427 atccaaaaccgcgttccgaacaaggtatggacactatgagtatgctgtgatgccatttggagtatcgaatgcgctaggtgtctttgtggagtatatgaat 24328  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||| ||||||||||||||||  ||||    
T  24327 agaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtatattcgaaatctgaggaggagcatgctgagcatttgagga 24228  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||    
T  24227 ttgtgttgcaagttttgaaggggaaccagttatgtgctaagttgtctaagtgtgagttttg 24167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 189; Significance: 1e-102; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 26321 - 26581
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||  |||| |  ||||||    
T  26321 atccaaaaccgcgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaatgcgccaggtgtctttctggaatgcatgaat 26420  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||| ||||  ||||    
T  26421 agagtatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaagtctgaggaagagcatgctgaacatttgagga 26520  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  26521 ttgtgttgcaagtcttgaaagagaaccagttatgtgctaagttgtctaagtgtgagttttg 26581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 260
Target Start/End: Original strand, 25270 - 25315
Alignment:
Q  215 ttgaaggagaaccagttatgtgttaagttgtctaagtgtgagtttt 260  Q
    ||||||||||| ||||| |||| |||||||||||||||||||||||    
T  25270 ttgaaggagaatcagttgtgtgctaagttgtctaagtgtgagtttt 25315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 358 - 103
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    |||||||| |||||||||||| | ||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  358 atccaaaatcgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtcttcatagagtatatgaat 259  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||  ||||    
T  258 agaatatttcatccttatctgtactgttttgtggtggtgtttatagatgatattttggggtatttgaaatctgaggaagagcatgctgagcatttgagga 159  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgag 256  Q
    || ||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  158 ttatgttgcaagtcttgaaggagaactagttatgtgctaagttgtctaagtgtgag 103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 24568260 - 24568519
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    |||||||||| |||||| ||| | ||||||||||||| |||||| ||||||||||||||||||||| |||||  ||||||||||||||||||||||||||    
T  24568260 atccaaaaccacgttccaaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcatcaggtgtcttcatggagtatatgaat 24568359  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| | |||||| ||||||| ||||||||  ||||    
T  24568360 agaatatttcatccttatctggaccgttttgtggtgttgtttatagattatattttggtgtattcgaagtctgaggaggagcatgttgagcatttgagga 24568459  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagtttt 260  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24568460 ttgtgttgcaagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagtttt 24568519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 24829780 - 24830040
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||||||||| ||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| ||||| || ||||||    
T  24829780 atccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaat 24829879  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || | ||||||||||||||| |||||||  ||||    
T  24829880 agaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgcggagcatttgagga 24829979  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||| ||||||| ||||||||||| ||||  |||||||||||||||||||||||    
T  24829980 ttgtgttgcaattcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttg 24830040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 22760161 - 22760421
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||||| ||||  ||| | ||||||||||||| |||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  22760161 atccaaaaccgtgttcaaaacaaggtatggacactatgagtattctgtgatgccatttggagtatccgatgcgctaggtgtcttcatggagtatatgaat 22760260  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||| |||||   ||||    
T  22760261 agaatatttcatccttacctggaccgttttgtggtggtgtttatagatgatattttggtgtatttgaaatctgaggaggagcatgctaagcatctgagga 22760360  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||| ||| |||||||||||||||||| |||||||||||||||| |||||||    
T  22760361 ttgtgttgcaagttttggaggagaaccagttatgtgctaagttgtctaagtgtaagttttg 22760421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 22279956 - 22279696
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||||||| ||||||| ||||| || ||||||    
T  22279956 atccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccatgtgtctttatggaatacatgaat 22279857  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||   |||| ||||||||||||||||  ||||    
T  22279856 agaatattttatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaaatcgaaggaggagcatgctgagcatttgagga 22279757  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||| ||||| ||||||||||||||||  ||||||||||||||||| |||||    
T  22279756 ttgtgttgcaagtattgaaagagaaccagttatgtgcaaagttgtctaagtgtgaattttg 22279696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 25130460 - 25130200
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  25130460 atccaaaaccgcgttccgaacgaggtatggacactatgagtattctatgatgccatttggagtatccaatgcgccaggtgtcttcctggaatatatgaat 25130361  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||||||||||  |||||||| |||||||||||||||||| ||||||||||||| ||| |||| | |||||| ||||||||||||||||  |||     
T  25130360 agaatatttcatcctttcctggaccgctttgtggtggtgtttatatatgatattttggtatatacgaagtctgaggaggagcatgctgagcatttgaggg 25130261  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||| |||||| |||||||| | |||||||| ||||||||  ||||||||||||||    
T  25130260 ttgtgttgcgagtcttaaaggagaatcggttatgtgctaagttgttgaagtgtgagttttg 25130200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 260
Target Start/End: Original strand, 10037927 - 10038183
Alignment:
Q  4 caaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaataga 103  Q
    |||||| || || ||||||| |||||| |||||| | || | ||||||| ||||||| ||  | |||||||  |||||||||||||| || |||||||||    
T  10037927 caaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaataga 10038026  T
Q  104 atatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaaggattg 203  Q
    || || ||||||||| |||| |  ||| |||||||||||||||| ||||| ||| |||||||||| |  ||||| |||||||| ||||||  ||||||||    
T  10038027 atcttccatccttatttggatcagtttatggtggtgtttatagacgatatcttgatgtattcgaagtcagaggaggagcatgcagagcatctaaggattg 10038126  T
Q  204 tgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagtttt 260  Q
    |||||||    ||||| |||||  |||| | || ||||||||| |||||||||||||    
T  10038127 tgttgcatactttgaaagagaataagttgtttgataagttgtcaaagtgtgagtttt 10038183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 4 - 260
Target Start/End: Original strand, 10098312 - 10098568
Alignment:
Q  4 caaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaataga 103  Q
    |||||| || || ||||||| |||||| |||||| | || | ||||||| ||||||| ||  | |||||||  |||||||||||||| || |||||||||    
T  10098312 caaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaataga 10098411  T
Q  104 atatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaaggattg 203  Q
    || || ||||||||| |||| |  ||| |||||||||||||||| ||||| ||| |||||||||| |  ||||| |||||||| ||||||  ||||||||    
T  10098412 atcttccatccttatttggatcagtttatggtggtgtttatagacgatatcttgatgtattcgaagtcagaggaggagcatgcggagcatctaaggattg 10098511  T
Q  204 tgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagtttt 260  Q
    |||||||    ||||| |||||  |||| | || ||||||||  |||||||||||||    
T  10098512 tgttgcatactttgaaagagaataagttgtttgataagttgttaaagtgtgagtttt 10098568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 222
Target Start/End: Complemental strand, 23112520 - 23112366
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    ||||||||  |||| || |||||||| ||||||||||| || ||| |||||||||| |  ||||| || |||||||| |||||||| ||| | ||||| |    
T  23112520 aatgcgcctagtgtgtttatggagtacatgaatagaattttccatgcttatctggatcagtttgtagttgtgtttattgatgatatcttgatttattcta 23112421  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaagga 222  Q
    |   ||| ||||||||||| ||||||| || ||||||||||||||| ||||||||    
T  23112420 agactgaagaagagcatgcagagcatttaaagattgtgttgcaagtgttgaagga 23112366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 23098677 - 23098802
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| || ||||||||||||||||| || |||||| ||| ||||||  | || |||||||||||||| |||||||||||  | ||||| |    
T  23098677 aatgcgcctggtgtatttatggagtatatgaataggatttttcatgcttttctggatagattcgtggtggtgtttattgatgatattttaatttattcta 23098776  T
Q  168 aatatgaggaagagcatgctgagcat 193  Q
    |   ||| ||||||||||| ||||||    
T  23098777 agactgaagaagagcatgccgagcat 23098802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 30010843 - 30010932
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttg 157  Q
    ||||||||||| || || ||| | ||||||||| | || |||||| |||||||||| |||||||| || |||||||||||||||||||||    
T  30010843 aatgcgccaggagtgtttatgaaatatatgaatcgtatttttcatacttatctggatcgttttgttgtcgtgtttatagatgatattttg 30010932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 222
Target Start/End: Complemental strand, 1065535 - 1065381
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| || |||||||| |||||| |||| || ||| ||| ||||||    ||||||||||| ||||| |||||||||||  | ||||| |    
T  1065535 aatgcgcctggtgtttttatggagtacatgaatcgaatcttccatgcttttctggataagtttgtggtggtatttattgatgatattttaatctattcca 1065436  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaagga 222  Q
    |  ||||||| |||||||| ||||||   || || ||||||||||| ||||||||    
T  1065435 agaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaagga 1065381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 225
Target Start/End: Complemental strand, 27789521 - 27789367
Alignment:
Q  71 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaat 170  Q
    ||||| ||||| |||||||||||||||||| |||| |||||| ||| ||||||    || |||||||| ||||| ||||||||| || | ||||||||      
T  27789521 gcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattcgaaga 27789422  T
Q  171 atgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaa 225  Q
     ||| ||||||||||| || |||   || |||||| ||||||| ||||| |||||    
T  27789421 ctgaagaagagcatgcagaacatctgagaattgtgctgcaagttttgaaagagaa 27789367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 157
Target Start/End: Original strand, 30209594 - 30209665
Alignment:
Q  86 atggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttg 157  Q
    ||||| |||||||||   || |||||| |||||||||| |||||||| || |||||||||||||||||||||    
T  30209594 atggaatatatgaatcatatttttcatacttatctggatcgttttgttgttgtgtttatagatgatattttg 30209665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 215 - 261
Target Start/End: Original strand, 12639039 - 12639085
Alignment:
Q  215 ttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||| ||||| |||||||||| ||||||||||||||||||||||||    
T  12639039 ttgaaagagaatcagttatgtgctaagttgtctaagtgtgagttttg 12639085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 258
Target Start/End: Complemental strand, 23278560 - 23278370
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| |||||||||||||||||  |||| || ||| ||||||||||   ||| ||||| || ||||| ||||| ||| || | ||||| |    
T  23278560 aatgcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttatctggataatttcgtggttgtttttattgatgacattctgatttattcta 23278461  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagtt 258  Q
    |   ||| ||||||||||| || |||   | ||||||||||||| | ||||| |||||  |||| | || ||||||||| ||||| |||||    
T  23278460 agactgaagaagagcatgcagaacatctgaagattgtgttgcaaatattgaaagagaaaaagttgtatgctaagttgtcgaagtgcgagtt 23278370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 219
Target Start/End: Complemental strand, 12576134 - 12575986
Alignment:
Q  71 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaat 170  Q
    ||||| ||||| |||||||||||||||||| |||| |||||| ||| | ||||    || |||||||| ||||| ||||| ||| || | ||||||||      
T  12576134 gcgcccggtgtattcatggagtatatgaatcgaatttttcatgcttttttggataaattcgtggtggtatttattgatgacattctgatttattcgaaga 12576035  T
Q  171 atgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaa 219  Q
     ||| ||||||||||| || |||   || |||||||||||||| |||||    
T  12576034 ctgaagaagagcatgcagaacatctgagaattgtgttgcaagttttgaa 12575986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 255
Target Start/End: Original strand, 24818889 - 24819076
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||||||||| || ||||||||  ||||| | || |||||| | ||| | || || ||  |||| ||||| || |||||||||||| | || || |    
T  24818889 aatgcgccaggtgtgtttatggagtacttgaatcgtatttttcatgcgtatttagatcgcttcatggttgtgttcattgatgatattttgatatactcta 24818988  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtga 255  Q
    |   ||| ||||| |||||||||||||  |||||||| ||||||||  ||||||||||  || | | || ||||||||| ||||||||    
T  24818989 agactgaagaagaacatgctgagcatttgaggattgtcttgcaagtgctgaaggagaagaagctttatgctaagttgtcaaagtgtga 24819076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 27208841 - 27208920
Alignment:
Q  78 gtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttg 157  Q
    |||| |||||||||||||||||  |||| || ||| ||| ||||||    || |||||||||||||||||||||||||||    
T  27208841 gtgtgttcatggagtatatgaaccgaattttccatgcttttctggataaattcgtggtggtgtttatagatgatattttg 27208920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 222
Target Start/End: Complemental strand, 31832442 - 31832288
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| || |||||||| |||||  |||| || ||| ||| ||||||    ||||| ||||||||||| |||||||| ||  | ||||| |    
T  31832442 aatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatatcttaatttattcca 31832343  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaagga 222  Q
    |  ||||||| |||||||| ||||||   || ||||| |||||||| ||||||||    
T  31832342 agaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaagga 31832288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 25645 - 25385
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||| ||||||||||| ||||| || ||||||    
T  25645 atccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggaatacatgaat 25546  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||||||  ||||    
T  25545 agaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgagga 25446  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||||||||| ||||||||||| ||||  |||||||||||||||||||||||    
T  25445 ttgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttg 25385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 185; Significance: 1e-100; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 15159 - 14899
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||| ||||||||||| ||||| || ||||||    
T  15159 atccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggaatacatgaat 15060  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||||||  ||||    
T  15059 agaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgagga 14960  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||||||||| ||||||||||| ||||  |||||||||||||||||||||||    
T  14959 ttgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttg 14899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 11229 - 11489
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    |||||||||||| |||||||| | ||||||||||||| |||||| | |||||||||||||||| || ||||||||||||||||| ||||| || ||||||    
T  11229 atccaaaaccgcattccgaacaaggtatggacactatgagtattctttgatgccatttggagtgtctaatgcgccaggtgtctttatggaatacatgaat 11328  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||  ||||||||  ||||    
T  11329 agaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaagtctgaggaagagcataatgagcatttgagga 11428  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||||||||| ||||||||||||||||  ||||| | |||||||||||||||    
T  11429 ttgtgttgcaagtcttgaaagagaaccagttatgtgcaaagttatataagtgtgagttttg 11489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 185; Significance: 1e-100; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 42509 - 42249
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||||| ||||||||| ||||| || ||||||    
T  42509 atccaaaactgcgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaatgcgctaggtgtctttatggaatacatgaat 42410  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||||||  ||||    
T  42409 agaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgagga 42310  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||||||||| ||||||||||| ||||  |||||||||||||||||||||||    
T  42309 ttgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttg 42249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 225
Target Start/End: Original strand, 31799 - 31956
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| ||||||||||||||||| ||||| |||||| |||| |||||    |||||||| || || || ||||| |||||| | |||||||    
T  31799 aatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattcga 31898  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaa 225  Q
     |  ||||||||||||||| || |||   |||||||| |||||||| ||||| |||||    
T  31899 gaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaa 31956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 7826109 - 7825849
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||| ||||||||||| ||||| || ||||||    
T  7826109 atccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggaatacatgaat 7826010  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||||||  ||||    
T  7826009 agaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgagga 7825910  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||||||||| ||||||||||| ||||  |||||||||||||||||||||||    
T  7825909 ttgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttg 7825849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 27105835 - 27106095
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||| ||||||||||| ||||| || ||||||    
T  27105835 atccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggaatacatgaat 27105934  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||||||  ||||    
T  27105935 agaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgagga 27106034  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||||||||| ||||||||||| ||||  |||||||||||||||||||||||    
T  27106035 ttgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttg 27106095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 27172490 - 27172230
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||| ||||||||||| ||||| || ||||||    
T  27172490 atccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggaatacatgaat 27172391  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||||||  ||||    
T  27172390 agaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgagga 27172291  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||||||||| ||||||||||| ||||  |||||||||||||||||||||||    
T  27172290 ttgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttg 27172230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 17925859 - 17925599
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||||||||| |||| || ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17925859 atccaaaaccgcgtttcgaatgaggtatggacactatgagtattctgtgatgccatttggagtatccaatgcgccaggtgtcttcatggaatatatgaat 17925760  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||| ||||| || | |  ||| ||||||| || ||||| ||| |    
T  17925759 agaatatttcatccttttctagaccgttttgtggtggtgtttatagattatattttggtatattcaaagtctagggaggagcatgttgtgcatttaagaa 17925660  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    |||||||||  |||||||||||||| |||||||||| |||||||||||||||||| |||||    
T  17925659 ttgtgttgcgcgtcttgaaggagaatcagttatgtgctaagttgtctaagtgtgaattttg 17925599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 4442137 - 4441877
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||||||||||||  ||| ||||| ||||||  |||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  4442137 atccaaaaccgcgttccggtcgaggtatgaacactaagagtattctgtgatgccattcggagtatccaatgcgccaggtgtcttcatggaatatatgaat 4442038  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    | |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||| |||||||  |||||||  ||||    
T  4442037 ataatattccatccttttctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctggggaggagcatgtcgagcatttgagga 4441938  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    | ||||||| |||||||||||| || | |||||||| ||||||||| ||||||||||||||    
T  4441937 tggtgttgcgagtcttgaaggaaaatcggttatgtgctaagttgtcgaagtgtgagttttg 4441877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 13458244 - 13457984
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    |||| |||||| ||||||||| | ||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  13458244 atccgaaaccgtgttccgaacaaggtatggacactatgagtattttgtgatgtcatttggagtatccaatgcgccaggtgtcttcatggaatatatgaat 13458145  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    |||| ||| ||||||| || ||| |||||||||||||||||||| ||||||||||||||||||||||  |  ||||| ||| ||||||||||||  ||||    
T  13458144 agaacattccatccttttcaggatcgttttgtggtggtgtttatcgatgatattttggtgtattcgaggtcagaggaggagtatgctgagcatttgagga 13458045  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    |||||||||  |||||||| ||||| || ||||||| ||||||||||||||||||||||||    
T  13458044 ttgtgttgcgtgtcttgaaagagaatcatttatgtgctaagttgtctaagtgtgagttttg 13457984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 13379092 - 13378969
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||||||||||||||||| |||||||||||   |||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  13379092 atccaaaaccgcgttccgaacgaggtatggacactg--agtattctgtgatgccatttggagtatccaatgcgccaggtgtcttcatgaaatatatgaat 13378995  T
Q  101 agaatatttcatccttatctggaccg 126  Q
    ||||||||||||||||||||||||||    
T  13378994 agaatatttcatccttatctggaccg 13378969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 261
Target Start/End: Original strand, 17143354 - 17143597
Alignment:
Q  18 gaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaatagaatatttcatcctta 117  Q
    |||||| ||||||||||||| | |||| || |||| ||||||| ||  | ||| |||| |||||||||||||| |||||||||||||| || ||||||||    
T  17143354 gaacgaggtatggacactatgaatattctgcgatgtcatttggtgtgactaatacgcccggtgtcttcatggaatatatgaatagaatcttccatcctta 17143453  T
Q  118 tctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttg 217  Q
    | |||| |  |||||||||||||||||||| ||||| |||||||||||||| |  ||||| || ||||| ||||||   |||||||||||||     |||    
T  17143454 tttggatcagtttgtggtggtgtttatagacgatatcttggtgtattcgaagtcagaggaggatcatgcggagcatatgaggattgtgttgcgtacgttg 17143553  T
Q  218 aaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||  |||| | || ||||||||| ||||||||||||||    
T  17143554 aaggagaagaagttgtttgataagttgtcgaagtgtgagttttg 17143597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 15716964 - 15717224
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||| ||||||||||| |  ||||| |||||| | |||| ||| |||||||||||  || | |||| |||  ||||||||||||| |||||||||    
T  15716964 atccaaaactgcgttccgaactagatatggtcactatgaatattctgtaatgccatttggtctaactaatgtgcctagtgtcttcatggaatatatgaat 15717063  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    |||||||| ||||||| ||||||||  ||| |||| ||||||||||| ||||| ||||| ||||| |  |  ||||| ||||||||||| ||||  ||||    
T  15717064 agaatattccatccttttctggaccagtttttggtagtgtttatagacgatatcttggtttattcaatgtcggaggaggagcatgctgaacattttagga 15717163  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
      ||||||||   ||||||||||||  |||| | || ||| ||||| ||||||||||||||    
T  15717164 ccgtgttgcagaccttgaaggagaagaagttgtttgctaatttgtcgaagtgtgagttttg 15717224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 225
Target Start/End: Complemental strand, 19614818 - 19614661
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| ||||||||||||||||| ||||| |||||| |||| |||||    |||||||| || || || ||||| |||||| | |||||||    
T  19614818 aatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattcga 19614719  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaa 225  Q
     |  ||||||||||||||| || |||   |||||||| |||||||| ||||| |||||    
T  19614718 gaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaa 19614661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 255
Target Start/End: Original strand, 11770430 - 11770556
Alignment:
Q  129 ttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaacca 228  Q
    ||||||| ||||| || |||||||||||| | || || || | ||||| ||| |||||||||||||  | |||||| |||||||| ||||| |||||  |    
T  11770430 ttgtggttgtgttcatcgatgatattttgatatactccaagtctgagggagaacatgctgagcatttgaagattgttttgcaagtgttgaaagagaagaa 11770529  T
Q  229 gttatgtgttaagttgtctaagtgtga 255  Q
    ||||| |||||| ||||||||||||||    
T  11770530 gttatatgttaaattgtctaagtgtga 11770556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 11386535 - 11386660
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||||||||| || |||||||||| ||| ||||| |||||| ||| ||||||  | || |||||||||||||| |||||||||||  | ||||| |    
T  11386535 aatgcgccaggtgtatttatggagtataagaacagaatttttcatgcttttctggatagattcgtggtggtgtttattgatgatattttaatttattcta 11386634  T
Q  168 aatatgaggaagagcatgctgagcat 193  Q
    |   ||| ||||||||||| ||||||    
T  11386635 agactgaagaagagcatgccgagcat 11386660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 68 - 225
Target Start/End: Original strand, 48813380 - 48813537
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    ||||||||| |||| || |||||||| |||||| | || |||||| ||||| | || || || ||||| ||||| || |||||||||||| | || || |    
T  48813380 aatgcgccaagtgtgtttatggagtacatgaattgtatttttcatgcttatttagatcgcttcgtggttgtgttcattgatgatattttgatatactcta 48813479  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaa 225  Q
    | | ||| ||||| |||||||||||||  | |||||||||||||||  ||||||||||    
T  48813480 agtctgaagaagaacatgctgagcatttgaagattgtgttgcaagtgctgaaggagaa 48813537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 219
Target Start/End: Complemental strand, 14139819 - 14139671
Alignment:
Q  71 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaat 170  Q
    ||||| ||||| |||||||||||||||||| |||| |||||| ||| ||||||    || |||||||| ||||| |||||||||||| | ||||| ||      
T  14139819 gcgcctggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattttgatttattctaaga 14139720  T
Q  171 atgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaa 219  Q
     ||| ||||||||||| || |||   || |||||||||||||| |||||    
T  14139719 ctgaagaagagcatgcagaacatctgagaattgtgttgcaagtattgaa 14139671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 219
Target Start/End: Original strand, 23503979 - 23504127
Alignment:
Q  71 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaat 170  Q
    ||||| ||||| |||||||||||||||||| |||| |||||| ||| ||||||    || |||||||| ||||| ||||||||| || | ||||||||      
T  23503979 gcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattcgaaga 23504078  T
Q  171 atgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaa 219  Q
     ||| ||||||||||| || |||   || |||||||||||||| |||||    
T  23504079 ctgaagaagagcatgcagaacatctgagaattgtgttgcaagttttgaa 23504127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 255
Target Start/End: Complemental strand, 19149354 - 19149167
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| || ||||||||||||||| |||| || ||| ||||||||||    |||||||| |||||||| ||||| || ||  | ||||| |    
T  19149354 aatgcgcctggtgtgtttatggagtatatgaattgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattcta 19149255  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtga 255  Q
    |   ||| ||||||||||| ||||||   | ||||||||||||||| ||||| || ||  |||| ||||| |||||||| || |||||    
T  19149254 agactgatgaagagcatgcagagcatctgaagattgtgttgcaagtgttgaaagaaaagaagttgtgtgtcaagttgtccaaatgtga 19149167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 255
Target Start/End: Complemental strand, 20748753 - 20748566
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| || |||||||||||||| ||||| || ||| ||||||||||    |||||||| |||||||| ||||| || ||  | ||||| |    
T  20748753 aatgcgcctggtgtgtttatggagtatatgaacagaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattcta 20748654  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtga 255  Q
    |   ||| ||||||||||| ||||||   | ||||||||||||||| ||||| || ||  |||| ||||| |||||||| || |||||    
T  20748653 agactgatgaagagcatgcagagcatctgaagattgtgttgcaagtgttgaaagaaaagaagttgtgtgtcaagttgtccaaatgtga 20748566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 258
Target Start/End: Complemental strand, 13675595 - 13675405
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| |||||||||||||||||  |||| || ||| |||| |||||    |||||||| || ||||| ||||| ||| || | ||||| |    
T  13675595 aatgcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttacctggataaatttgtggttgtatttattgatgacattctgatttattcaa 13675496  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagtt 258  Q
    |   ||| ||||||||||| ||||||   | |||||| |||||||| ||||| |||||  |||| | || ||||||||| |||||||||||    
T  13675495 agactgaagaagagcatgcagagcatctgaagattgtattgcaagtattgaatgagaaaaagttgtatgctaagttgtcgaagtgtgagtt 13675405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 219
Target Start/End: Original strand, 18052062 - 18052210
Alignment:
Q  71 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaat 170  Q
    ||||| ||||| |||||||||||||||||| |||| |||||| ||| ||||||    || |||||||| ||||| ||||| ||| || | ||||||||      
T  18052062 gcgcccggtgtattcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgacattctgatttattcgaaga 18052161  T
Q  171 atgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaa 219  Q
     ||| ||||||||||| || |||   || |||||||||||||| |||||    
T  18052162 ctgaagaagagcatgcagaacatctgagaattgtgttgcaagttttgaa 18052210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 14262351 - 14262433
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatga 150  Q
    |||||||| ||||| || |||||||||||||||||||| || ||| ||||||||||    |||||||| |||||||| |||||    
T  14262351 aatgcgcctggtgtgtttatggagtatatgaatagaattttccatgcttatctggataaatttgtggttgtgtttattgatga 14262433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 222
Target Start/End: Original strand, 26092904 - 26093058
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| || |||||||| |||||  |||| || ||| ||| ||||||    ||||| ||||||||||| |||||||||||  | ||||| |    
T  26092904 aatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattcca 26093003  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaagga 222  Q
    |  ||||||| |||||||| ||||||   || ||||| |||||||| ||||||||    
T  26093004 agaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaagga 26093058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 114
Target Start/End: Original strand, 39232 - 39320
Alignment:
Q  26 tatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaatagaatatttcatcc 114  Q
    ||||| || ||| ||||||  |||||||| |||||||| ||||| |||||||| || || |||||||||||||| ||||| || |||||    
T  39232 tatggtcattatgagtattcggtgatgccttttggagtgtccaacgcgccaggagtttttatggagtatatgaacagaattttccatcc 39320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 26116699 - 26116850
Alignment:
Q  71 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaat 170  Q
    ||||| ||||| || |||||||| |||||| |||| || ||| ||| ||||||    ||| | ||||||||||| || ||||||||  | ||||| ||      
T  26116699 gcgcctggtgtttttatggagtacatgaatcgaatcttccatgcttttctggataagtttcttgtggtgtttattgacgatattttaatctattccaaga 26116798  T
Q  171 atgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaagga 222  Q
    ||||||| |||||||| ||||||   || |||||||||||||| ||||||||    
T  26116799 atgaggaggagcatgcagagcatctgagaattgtgttgcaagtgttgaagga 26116850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 222
Target Start/End: Original strand, 11301319 - 11301473
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| || |||||||| |||||  |||| || ||| ||| ||||||    ||||| ||||||||||| |||||||| ||  | ||||| |    
T  11301319 aatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatatcttaatttattcca 11301418  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaagga 222  Q
    |  ||||||| |||||||| ||||||   || || ||||||||||| ||||||||    
T  11301419 agaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaagga 11301473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 222
Target Start/End: Complemental strand, 49154384 - 49154290
Alignment:
Q  128 tttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaagga 222  Q
    ||||| ||||||||||| |||||||||||  | ||||| ||  ||||||| |||||||| ||||||   || ||||| |||||||| ||||||||    
T  49154384 tttgttgtggtgtttattgatgatattttaatctattccaagaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaagga 49154290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 153
Target Start/End: Original strand, 12204906 - 12204991
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatat 153  Q
    |||||||| ||||| || |||||||| ||||||||||| || ||| ||||||||||    | |||||| |||||||| ||||||||    
T  12204906 aatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatctggataaatctgtggtcgtgtttattgatgatat 12204991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 185; Significance: 1e-100; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 1647011 - 1647271
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||    
T  1647011 atccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatatatgaat 1647110  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| | |||||||||||||||||||||||  ||||    
T  1647111 agaatatttcatccttatctggaccgttttgtggtggtgttcatagatgacattttggtgtattcgaagtttgaggaagagcatgctgagcatttgagga 1647210  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||||||||| || |||| ||| ||||  |||||||||||||||||||||||    
T  1647211 ttgtgttgcaagtcttgaaagataaccggttgtgtgccaagttgtctaagtgtgagttttg 1647271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 16380570 - 16380830
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||| ||||||||||| ||||| || ||||||    
T  16380570 atccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggaatacatgaat 16380669  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||||||  ||||    
T  16380670 agaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgagga 16380769  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||||||||| ||||||||||| ||||  |||||||||||||||||||||||    
T  16380770 ttgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttg 16380830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 16648166 - 16648426
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| ||||| || ||||||    
T  16648166 atccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaat 16648265  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||||||  ||||    
T  16648266 agaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgagga 16648365  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||||||||| ||||||||||| || |  |||||||||||||||||||||||    
T  16648366 ttgtgttgcaagtcttgaaagagaaccagttgtgcgccaagttgtctaagtgtgagttttg 16648426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 14130553 - 14130293
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||||||||| ||||||| ||||||| ||||| |||||||||||||| |||||||| ||||||||| || ||||||||||||||| |||||||||    
T  14130553 atccaaaaccgcgtttcgaacgaggtatggatactatgagtattatgtgatgtcatttggattatccaatgtgctaggtgtcttcatggaatatatgaat 14130454  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    |||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| | |||||| ||||||||||||||||  ||||    
T  14130453 agaacatttcatccttatttggaccgttttgtggtggtgtttagagatgatattttggtgtattcgaagtttgaggaggagcatgctgagcatttgagga 14130354  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14130353 ttgtgttacgagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttg 14130293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 23998332 - 23998072
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| ||||| || ||||||    
T  23998332 atccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaat 23998233  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  || |  ||||||||||||||||| ||||  ||||    
T  23998232 agaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattgaaagtccgaggaagagcatgctgaacatttgagga 23998133  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    |||||||| |||||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  23998132 ttgtgttgtaagtcttgaaagagaaccagttatgtgccaagttgtctaagtgtgagttttg 23998072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 16100099 - 16099833
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcat------ggagtat 94  Q
    |||||||||  |||| ||||||| ||||||||||||| |||||||||| |||||||||||||| || |||| |||||||||||| ||      |||||||    
T  16100099 atccaaaacatcgttacgaacgaggtatggacactatgagtattatgtaatgccatttggagtgtctaatgtgccaggtgtctttatctttatggagtat 16100000  T
Q  95 atgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcatt 194  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||| | | |||| ||||| ||||||||||    
T  16099999 atgaatagaatatttcatccatatttggaccgttttgtggtggtgtttatagatgataatttggtgtattcgaagtctaaggaggagcacgctgagcatt 16099900  T
Q  195 aaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
     |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  16099899 taaggattgtgttgcaagtcttgaaagagaaccagttatgtgctaagttgtctaagtgtgagttttg 16099833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 92 - 261
Target Start/End: Original strand, 23026013 - 23026182
Alignment:
Q  92 tatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagc 191  Q
    ||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||| ||| | |||||| |||||||||  ||    
T  23026013 tatatgaatagaatatttcatccttttatgaaccgttttgtggtggtgtttatagatgatattttggtgtatttgaagtctgaggaggagcatgcttcgc 23026112  T
Q  192 attaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    |||  ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23026113 atttgaggattgtgttgcgagtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttg 23026182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 153 - 261
Target Start/End: Original strand, 18836257 - 18836365
Alignment:
Q  153 ttttggtgtattcgaaatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtg 252  Q
    ||||||||||||| |||| |||||||||||||||||||||||  ||||||||||||||||||||| | |||||||||||||||| |||||| ||||||||    
T  18836257 ttttggtgtattcaaaatctgaggaagagcatgctgagcatttgaggattgtgttgcaagtcttggaagagaaccagttatgtgctaagttatctaagtg 18836356  T
Q  253 tgagttttg 261  Q
    |||||||||    
T  18836357 tgagttttg 18836365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 19985809 - 19985873
Alignment:
Q  197 aggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19985809 aggattgtgttgcaggtcttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttg 19985873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 225
Target Start/End: Complemental strand, 19881315 - 19881158
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| |||||||||||||||||||| || |||||| |||| |||||    |||||||| ||||| || ||||| |||||| | |||||||    
T  19881315 aatgcgcctggtgtgttcatggagtatatgaataggatttttcatgcttacctggataaatttgtggttgtgttcattgatgacattttgatctattcga 19881216  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaa 225  Q
     |  ||||||||||||||| || |||   |||||||| |||||||| ||||| |||||    
T  19881215 gaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaa 19881158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 18578097 - 18578033
Alignment:
Q  197 aggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||||||||||||| |||||||| ||||||| |||||||||||||| |||||||||    
T  18578097 aggattgtgttgcaagtcttgaaagagaaccaattatgtgctaagttgtctaagtatgagttttg 18578033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 258
Target Start/End: Original strand, 34643865 - 34644040
Alignment:
Q  83 ttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagc 182  Q
    ||||||||||||||||||||||| |||||| ||||||||||    |||||||| ||||  || ||||| |||||| | ||||||| |   ||||||||||    
T  34643865 ttcatggagtatatgaatagaatttttcatgcttatctggataaatttgtggttgtgtacattgatgacattttgatctattcgacaacggaggaagagc 34643964  T
Q  183 atgctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagtt 258  Q
    |||| || |||  ||| |||||||||||||| ||||| |||||  |||| | ||  || ||||| |||||||||||    
T  34643965 atgcagaacatctaagaattgtgttgcaagtattgaaagagaagaagttgtatgccaaattgtcgaagtgtgagtt 34644040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 193
Target Start/End: Original strand, 14643721 - 14643877
Alignment:
Q  41 tattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtg---- 136  Q
    |||| ||||||||||||||| ||  |  ||||||  |||||||||||||| |||||||||||||| || ||||||||| |||| |  |||||||||        
T  14643721 tattctgtgatgccatttggtgttactgatgcgcatggtgtcttcatggaatatatgaatagaatcttccatccttatttggatcagtttgtggtggcgc 14643820  T
Q  137 gtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcat 193  Q
    | | ||||||  || || |||||||||||||| ||| |||| || ||||||||||||    
T  14643821 gcgcttataggcgacatcttggtgtattcgaagtataaggaggaccatgctgagcat 14643877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 213
Target Start/End: Original strand, 23086035 - 23086180
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| || |||||||| |||||| | || |||||| | ||| |||| || || ||||| ||||| || |||||||||||| | || || |    
T  23086035 aatgcgccgggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttggatcgcttcgtggttgtgttcatcgatgatattttgatatactcta 23086134  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagt 213  Q
    | ||||| ||||| |||||||||||||  | |||||| ||||||||    
T  23086135 agtatgaagaagaacatgctgagcatttgaagattgttttgcaagt 23086180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 23025959 - 23026007
Alignment:
Q  17 cgaacgacgtatggacactataagtattatgtgatgccatttggagtat 65  Q
    ||||||| ||||||||||||| |||||| ||||||||||||||||||||    
T  23025959 cgaacgaggtatggacactatgagtattctgtgatgccatttggagtat 23026007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 221
Target Start/End: Original strand, 19487582 - 19487689
Alignment:
Q  114 cttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaaggattgtgttgcaagt 213  Q
    ||||| |||| || |||||||| || ||||| ||||| || ||| | ||||| || | ||| ||||||||||| ||||||| || |||||||||||||||    
T  19487582 cttatttggatcggtttgtggttgtttttattgatgacatcttgatttattctaagtctgaagaagagcatgcagagcatttaaagattgtgttgcaagt 19487681  T
Q  214 cttgaagg 221  Q
     |||||||    
T  19487682 gttgaagg 19487689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 219
Target Start/End: Complemental strand, 25769861 - 25769710
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| || ||||||||||||||  |||| || ||| |||||| |||    |||||||| |||||||| ||||||||  |  | ||||| |    
T  25769861 aatgcgcctggtgtatttatggagtatatgaaccgaattttccatgcttatccggataaatttgtggttgtgtttattgatgatatcctaatttattcta 25769762  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaa 219  Q
    | ||||| ||||||||||| ||||||   | ||||||||||||||| |||||    
T  25769761 agtatgaagaagagcatgcagagcatctgaagattgtgttgcaagtgttgaa 25769710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 215 - 261
Target Start/End: Complemental strand, 16234898 - 16234852
Alignment:
Q  215 ttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||| |||||||||| |||||||||||||||||| |||||    
T  16234898 ttgaaggagaatcagttatgtgctaagttgtctaagtgtgaattttg 16234852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 261
Target Start/End: Original strand, 14378180 - 14378373
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| |||||||||||||||||  |||| || ||| ||| ||||||    |||||||| || ||||| ||||||| | || | ||||| |    
T  14378180 aatgcgcctggtgtgttcatggagtatatgaaccgaattttacatgcttttctggataaatttgtggttgtatttattgatgatagtctgatttattcta 14378279  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    |   ||| || |||||||| ||||||   | |||||| |||||||||||||| |||||  |||| | ||  |||||||| || |||||||||||    
T  14378280 agactgaagaggagcatgcagagcatctgaagattgtattgcaagtcttgaaagagaaaaagttgtatgccaagttgtcgaaatgtgagttttg 14378373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 261
Target Start/End: Original strand, 14379730 - 14379923
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| |||||||||||||||||  |||| || ||| ||| ||||||    |||||||| || ||||| ||||||| | || | ||||| |    
T  14379730 aatgcgcctggtgtgttcatggagtatatgaaccgaattttacatgcttttctggataaatttgtggttgtatttattgatgatagtctgatttattcta 14379829  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    |   ||| || |||||||| ||||||   | |||||| |||||||||||||| |||||  |||| | ||  |||||||| || |||||||||||    
T  14379830 agactgaagaggagcatgcagagcatctgaagattgtattgcaagtcttgaaagagaaaaagttgtatgccaagttgtcgaaatgtgagttttg 14379923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 219
Target Start/End: Original strand, 28281080 - 28281228
Alignment:
Q  71 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaat 170  Q
    ||||| ||||| |||||||||||||||||| |||| |||||| ||| ||||||    || |||||||| ||||| ||||| ||| || | ||||||||      
T  28281080 gcgccgggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgacattctgatttattcgaaga 28281179  T
Q  171 atgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaa 219  Q
     ||| | ||||||||| || |||   || |||||||||||||| |||||    
T  28281180 ctgaaggagagcatgcagaacatctgagaattgtgttgcaagttttgaa 28281228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 213
Target Start/End: Complemental strand, 23080468 - 23080341
Alignment:
Q  86 atggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatg 185  Q
    |||||||| |||||| | || |||||| | | ||| || ||||| ||||| ||||| || |||||||||||| | || || || | ||||||||| ||||    
T  23080468 atggagtacatgaatcgcatttttcatgcatttctagatcgtttcgtggttgtgttcatcgatgatattttgatttactccaagtctgaggaagaacatg 23080369  T
Q  186 ctgagcattaaaggattgtgttgcaagt 213  Q
    |||||||||  | |||||| ||||||||    
T  23080368 ctgagcatttgaagattgttttgcaagt 23080341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 261
Target Start/End: Complemental strand, 21929074 - 21929028
Alignment:
Q  215 ttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||| ||||| |||| ||||||||| ||||||||||||||    
T  21929074 ttgaaggagaatcagttgtgtgctaagttgtcaaagtgtgagttttg 21929028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 222
Target Start/End: Complemental strand, 24366429 - 24366275
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||| ||||||||| || |||||||| |||||  |||| || ||| ||| ||||||    ||||| ||||||||||| |||||||||||  | ||||| |    
T  24366429 aatgtgccaggtgtatttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattcca 24366330  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaagga 222  Q
    |  ||||||| |||||||| |||||    || ||||| |||||||| ||||||||    
T  24366329 agaatgaggaggagcatgcagagcacctgagaattgtattgcaagtgttgaagga 24366275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 23507818 - 23507558
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||| ||||||||||| ||||| || ||||||    
T  23507818 atccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggaatacatgaat 23507719  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||  ||||    
T  23507718 agaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgagga 23507619  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||| ||||| |||||||||| |||||  |||||||||||||||||||||||    
T  23507618 ttgtgttgcaagtattgaaagagaaccagtgatgtgcaaagttgtctaagtgtgagttttg 23507558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 21935422 - 21935682
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||| ||||||||||| | ||||||||||||| |||||| ||||||||||||||||||||| ||||| ||||||||||| ||||| || ||||||    
T  21935422 atccaaaactgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggaatacatgaat 21935521  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||||||  ||||    
T  21935522 agaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgagga 21935621  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||||||||| ||||||||||| ||||  |||||||||||||||||||||||    
T  21935622 ttgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttg 21935682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 24583344 - 24583084
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| ||||| || ||||||    
T  24583344 atccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaat 24583245  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||||||  || |    
T  24583244 agaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcaaagtttgaggaagagcatgctgagcatttgagaa 24583145  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||||||||| ||||||||||| || |  |||||||||||||||||||||||    
T  24583144 ttgtgttgcaagtcttgaaagagaaccagttgtgcgccaagttgtctaagtgtgagttttg 24583084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 157
Target Start/End: Complemental strand, 20777977 - 20777891
Alignment:
Q  71 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttg 157  Q
    ||||| ||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||||||||||||||||||||||||||||    
T  20777977 gcgcctggtgtattcatggagtatatgaaccgaattttccatgcttttctggataaatttgtggtggtgtttatagatgatattttg 20777891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 154
Target Start/End: Complemental strand, 21409219 - 21409133
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatatt 154  Q
    ||||||||||| || || ||||| ||||||||| | || |||||| ||||||| || |||||||| || ||||||||||||||||||    
T  21409219 aatgcgccaggagtatttatggaatatatgaattgtatttttcatacttatctagatcgttttgttgttgtgtttatagatgatatt 21409133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 225
Target Start/End: Original strand, 21679079 - 21679236
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| ||||||||||||||||| ||||| ||||||  ||| || ||    |||||||| || || || ||||| |||||| | |||||||    
T  21679079 aatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgtttacctagataaatttgtggttgtattcattgatgacattttgatctattcga 21679178  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaa 225  Q
     |  ||||||||||||||| || |||   |||||||| |||||||| ||||| |||||    
T  21679179 gaactgaggaagagcatgcagaacatccgaggattgtattgcaagtattgaaagagaa 21679236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 153
Target Start/End: Complemental strand, 20823517 - 20823435
Alignment:
Q  71 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatat 153  Q
    ||||| ||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||||||||||||||||||||||||    
T  20823517 gcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttttctggataaatttgtggtggtgtttatagatgatat 20823435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 258
Target Start/End: Complemental strand, 23473312 - 23473122
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||||||||| |  |||||||| |||||| | || |||||| | | | |||| ||||| ||||| ||||| || || ||||||||| |||| || |    
T  23473312 aatgcgccaggtgtgtctatggagtacatgaatcgtatttttcatgcatttttggatcgtttcgtggttgtgttcatcgacgatattttgatgtactcaa 23473213  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagtt 258  Q
    | | ||| ||||| |||||||||| || ||   |||| ||||||||  |||| |||||  |||||| || ||| ||||| |||||||||||    
T  23473212 agtctgaagaagaacatgctgagcgtttaaaagttgttttgcaagtgctgaaagagaagaagttatatgctaaattgtcaaagtgtgagtt 23473122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 215 - 261
Target Start/End: Complemental strand, 23505164 - 23505118
Alignment:
Q  215 ttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||| | |||||||| ||||||||||||||||||||||||    
T  23505164 ttgaaggagaatcggttatgtgctaagttgtctaagtgtgagttttg 23505118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 224
Target Start/End: Complemental strand, 22464003 - 22463862
Alignment:
Q  83 ttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagc 182  Q
    |||||||||||||||||  |||| || ||| ||| ||||||    ||||||||||| |||||||||||||||||| | ||||| |||  ||| || ||||    
T  22464003 ttcatggagtatatgaaccgaattttccatgcttttctggataaatttgtggtggtatttatagatgatattttgatttattctaaaactgaagaggagc 22463904  T
Q  183 atgctgagcattaaaggattgtgttgcaagtcttgaaggaga 224  Q
    |||| || || |  | ||||||||||||  | ||||||||||    
T  22463903 atgcagaacacttgaagattgtgttgcagattttgaaggaga 22463862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 219
Target Start/End: Original strand, 17267638 - 17267786
Alignment:
Q  71 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaat 170  Q
    ||||| ||||| |||||||||||||||||| |||| |||||| | | ||||||    ||||||||||| ||||| ||||||||| || | ||||| ||      
T  17267638 gcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcctttctggataaatttgtggtggtatttattgatgatattctgatttattcaaaga 17267737  T
Q  171 atgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaa 219  Q
     ||| ||||||||||| || ||    || |||||||||||||| |||||    
T  17267738 ctgaagaagagcatgcagaacacctgagaattgtgttgcaagtgttgaa 17267786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 147
Target Start/End: Original strand, 20250528 - 20250664
Alignment:
Q  11 gcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaatagaatatttc 110  Q
    ||||| ||||| | ||||||||| ||| |||||| | | ||||||||||| ||| | || | | |||||  ||| ||||| ||||||||||| || || |    
T  20250528 gcgtttcgaacaaggtatggacattatgagtattttattatgccatttggtgtaactaacgtgtcaggtaactttatggaatatatgaataggattttcc 20250627  T
Q  111 atccttatctggaccgttttgtggtggtgtttataga 147  Q
    |||||||| |||| |  |||||||||||| |||||||    
T  20250628 atccttatttggatcaatttgtggtggtgcttataga 20250664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 222
Target Start/End: Original strand, 24796698 - 24796852
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| || |||||||| |||||  |||| || ||| ||| ||||||    ||||| ||||||||||| ||||||||| |  | ||||| |    
T  24796698 aatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattctaatttattcca 24796797  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaagga 222  Q
    |  ||||||| |||||||| ||||||   || || ||||||||||| ||||||||    
T  24796798 agaatgaggaggagcatgcagagcatctgagaatagtgttgcaagtgttgaagga 24796852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 28893246 - 28893328
Alignment:
Q  71 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatat 153  Q
    ||||| ||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||||||||| ||||||||||||||    
T  28893246 gcgccgggtgtgttcatggagtatatgaaccgaattttccatgcttttctggataaatttgtggtggtatttatagatgatat 28893328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 28914717 - 28914799
Alignment:
Q  71 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatat 153  Q
    ||||| ||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||||||||| ||||||||||||||    
T  28914717 gcgccgggtgtgttcatggagtatatgaaccgaattttccatgcttttctggataaatttgtggtggtatttatagatgatat 28914799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 28922072 - 28922154
Alignment:
Q  71 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatat 153  Q
    ||||| ||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||||||||| ||||||||||||||    
T  28922072 gcgccgggtgtgttcatggagtatatgaaccgaattttccatgcttttctggataaatttgtggtggtatttatagatgatat 28922154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 28929985 - 28930067
Alignment:
Q  71 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatat 153  Q
    ||||| ||||| |||||||||||||||||  |||| || ||| ||| ||||||    ||||||||||| ||||||||||||||    
T  28929985 gcgccgggtgtgttcatggagtatatgaaccgaattttccatgcttttctggataaatttgtggtggtatttatagatgatat 28930067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 258
Target Start/End: Original strand, 20466478 - 20466590
Alignment:
Q  146 gatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgt 245  Q
    |||||||||||| | || || || | ||| ||||| |||| ||||||||  | |||||| ||||||||  ||||||||||  |||||| ||  |||||||    
T  20466478 gatgatattttgatatactctaagtctgaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaggagaagaagttatatgccaagttgt 20466577  T
Q  246 ctaagtgtgagtt 258  Q
    | |||||||||||    
T  20466578 caaagtgtgagtt 20466590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 184; Significance: 1e-99; HSPs: 2)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 13 - 260
Target Start/End: Original strand, 1013 - 1260
Alignment:
Q  13 gttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaatagaatatttcat 112  Q
    ||||||||||| ||||||||||||| |||||| |||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  1013 gttccgaacgaggtatggacactatgagtattctgtgatgccatttgcagtatccaatgcgccaggtatcttcatggaatatatgaatagaatatttcat 1112  T
Q  113 ccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaaggattgtgttgcaag 212  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||  ||||||||||||||||    
T  1113 ccttatctggaccgttttatggtggtgtttatagatgatattttggtgtattcgaagtctgaggaggagcatgctgagcatttgaggattgtgttgcaag 1212  T
Q  213 tcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagtttt 260  Q
    |||||||||||||||| ||||||| ||| ||||| |||||||||||||    
T  1213 tcttgaaggagaaccaattatgtgctaaattgtcgaagtgtgagtttt 1260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 215 - 261
Target Start/End: Complemental strand, 4571 - 4525
Alignment:
Q  215 ttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||||||    
T  4571 ttgaaggagaatcagttgtgtgctaagttgtctaagtgtgagttttg 4525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 181; Significance: 7e-98; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 5 - 261
Target Start/End: Complemental strand, 16305 - 16049
Alignment:
Q  5 aaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaatagaa 104  Q
    ||||||||||||||||||| ||||||||||||| |||||| ||||||||||||| |||||||||||||| |||||||||||||||| || ||||||||||    
T  16305 aaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccattttgagtatccaatgcgtcaggtgtcttcatggaatacatgaatagaa 16206  T
Q  105 tatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaaggattgt 204  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||| ||||||| ||||||||  ||||||||    
T  16205 tatttcaaccttatctggaccgttttgtggtgatgtttatagatgatattttggtgtattcgaagtctgaggaggagcatgttgagcatttgaggattgt 16106  T
Q  205 gttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    |||||||||||||||||||||||||||||||| |||||||| || |||||| |||||    
T  16105 gttgcaagtcttgaaggagaaccagttatgtgctaagttgtttacgtgtgaattttg 16049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 178; Significance: 4e-96; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 4 - 261
Target Start/End: Original strand, 21905 - 22161
Alignment:
Q  4 caaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaataga 103  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||  |||||||||||| ||||||||||||||||| ||||||||||||    
T  21905 caaaaccgcgttccgaacgaggtatggacactatgagtattatgtgatgccatttaaagtatccaatgcaccaggtgtcttcatggaatatatgaataga 22004  T
Q  104 atatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaaggattg 203  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||  |||||||    
T  22005 atatttcatccttatctggactgttttgtggtggtttttatagatgatattttggtgtattcgaagtttgaggaagagcatgctgagcatttgaggattg 22104  T
Q  204 tgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    |  ||| | ||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  22105 t-atgcgaatcttgaacgagaaccagttatgtgctaagttgtcgaagtgtgagttttg 22161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 4 - 261
Target Start/End: Original strand, 31481 - 31737
Alignment:
Q  4 caaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaataga 103  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||  |||||||||||| ||||||||||||||||| ||||||||||||    
T  31481 caaaaccgcgttccgaacgaggtatggacactatgagtattatgtgatgccatttaaagtatccaatgcaccaggtgtcttcatggaatatatgaataga 31580  T
Q  104 atatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaaggattg 203  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||  |||||||    
T  31581 atatttcatccttatctggactgttttgtggtggtttttatagatgatattttggtgtattcgaagtttgaggaagagcatgctgagcatttgaggattg 31680  T
Q  204 tgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    |  ||| | ||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  31681 t-atgcgaatcttgaacgagaaccagttatgtgctaagttgtcgaagtgtgagttttg 31737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 28 - 261
Target Start/End: Complemental strand, 7438 - 7205
Alignment:
Q  28 tggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgt 127  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  7438 tggacactatgagtattatgtgatgccatttggagtatctaatgcgccaggtgtcttcatggagtatatgaatataatatttcatccttatctgaaccgt 7339  T
Q  128 tttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaacc 227  Q
    |||||||||| ||| ||||||||||||||||| |||||||||| |||||| ||||||| |||||||   |||||||||||| ||||||| || |||||||    
T  7338 tttgtggtggagttcatagatgatattttggtatattcgaaatctgaggaggagcatgttgagcatatgaggattgtgttgtaagtcttaaaagagaacc 7239  T
Q  228 agttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||| ||||||||||||||||||||||||    
T  7238 agttatgtgctaagttgtctaagtgtgagttttg 7205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 7916 - 8176
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||| ||||||||||| ||||| || ||||||    
T  7916 atccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggaatacatgaat 8015  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |  ||||||||||||| |||||||   ||||    
T  8016 agaatatttcatccttatctggaccgttttttggtggtgtttatagatgatattttagtgtattcgaagtcggaggaagagcatgttgagcatctgagga 8115  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||| ||||| |||||||||||||||| ||||||||||||||||| ||||||    
T  8116 ttgtgttgcaagttttgaaagagaaccagttatgtgctaagttgtctaagtgtgtgttttg 8176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 177; Significance: 2e-95; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 2007 - 2267
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    |||||||||||| |||||||||| |||| |||||||| |||||| ||||||||||||||||||||| ||||| ||||||||||| ||||| || ||||||    
T  2007 atccaaaaccgcattccgaacgaggtatagacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggaataaatgaat 2106  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||||||  ||||    
T  2107 agaatatttcatccttatctggaccattttgtggtggtgttaatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgagga 2206  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    || ||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  2207 ttatgttgcaggtcttgaaagagaaccagttatgtgctaagttgtctaagtgtgagttttg 2267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 26578 - 26411
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    |||||| ||||| |||||||| | ||||||||||||| |||||| ||||||| ||||| ||||||| ||||||||||||||||||||||| |||||||||    
T  26578 atccaataccgctttccgaacaaggtatggacactatgagtattctgtgatgtcatttagagtatctaatgcgccaggtgtcttcatggaatatatgaat 26479  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaa 168  Q
    |||||||||||||||| ||||||||||||||||||| |||||||  |||| |||||||||||||||||    
T  26478 agaatatttcatccttttctggaccgttttgtggtgatgtttatttatgacattttggtgtattcgaa 26411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 177; Significance: 2e-95; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 15291210 - 15291470
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| ||||| || ||||||    
T  15291210 atccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttatggaatacatgaat 15291309  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    | ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||||||  ||||    
T  15291310 aaaatatttcatccttatctggaccattttgtggtggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgagga 15291409  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||||||||| ||||||||||| || |  |||||||||||||||||||||||    
T  15291410 ttgtgttgcaagtcttgaaagagaaccagttgtgcgccaagttgtctaagtgtgagttttg 15291470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 12340917 - 12341138
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    |||||||||||||||||||||   | ||||||||||| |||||| ||||||||||||||||||  | ||||||||||||||||||||||| |||||||||    
T  12340917 atccaaaaccgcgttccgaacagggaatggacactatgagtattctgtgatgccatttggagtgactaatgcgccaggtgtcttcatggaatatatgaat 12341016  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    || ||||| ||||||| ||||||| ||||||||||  | ||||| |||||||| || |||||| |||| |  ||||| |||||||||||||||   ||||    
T  12341017 aggatattccatccttttctggactgttttgtggtaatatttatcgatgatatcttcgtgtatacgaagtcagaggaggagcatgctgagcatctgagga 12341116  T
Q  201 ttgtgttgcaagtcttgaagga 222  Q
    |||||||||  |||||||||||    
T  12341117 ttgtgttgcgtgtcttgaagga 12341138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 77 - 222
Target Start/End: Complemental strand, 8708055 - 8707910
Alignment:
Q  77 ggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgagg 176  Q
    ||||| || |||||||| ||||||||||| || ||| ||||| |||| || |||||||| |||||||| ||||| || ||| | ||||| || | ||| |    
T  8708055 ggtgtgtttatggagtacatgaatagaattttccatgcttatttggatcggtttgtggttgtgtttattgatgacatcttgatttattctaagtctgaag 8707956  T
Q  177 aagagcatgctgagcattaaaggattgtgttgcaagtcttgaagga 222  Q
    |||||||||| |||||||| |   ||||||||||||| ||||||||    
T  8707955 aagagcatgcagagcattagaaagttgtgttgcaagtgttgaagga 8707910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 255
Target Start/End: Original strand, 8322955 - 8323082
Alignment:
Q  128 tttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaacc 227  Q
    |||||||||||||| ||||| |||||||||||||||||||| |  ||||| |||||||| ||||||   || ||||| ||| |  |||||||||||||      
T  8322955 tttgtggtggtgttcatagacgatattttggtgtattcgaagttggaggaggagcatgcagagcatctgagaattgtattggagatcttgaaggagaaga 8323054  T
Q  228 agttatgtgttaagttgtctaagtgtga 255  Q
    | || | || ||||||||| ||||||||    
T  8323055 aattgtatgctaagttgtcgaagtgtga 8323082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 225
Target Start/End: Original strand, 51604914 - 51605068
Alignment:
Q  71 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaat 170  Q
    ||||| ||||| |||||||||||||||||| |||| |||||| ||| ||||||    || |||||||| ||||| ||||||||| || | ||||||||      
T  51604914 gcgcccggtgtgttcatggagtatatgaatcgaatttttcatgcttttctggataaattcgtggtggtatttattgatgatattctgatttattcgaaga 51605013  T
Q  171 atgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaa 225  Q
     ||| ||||||||||| || |||   || |||||| ||||||| ||||| |||||    
T  51605014 ctgaagaagagcatgcagaacatctgagaattgtgctgcaagttttgaaagagaa 51605068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 258
Target Start/End: Complemental strand, 14696308 - 14696076
Alignment:
Q  26 tatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggacc 125  Q
    |||||||| ||| | ||||  |||||||| ||||| ||  | |||||||||||||| || |||||||| |||||    || |||||| | ||| ||||      
T  14696308 tatggacattattaatattcagtgatgccttttggtgttacaaatgcgccaggtgtgtttatggagtacatgaactctatttttcatgcgtatttggatt 14696209  T
Q  126 gttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaa 225  Q
    | || ||||| ||||| || |||||||||||| | || ||||| |  || ||||| |||||||||||||  | |||||| ||||||||  |||| |||||    
T  14696208 gcttcgtggttgtgttcattgatgatattttgatatactcgaagtccgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaagagaa 14696109  T
Q  226 ccagttatgtgttaagttgtctaagtgtgagtt 258  Q
      | |||| || ||||||||| |||||||||||    
T  14696108 gaatttatatgctaagttgtcaaagtgtgagtt 14696076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 44659988 - 44660139
Alignment:
Q  71 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaat 170  Q
    ||||| ||||| || |||||||| |||||| |||| || ||| ||| ||||||    ||||| ||||||||||| || ||||||||  | ||||| ||      
T  44659988 gcgcctggtgtatttatggagtacatgaatcgaatcttccatgcttttctggataagtttgttgtggtgtttattgacgatattttaatctattccaaga 44660087  T
Q  171 atgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaagga 222  Q
    ||||||| |||||||| ||||||   || |||||||||||||| ||||||||    
T  44660088 atgaggaggagcatgcagagcatctgagaattgtgttgcaagtgttgaagga 44660139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 222
Target Start/End: Original strand, 3262913 - 3263067
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| || |||||||| |||||  |||| || ||| ||| ||||||    ||||| ||||||||||| |||||||||||  | ||||| |    
T  3262913 aatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattcca 3263012  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaagga 222  Q
    |  ||||||| |||||||| ||||||   || ||||| |||||||| ||||||||    
T  3263013 agaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaagga 3263067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 215 - 261
Target Start/End: Complemental strand, 9292841 - 9292795
Alignment:
Q  215 ttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||| ||||||||||  |||||||||||||||||||||||    
T  9292841 ttgaaggagaatcagttatgtgcgaagttgtctaagtgtgagttttg 9292795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 255
Target Start/End: Original strand, 14849225 - 14849412
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||||||||| || |||||||| |||||| | || |||||| | | | |||| || || ||||| ||||| || || ||||||||| | || || |    
T  14849225 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggatcgcttcgtggttgtgttcatcgacgatattttgatatactcca 14849324  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtga 255  Q
    | |  || ||||| |||| ||||||||  | |||||| ||||||||  ||||||||||  |||||| || ||| ||||| ||||||||    
T  14849325 agtccgaagaagaacatgttgagcatttgaagattgttttgcaagtgctgaaggagaagaagttatatgctaaattgtcaaagtgtga 14849412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 219
Target Start/End: Original strand, 15001484 - 15001635
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| | ||| || ||||||||||||||  |||| || ||| ||||||||||    |||||||| |||||||| ||||| || ||| | ||||| |    
T  15001484 aatgcgcctgttgtgtttatggagtatatgaaccgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttgatttattcta 15001583  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaa 219  Q
    |   ||| ||||||||||| || |||   ||||||||||||||||| |||||    
T  15001584 agattgaagaagagcatgcagaacatctgaggattgtgttgcaagtgttgaa 15001635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 219
Target Start/End: Complemental strand, 15323370 - 15323219
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| || ||||| || ||||||||||| || ||| ||||||||||    |||||||| |||||||| ||||||||| |  | ||||| |    
T  15323370 aatgcgcctggtgtgtttatggaatacatgaatagaattttccatgcttatctggataaatttgtggttgtgtttattgatgatattgtaatttattcta 15323271  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaa 219  Q
    |   ||| ||||||||||| ||||||   |  |||||||||||||| |||||    
T  15323270 agagtgaagaagagcatgcagagcatctgaaaattgtgttgcaagtgttgaa 15323219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 261
Target Start/End: Complemental strand, 14999321 - 14999275
Alignment:
Q  215 ttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||| ||||| |||| |||||||||||||||||| |||||    
T  14999321 ttgaaggagaatcagttctgtgctaagttgtctaagtgtgaattttg 14999275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 175; Significance: 3e-94; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 5861 - 6123
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggag-tatatgaa 99  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| || ||  || |||||    
T  5861 atccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtgtctttattgaaatacatgaa 5960  T
Q  100 ta-gaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaag 198  Q
    || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||  ||    
T  5961 taagaatatttcatccttatctggaccgttttgtggtggtgttcatagatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgag 6060  T
Q  199 gattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||||||||||| ||||||||||| ||||  |||||||||||||||||||||||    
T  6061 gattgtgttgcaagtcttgaaagagaaccagttgtgtgccaagttgtctaagtgtgagttttg 6123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1488 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: scaffold1488
Description:

Target: scaffold1488; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 858 - 1117
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||| | ||||||||||| ||||| ||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  858 atccaaaactgtgttccgaacgaggtatgaacactatgagtattctgtgatgccatttggagtatccaatgcgccagttgtcttcatggaatatatgaat 957  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||| | |||||| ||||||||||||||||  ||||    
T  958 agaatatttcatccttatttggaccattttgtggtggtgtttatagatgata-tttggtgtattcgaagtctgaggaggagcatgctgagcatttgagga 1056  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||| ||||| |||||||||||||||| ||||||||| |||||||| |||||    
T  1057 ttgtgttgcaagttttgaaagagaaccagttatgtgctaagttgtcgaagtgtgaattttg 1117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 8881 - 9141
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||||||||| ||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||| ||||||||||| ||||  || ||||||    
T  8881 atccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatgggatacatgaat 8980  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||| || | |||||||||||||||||||||||  ||||    
T  8981 agaatatttcatccttatctggatcgttttgtgatggtgttcatagatgatattttggtgtattcaaagtctgaggaagagcatgctgagcatttgagga 9080  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||| ||||| |||||| |||||||||||||||| |||||||||||||||||    
T  9081 ttgtgttgcaagtattgaaagagaactagttatgtgttaagttatctaagtgtgagttttg 9141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 173; Significance: 4e-93; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 132544 - 132804
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    |||| ||||||||||||||||||  |||||||||||| |||| | ||||||||||||||||||||| |||||||| |||||||| ||||| || ||||||    
T  132544 atcccaaaccgcgttccgaacgagatatggacactatgagtactctgtgatgccatttggagtatctaatgcgcccggtgtctttatggaatacatgaat 132643  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    ||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||| | |||||||||||||||||||||||  ||||    
T  132644 agaatattttatccttatctggactgttttgtggtggtctttatagatgatattttagtgtattcgaagtttgaggaagagcatgctgagcatttgagga 132743  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  132744 ttgtgttgcaagttttgaaagagaaccagttatgtgctaagttgtctaagtgtgagttttg 132804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 136 - 261
Target Start/End: Complemental strand, 25942 - 25817
Alignment:
Q  136 ggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgt 235  Q
    |||||| ||||||||||||||||| |||||||||| ||||||||| |||||||||||||  ||||||||||||||||  ||||||||||||||| |||||    
T  25942 ggtgttcatagatgatattttggtatattcgaaatctgaggaagaacatgctgagcatttgaggattgtgttgcaagatttgaaggagaaccagctatgt 25843  T
Q  236 gttaagttgtctaagtgtgagttttg 261  Q
    | ||||||  ||||||||||||||||    
T  25842 gctaagtttcctaagtgtgagttttg 25817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 26018 - 25938
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgt 81  Q
    ||||| ||||||||||| ||||| ||||||||||||| |||||| ||||||||||||| |||||| |||||||||||||||    
T  26018 atccataaccgcgttccaaacgaagtatggacactatgagtattctgtgatgccatttagagtatgcaatgcgccaggtgt 25938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 7060 - 7316
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||| ||||||| ||||| |||||||||||||  ||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  7060 atccaaaacagcgttccaaacgaggtatggacactatgggtattctgtgatgccatttggagtatccaatgcgccaggtatcttcatggaatatatgaat 7159  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||          
T  7160 agaatatttcatccttatatggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatctgaggaggagcatgctgagcatt----tt 7255  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||| | | ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  7256 ttgtgctacgagtcttgaaggagaatcagttatgtgttaagttgtctaagtttgagttttg 7316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 161; Significance: 6e-86; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 1939 - 2190
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    |||||||||||||||| || ||| ||||||||||||| ||||||  |||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  1939 atccaaaaccgcgttctgatcgaggtatggacactatgagtattcggtgatgccatttggagtatctaatgcaccaggtgtcttcatggagtatatgaat 2038  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||          |||||||  ||||    
T  2039 agaatatttcatccttatctggactgttttgtggtggtgttcatagatgatattttggtgtattcgaaatctgagga---------cgagcatttgagga 2129  T
Q  201 ttgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  2130 ttgtgttgcaagtcttgaaagagaaccagttatgtgcaaagttgtctaagtgtgagttttg 2190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 153; Significance: 4e-81; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 1676 - 1888
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaat 100  Q
    ||||||||||||||||||||| | ||||||| ||||| ||||||  || |||||||||||||| |||||||||||||||||||| ||||| || ||||||    
T  1676 atccaaaaccgcgttccgaacaaggtatggaaactatgagtattccgtaatgccatttggagtttccaatgcgccaggtgtctttatggaatacatgaat 1775  T
Q  101 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaagga 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||  ||||    
T  1776 agaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaagtctgaggaagagcatgctgagcatttgagga 1875  T
Q  201 ttgtgttgcaagt 213  Q
    |||||||||||||    
T  1876 ttgtgttgcaagt 1888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 260
Target Start/End: Complemental strand, 9143 - 8887
Alignment:
Q  4 caaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaataga 103  Q
    |||||| || || ||||||| |||||| |||||| | || | ||||||| ||||||| ||  | |||||||  |||||||||||||| || |||||||||    
T  9143 caaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaataga 9044  T
Q  104 atatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaaggattg 203  Q
    || || ||||||||| |||| |  ||| |||||||||||||||| ||||| ||| |||||||||| |  ||||| |||||||| ||||||  ||||||||    
T  9043 atcttccatccttatttggatcagtttatggtggtgtttatagacgatatcttgatgtattcgaagtcagaggaggagcatgcagagcatctaaggattg 8944  T
Q  204 tgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagtttt 260  Q
    |||||||    ||||| |||||  |||| | || ||||||||| |||||||||||||    
T  8943 tgttgcatactttgaaagagaataagttgtttgataagttgtcaaagtgtgagtttt 8887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 108
Target Start/End: Complemental strand, 6984 - 6888
Alignment:
Q  12 cgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaatagaatatt 108  Q
    |||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||| ||||||||||| ||||| || ||||||||||||||    
T  6984 cgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccaggtgtctttatggaatacatgaatagaatatt 6888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 2319 - 2255
Alignment:
Q  197 aggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2319 aggattgtgttgcaagccttgaaggagaaccagttatgtgctaagttgtctaagtgtgagttttg 2255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 2190 - 2117
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgccatttggagtatccaatgcgc 74  Q
    ||||||||| | ||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  2190 atccaaaactgtgttccgaacgaggtatggacactatgagtattatgtgatgccatttggagtatctaatgcgc 2117  T

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Target: scaffold0730 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 258
Target Start/End: Original strand, 123 - 313
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| ||||||||||||||||||||||| |||||| ||||||||||    |||||||| ||||  || ||||| |||||| | |||||||    
T  123 aatgcgcctggtgtgttcatggagtatatgaatagaatttttcatgcttatctggataaatttgtggtagtgtacattgatgacattttgatctattcga 222  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagtt 258  Q
     |   |||||||||||||| || |||   || |||||||||||||| ||||| |||||  |||| | ||  || ||||| |||||||||||    
T  223 caacggaggaagagcatgcagaacatctgagaattgtgttgcaagtattgaaagagaagaagttgtatgccaaattgtcgaagtgtgagtt 313  T

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Target: scaffold0244 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 25028 - 25092
Alignment:
Q  197 aggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||| |||||    
T  25028 aggattgtgttgcaagtcttgaaggagaaccagttatgtgcaaagttatctaagtgtgaattttg 25092  T

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Target: scaffold0028 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 225
Target Start/End: Original strand, 48636 - 48793
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| ||||||||||||||||| ||||| |||||| |||| |||||    |||||||| || || || ||||| |||||| | |||||||    
T  48636 aatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattcga 48735  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaa 225  Q
     |  ||||||||||||||| || |||   |||||||| |||||||| ||||| |||||    
T  48736 gaactgaggaagagcatgcagaacatctgaggattgtattgcaagtattgaaagagaa 48793  T

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Target: scaffold0083 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 255
Target Start/End: Original strand, 9156 - 9343
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||||||||| || |||||||| |||||| | || |||||| | ||| | || ||||| ||||| ||||| || |||||||||||| | || || |    
T  9156 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttagatcgtttcgtggttgtgttcatggatgatattttgatatactcta 9255  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtga 255  Q
    | | ||| ||||| |||| ||||||||  |||||||| ||||||||  ||||||||||  |||||| ||  ||| |||| ||||||||    
T  9256 agtctgaagaagaacatgttgagcatttgaggattgttttgcaagtgctgaaggagaagaagttatatgccaagctgtcaaagtgtga 9343  T

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Target: scaffold0016 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 219
Target Start/End: Original strand, 176466 - 176617
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| || |||||||| ||||||||||| || ||| ||||| |||| || ||||| || || ||||| ||||| || ||| | ||||| |    
T  176466 aatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatttggatcggtttgttgttgtatttattgatgacatcttgatttattcta 176565  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaa 219  Q
    | | ||| ||||||||||| ||||||| || |||||||||| |||| |||||    
T  176566 agtctgaagaagagcatgcagagcatttaaagattgtgttgtaagtgttgaa 176617  T

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Target: scaffold0011 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 255
Target Start/End: Original strand, 24655 - 24842
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||||||||| || |||||||| |||||| | || |||||| | | | |||| ||||| ||||| ||||| || |||||||||||| | || ||||    
T  24655 aatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcatttttggaacgtttcgtggttgtgttcatcgatgatattttgatatactcga 24754  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtga 255  Q
    |   ||| ||||| |||||||||||||  | |||||| |||||||| ||||| |||||  |||||| || ||| || || ||||||||    
T  24755 agactgaagaagaacatgctgagcatttgaagattgttttgcaagtgttgaaagagaagaagttatatgctaaattatcaaagtgtga 24842  T

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Target: scaffold0585 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 219
Target Start/End: Original strand, 5211 - 5362
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| || |||||||| ||||||||||| || ||| ||||||||||    |||||||| |||||||| ||||||||  |  | ||||| |    
T  5211 aatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatctggataaatttgtggttgtgtttattgatgatatcctaatttattcta 5310  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaa 219  Q
    |  |||| ||||||||||| ||||||   | ||||||||||||||| |||||    
T  5311 agaatgaagaagagcatgcagagcatctgaagattgtgttgcaagtgttgaa 5362  T

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Target: scaffold0102 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 220
Target Start/End: Complemental strand, 41922 - 41728
Alignment:
Q  26 tatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggacc 125  Q
    ||||| |||||| | ||| | |||||||| || |||||  | |||||||| ||||| || |||||||||||||| ||||| || ||| ||||| ||||      
T  41922 tatggtcactatgaatataaggtgatgcctttcggagttactaatgcgcctggtgtgtttatggagtatatgaacagaattttgcatgcttatatggata 41823  T
Q  126 gttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaag 220  Q
      |||||||| |||||||| ||||| || ||  | ||||| ||  |||| ||||||||||| ||||||   | ||||||||||||||| ||||||    
T  41822 aatttgtggttgtgtttattgatgacatcttaatttattctaagaatgaagaagagcatgcagagcatctgaagattgtgttgcaagtgttgaag 41728  T

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Target: scaffold0090 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 21033 - 20915
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| ||||||||||||||||| ||||| |||||| | || |||||    ||||||||||| || || ||||| |||||| | ||||| |    
T  21033 aatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcctacctggataaatttgtggtggtattcattgatgacattttgatctattcta 20934  T
Q  168 aatatgaggaagagcatgc 186  Q
     | ||||||||||||||||    
T  20933 gaaatgaggaagagcatgc 20915  T

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Target: scaffold0090; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 186
Target Start/End: Complemental strand, 25195 - 25077
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| ||||||||||||||||| ||||| |||||| | || |||||    ||||||||||| || || ||||| |||||| | ||||| |    
T  25195 aatgcgcctggtgtgttcatggagtatatgaacagaatttttcatgcctacctggataaatttgtggtggtattcattgatgacattttgatctattcta 25096  T
Q  168 aatatgaggaagagcatgc 186  Q
     | ||||||||||||||||    
T  25095 gaaatgaggaagagcatgc 25077  T

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Target: scaffold0074 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 258
Target Start/End: Complemental strand, 5295 - 5106
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||||||||| |||||| |||| |||||| | || |||||| | ||| |||| || |||||||| ||||| || || ||||||||| | || || |    
T  5295 aatgcgccaggtgtgttcatg-agtacatgaatcgtatttttcatgcgtatttggatcgctttgtggttgtgttcattgacgatattttgatatactcca 5197  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagtt 258  Q
    |   ||| ||||| |||||||||||||  | |||||| ||||||||  |||| |||||  |||||| ||  |||||||| |||||||||||    
T  5196 agactgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaagagaagaagttatatgcaaagttgtcaaagtgtgagtt 5106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 76614 - 76482
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcat-------ccttatctggaccgttttgtggtggtgtttatagatgatattttggtg 160  Q
    |||| ||| ||||| |||||||||||||||||||| ||||| |||       |||||||||||||  ||| |||| ||||||||||| ||||| ||||||    
T  76614 aatgtgccgggtgttttcatggagtatatgaataggatattccatattccatccttatctggaccagtttttggtagtgtttatagacgatatcttggtg 76515  T
Q  161 tattcgaaatatgaggaagagcatgctgagcat 193  Q
    ||||| || |  ||||| ||||||| |||||||    
T  76514 tattcaaagtcagaggaggagcatgttgagcat 76482  T

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Target: scaffold0058; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 153
Target Start/End: Original strand, 27389 - 27455
Alignment:
Q  87 tggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatat 153  Q
    |||| ||||||||| | || |||||| ||||||| || |||||||| || |||||||||||||||||    
T  27389 tggaatatatgaatcgtatttttcatacttatctagatcgttttgttgttgtgtttatagatgatat 27455  T

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Target: scaffold0020 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 258
Target Start/End: Original strand, 99684 - 99874
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| |||||||||||||||||| |||| || ||| | ||||||||    |||||||| |||||||| ||||| ||| || | ||||| |    
T  99684 aatgcgcctggtgtgttcatggagtatatgaatcgaattttccatgcctatctggataaatttgtggttgtgtttattgatgacattctgatctattcta 99783  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagtt 258  Q
     |  ||| ||||||||||| || |||   | ||||||||||||| |  | || |||||  |||||| || ||||||||| |||||||||||    
T  99784 gaactgaagaagagcatgcagaacatctgaagattgtgttgcaaattctaaaagagaaaaagttatatgctaagttgtcgaagtgtgagtt 99874  T

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Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 222
Target Start/End: Original strand, 201594 - 201744
Alignment:
Q  72 cgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaata 171  Q
    |||| ||||| || |||||||| ||||||||||| || ||| ||||| |||| || |||||||| |||||||| |||||||||||| | || || ||       
T  201594 cgccgggtgtgtttatggagtacatgaatagaattttccatgcttatttggatcggtttgtggttgtgtttattgatgatattttgatatactctaagac 201693  T
Q  172 tgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaagga 222  Q
    ||| ||||| ||||| || ||||  | | ||||||||||||| ||||||||    
T  201694 tgaagaagaacatgcagaacatttgaaggttgtgttgcaagtgttgaagga 201744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0719 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0719
Description:

Target: scaffold0719; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 4838 - 4785
Alignment:
Q  1 atccaaaaccgcgttccgaacgacgtatggacactataagtattatgtgatgcc 54  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| | |||||||    
T  4838 atccaaaaccgcgttccgaacgaggtatggacactatgagtattctatgatgcc 4785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 11014 - 10861
Alignment:
Q  66 ccaatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattc 165  Q
    |||||||||| ||||| || |||||||| ||||||||||| || ||| ||||| |||| |  ||||| || |||||||| ||||| || ||| | |||||    
T  11014 ccaatgcgcctggtgtgtttatggagtacatgaatagaattttccatgcttatttggatcaatttgtagttgtgtttattgatgacatcttgatttattc 10915  T
Q  166 gaaatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaa 219  Q
     ||   ||| ||||||||| | ||||||| || |||||| |||||||| |||||    
T  10914 taagactgaagaagagcatacagagcatttaaagattgtattgcaagtgttgaa 10861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 225
Target Start/End: Complemental strand, 114743 - 114586
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| |||||||| |||||||||||||| |||||| |||| |||||    |||||||| || || || ||||| |||||| | ||||| |    
T  114743 aatgcgcctggtgtgttcatggaatatatgaatagaatttttcatgcttacctggataaatttgtggttgtattcattgatgacattttgatctattcaa 114644  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaa 225  Q
     |  ||||||||||||||| || |||   | |||||| |||||||| ||||| |||||    
T  114643 gaactgaggaagagcatgcagaacatctgatgattgtattgcaagtattgaaagagaa 114586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 219
Target Start/End: Complemental strand, 11977 - 11826
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| || |||||||||||||| ||||| |||||| | ||||||||    |||||||| |||||||| ||||||||  |  | ||||| |    
T  11977 aatgcgcctggtgtgtttatggagtatatgaacagaatttttcatgcctatctggataaatttgtggttgtgtttattgatgatatcctaatttattcta 11878  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaa 219  Q
    |  |||| ||||||||||| ||||||   | |||||| |||||||| |||||    
T  11877 agaatgaagaagagcatgcagagcatctgaagattgtattgcaagtgttgaa 11826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 215 - 261
Target Start/End: Original strand, 13093 - 13139
Alignment:
Q  215 ttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||||||    
T  13093 ttgaaggagaatcagttgtgtgctaagttgtctaagtgtgagttttg 13139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 222
Target Start/End: Original strand, 40455 - 40609
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| || |||||||| |||||  |||| || ||| ||| ||||||    ||||| ||||||||||| |||||||||||  | ||||| |    
T  40455 aatgcgcctggtgtttttatggagtacatgaaccgaattttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattcca 40554  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaagga 222  Q
    |  ||||||| |||||||| ||||||   || ||||| |||||||| ||||||||    
T  40555 agaatgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaagga 40609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 258
Target Start/End: Complemental strand, 495202 - 495012
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||||||||| || || ||||| |||||| | || |||||| | | | |||| ||||||||||| ||||| || || ||||||||| | || ||||    
T  495202 aatgcgccaggtgtgtttattgagtacatgaatcgtatttttcatgcgtttttggatcgttttgtggttgtgttcatcgacgatattttgatatactcga 495103  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagtt 258  Q
    | | ||| ||||| ||||||||| |||  | |||||| ||||||||  |||| |||||  || ||| || ||| ||||| |||| ||||||    
T  495102 agtctgaagaagaacatgctgagtatttgaagattgttttgcaagtgctgaaagagaagaagctatatgctaaattgtcaaagtctgagtt 495012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 2394 - 2519
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| |||||||||||||||||  |||| || ||| ||||| ||||    |||||||| |||||||| ||||||||| |  | ||||| |    
T  2394 aatgcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttatttggataaatttgtggttgtgtttattgatgatattctaatttattcta 2493  T
Q  168 aatatgaggaagagcatgctgagcat 193  Q
    |  |||| ||||||||||| ||||||    
T  2494 agaatgaagaagagcatgcagagcat 2519  T

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Target: scaffold0133 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 29407 - 29532
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||| ||||| |||||||||||||||||  |||| || ||| ||||| ||||    |||||||| |||||||| ||||||||| |  | ||||| |    
T  29407 aatgcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttatttggataaatttgtggttgtgtttattgatgatattctaatttattcta 29506  T
Q  168 aatatgaggaagagcatgctgagcat 193  Q
    |  |||| ||||||||||| ||||||    
T  29507 agaatgaagaagagcatgcagagcat 29532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 255
Target Start/End: Original strand, 6014 - 6198
Alignment:
Q  71 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaat 170  Q
    ||||||||||| || |||||||| |||||| | || || ||| | ||||| || ||||| ||||| ||||| || || ||||||||| | || || ||      
T  6014 gcgccaggtgtgtttatggagtacatgaatcgtattttccatgcatatctagatcgtttcgtggttgtgttcatcgacgatattttgatatactctaagg 6113  T
Q  171 atgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtga 255  Q
     ||| ||||| ||||||||||| |  | |||||| ||||||||  |||| |||||  |||||| || ||||||||| ||||||||    
T  6114 ctgaagaagaacatgctgagcaattgaagattgttttgcaagtgctgaaagagaagaagttatatgctaagttgtcaaagtgtga 6198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 261
Target Start/End: Original strand, 115172 - 115296
Alignment:
Q  137 gtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtg 236  Q
    ||||| || |||||||||||| | || || || | ||| ||||| |||||||||||||  | |||||| ||||||||  ||||||||||  |||||| ||    
T  115172 gtgttcatcgatgatattttgatatactctaagtctgaagaagaacatgctgagcatttgaagattgttttgcaagtgctgaaggagaagtagttatatg 115271  T
Q  237 ttaagttgtctaagtgtgagttttg 261  Q
      |||||||| |||||||| |||||    
T  115272 ccaagttgtcaaagtgtgaattttg 115296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 225
Target Start/End: Original strand, 195627 - 195766
Alignment:
Q  86 atggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatg 185  Q
    ||||||||||||||| | || || ||| | | |||||| ||||||||||| || ||||| |||||||||||| | || || || | ||| ||||| ||||    
T  195627 atggagtatatgaatcgcatcttccatgcatttctggatcgttttgtggttgtctttatcgatgatattttgatttactccaagtctgaagaagaacatg 195726  T
Q  186 ctgagcat-taaaggattgtgttgcaagtcttgaaggagaa 225  Q
    |||||||| | |||| |||| |||||||| ||||| |||||    
T  195727 ctgagcatctgaagg-ttgtcttgcaagtgttgaaagagaa 195766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 84659 - 84727
Alignment:
Q  86 atggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatatt 154  Q
    ||||| ||||||||| | || |||||| ||||||| || |||||||| || ||||||||||||||||||    
T  84659 atggaatatatgaatcgtatttttcatacttatctagatcgttttgttgttgtgtttatagatgatatt 84727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1486 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1486
Description:

Target: scaffold1486; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 212 - 165
Alignment:
Q  214 cttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    |||||||||||| ||||| |||| |||||| |||||||||||||||||    
T  212 cttgaaggagaatcagttgtgtgctaagttatctaagtgtgagttttg 165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 28751 - 28624
Alignment:
Q  26 tatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggacc 125  Q
    |||||||| ||| ||||| | |||||||| || || ||  | |||||||| ||||| || |||||||||||||| ||||| || ||| | ||||||||      
T  28751 tatggacattatgagtataaggtgatgcctttcggtgttactaatgcgcctggtgtatttatggagtatatgaacagaattttccatgcctatctggata 28652  T
Q  126 gttttgtggtggtgtttatagatgatat 153  Q
      |||||||| |||||||| ||||||||    
T  28651 aatttgtggttgtgtttattgatgatat 28624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 14838 - 14989
Alignment:
Q  71 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaat 170  Q
    ||||| ||||| || |||||||| ||||||  ||| || ||| ||| ||||||    ||||| ||||||||||| |||||||||||  | ||||| ||      
T  14838 gcgcctggtgtttttatggagtacatgaatctaatcttccatgcttttctggataagtttgttgtggtgtttattgatgatattttaatctattccaaga 14937  T
Q  171 atgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaagga 222  Q
    ||||||| |||||||| ||||||   || ||||| |||||||| ||||||||    
T  14938 atgaggaggagcatgcagagcatctgagaattgtattgcaagtgttgaagga 14989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 258
Target Start/End: Complemental strand, 53214 - 53039
Alignment:
Q  83 ttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagc 182  Q
    |||||||||||||||||  | || || ||| |||| |||||    |||||||| || ||||| ||||||||| || | ||||| ||   ||| |||||||    
T  53214 ttcatggagtatatgaaccggattttccatgcttacctggataaatttgtggttgtatttattgatgatattctgatttattctaagactgaagaagagc 53115  T
Q  183 atgctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagtt 258  Q
    |||| || |||   | ||||||||||||| | ||||| |||||  |||| | |||||||||||| |||||||||||    
T  53114 atgcagaacatctgaagattgtgttgcaaatattgaaagagaaaaagttgtatgttaagttgtcgaagtgtgagtt 53039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 225
Target Start/End: Complemental strand, 17063 - 16904
Alignment:
Q  66 ccaatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattc 165  Q
    |||||||||||||||| || |||||||| |||||| | || |||||| | ||| | || || || ||||| ||||| || || ||||||||| | || ||    
T  17063 ccaatgcgccaggtgtgtttatggagtacatgaatcgtatttttcatgcgtatttagatcgcttcgtggttgtgttcatcgacgatattttgatatactc 16964  T
Q  166 gaaatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaa 225  Q
     ||   ||| ||||| |||||||||||||  | |||||| |||||||| ||||| |||||    
T  16963 caagactgaagaagaacatgctgagcatttgaagattgttttgcaagtgttgaaagagaa 16904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 50994 - 50939
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctgga 123  Q
    |||||||| ||||| || |||||||||||||||||||| |||||| | ||||||||    
T  50994 aatgcgcctggtgtgtttatggagtatatgaatagaatttttcatgcctatctgga 50939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 54210 - 54257
Alignment:
Q  214 cttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    |||||||||||| ||||| |||| |||||| |||||||||||||||||    
T  54210 cttgaaggagaatcagttgtgtgctaagttatctaagtgtgagttttg 54257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 255
Target Start/End: Original strand, 10863 - 11050
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||||||||| || ||||||||  ||||| | || |||||| | ||| | || || ||  |||| ||||| || |||||||||||| | || || |    
T  10863 aatgcgccaggtgtgtttatggagtacttgaatcgtatttttcatgcgtatttagatcgcttcatggttgtgttcattgatgatattttgatatactcta 10962  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtga 255  Q
    |   ||| ||||| |||||||||||||  |||||||| ||||||||  ||||||||||  || | | || ||||||||| ||||||||    
T  10963 agactgaagaagaacatgctgagcatttgaggattgtcttgcaagtgctgaaggagaagaagctttatgctaagttgtcaaagtgtga 11050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 255
Target Start/End: Original strand, 17055 - 17242
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcga 167  Q
    |||||||||||||| || ||||||||  ||||| | || |||||| | ||| | || || ||  |||| ||||| || |||||||||||| | || || |    
T  17055 aatgcgccaggtgtgtttatggagtacttgaatcgtatttttcatgcgtatttagatcgcttcatggttgtgttcattgatgatattttgatatactcta 17154  T
Q  168 aatatgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtga 255  Q
    |   ||| ||||| |||||||||||||  |||||||| ||||||||  ||||||||||  || | | || ||||||||| ||||||||    
T  17155 agactgaagaagaacatgctgagcatttgaggattgtcttgcaagtgctgaaggagaagaagctttatgctaagttgtcaaagtgtga 17242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1208 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1208
Description:

Target: scaffold1208; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 162
Target Start/End: Original strand, 1811 - 1905
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgta 162  Q
    ||||| ||||| || ||||||||| | ||||||||||| || ||||| || || ||    |||||||| || |||||||||||||||||||||||    
T  1811 aatgcaccaggagtgttcatggagcacatgaatagaattttccatccctacctagataaatttgtggttgtctttatagatgatattttggtgta 1905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 122
Target Start/End: Original strand, 9996 - 10050
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctgg 122  Q
    |||||||||||||| |||||||||||||||||  |||| |||||| ||| |||||    
T  9996 aatgcgccaggtgtgttcatggagtatatgaaccgaatttttcatgcttttctgg 10050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 261
Target Start/End: Original strand, 10979 - 11025
Alignment:
Q  215 ttgaaggagaaccagttatgtgttaagttgtctaagtgtgagttttg 261  Q
    |||||||| ||||||||||||| ||||||||||||||| || |||||    
T  10979 ttgaaggaaaaccagttatgtgctaagttgtctaagtgcgaattttg 11025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2111 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold2111
Description:

Target: scaffold2111; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 117
Target Start/End: Original strand, 709 - 758
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcatcctta 117  Q
    ||||| || ||||| ||||||||||||||||||||||| |||||| ||||    
T  709 aatgcacctggtgtgttcatggagtatatgaatagaatttttcatgctta 758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0827 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0827
Description:

Target: scaffold0827; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 5332 - 5259
Alignment:
Q  26 tatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaa 99  Q
    ||||| || ||| ||||||  |||||||| |||||||| ||||| |||||||| || || ||||||||||||||    
T  5332 tatggtcattatgagtattcggtgatgccttttggagtgtccaacgcgccaggagtgtttatggagtatatgaa 5259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 258
Target Start/End: Complemental strand, 14643 - 14462
Alignment:
Q  77 ggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgagg 176  Q
    ||||| || ||||| || |||||| |||| |||||| | | | |||| ||||| ||||| ||||| || || ||||||||| | || ||||| |  || |    
T  14643 ggtgtgtttatggaatacatgaatcgaatttttcatgcgtttttggatcgtttcgtggttgtgttcatcgacgatattttgatatactcgaagtccgaag 14544  T
Q  177 aagagcatgctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagtt 258  Q
    ||||||||||||||||||  | |||||| ||||||||  |||| |||||  || ||| |  ||| ||||| |||||||||||    
T  14543 aagagcatgctgagcatttgaagattgttttgcaagtgctgaaagagaagaagctatattctaaattgtcaaagtgtgagtt 14462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 255
Target Start/End: Original strand, 11379 - 11548
Alignment:
Q  86 atggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatg 185  Q
    ||||||||||||||| | || || ||| | | | |||| || || |||||||||||||| |||||||||||| | || || ||   ||| ||||| ||||    
T  11379 atggagtatatgaatcgcatcttccatgcctttttggatcggttcgtggtggtgtttatcgatgatattttgatttactccaagactgaagaagaacatg 11478  T
Q  186 ctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtga 255  Q
    ||||||||   | |||||| |||||||| ||||| |||||  | || | || ||| ||||||||||||||    
T  11479 ctgagcatctgaagattgtcttgcaagtgttgaaagagaagaaattttatgctaaattgtctaagtgtga 11548  T

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Target: scaffold1715 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1715
Description:

Target: scaffold1715; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 219
Target Start/End: Complemental strand, 1133 - 985
Alignment:
Q  71 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaat 170  Q
    ||||| ||||| |||||||||||||||||  |||| || ||| ||| |||||||   ||||| || || ||||| |||||||||||  | ||||| ||      
T  1133 gcgcctggtgtgttcatggagtatatgaaccgaattttccatgcttttctggacaaatttgttgttgtatttattgatgatattttaatttattctaaga 1034  T
Q  171 atgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaa 219  Q
    |||| || |||||||| ||||||   || ||||| |||||||| |||||    
T  1033 atgaagaggagcatgcagagcatctgagaattgtattgcaagttttgaa 985  T

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Target: scaffold0476 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 1667 - 1711
Alignment:
Q  68 aatgcgccaggtgtcttcatggagtatatgaatagaatatttcat 112  Q
    |||||||| ||||| ||||||||||||||||| ||||| ||||||    
T  1667 aatgcgcctggtgtgttcatggagtatatgaacagaatttttcat 1711  T

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Target: scaffold0149 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 258
Target Start/End: Original strand, 5490 - 5662
Alignment:
Q  86 atggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatg 185  Q
    ||||||||||||||  |||| || ||| ||||||||||    |||||||| |||||||| ||||| || ||| | ||||| ||   ||| ||||||||||    
T  5490 atggagtatatgaaccgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttgatttattcaaagactgaagaagagcatg 5589  T
Q  186 ctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagtt 258  Q
    | || |||   | ||||||||||||||| ||||| |||||  |||| | ||  |||||||| || ||||||||    
T  5590 cagaacatctgaagattgtgttgcaagtgttgaaagagaagaagttgtatgccaagttgtcaaaatgtgagtt 5662  T

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Target: scaffold0149; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 258
Target Start/End: Original strand, 9921 - 10093
Alignment:
Q  86 atggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatg 185  Q
    ||||||||||||||  |||| || ||| ||||||||||    |||||||| |||||||| ||||| || ||| | ||||| ||   ||| ||||||||||    
T  9921 atggagtatatgaaccgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttgatttattcaaagactgaagaagagcatg 10020  T
Q  186 ctgagcattaaaggattgtgttgcaagtcttgaaggagaaccagttatgtgttaagttgtctaagtgtgagtt 258  Q
    | || |||   | ||||||||||||||| ||||| |||||  |||| | ||  |||||||| || ||||||||    
T  10021 cagaacatctgaagattgtgttgcaagtgttgaaagagaagaagttgtatgccaagttgtcaaaatgtgagtt 10093  T

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Target: scaffold0054 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 219
Target Start/End: Original strand, 64633 - 64781
Alignment:
Q  71 gcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtggtgtttatagatgatattttggtgtattcgaaat 170  Q
    ||||| ||||| || ||||||||||||||  |||| || ||| ||||||||||    |||||||| |||||||| ||||| || ||  | ||||| ||      
T  64633 gcgcctggtgtgtttatggagtatatgaaccgaattttccatgcttatctggataaatttgtggttgtgtttattgatgacatcttaatttattcaaaga 64732  T
Q  171 atgaggaagagcatgctgagcattaaaggattgtgttgcaagtcttgaa 219  Q
     ||| ||||||||||| ||||||   | ||||||||||||||| |||||    
T  64733 ctgaagaagagcatgcagagcatctgaagattgtgttgcaagtgttgaa 64781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 186
Target Start/End: Complemental strand, 103459 - 103299
Alignment:
Q  26 tatggacactataagtattatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggacc 125  Q
    |||||||||||| ||||| | |||||||| || || ||  | |||||||||||||| || |||||||  |||||| | || |||||| | | | |||| |    
T  103459 tatggacactatgagtataaagtgatgcctttcggtgttgcaaatgcgccaggtgtgtttatggagtgcatgaatcgcatttttcatgcatttttggatc 103360  T
Q  126 gttttgtggtggtgtttatagatgatattttggtgtattcgaaatatgaggaagagcatgc 186  Q
    |||| ||||| || || || |||||||||||| | || || || | ||||||||| |||||    
T  103359 gtttcgtggtagtattcatcgatgatattttgatttactccaagtctgaggaagaacatgc 103299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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